Package evaluation to test ApproxManifoldProducts on Julia 1.14.0-DEV.2637 (b1f508acef*) started at 2026-07-13T02:11:36.179 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 15.09s ################################################################################ # Installation # Installing ApproxManifoldProducts... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [9bbbb610] + ApproxManifoldProducts v0.15.6 Updating `~/.julia/environments/v1.14/Manifest.toml` [47edcb42] + ADTypes v1.22.2 [7d9f7c33] + Accessors v0.1.45 [79e6a3ab] + Adapt v4.7.0 [66dad0bd] + AliasTables v1.1.3 [9bbbb610] + ApproxManifoldProducts v0.15.6 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.27.0 [d360d2e6] + ChainRulesCore v1.26.1 [944b1d66] + CodecZlib v0.7.8 [3da002f7] + ColorTypes v0.12.1 [5ae59095] + Colors v0.13.1 [38540f10] + CommonSolve v0.2.11 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [a216cea6] + CompoundPeriods v0.5.4 [187b0558] + ConstructionBase v1.6.0 [150eb455] + CoordinateTransformations v0.6.4 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.5 [e2d170a0] + DataValueInterfaces v1.0.0 [b552c78f] + DiffRules v1.16.0 [a0c0ee7d] + DifferentiationInterface v0.7.20 [b5cc3c7e] + DistributedFactorGraphs v0.29.0 [31c24e10] + Distributions v0.25.129 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.7 [e2ba6199] + ExprTools v0.1.10 [5789e2e9] + FileIO v1.19.0 [1a297f60] + FillArrays v1.16.0 [6a86dc24] + FiniteDiff v2.32.0 ⌅ [53c48c17] + FixedPointNumbers v0.8.6 [46192b85] + GPUArraysCore v0.2.0 [a0844989] + Gamma v1.1.0 [86223c79] + Graphs v1.14.0 [34004b35] + HypergeometricFunctions v0.3.29 [d25df0c9] + Inflate v0.1.5 [842dd82b] + InlineStrings v1.4.5 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.8.0 ⌃ [682c06a0] + JSON v1.5.0 [2c470bb0] + Kronecker v0.5.5 [1fad7336] + LazyStack v0.1.3 [6774de46] + LieGroups v0.1.11 [d3d80556] + LineSearches v7.7.1 [7a12625a] + LinearMaps v3.11.4 [2ab3a3ac] + LogExpFunctions v1.0.1 [6c6e2e6c] + MIMEs v1.1.0 [1914dd2f] + MacroTools v0.5.16 [af67fdf4] + ManifoldDiff v0.4.5 [1cead3c2] + Manifolds v0.11.28 [3362f125] + ManifoldsBase v2.5.0 [99c1a7ee] + MatrixEquations v2.6.2 [e1d29d7a] + Missings v1.2.0 [78c3b35d] + Mocking v0.8.1 [d41bc354] + NLSolversBase v8.0.0 [77ba4419] + NaNMath v1.1.4 [356022a1] + NamedDims v1.2.3 [429524aa] + Optim v2.2.1 ⌅ [bac558e1] + OrderedCollections v1.8.2 [90014a1f] + PDMats v0.11.40 [69de0a69] + Parsers v2.8.6 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.3 [94ee1d12] + Quaternions v0.7.7 [c1ae055f] + RealDot v0.1.0 [3cdcf5f2] + RecipesBase v1.3.4 ⌅ [731186ca] + RecursiveArrayTools v3.54.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [f2b01f46] + Roots v3.0.4 [6038ab10] + Rotations v1.7.1 [7e49a35a] + RuntimeGeneratedFunctions v0.5.22 [6c6a2e73] + Scratch v1.3.0 [efcf1570] + Setfield v1.1.2 [699a6c99] + SimpleTraits v0.9.6 [47aef6b3] + SimpleWeightedGraphs v1.5.1 [a2af1166] + SortingAlgorithms v1.2.3 [276daf66] + SpecialFunctions v2.8.0 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.12 [4c63d2b9] + StatsFuns v2.2.0 [5e0ebb24] + Strided v2.6.1 [4db3bf67] + StridedViews v0.5.2 ⌅ [ec057cc2] + StructUtils v2.7.0 [2efcf032] + SymbolicIndexingInterface v0.3.51 [dc5dba14] + TZJData v1.5.0+2025b [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.13.0 [02d47bb6] + TensorCast v0.4.9 [f269a46b] + TimeZones v1.22.2 [bdfc003b] + TimesDates v0.3.3 [3bb67fe8] + TranscodingStreams v0.11.3 [24ddb15e] + TransmuteDims v0.1.17 [bc48ee85] + Tullio v0.3.9 [9d95972d] + TupleTools v1.6.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [0dad84c5] + ArgTools v1.2.0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [8bf52ea8] + CRC32c v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.5+2 [deac9b47] + LibCURL_jll v8.21.0+0 [e37daf67] + LibGit2_jll v1.9.4+0 [29816b5a] + LibSSH2_jll v1.11.101+0 [14a3606d] + MozillaCACerts_jll v2026.5.14 [4536629a] + OpenBLAS_jll v0.3.33+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.7+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.69.0+0 [3f19e933] + p7zip_jll v17.8.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 5.55s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling project... 21.2 s ✓ ApproxManifoldProducts 1 dependency successfully precompiled in 24 seconds. 226 already precompiled. Precompilation completed after 49.98s ################################################################################ # Testing # Testing ApproxManifoldProducts Status `/tmp/jl_reWCVc/Project.toml` [9bbbb610] ApproxManifoldProducts v0.15.6 [fbb218c0] BSON v0.3.9 [5ae59095] Colors v0.13.1 [150eb455] CoordinateTransformations v0.6.4 [a93c6f00] DataFrames v1.8.2 [b5cc3c7e] DistributedFactorGraphs v0.29.0 [31c24e10] Distributions v0.25.129 [ffbed154] DocStringExtensions v0.9.5 [0f8b85d8] JSON3 v1.14.3 [6774de46] LieGroups v0.1.11 [1cead3c2] Manifolds v0.11.28 [3362f125] ManifoldsBase v2.5.0 [429524aa] Optim v2.2.1 [90014a1f] PDMats v0.11.40 ⌅ [731186ca] RecursiveArrayTools v3.54.0 [6038ab10] Rotations v1.7.1 [90137ffa] StaticArrays v1.9.18 [10745b16] Statistics v1.11.1 [02d47bb6] TensorCast v0.4.9 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.14.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [44cfe95a] Pkg v1.14.0 [9a3f8284] Random v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 Status `/tmp/jl_reWCVc/Manifest.toml` [47edcb42] ADTypes v1.22.2 [7d9f7c33] Accessors v0.1.45 [79e6a3ab] Adapt v4.7.0 [66dad0bd] AliasTables v1.1.3 [9bbbb610] ApproxManifoldProducts v0.15.6 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.27.0 [fbb218c0] BSON v0.3.9 [d360d2e6] ChainRulesCore v1.26.1 [944b1d66] CodecZlib v0.7.8 [3da002f7] ColorTypes v0.12.1 [5ae59095] Colors v0.13.1 [38540f10] CommonSolve v0.2.11 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [a216cea6] CompoundPeriods v0.5.4 [187b0558] ConstructionBase v1.6.0 [150eb455] CoordinateTransformations v0.6.4 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.2 [864edb3b] DataStructures v0.19.5 [e2d170a0] DataValueInterfaces v1.0.0 [b552c78f] DiffRules v1.16.0 [a0c0ee7d] DifferentiationInterface v0.7.20 [b5cc3c7e] DistributedFactorGraphs v0.29.0 [31c24e10] Distributions v0.25.129 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.7 [e2ba6199] ExprTools v0.1.10 [5789e2e9] FileIO v1.19.0 [1a297f60] FillArrays v1.16.0 [6a86dc24] FiniteDiff v2.32.0 ⌅ [53c48c17] FixedPointNumbers v0.8.6 [46192b85] GPUArraysCore v0.2.0 [a0844989] Gamma v1.1.0 [86223c79] Graphs v1.14.0 [34004b35] HypergeometricFunctions v0.3.29 [d25df0c9] Inflate v0.1.5 [842dd82b] InlineStrings v1.4.5 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.8.0 ⌃ [682c06a0] JSON v1.5.0 [0f8b85d8] JSON3 v1.14.3 [2c470bb0] Kronecker v0.5.5 [b964fa9f] LaTeXStrings v1.4.0 [1fad7336] LazyStack v0.1.3 [6774de46] LieGroups v0.1.11 [d3d80556] LineSearches v7.7.1 [7a12625a] LinearMaps v3.11.4 [2ab3a3ac] LogExpFunctions v1.0.1 [6c6e2e6c] MIMEs v1.1.0 [1914dd2f] MacroTools v0.5.16 [af67fdf4] ManifoldDiff v0.4.5 [1cead3c2] Manifolds v0.11.28 [3362f125] ManifoldsBase v2.5.0 [99c1a7ee] MatrixEquations v2.6.2 [e1d29d7a] Missings v1.2.0 [78c3b35d] Mocking v0.8.1 [d41bc354] NLSolversBase v8.0.0 [77ba4419] NaNMath v1.1.4 [356022a1] NamedDims v1.2.3 [429524aa] Optim v2.2.1 ⌅ [bac558e1] OrderedCollections v1.8.2 [90014a1f] PDMats v0.11.40 [69de0a69] Parsers v2.8.6 [2dfb63ee] PooledArrays v1.4.3 [85a6dd25] PositiveFactorizations v0.2.4 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [08abe8d2] PrettyTables v3.4.0 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.4.0 [1fd47b50] QuadGK v2.11.3 [94ee1d12] Quaternions v0.7.7 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 ⌅ [731186ca] RecursiveArrayTools v3.54.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [f2b01f46] Roots v3.0.4 [6038ab10] Rotations v1.7.1 [7e49a35a] RuntimeGeneratedFunctions v0.5.22 [6c6a2e73] Scratch v1.3.0 [91c51154] SentinelArrays v1.4.10 [efcf1570] Setfield v1.1.2 [699a6c99] SimpleTraits v0.9.6 [47aef6b3] SimpleWeightedGraphs v1.5.1 [a2af1166] SortingAlgorithms v1.2.3 [276daf66] SpecialFunctions v2.8.0 [90137ffa] StaticArrays v1.9.18 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.12 [4c63d2b9] StatsFuns v2.2.0 [5e0ebb24] Strided v2.6.1 [4db3bf67] StridedViews v0.5.2 [892a3eda] StringManipulation v0.4.4 [856f2bd8] StructTypes v1.11.0 ⌅ [ec057cc2] StructUtils v2.7.0 [2efcf032] SymbolicIndexingInterface v0.3.51 [dc5dba14] TZJData v1.5.0+2025b [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.13.0 [02d47bb6] TensorCast v0.4.9 [f269a46b] TimeZones v1.22.2 [bdfc003b] TimesDates v0.3.3 [3bb67fe8] TranscodingStreams v0.11.3 [24ddb15e] TransmuteDims v0.1.17 [bc48ee85] Tullio v0.3.9 [9d95972d] TupleTools v1.6.0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [0dad84c5] ArgTools v1.2.0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [8bf52ea8] CRC32c v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.14.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.13.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.5.5+2 [deac9b47] LibCURL_jll v8.21.0+0 [e37daf67] LibGit2_jll v1.9.4+0 [29816b5a] LibSSH2_jll v1.11.101+0 [14a3606d] MozillaCACerts_jll v2026.5.14 [4536629a] OpenBLAS_jll v0.3.33+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.7+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.69.0+0 [3f19e933] p7zip_jll v17.8.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... string(hr) = "HomotopyReprLive{TestTranslation1, Nothing}(BinaryTruncFixedDepth{3}(), ConcentratedGaussianKernel(d=1,Σ^2=[1.0]); det(T-I)=0.0\n, TestTranslation1(), nothing)" string(hr) = "HomotopyReprLive{TranslationGroup{ℝ, ManifoldsBase.TypeParameter{Tuple{3}}}, Tuple{Int64, Int64}}(BinaryTruncFixedDepth{3}(), ConcentratedGaussianKernel(d=1,Σ^2=[1.0]); det(T-I)=0.0\n, TranslationGroup(3; field=ℝ), (1, 3))" ┌ Error: Missing SO(2) vector transport numerical verify tests └ @ Main ~/.julia/packages/ApproxManifoldProducts/wr91t/test/testLieFundamentals.jl:42 Test Summary: | Pass Total Time SO(2) Vector transport (w curvature) via Jacobians and Lie adjoints | 3 3 4.8s ┌ Warning: TODO find Manifolds operation equivalent to Mahony 2024, perhaps `vector_transport_along`? └ @ Main ~/.julia/packages/ApproxManifoldProducts/wr91t/test/testLieFundamentals.jl:132 Test Summary: | Pass Total Time SO(3) Vector transport (w curvature) via Jacobians and Lie adjoints | 10 10 13.0s ┌ Error: Missing SE(2) vector transport numerical verify tests └ @ Main ~/.julia/packages/ApproxManifoldProducts/wr91t/test/testLieFundamentals.jl:168 Test Summary: | Pass Total Time SE(2) Vector transport (w curvature) via Jacobians and Lie adjoints | 2 2 6.0s ┌ Error: Missing SE(3) vector transport numerical verify tests └ @ Main ~/.julia/packages/ApproxManifoldProducts/wr91t/test/testLieFundamentals.jl:195 Test Summary: | Pass Total Time SE(3) Vector transport (w curvature) via Jacobians and Lie adjoints | 1 1 3.8s Test Summary: | Pass Total Time (Lie Group) on-manifold Gaussian product SO(3), [Ge, van Goor, Mahony, 2024] | 4 4 20.1s Test Summary: | Pass Total Time test MF.jl conventions | 10 10 5.8s Test Summary: | Pass Total Time HomotopyDensity 1D unbalanced tree construction, left and sorted | 32 32 4.1s Test Summary: | Pass Total Time HomotopyDensity 1D unbalanced tree construction, left but shuffled | 34 34 0.0s Test Summary: | Pass Total Time HomotopyDensity 1D unbalanced tree construction, right | 33 33 0.0s ┌ Error: expand sorting test to trivial TranslateGroup(2) with pts = [[*; 0], ...] producing same mtree.structure[1] └ @ Main ~/.julia/packages/ApproxManifoldProducts/wr91t/test/manellic/testManifoldTreeConstr.jl:379 ┌ Error: expand sorting test to trivial TranslateGroup(2) with pts = [[0; *], ...] producing same mtree.structure[1] └ @ Main ~/.julia/packages/ApproxManifoldProducts/wr91t/test/manellic/testManifoldTreeConstr.jl:380 Test Summary: | Pass Total Time HomotopyDensity 1D basic sorting of points with shuffle | 13 13 3.6s ┌ Warning: manikde!(manif, pts; partial, kw...) is deprecated, use HomotopyDensity_legacy(manif, pts; partial, kw...) instead └ @ ApproxManifoldProducts ~/.julia/packages/ApproxManifoldProducts/wr91t/src/Deprecated.jl:157 Test Summary: | Pass Total Time HomotopyDensity construction 1D | 393 393 14.4s ┌ Warning: `HomotopyDensity_legacy(; partial::Union{Nothing, <:Tuple, AbstractVector{<:Integer}} = nothing, manifold::M, points::Vector{P}, kernel_bw = nothing, kw...) where {M, P}` is deprecated, use `HomotopyDensity_legacy(manifold, points; partial, kernel_bw, kw...)` instead. │ caller = top-level scope at testManifoldTreeConstr.jl:542 └ @ Core ~/.julia/packages/ApproxManifoldProducts/wr91t/test/manellic/testManifoldTreeConstr.jl:542 Test Summary: | Pass Total Time test Manellic tree utilities w skeleton object | 19 19 6.0s _ax_ERR = (log(SpecialOrthogonalGroup(2), r_R_ax_' * r_R_ax))[1, 2] = -0.010447208326650078 testval = isapprox(0, _ax_ERR; atol = 8 / length(ax_CC)) = true Test Summary: | Pass Total Time test HomotopyDensity construction | 405 405 18.0s ┌ Warning: manikde!(manif, pts; partial, kw...) is deprecated, use HomotopyDensity_legacy(manif, pts; partial, kw...) instead └ @ ApproxManifoldProducts ~/.julia/packages/ApproxManifoldProducts/wr91t/src/Deprecated.jl:157 Test Summary: | Pass Total Time HomotopyDensity 1D basic construction and evaluations | 110 110 21.5s Test Summary: | Pass Broken Total Time Test evaluate ConcentratedGaussianKernel | 9 2 11 10.0s y_pdf = 0.6349363593424094 ┌ Warning: soft test failure for approx function vs. true Normal density function evaluation └ @ Main ~/.julia/packages/ApproxManifoldProducts/wr91t/test/manellic/testManifoldTreeConstr.jl:926 Test Summary: | Pass Broken Total Time Basic HomotopyDensity manifolds construction and evaluations | 2 1 3 20.5s ┌ Error: FIXME: add test building Manellic tree on edge case where all points are 0 with defined bandwidth └ @ Main ~/.julia/packages/ApproxManifoldProducts/wr91t/test/manellic/testTreeEvaluation.jl:23 ┌ Error: expectedLogL for different number of test points not working yet. └ @ Main ~/.julia/packages/ApproxManifoldProducts/wr91t/test/manellic/testTreeEvaluation.jl:46 ┌ Warning: manikde!(manif, pts; partial, kw...) is deprecated, use HomotopyDensity_legacy(manif, pts; partial, kw...) instead └ @ ApproxManifoldProducts ~/.julia/packages/ApproxManifoldProducts/wr91t/src/Deprecated.jl:157 Test Summary: | Pass Total Time Manellic basic evaluation test 1D | 6 6 6.4s Test Summary: | Pass Total Time Manellic tree bandwidth evaluation | 4 4 1.1s Test Summary: | Pass Total Time Manellic tree evaluation check for NaN | 2 2 0.8s Test Summary: | Pass Total Time test symmetry of Manifolds.distance | 4 4 3.5s Test Summary: | Pass Total Time test updating of beliefs | 1 1 18.9s Test Summary: | Pass Broken Total Time Test basic MKD statistics | 5 1 6 41.9s Test Summary: | Pass Total Time Test mmd distance between Euclidean beliefs | 1 1 7.3s Test Summary: | Pass Total Time Test mmd distance between 2D Euclidean beliefs | 1 1 0.4s HomotopyDensity{ partial = nothing, M = LieGroup{ℝ, RightSemidirectProductGroupOperation{AdditionGroupOperation, MatrixMultiplicationGroupOperation, LeftMultiplicationGroupAction, ActionActsOnRight}, ProductManifold{ℝ, Tuple{Euclidean{ℝ, ManifoldsBase.TypeParameter{Tuple{3}}}, Rotations{ManifoldsBase.TypeParameter{Tuple{3}}}}}}, P = ArrayPartition{Float64, Tuple{Vector{Float64}, Matrix{Float64}}} N = 50 }( .points : ArrayPartition{Float64, Tuple{Vector{Float64}, Matrix{Float64}}}(([0.06522721473028056, -0.47613064104249936, 0.5812723304554892], [0.9774465505704625 0.18515499954586093 -0.10156705627848303; -0.20120601228771914 0.962570410666592 -0.1815883948065591; 0.06414344391423421 0.1979288525008944 0.9781154267010109])) ... ArrayPartition{Float64, Tuple{Vector{Float64}, Matrix{Float64}}}(([0.1974835095779135, 0.3494281403227528, -0.21317706300738712], [0.9922046098483761 0.11653652578327191 -0.04415031544617393; -0.12016353671148965 0.9885633234902894 -0.0911223347748506; 0.033026302254693066 0.09571725867469391 0.9948605277882842])) .weights : 0.02 ... 0.02 .structure[1][-]: 12 ... 35 .tkernels[1]: ::HT ConcentratedGaussianKernel(d=6,Σ^2=[0.268...]); det(T-I)=1.02 (trunc) : BinaryTruncFixedDepth{3}() (blncd) : true : _wip_ .lkernels[) Npts: 50 dims: 6 prtl: nothing ipc: [0.0, 0.0, 0.0, 0.0, 0.0, 0.0] mean: ---- ) Test Summary: | Pass Total Time Test isapprox function on basic SpecialEuclideanGroup(3; variant = :right) | 10 10 2m42.3s Test Summary: | Pass Total Time HomotopyDensity kernel bandwidth 1D LOO evaluation/entropy checks | 3 3 4.0s best_cov = Optim.minimizer(res) = 0.5793239929494921 Test Summary: | Pass Total Time HomotopyDensity bandwidth optimization 1D section search | 6 6 18.0s ┌ Warning: Bandwidth optimization test seems weak with 0.4 tolerance. └ @ Main ~/.julia/packages/ApproxManifoldProducts/wr91t/test/manellic/testTreeEntropyBandwidth.jl:166 Test Summary: | Pass Total Time HomotopyDensity all up construction with bandwith optimization | 1 1 11.9s Test Summary: | Pass Total Time HomotopyDensity bandwith optimization as variance or deviation | 5 5 6.7s 10.144175 seconds (17.95 M allocations: 687.713 MiB, 2.18% gc time, 63.72% compilation time) best_cov = abs.(Optim.minimizer(res)) = [0.7065885053971386, 0.5723243826268006] Test Summary: | Pass Total Time Multidimensional LOOCV bandwidth optimization, LieGroups.TranslationGroup(2) | 4 4 18.5s 14.549678 seconds (58.18 M allocations: 2.464 GiB, 3.80% gc time, 22.80% compilation time) best_cov = abs.(Optim.minimizer(res)) = [0.7661478572350329, 0.3619802356725762, 0.07998253528607382] Test Summary: | Pass Total Time Multidimensional LOOCV bandwidth optimization, SpecialEuclideanGroup(2; variant = :right) | 6 6 38.5s 38.024089 seconds (170.75 M allocations: 12.052 GiB, 5.12% gc time, 7.35% compilation time) best_cov = abs.(Optim.minimizer(res)) = [0.7021727269715818, 0.6073878049251336, 0.6850880074121921, 0.07516726771715043, 0.0686197649685003, 0.10081053717281858] Test Summary: | Pass Total Time Multidimensional LOOCV bandwidth optimization, SpecialEuclideanGroup(3; variant = :right) | 5 5 1m33.8s Test Summary: | Pass Total Time test getManifoldPartial on Euclidean(N) | 6 6 1.1s Test Summary: | Pass Total Time test getManifoldPartial on Circle() | 4 4 1.3s Test Summary: | Pass Total Time test getManifoldPartial on Rotations(2) | 4 4 0.4s Test Summary: | Pass Total Time test getManifoldPartial on LieGroups.ProductLieGroup | 20 20 3.7s Test Summary: | Pass Total Time test getManifoldPartial on SpecialEuclideanGroup(2; variant = :right) | 20 20 0.3s ┌ Error: Must fix Sphere(2) partial test └ @ Main ~/.julia/packages/ApproxManifoldProducts/wr91t/test/testManifoldPartial.jl:148 Test Summary: | Broken Total Time Reminder, getManifoldPartial on Sphere(2) [TBD] | 1 1 0.7s ┌ Error: restore tests for manikde partials └ @ Main ~/.julia/packages/ApproxManifoldProducts/wr91t/test/testManifoldPartial.jl:176 Test Summary: | Pass Total Time test replace (not replace!) overloads full and partial/marginal | 1 1 32.7s Test Summary: | Pass Total Time test getPoints of marginal with representation on LieGroups.ProductLieGroup | 3 3 22.5s Test Summary: | Pass Total Time test getPoints of marginal with representation on SE2 | 3 3 22.6s ┌ Error: Unreliable permute test, FIXME for consistent results └ @ Main ~/.julia/packages/ApproxManifoldProducts/wr91t/test/testManifoldPartial.jl:341 Test Summary: | Pass Total Time Tree reconstruction of 1D data as a either 2->[x *] or [* y] partials | 12 12 17.1s Test Summary: | Pass Broken Total Time test marginal of marginal (partial) helper | 75 1 76 23.9s Test Summary: | Pass Total Time Utility function signature consistency checks, calcProductGaussians | 8 8 17.7s ┌ Warning: Brute force product test overlap 100.0% └ @ Main ~/.julia/packages/ApproxManifoldProducts/wr91t/test/manellic/testTreeKernelProducts.jl:132 Test Summary: | Pass Total Time Test Product the brute force way, MF.SpecialEuclideanGroup(2; variant = :right) | 2 2 34.0s Test Summary: | Pass Total Time Rotated covariance product major axis checks, MF.TranslationGroup(2) | 1 1 10.7s mean(kerpq) = ArrayPartition{Float64, Tuple{Vector{Float64}, Matrix{Float64}}}(([0.0, 0.0], [0.866025403784439 -0.5000000000000001; 0.5000000000000001 0.866025403784439])) Test Summary: | Pass Total Time Rotated covariance product major axis checks, MF.SpecialEuclideanGroup(2; variant = :right) | 1 1 0.6s Test Summary: | Pass Total Time Test utility functions for Gaussian products, MF.TranslationGroup(1) | 4 4 0.0s [ Info: Leaves only label sampling version (Gibbs), LieGroups.TranslationGroup(1) [ Info: Multi-scale label sampling version (Gibbs), LieGroups.TranslationGroup(1) Test Summary: | Pass Total Time Product of two Homotopy Densities, Sequential Gibbs, LieGroups.TranslationGroup(1) | 17 17 14.3s ┌ Warning: `HomotopyDensity_legacy(; partial::Union{Nothing, <:Tuple, AbstractVector{<:Integer}} = nothing, manifold::M, points::Vector{P}, kernel_bw = nothing, kw...) where {M, P}` is deprecated, use `HomotopyDensity_legacy(manifold, points; partial, kernel_bw, kw...)` instead. │ caller = buildTree_Manellic!(statekind::TranslationGroup{ℝ, ManifoldsBase.TypeParameter{Tuple{2}}}, r_ker::Vector{ConcentratedGaussianKernel}; N::Int64, weights::Vector{Float64}, kernel::Core.TypeEgal{ConcentratedGaussianKernel}, kernel_bw::Nothing) at BuildHomotopyTree.jl:135 └ @ ApproxManifoldProducts ~/.julia/packages/ApproxManifoldProducts/wr91t/src/services/BuildHomotopyTree.jl:135 Test Summary: | Pass Total Time Multi-scale label sampling version (Gibbs), LieGroups.TranslationGroup(2) | 1 1 21.4s Test Summary: | Total Time Wrapper function for multi-scale label sampling version (Gibbs), LieGroups.TranslationGroup(2) | 0 0.0s Test Summary: | Pass Total Time Test utility functions for Gaussian products, LieGroups.TranslationGroup(1) | 4 4 0.0s Test Summary: | Pass Total Time Test utility functions for Gaussian products, LieGroups.TranslationGroup(2) | 2 2 4.7s [ Info: Leaves only label sampling version (Gibbs), LieGroups.TranslationGroup(1) [ Info: Multi-scale label sampling version (Gibbs), LieGroups.TranslationGroup(1) Test Summary: | Pass Total Time Product of two Manellic beliefs, Sequential Gibbs, LieGroups.TranslationGroup(1) | 19 19 3.2s Test Summary: | Pass Total Time Multi-scale label sampling version (Gibbs), LieGroups.TranslationGroup(2) | 1 1 6.3s ┌ Warning: Weak test on product of low number of kernels └ @ Main ~/.julia/packages/ApproxManifoldProducts/wr91t/test/testBasicManiProduct.jl:277 ┌ Warning: `HomotopyDensity_legacy(; partial::Union{Nothing, <:Tuple, AbstractVector{<:Integer}} = nothing, manifold::M, points::Vector{P}, kernel_bw = nothing, kw...) where {M, P}` is deprecated, use `HomotopyDensity_legacy(manifold, points; partial, kernel_bw, kw...)` instead. │ caller = buildTree_Manellic!(statekind::TranslationGroup{ℝ, ManifoldsBase.TypeParameter{Tuple{2}}}, r_ker::Vector{ConcentratedGaussianKernel}; N::Int64, weights::Vector{Float64}, kernel::Type, kernel_bw::Nothing) at BuildHomotopyTree.jl:135 └ @ ApproxManifoldProducts ~/.julia/packages/ApproxManifoldProducts/wr91t/src/services/BuildHomotopyTree.jl:135 sl = [[11, 14], [12, 9], [8, 13], [15, 10], [9, 11], [13, 11], [14, 8], [15, 10]] Basic product for a balanced tree with 8 leaves: Test Failed at /home/pkgeval/.julia/packages/ApproxManifoldProducts/wr91t/test/testutils.jl:78 Expression: 0.5N < hits Evaluated: 4.0 < 3 Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:784 [inlined] [2] directProductGaussianTestHelper(M::TranslationGroup{ℝ, ManifoldsBase.TypeParameter{Tuple{2}}}, P1::HomotopyDensityLive{HomotopyReprLive{TranslationGroup{ℝ, ManifoldsBase.TypeParameter{Tuple{2}}}, Nothing}, Vector{Float64}, Vector{Float64}, Matrix{Float64}, SMatrix{2, 2, Float64, 4}}, P2::HomotopyDensityLive{HomotopyReprLive{TranslationGroup{ℝ, ManifoldsBase.TypeParameter{Tuple{2}}}, Nothing}, Vector{Float64}, Vector{Float64}, Matrix{Float64}, SMatrix{2, 2, Float64, 4}}, P12::HomotopyDensityLive{HomotopyReprLive{TranslationGroup{ℝ, ManifoldsBase.TypeParameter{Tuple{2}}}, Nothing}, Vector{Float64}, Vector{Float64}, Matrix{Float64}, SMatrix{2, 2, Float64, 4}}, sl::Vector{Vector{Int64}}, pts1::Vector{Vector{Float64}}, pts2::Vector{Vector{Float64}}, N::Int64) @ Main ~/.julia/packages/ApproxManifoldProducts/wr91t/test/testutils.jl:78 [3] top-level scope @ ~/.julia/packages/ApproxManifoldProducts/wr91t/test/testBasicManiProduct.jl:253 [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [5] macro expansion @ ~/.julia/packages/ApproxManifoldProducts/wr91t/test/testBasicManiProduct.jl:360 [inlined] Test Summary: | Pass Fail Total Time Basic product for a balanced tree with 8 leaves | 35 1 36 31.2s RNG of the outermost testset: Xoshiro(0x5afadd5286120116, 0x4b79d4883715e5fc, 0xdc527939181b1b91, 0x6bd75a424f48f43c, 0x7de830d8ced9ea83) ERROR: LoadError: Some tests did not pass: 35 passed, 1 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/ApproxManifoldProducts/wr91t/test/testBasicManiProduct.jl:250 in expression starting at /home/pkgeval/.julia/packages/ApproxManifoldProducts/wr91t/test/runtests.jl:28 Testing failed after 1065.44s ERROR: LoadError: Package ApproxManifoldProducts errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3247 [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] [7] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [8] include(mod::Module, _path::String) @ Base Base.jl:325 [9] exec_options(opts::Base.JLOptions) @ Base client.jl:355 [10] _start() @ Base client.jl:596 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 1176.4s: package has test failures