Package evaluation to test CellBase on Julia 1.14.0-DEV.2621 (b841d233e9*) started at 2026-07-09T17:29:26.402 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 16.36s ################################################################################ # Installation # Installing CellBase... Resolving package versions... Installed spglib_jll ───────── v1.16.5+0 Installed OrderedCollections ─ v1.8.2 Installed AtomsBase ────────── v0.4.2 Installed CellBase ─────────── v0.6.0 Installed PeriodicTable ────── v1.2.1 Installed ConstructionBase ─── v1.6.0 Installed Statistics ───────── v1.11.1 Installed PrecompileTools ──── v1.3.4 Installed StructHelpers ────── v1.6.0 Installed StaticArraysCore ─── v1.4.4 Installed UnitfulAtomic ────── v1.0.0 Installed Requires ─────────── v1.3.1 Installed StaticArrays ─────── v1.9.18 Installed Parameters ───────── v0.12.3 Installed libcleri_jll ─────── v0.12.1+3 Installed Unitful ──────────── v1.28.0 Installed LLVMOpenMP_jll ───── v21.1.8+0 Installed Spglib ───────────── v0.6.2 Installed Preferences ──────── v1.5.2 Installed ExtXYZ ───────────── v0.2.1 Installed JLLWrappers ──────── v1.8.0 Installed LaTeXStrings ─────── v1.4.0 Installed GZip ─────────────── v0.5.2 Installed extxyz_jll ───────── v0.1.3+0 Installed UnPack ───────────── v1.0.2 Installing 4 artifacts Installed artifact spglib 129.8 KiB Installed artifact LLVMOpenMP 573.0 KiB Installed artifact libcleri 17.6 KiB Installed artifact extxyz 20.9 KiB Updating `~/.julia/environments/v1.14/Project.toml` [01ff7365] + CellBase v0.6.0 Updating `~/.julia/environments/v1.14/Manifest.toml` ⌅ [a963bdd2] + AtomsBase v0.4.2 [01ff7365] + CellBase v0.6.0 [187b0558] + ConstructionBase v1.6.0 ⌅ [352459e4] + ExtXYZ v0.2.1 ⌅ [92fee26a] + GZip v0.5.2 [692b3bcd] + JLLWrappers v1.8.0 [b964fa9f] + LaTeXStrings v1.4.0 ⌅ [bac558e1] + OrderedCollections v1.8.2 ⌅ [d96e819e] + Parameters v0.12.3 [7b2266bf] + PeriodicTable v1.2.1 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [ae029012] + Requires v1.3.1 ⌅ [f761d5c5] + Spglib v0.6.2 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [4093c41a] + StructHelpers v1.6.0 [3a884ed6] + UnPack v1.0.2 [1986cc42] + Unitful v1.28.0 [a7773ee8] + UnitfulAtomic v1.0.0 [1d63c593] + LLVMOpenMP_jll v21.1.8+0 ⌅ [6ecdc6fc] + extxyz_jll v0.1.3+0 [cdc7adba] + libcleri_jll v0.12.1+3 ⌅ [ac4a9f1e] + spglib_jll v1.16.5+0 [0dad84c5] + ArgTools v1.2.0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.5+2 [deac9b47] + LibCURL_jll v8.21.0+0 [e37daf67] + LibGit2_jll v1.9.4+0 [29816b5a] + LibSSH2_jll v1.11.101+0 [14a3606d] + MozillaCACerts_jll v2026.5.14 [4536629a] + OpenBLAS_jll v0.3.33+0 [458c3c95] + OpenSSL_jll v3.5.7+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.69.0+0 [3f19e933] + p7zip_jll v17.8.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 8.45s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling project... 4.7 s ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. Precompiling package dependencies... Precompiling project... 0.8 s ✓ Statistics 0.8 s ✓ ConstructionBase 0.5 s ✓ UnPack 0.7 s ✓ StaticArraysCore 0.8 s ✓ GZip 1.2 s ✓ OrderedCollections 0.6 s ✓ LaTeXStrings 0.8 s ✓ Requires 31.0 s ✓ Unitful 1.3 s ✓ Preferences 0.6 s ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 0.8 s ✓ Parameters 1.9 s ✓ Unitful → PrintfExt 1.9 s ✓ Unitful → ConstructionBaseUnitfulExt 2.0 s ✓ JLLWrappers 1.0 s ✓ PrecompileTools 1.2 s ✓ StructHelpers 6.5 s ✓ UnitfulAtomic 5.2 s ✓ PeriodicTable 1.5 s ✓ LLVMOpenMP_jll 1.1 s ✓ libcleri_jll 12.4 s ✓ StaticArrays 1.3 s ✓ spglib_jll 1.8 s ✓ extxyz_jll 1.7 s ✓ StaticArrays → StaticArraysStatisticsExt 1.4 s ✓ ConstructionBase → ConstructionBaseStaticArraysExt 4.5 s ✓ AtomsBase 2.4 s ✓ Spglib 4.6 s ✓ ExtXYZ 9.6 s ✓ CellBase 30 dependencies successfully precompiled in 102 seconds. 30 already precompiled. Precompilation completed after 132.8s ################################################################################ # Testing # Testing CellBase Status `/tmp/jl_iz76hK/Project.toml` ⌅ [a963bdd2] AtomsBase v0.4.2 [01ff7365] CellBase v0.6.0 ⌅ [352459e4] ExtXYZ v0.2.1 ⌅ [92fee26a] GZip v0.5.2 [b964fa9f] LaTeXStrings v1.4.0 ⌅ [d96e819e] Parameters v0.12.3 [7b2266bf] PeriodicTable v1.2.1 ⌅ [f761d5c5] Spglib v0.6.2 [90137ffa] StaticArrays v1.9.18 [10745b16] Statistics v1.11.1 [1986cc42] Unitful v1.28.0 [37e2e46d] LinearAlgebra v1.14.0 [de0858da] Printf v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_iz76hK/Manifest.toml` ⌅ [a963bdd2] AtomsBase v0.4.2 [01ff7365] CellBase v0.6.0 [187b0558] ConstructionBase v1.6.0 ⌅ [352459e4] ExtXYZ v0.2.1 ⌅ [92fee26a] GZip v0.5.2 [692b3bcd] JLLWrappers v1.8.0 [b964fa9f] LaTeXStrings v1.4.0 ⌅ [bac558e1] OrderedCollections v1.8.2 ⌅ [d96e819e] Parameters v0.12.3 [7b2266bf] PeriodicTable v1.2.1 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [ae029012] Requires v1.3.1 ⌅ [f761d5c5] Spglib v0.6.2 [90137ffa] StaticArrays v1.9.18 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [4093c41a] StructHelpers v1.6.0 [3a884ed6] UnPack v1.0.2 [1986cc42] Unitful v1.28.0 [a7773ee8] UnitfulAtomic v1.0.0 [1d63c593] LLVMOpenMP_jll v21.1.8+0 ⌅ [6ecdc6fc] extxyz_jll v0.1.3+0 [cdc7adba] libcleri_jll v0.12.1+3 ⌅ [ac4a9f1e] spglib_jll v1.16.5+0 [0dad84c5] ArgTools v1.2.0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.14.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.13.0 [9e88b42a] Serialization v1.11.0 [f489334b] StyledStrings v1.13.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.5.5+2 [deac9b47] LibCURL_jll v8.21.0+0 [e37daf67] LibGit2_jll v1.9.4+0 [29816b5a] LibSSH2_jll v1.11.101+0 [14a3606d] MozillaCACerts_jll v2026.5.14 [4536629a] OpenBLAS_jll v0.3.33+0 [458c3c95] OpenSSL_jll v3.5.7+0 [efcefdf7] PCRE2_jll v10.47.0+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.69.0+0 [3f19e933] p7zip_jll v17.8.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Test Summary: | Pass Total Time Minkovski Reduce | 3 3 12.1s Test Summary: | Pass Total Time Cell | 65 65 58.9s Test Summary: | Pass Total Time Site | 9 9 1.1s Test Summary: | Pass Total Time Lattice | 12 12 5.4s Test Summary: | Pass Total Time NL | 34 34 7.9s Test Summary: | Pass Total Time Spglib | 11 11 9.2s Test Summary: | Pass Total Time AtomsBase | 8 8 5.9s Test Summary: | Pass Total Time Hyperdimensional Cells | 23 23 11.3s Test Summary: | Pass Total Time Composition | 24 24 5.4s Test Summary: | Pass Total Time Elemental data | 5 5 0.1s Test Summary: | Pass Total Time Build Functions | 105 105 13.7s Hyperdimensional writers: Test Failed at /home/pkgeval/.julia/packages/CellBase/ety7K/test/io_tests/test_io.jl:121 Expression: parse(Float64, (split(lines[3]))[var"end"]) ≈ 0.25 Evaluated: 0.5 ≈ 0.25 Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:784 [inlined] [2] (::var"#120#121"{Cell{Float64, 4}})(path::String, io::IOStream) @ Main ~/.julia/packages/CellBase/ety7K/test/io_tests/test_io.jl:121 [3] mktemp(fn::var"#120#121"{Cell{Float64, 4}}, parent::String) @ Base.Filesystem file.jl:920 [4] mktemp(fn::Function) @ Base.Filesystem file.jl:918 [5] top-level scope @ ~/.julia/packages/CellBase/ety7K/test/io_tests/test_io.jl:9 [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [7] macro expansion @ ~/.julia/packages/CellBase/ety7K/test/io_tests/test_io.jl:86 [inlined] [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [9] macro expansion @ ~/.julia/packages/CellBase/ety7K/test/io_tests/test_io.jl:116 [inlined] Hyperdimensional writers: Test Failed at /home/pkgeval/.julia/packages/CellBase/ety7K/test/io_tests/test_io.jl:122 Expression: parse(Float64, (split(lines[4]))[var"end"]) ≈ -0.5 Evaluated: 0.6 ≈ -0.5 Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:784 [inlined] [2] (::var"#120#121"{Cell{Float64, 4}})(path::String, io::IOStream) @ Main ~/.julia/packages/CellBase/ety7K/test/io_tests/test_io.jl:122 [3] mktemp(fn::var"#120#121"{Cell{Float64, 4}}, parent::String) @ Base.Filesystem file.jl:920 [4] mktemp(fn::Function) @ Base.Filesystem file.jl:918 [5] top-level scope @ ~/.julia/packages/CellBase/ety7K/test/io_tests/test_io.jl:9 [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [7] macro expansion @ ~/.julia/packages/CellBase/ety7K/test/io_tests/test_io.jl:86 [inlined] [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [9] macro expansion @ ~/.julia/packages/CellBase/ety7K/test/io_tests/test_io.jl:116 [inlined] Test Summary: | Pass Fail Total Time IO | 66 2 68 57.1s SHELX | 10 10 10.5s CELL | 5 5 2.5s POSCAR | 15 15 6.5s Hyperdimensional writers | 12 2 14 32.3s CASTEP | 2 2 0.9s STRU | 22 22 4.2s RNG of the outermost testset: Random.Xoshiro(0x0356b1a61445bc79, 0x683dd9c0ef2271f5, 0x29f820472f4b8a72, 0x2f8cbd6064930ee5, 0x5ac20def8e2c2ed5) ERROR: LoadError: Some tests did not pass: 66 passed, 2 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/CellBase/ety7K/test/io_tests/test_io.jl:8 in expression starting at /home/pkgeval/.julia/packages/CellBase/ety7K/test/runtests.jl:7 Testing failed after 217.01s ERROR: LoadError: Package CellBase errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3247 [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] [7] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [8] include(mod::Module, _path::String) @ Base Base.jl:325 [9] exec_options(opts::Base.JLOptions) @ Base client.jl:355 [10] _start() @ Base client.jl:596 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 410.17s: package has test failures