Package evaluation to test BioFindr on Julia 1.14.0-DEV.2621 (b841d233e9*) started at 2026-07-09T23:48:03.300 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 15.12s ################################################################################ # Installation # Installing BioFindr... Resolving package versions... Installed BioFindr ─ v1.4.0 Updating `~/.julia/environments/v1.14/Project.toml` [77580646] + BioFindr v1.4.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [7d9f7c33] + Accessors v0.1.45 [79e6a3ab] + Adapt v4.7.0 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [13072b0f] + AxisAlgorithms v1.1.0 [77580646] + BioFindr v1.4.0 [324d7699] + CategoricalArrays v1.1.1 [d360d2e6] + ChainRulesCore v1.26.1 [3da002f7] + ColorTypes v0.12.1 [38540f10] + CommonSolve v0.2.9 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.2 [864edb3b] + DataStructures v0.19.5 [e2d170a0] + DataValueInterfaces v1.0.0 [31c24e10] + Distributions v0.25.129 [ffbed154] + DocStringExtensions v0.9.5 [b86e33f2] + FFTA v0.3.1 [1a297f60] + FillArrays v1.16.0 ⌅ [53c48c17] + FixedPointNumbers v0.8.6 [a0844989] + Gamma v1.1.0 [86223c79] + Graphs v1.14.0 [34004b35] + HypergeometricFunctions v0.3.29 [d25df0c9] + Inflate v0.1.5 [842dd82b] + InlineStrings v1.4.5 [18e54dd8] + IntegerMathUtils v0.1.3 [a98d9a8b] + Interpolations v0.16.3 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.8.0 [5ab0869b] + KernelDensity v0.6.12 [b964fa9f] + LaTeXStrings v1.4.0 [2ab3a3ac] + LogExpFunctions v1.0.1 [1914dd2f] + MacroTools v0.5.16 [fa8bd995] + MetaGraphsNext v0.8.0 [e1d29d7a] + Missings v1.2.0 [46d2c3a1] + MuladdMacro v0.2.6 [6fe1bfb0] + OffsetArrays v1.17.0 ⌅ [bac558e1] + OrderedCollections v1.8.2 [90014a1f] + PDMats v0.11.40 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [08abe8d2] + PrettyTables v3.4.0 [27ebfcd6] + Primes v0.5.7 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.3 [c84ed2f1] + Ratios v0.4.5 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [f2b01f46] + Roots v3.0.2 [321657f4] + ScientificTypes v3.3.0 [30f210dd] + ScientificTypesBase v3.1.0 [91c51154] + SentinelArrays v1.4.10 [699a6c99] + SimpleTraits v0.9.6 [a2af1166] + SortingAlgorithms v1.2.3 [276daf66] + SpecialFunctions v2.8.0 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 [64bff920] + StatisticalTraits v3.5.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.12 [4c63d2b9] + StatsFuns v2.2.0 [892a3eda] + StringManipulation v0.4.4 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.13.0 [efce3f68] + WoodburyMatrices v1.1.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.5+2 [4536629a] + OpenBLAS_jll v0.3.33+0 [05823500] + OpenLibm_jll v0.8.7+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 6.06s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling project... 13.5 s ✓ BioFindr 1 dependency successfully precompiled in 16 seconds. 134 already precompiled. Precompilation completed after 42.78s ################################################################################ # Testing # Testing BioFindr Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_Wn5dH7/Project.toml` [77580646] + BioFindr v1.4.0 [324d7699] ↑ CategoricalArrays v0.10.8 ⇒ v1.1.1 [a93c6f00] ↑ DataFrames v1.6.1 ⇒ v1.8.2 [31c24e10] ↑ Distributions v0.25.107 ⇒ v0.25.129 [5ab0869b] ↑ KernelDensity v0.6.8 ⇒ v0.6.12 [321657f4] ↑ ScientificTypes v3.0.2 ⇒ v3.3.0 [276daf66] ↑ SpecialFunctions v2.3.1 ⇒ v2.8.0 [10745b16] ↑ Statistics v1.10.0 ⇒ v1.11.1 [2913bbd2] ↑ StatsBase v0.34.2 ⇒ v0.34.12 [de0858da] ~ Printf ⇒ v1.11.0 [9a3f8284] ~ Random ⇒ v1.11.0 [8dfed614] ~ Test ⇒ v1.11.0 Updating `/tmp/jl_Wn5dH7/Manifest.toml` [7d9f7c33] + Accessors v0.1.45 [79e6a3ab] ↑ Adapt v4.0.1 ⇒ v4.7.0 [66dad0bd] + AliasTables v1.1.3 [77580646] + BioFindr v1.4.0 [49dc2e85] - Calculus v0.5.1 [324d7699] ↑ CategoricalArrays v0.10.8 ⇒ v1.1.1 [d360d2e6] ↑ ChainRulesCore v1.20.1 ⇒ v1.26.1 [3da002f7] ↑ ColorTypes v0.11.5 ⇒ v0.12.1 [38540f10] + CommonSolve v0.2.9 [34da2185] ↑ Compat v4.12.0 ⇒ v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [a93c6f00] ↑ DataFrames v1.6.1 ⇒ v1.8.2 [864edb3b] ↑ DataStructures v0.18.16 ⇒ v0.19.5 [31c24e10] ↑ Distributions v0.25.107 ⇒ v0.25.129 [ffbed154] ↑ DocStringExtensions v0.9.3 ⇒ v0.9.5 [fa6b7ba4] - DualNumbers v0.6.8 [b86e33f2] + FFTA v0.3.1 [7a1cc6ca] - FFTW v1.8.0 [1a297f60] ↑ FillArrays v1.9.3 ⇒ v1.16.0 ⌅ [53c48c17] ↑ FixedPointNumbers v0.8.5 ⇒ v0.8.6 [a0844989] + Gamma v1.1.0 [34004b35] ↑ HypergeometricFunctions v0.3.23 ⇒ v0.3.29 [842dd82b] ↑ InlineStrings v1.4.1 ⇒ v1.4.5 [18e54dd8] + IntegerMathUtils v0.1.3 [a98d9a8b] ↑ Interpolations v0.15.1 ⇒ v0.16.3 [3587e190] + InverseFunctions v0.1.17 [41ab1584] ↑ InvertedIndices v1.3.0 ⇒ v1.3.1 [92d709cd] ↑ IrrationalConstants v0.2.2 ⇒ v0.2.6 [692b3bcd] ↑ JLLWrappers v1.5.0 ⇒ v1.8.0 [5ab0869b] ↑ KernelDensity v0.6.8 ⇒ v0.6.12 [b964fa9f] ↑ LaTeXStrings v1.3.1 ⇒ v1.4.0 [2ab3a3ac] ↑ LogExpFunctions v0.3.26 ⇒ v1.0.1 [fa8bd995] + MetaGraphsNext v0.8.0 [e1d29d7a] ↑ Missings v1.1.0 ⇒ v1.2.0 [46d2c3a1] + MuladdMacro v0.2.6 [77ba4419] - NaNMath v1.0.2 [6fe1bfb0] ↑ OffsetArrays v1.13.0 ⇒ v1.17.0 ⌅ [bac558e1] ↑ OrderedCollections v1.6.3 ⇒ v1.8.2 [90014a1f] ↑ PDMats v0.11.31 ⇒ v0.11.40 [69de0a69] - Parsers v2.8.1 [aea7be01] ↑ PrecompileTools v1.2.0 ⇒ v1.3.4 [21216c6a] ↑ Preferences v1.4.1 ⇒ v1.5.2 [08abe8d2] ↑ PrettyTables v2.3.2 ⇒ v3.4.0 [27ebfcd6] + Primes v0.5.7 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] ↑ QuadGK v2.9.4 ⇒ v2.11.3 [ae029012] ↑ Requires v1.3.0 ⇒ v1.3.1 [79098fc4] ↑ Rmath v0.7.1 ⇒ v0.9.0 [f2b01f46] + Roots v3.0.2 [321657f4] ↑ ScientificTypes v3.0.2 ⇒ v3.3.0 [30f210dd] ↑ ScientificTypesBase v3.0.0 ⇒ v3.1.0 [91c51154] ↑ SentinelArrays v1.4.3 ⇒ v1.4.10 [a2af1166] ↑ SortingAlgorithms v1.2.1 ⇒ v1.2.3 [276daf66] ↑ SpecialFunctions v2.3.1 ⇒ v2.8.0 [90137ffa] ↑ StaticArrays v1.9.2 ⇒ v1.9.18 [1e83bf80] ↑ StaticArraysCore v1.4.2 ⇒ v1.4.4 [64bff920] ↑ StatisticalTraits v3.4.0 ⇒ v3.5.0 [10745b16] ↑ Statistics v1.10.0 ⇒ v1.11.1 [82ae8749] ↑ StatsAPI v1.7.0 ⇒ v1.8.0 [2913bbd2] ↑ StatsBase v0.34.2 ⇒ v0.34.12 [4c63d2b9] ↑ StatsFuns v1.3.0 ⇒ v2.2.0 [892a3eda] ↑ StringManipulation v0.3.4 ⇒ v0.4.4 [bd369af6] ↑ Tables v1.11.1 ⇒ v1.13.0 [efce3f68] ↑ WoodburyMatrices v1.0.0 ⇒ v1.1.0 [f5851436] - FFTW_jll v3.3.10+0 [1d5cc7b8] - IntelOpenMP_jll v2024.0.2+0 [856f044c] - MKL_jll v2024.0.0+0 [c8ffd9c3] - MbedTLS_jll v2.28.2+1 [efe28fd5] ↑ OpenSpecFun_jll v0.5.5+0 ⇒ v0.5.6+0 [f50d1b31] ↑ Rmath_jll v0.4.0+0 ⇒ v0.5.1+0 [0dad84c5] - ArgTools v1.1.1 [56f22d72] ~ Artifacts ⇒ v1.11.0 [2a0f44e3] ~ Base64 ⇒ v1.11.0 [ade2ca70] ~ Dates ⇒ v1.11.0 [8ba89e20] ~ Distributed ⇒ v1.11.0 [f43a241f] - Downloads v1.6.0 [7b1f6079] ~ FileWatching ⇒ v1.11.0 [9fa8497b] ~ Future ⇒ v1.11.0 [b77e0a4c] ~ InteractiveUtils ⇒ v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] - LazyArtifacts [b27032c2] - LibCURL v0.6.4 [76f85450] - LibGit2 [8f399da3] ~ Libdl ⇒ v1.11.0 [37e2e46d] ~ LinearAlgebra ⇒ v1.14.0 [56ddb016] ~ Logging ⇒ v1.11.0 [d6f4376e] ~ Markdown ⇒ v1.11.0 [a63ad114] ~ Mmap ⇒ v1.11.0 [ca575930] - NetworkOptions v1.2.0 [44cfe95a] - Pkg v1.10.0 [de0858da] ~ Printf ⇒ v1.11.0 [3fa0cd96] ~ REPL ⇒ v1.11.0 [9a3f8284] ~ Random ⇒ v1.11.0 [ea8e919c] ↑ SHA v0.7.0 ⇒ v1.13.0 [9e88b42a] ~ Serialization ⇒ v1.11.0 [1a1011a3] ~ SharedArrays ⇒ v1.11.0 [6462fe0b] ~ Sockets ⇒ v1.11.0 [2f01184e] ↑ SparseArrays v1.10.0 ⇒ v1.13.0 [f489334b] + StyledStrings v1.13.0 [a4e569a6] - Tar v1.10.0 [8dfed614] ~ Test ⇒ v1.11.0 [cf7118a7] ~ UUIDs ⇒ v1.11.0 [4ec0a83e] ~ Unicode ⇒ v1.11.0 [e66e0078] ↑ CompilerSupportLibraries_jll v1.0.5+1 ⇒ v1.5.5+2 [deac9b47] - LibCURL_jll v8.4.0+0 [e37daf67] - LibGit2_jll v1.6.4+0 [29816b5a] - LibSSH2_jll v1.11.0+1 [14a3606d] - MozillaCACerts_jll v2023.1.10 [4536629a] ↑ OpenBLAS_jll v0.3.23+2 ⇒ v0.3.33+0 [05823500] ↑ OpenLibm_jll v0.8.1+2 ⇒ v0.8.7+0 [bea87d4a] ↑ SuiteSparse_jll v7.2.1+1 ⇒ v7.10.1+0 [83775a58] - Zlib_jll v1.2.13+1 [8e850b90] ↑ libblastrampoline_jll v5.8.0+1 ⇒ v5.15.0+0 [8e850ede] - nghttp2_jll v1.52.0+1 [3f19e933] - p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_Wn5dH7/Project.toml` [77580646] BioFindr v1.4.0 [324d7699] CategoricalArrays v1.1.1 [a93c6f00] DataFrames v1.8.2 [31c24e10] Distributions v0.25.129 [86223c79] Graphs v1.14.0 [5ab0869b] KernelDensity v0.6.12 [321657f4] ScientificTypes v3.3.0 [276daf66] SpecialFunctions v2.8.0 [10745b16] Statistics v1.11.1 [2913bbd2] StatsBase v0.34.12 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_Wn5dH7/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [7d9f7c33] Accessors v0.1.45 [79e6a3ab] Adapt v4.7.0 [66dad0bd] AliasTables v1.1.3 [ec485272] ArnoldiMethod v0.4.0 [13072b0f] AxisAlgorithms v1.1.0 [77580646] BioFindr v1.4.0 [324d7699] CategoricalArrays v1.1.1 [d360d2e6] ChainRulesCore v1.26.1 [3da002f7] ColorTypes v0.12.1 [38540f10] CommonSolve v0.2.9 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.2 [864edb3b] DataStructures v0.19.5 [e2d170a0] DataValueInterfaces v1.0.0 [31c24e10] Distributions v0.25.129 [ffbed154] DocStringExtensions v0.9.5 [b86e33f2] FFTA v0.3.1 [1a297f60] FillArrays v1.16.0 ⌅ [53c48c17] FixedPointNumbers v0.8.6 [a0844989] Gamma v1.1.0 [86223c79] Graphs v1.14.0 [34004b35] HypergeometricFunctions v0.3.29 [d25df0c9] Inflate v0.1.5 [842dd82b] InlineStrings v1.4.5 [18e54dd8] IntegerMathUtils v0.1.3 [a98d9a8b] Interpolations v0.16.3 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.8.0 [5ab0869b] KernelDensity v0.6.12 [b964fa9f] LaTeXStrings v1.4.0 [2ab3a3ac] LogExpFunctions v1.0.1 [1914dd2f] MacroTools v0.5.16 [fa8bd995] MetaGraphsNext v0.8.0 [e1d29d7a] Missings v1.2.0 [46d2c3a1] MuladdMacro v0.2.6 [6fe1bfb0] OffsetArrays v1.17.0 ⌅ [bac558e1] OrderedCollections v1.8.2 [90014a1f] PDMats v0.11.40 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [08abe8d2] PrettyTables v3.4.0 [27ebfcd6] Primes v0.5.7 [43287f4e] PtrArrays v1.4.0 [1fd47b50] QuadGK v2.11.3 [c84ed2f1] Ratios v0.4.5 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [f2b01f46] Roots v3.0.2 [321657f4] ScientificTypes v3.3.0 [30f210dd] ScientificTypesBase v3.1.0 [91c51154] SentinelArrays v1.4.10 [699a6c99] SimpleTraits v0.9.6 [a2af1166] SortingAlgorithms v1.2.3 [276daf66] SpecialFunctions v2.8.0 [90137ffa] StaticArrays v1.9.18 [1e83bf80] StaticArraysCore v1.4.4 [64bff920] StatisticalTraits v3.5.0 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.12 [4c63d2b9] StatsFuns v2.2.0 [892a3eda] StringManipulation v0.4.4 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.13.0 [efce3f68] WoodburyMatrices v1.1.0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.14.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.13.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.5.5+2 [4536629a] OpenBLAS_jll v0.3.33+0 [05823500] OpenLibm_jll v0.8.7+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [8e850b90] libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ┌ Warning: `LinearInterpolation(args...; kwargs...)` is deprecated, use `linear_interpolation(args...; kwargs...)` instead. │ caller = fit_mixdist_hist(llr::Vector{Float64}, ns::Int64, ng::Int64, test::Symbol) at posteriorprobs_hist.jl:256 └ @ BioFindr ~/.julia/packages/BioFindr/ArgAu/src/posteriorprobs_hist.jl:256 pprob_col test 0: Test Failed at /home/pkgeval/.julia/packages/BioFindr/ArgAu/test/postprobs_tests.jl:28 Expression: all(pp_default .≈ BioFindr.fit_mixdist_hist(llr, ns)) Evaluated: all(Bool[0, 0, 0, 0, 0, 0, 0, 0, 0, 0 … 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]) Stacktrace: [1] top-level scope @ ~/.julia/packages/BioFindr/ArgAu/test/postprobs_tests.jl:27 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [3] macro expansion @ ~/.julia/packages/BioFindr/ArgAu/test/postprobs_tests.jl:28 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:784 [inlined] pprob_col test 2: Test Failed at /home/pkgeval/.julia/packages/BioFindr/ArgAu/test/postprobs_tests.jl:40 Expression: all(pp_default .≈ BioFindr.fit_mixdist_hist(llr1, ns, ng, :link)) Evaluated: all(Bool[0, 0, 0, 0, 0, 0, 0, 0, 0, 0 … 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]) Stacktrace: [1] top-level scope @ ~/.julia/packages/BioFindr/ArgAu/test/postprobs_tests.jl:39 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [3] macro expansion @ ~/.julia/packages/BioFindr/ArgAu/test/postprobs_tests.jl:40 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:784 [inlined] pprob_col test 2-5: Test Failed at /home/pkgeval/.julia/packages/BioFindr/ArgAu/test/postprobs_tests.jl:52 Expression: all(pp_default[:, 1] .≈ BioFindr.fit_mixdist_hist(llr2, ns, ng, :link)) Evaluated: all(Bool[0, 0, 0, 0, 0, 0, 0, 0, 0, 0 … 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]) Stacktrace: [1] top-level scope @ ~/.julia/packages/BioFindr/ArgAu/test/postprobs_tests.jl:51 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [3] macro expansion @ ~/.julia/packages/BioFindr/ArgAu/test/postprobs_tests.jl:52 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:784 [inlined] pprob_col test 2-5: Test Failed at /home/pkgeval/.julia/packages/BioFindr/ArgAu/test/postprobs_tests.jl:53 Expression: all(pp_default[:, 2] .≈ 1 .- BioFindr.fit_mixdist_hist(llr3, ns, ng, :med)) Evaluated: all(Bool[0, 0, 0, 0, 0, 0, 0, 0, 0, 0 … 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]) Stacktrace: [1] top-level scope @ ~/.julia/packages/BioFindr/ArgAu/test/postprobs_tests.jl:51 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [3] macro expansion @ ~/.julia/packages/BioFindr/ArgAu/test/postprobs_tests.jl:53 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:784 [inlined] pprob_col test 2-5: Test Failed at /home/pkgeval/.julia/packages/BioFindr/ArgAu/test/postprobs_tests.jl:54 Expression: all(pp_default[:, 3] .≈ BioFindr.fit_mixdist_hist(llr4, ns, ng, :relev)) Evaluated: all(Bool[0, 0, 0, 0, 0, 0, 0, 0, 0, 0 … 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]) Stacktrace: [1] top-level scope @ ~/.julia/packages/BioFindr/ArgAu/test/postprobs_tests.jl:51 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [3] macro expansion @ ~/.julia/packages/BioFindr/ArgAu/test/postprobs_tests.jl:54 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:784 [inlined] pprob_col test 2-5: Test Failed at /home/pkgeval/.julia/packages/BioFindr/ArgAu/test/postprobs_tests.jl:55 Expression: all(pp_default[:, 4] .≈ BioFindr.fit_mixdist_hist(llr5, ns, ng, :pleio)) Evaluated: all(Bool[0, 0, 0, 0, 0, 0, 0, 0, 0, 0 … 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]) Stacktrace: [1] top-level scope @ ~/.julia/packages/BioFindr/ArgAu/test/postprobs_tests.jl:51 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [3] macro expansion @ ~/.julia/packages/BioFindr/ArgAu/test/postprobs_tests.jl:55 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:784 [inlined] Test Summary: | Pass Fail Total Time BioFindr.jl | 231 6 237 3m34.5s Supernormalization | 6 6 12.4s Real LLRs | 22 22 22.1s LBeta | 12 12 0.4s Random LLRs | 24 24 5.9s Posterior probabilities | 74 6 80 1m21.7s pprob_col test 0 | 2 1 3 1m08.9s pprob_col test 2 | 2 1 3 0.1s pprob_col test 2-5 | 8 4 12 1.5s fit_mixdist_hist | 10 10 1.3s fit_mixdist_mom test | 35 35 0.2s fit_mixdist_KDE | 15 15 0.0s fit_kde tests | 1 1 1.2s pi0est tests | 1 1 0.0s Utils | 52 52 57.2s findr and findr_matrix | 30 30 25.5s dagfindr! | 11 11 9.3s RNG of the outermost testset: Xoshiro(0xed20b66082563222, 0x164d6f829d5ca5a0, 0x0e1c1f03ff95b056, 0xc7c9c687a06e8da7, 0xed1a0db1bb5e7441) ERROR: LoadError: Some tests did not pass: 231 passed, 6 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/BioFindr/ArgAu/test/runtests.jl:15 Testing failed after 241.93s ERROR: LoadError: Package BioFindr errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3247 [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] [7] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [8] include(mod::Module, _path::String) @ Base Base.jl:325 [9] exec_options(opts::Base.JLOptions) @ Base client.jl:355 [10] _start() @ Base client.jl:596 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 337.68s: package has test failures