Package evaluation to test MolecularGraphKernels on Julia 1.14.0-DEV.2600 (ff0e675117*) started at 2026-07-06T14:06:35.085


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv, BugReporting)...
  Activating project at `~/.julia/environments/v1.14`

Set-up completed after 17.32s


################################################################################
# Installation
#

Installing MolecularGraphKernels...
   Resolving package versions...
    Updating `~/.julia/environments/v1.14/Project.toml`
  [bf3818bd] + MolecularGraphKernels v0.11.0
    Updating `~/.julia/environments/v1.14/Manifest.toml`
⌅ [ec485272] + ArnoldiMethod v0.2.0
  [159f3aea] + Cairo v1.1.1
⌅ [3da002f7] + ColorTypes v0.11.5
⌅ [5ae59095] + Colors v0.12.11
  [861a8166] + Combinatorics v1.1.0
  [34da2185] + Compat v4.18.1
  [a81c6b42] + Compose v0.9.7
  [9a962f9c] + DataAPI v1.16.0
⌅ [864edb3b] + DataStructures v0.18.22
  [8bb1440f] + DelimitedFiles v1.9.1
  [5789e2e9] + FileIO v1.19.0
⌅ [53c48c17] + FixedPointNumbers v0.8.6
⌅ [a2cc645c] + GraphPlot v0.5.2
  [a2bd30eb] + Graphics v1.1.3
⌃ [86223c79] + Graphs v1.9.0
  [d25df0c9] + Inflate v0.1.5
  [c8e1da08] + IterTools v1.10.0
⌅ [033835bb] + JLD2 v0.4.55
  [692b3bcd] + JLLWrappers v1.8.0
⌅ [682c06a0] + JSON v0.21.4
  [fc18253b] + LazyJSON v0.2.2
  [1914dd2f] + MacroTools v0.5.16
  [442fdcdd] + Measures v0.3.3
  [6fafb56a] + Memoization v0.2.2
⌅ [626554b9] + MetaGraphs v0.7.2
  [e1d29d7a] + Missings v1.2.0
⌅ [6c89ec66] + MolecularGraph v0.13.0
  [bf3818bd] + MolecularGraphKernels v0.11.0
  [77ba4419] + NaNMath v1.1.4
  [4d1e1d77] + Nullables v1.0.0
⌅ [bac558e1] + OrderedCollections v1.8.2
  [69de0a69] + Parsers v2.8.6
  [7b2266bf] + PeriodicTable v1.2.1
  [91cefc8d] + PrecompileSignatures v3.0.3
  [aea7be01] + PrecompileTools v1.3.4
  [21216c6a] + Preferences v1.5.2
  [92933f4c] + ProgressMeter v1.11.0
⌅ [f8a19df8] + PropertyDicts v0.1.2
  [44044271] + RDKitMinimalLib v1.2.1
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [699a6c99] + SimpleTraits v0.9.6
  [90137ffa] + StaticArrays v1.9.18
  [1e83bf80] + StaticArraysCore v1.4.4
  [10745b16] + Statistics v1.11.1
  [69024149] + StringEncodings v0.3.7
  [3bb67fe8] + TranscodingStreams v0.11.3
  [1986cc42] + Unitful v1.28.0
  [cbff2730] + Unmarshal v0.4.4
  [ddb6d928] + YAML v0.4.16
  [6e34b625] + Bzip2_jll v1.0.9+0
  [83423d85] + Cairo_jll v1.18.7+0
  [2e619515] + Expat_jll v2.8.1+0
  [a3f928ae] + Fontconfig_jll v2.17.1+0
  [d7e528f0] + FreeType2_jll v2.14.3+1
  [559328eb] + FriBidi_jll v1.0.17+0
⌅ [b0724c58] + GettextRuntime_jll v0.22.4+0
  [7746bdde] + Glib_jll v2.86.3+0
  [3b182d85] + Graphite2_jll v1.3.16+0
  [2e76f6c2] + HarfBuzz_jll v100.14002.1+0
  [1d63c593] + LLVMOpenMP_jll v18.1.8+0
⌅ [e9f186c6] + Libffi_jll v3.4.7+0
  [94ce4f54] + Libiconv_jll v1.18.0+0
  [4b2f31a3] + Libmount_jll v2.42.0+0
  [38a345b3] + Libuuid_jll v2.42.0+0
⌃ [36c8627f] + Pango_jll v1.42.4+10
  [30392449] + Pixman_jll v0.46.4+0
⌅ [03d1d220] + RDKit_jll v2022.9.5+0
  [4f6342f7] + Xorg_libX11_jll v1.8.13+0
  [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0
  [a3789734] + Xorg_libXdmcp_jll v1.1.6+0
  [1082639a] + Xorg_libXext_jll v1.3.8+0
  [ea2f1a96] + Xorg_libXrender_jll v0.9.12+0
  [c7cfdc94] + Xorg_libxcb_jll v1.17.1+0
  [c5fb5394] + Xorg_xtrans_jll v1.6.0+0
⌅ [28df3c45] + boost_jll v1.76.0+1
  [f6050b86] + coordgenlibs_jll v3.0.2+0
  [172afb32] + libinchi_jll v1.6.0+0
  [b53b4c65] + libpng_jll v1.6.58+0
  [0dad84c5] + ArgTools v1.2.0
  [56f22d72] + Artifacts v1.11.0
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  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0
  [b27032c2] + LibCURL v1.0.0
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.14.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.14.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v1.13.0
  [9e88b42a] + Serialization v1.11.0
  [1a1011a3] + SharedArrays v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [f489334b] + StyledStrings v1.13.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.5.5+2
  [deac9b47] + LibCURL_jll v8.21.0+0
  [e37daf67] + LibGit2_jll v1.9.4+0
  [29816b5a] + LibSSH2_jll v1.11.101+0
  [14a3606d] + MozillaCACerts_jll v2026.5.14
  [4536629a] + OpenBLAS_jll v0.3.33+0
  [05823500] + OpenLibm_jll v0.8.7+0
  [458c3c95] + OpenSSL_jll v3.5.7+0
  [efcefdf7] + PCRE2_jll v10.47.0+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [83775a58] + Zlib_jll v1.3.2+0
  [3161d3a3] + Zstd_jll v1.5.7+1
  [8e850b90] + libblastrampoline_jll v5.15.0+0
  [8e850ede] + nghttp2_jll v1.69.0+0
  [3f19e933] + p7zip_jll v17.8.0+0
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`

Installation completed after 10.53s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...
Precompiling project...
Internal error: during type inference of
docm(LineNumberNode, Module, Any, Any)
Encountered unexpected error in runtime:
AssertionError(msg="InferenceResult without ci_as_edge")
get_local_code at ./../usr/share/julia/Compiler/src/ssair/inlining.jl:828:0 [inlined]
resolve_todo at ./../usr/share/julia/Compiler/src/ssair/inlining.jl:850:0 (pc: 200)
#analyze_method!#217 at ./../usr/share/julia/Compiler/src/ssair/inlining.jl:920:0 (pc: 146)
analyze_method! at ./../usr/share/julia/Compiler/src/ssair/inlining.jl:886:0 [inlined]
#handle_call_result!#220 at ./../usr/share/julia/Compiler/src/ssair/inlining.jl:1400:0 (pc: 84)
handle_call_result! at ./../usr/share/julia/Compiler/src/ssair/inlining.jl:1389:0 [inlined]
#handle_any_call_result!#218 at ./../usr/share/julia/Compiler/src/ssair/inlining.jl:1296:0 (pc: 56)
handle_any_call_result! at ./../usr/share/julia/Compiler/src/ssair/inlining.jl:1285:0 [inlined]
compute_inlining_cases at ./../usr/share/julia/Compiler/src/ssair/inlining.jl:1349:0 (pc: 307)
handle_call! at ./../usr/share/julia/Compiler/src/ssair/inlining.jl:1381:0 [inlined]
assemble_inline_todo! at ./../usr/share/julia/Compiler/src/ssair/inlining.jl:1628:0 (pc: 402)
ssa_inlining_pass! at ./../usr/share/julia/Compiler/src/ssair/inlining.jl:76:0 [inlined]
run_passes_ipo_safe at ./../usr/share/julia/Compiler/src/optimize.jl:1050:0 (pc: 8)
run_passes_ipo_safe at ./../usr/share/julia/Compiler/src/optimize.jl:1063:0 [inlined]
optimize at ./../usr/share/julia/Compiler/src/optimize.jl:1036:0 [inlined]
finish_nocycle at ./../usr/share/julia/Compiler/src/typeinfer.jl:272:0 (pc: 14)
jfptr_finish_nocycle_1.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4479:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4717:12
typeinf at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:5004:0 (pc: 252)
typeinf_ext at ./../usr/share/julia/Compiler/src/typeinfer.jl:1539:0 (pc: 150)
typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1762:0 [inlined]
typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1771:0 (pc: 16)
jfptr_typeinf_ext_toplevel_5.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4479:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4717:12
jl_apply at /source/src/julia.h:2430:12 [inlined]
jl_type_infer at /source/src/gf.c:475:35
jl_compile_method_very_internal at /source/src/gf.c:3970:20
_jl_invoke at /source/src/gf.c:4471:16 [inlined]
ijl_apply_generic at /source/src/gf.c:4717:12
jl_apply at /source/src/julia.h:2430:12 [inlined]
jl_f__apply_iterate at /source/src/builtins.c:934:26
@doc at ./boot.jl:848:0 (pc: 3)
_jl_invoke at /source/src/gf.c:4479:23 [inlined]
ijl_invoke at /source/src/gf.c:4486:12
jl_invoke_julia_macro at /source/src/ast.c:1064:18
jl_expand_macros at /source/src/ast.c:1126:30
jl_fl_lower at /source/src/ast.c:1204:12
fl_lower at ./flfrontend.jl:24:0 (pc: 17)
jfptr_fl_lower_1.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4479:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4717:12
jl_apply at /source/src/julia.h:2430:12 [inlined]
ijl_lower at /source/src/ast.c:1271:26
jl_eval_toplevel_stmts at /source/src/toplevel.c:594:31
jl_toplevel_eval_flex at /source/src/toplevel.c:680:27
ijl_toplevel_eval at /source/src/toplevel.c:778:12
ijl_toplevel_eval_in at /source/src/toplevel.c:823:13
eval at ./boot.jl:533:0 (pc: 1)
include_string at ./loading.jl:3132:0 (pc: 208)
_jl_invoke at /source/src/gf.c:4479:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4717:12
_include at ./loading.jl:3192:0 (pc: 122)
include at ./Base.jl:326:0 (pc: 1)
IncludeInto at ./Base.jl:327:0 (pc: 2)
jfptr_IncludeInto_1.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4479:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4717:12
jl_apply at /source/src/julia.h:2430:12 [inlined]
do_call at /source/src/interpreter.c:123:26
eval_value at /source/src/interpreter.c:259:16
eval_stmt_value at /source/src/interpreter.c:194:23 [inlined]
eval_body at /source/src/interpreter.c:760:13
jl_interpret_toplevel_thunk at /source/src/interpreter.c:950:21
top-level scope at /home/pkgeval/.julia/packages/LazyJSON/LpIGF/src/LazyJSON.jl:671:0 (pc: 2)
ijl_eval_thunk at /source/src/toplevel.c:764:18
jl_toplevel_eval_flex at /source/src/toplevel.c:708:26
jl_eval_toplevel_stmts at /source/src/toplevel.c:598:15
jl_eval_module_expr at /source/src/toplevel.c:262:5 [inlined]
jl_toplevel_eval_flex at /source/src/toplevel.c:661:27
jl_eval_toplevel_stmts at /source/src/toplevel.c:598:15
jl_toplevel_eval_flex at /source/src/toplevel.c:680:27
ijl_toplevel_eval at /source/src/toplevel.c:778:12
ijl_toplevel_eval_in at /source/src/toplevel.c:823:13
eval at ./boot.jl:533:0 (pc: 1)
include_string at ./loading.jl:3132:0 (pc: 208)
_jl_invoke at /source/src/gf.c:4479:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4717:12
_include at ./loading.jl:3192:0 (pc: 122)
include at ./Base.jl:325:0 (pc: 1)
include_package_for_output at ./loading.jl:3303:0 (pc: 848)
jfptr_include_package_for_output_1.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4479:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4717:12
jl_apply at /source/src/julia.h:2430:12 [inlined]
do_call at /source/src/interpreter.c:123:26
eval_value at /source/src/interpreter.c:259:16
eval_stmt_value at /source/src/interpreter.c:194:23 [inlined]
eval_body at /source/src/interpreter.c:760:13
jl_interpret_toplevel_thunk at /source/src/interpreter.c:950:21
top-level scope at stdin:5:0 (pc: 22)
ijl_eval_thunk at /source/src/toplevel.c:764:18
jl_toplevel_eval_flex at /source/src/toplevel.c:708:26
jl_eval_toplevel_stmts at /source/src/toplevel.c:598:15
jl_toplevel_eval_flex at /source/src/toplevel.c:680:27
ijl_toplevel_eval at /source/src/toplevel.c:778:12
ijl_toplevel_eval_in at /source/src/toplevel.c:823:13
eval at ./boot.jl:533:0 (pc: 1)
include_string at ./loading.jl:3132:0 (pc: 208)
include_string at ./loading.jl:3142:0 [inlined]
exec_options at ./client.jl:353:0 (pc: 819)
_start at ./client.jl:596:0 (pc: 295)
jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4479:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4717:12
jl_apply at /source/src/julia.h:2430:12 [inlined]
true_main at /source/src/jlapi.c:985:29
jl_repl_entrypoint at /source/src/jlapi.c:1152:15
main at /source/cli/loader_exe.c:58:15
unknown function (ip: 0x79ff88270249) at /lib/x86_64-linux-gnu/libc.so.6
__libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S

[11] signal 6 (-6): Aborted
in expression starting at /home/pkgeval/.julia/packages/LazyJSON/LpIGF/src/AbstractDict.jl:91
unknown function (ip: 0x79ff882d3ebc) at /lib/x86_64-linux-gnu/libc.so.6
gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
jl_type_infer at /source/src/gf.c:494:9
jl_compile_method_very_internal at /source/src/gf.c:3970:20
_jl_invoke at /source/src/gf.c:4471:16 [inlined]
ijl_apply_generic at /source/src/gf.c:4717:12
jl_apply at /source/src/julia.h:2430:12 [inlined]
jl_f__apply_iterate at /source/src/builtins.c:934:26
@doc at ./boot.jl:848:0 (pc: 3)
_jl_invoke at /source/src/gf.c:4479:23 [inlined]
ijl_invoke at /source/src/gf.c:4486:12
jl_invoke_julia_macro at /source/src/ast.c:1064:18
jl_expand_macros at /source/src/ast.c:1126:30
jl_fl_lower at /source/src/ast.c:1204:12
fl_lower at ./flfrontend.jl:24:0 (pc: 17)
jfptr_fl_lower_1.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4479:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4717:12
jl_apply at /source/src/julia.h:2430:12 [inlined]
ijl_lower at /source/src/ast.c:1271:26
jl_eval_toplevel_stmts at /source/src/toplevel.c:594:31
jl_toplevel_eval_flex at /source/src/toplevel.c:680:27
ijl_toplevel_eval at /source/src/toplevel.c:778:12
ijl_toplevel_eval_in at /source/src/toplevel.c:823:13
eval at ./boot.jl:533:0 (pc: 1)
include_string at ./loading.jl:3132:0 (pc: 208)
_jl_invoke at /source/src/gf.c:4479:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4717:12
_include at ./loading.jl:3192:0 (pc: 122)
include at ./Base.jl:326:0 (pc: 1)
IncludeInto at ./Base.jl:327:0 (pc: 2)
jfptr_IncludeInto_1.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4479:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4717:12
jl_apply at /source/src/julia.h:2430:12 [inlined]
do_call at /source/src/interpreter.c:123:26
eval_value at /source/src/interpreter.c:259:16
eval_stmt_value at /source/src/interpreter.c:194:23 [inlined]
eval_body at /source/src/interpreter.c:760:13
jl_interpret_toplevel_thunk at /source/src/interpreter.c:950:21
ijl_eval_thunk at /source/src/toplevel.c:764:18
jl_toplevel_eval_flex at /source/src/toplevel.c:708:26
jl_eval_toplevel_stmts at /source/src/toplevel.c:598:15
jl_eval_module_expr at /source/src/toplevel.c:262:5 [inlined]
jl_toplevel_eval_flex at /source/src/toplevel.c:661:27
jl_eval_toplevel_stmts at /source/src/toplevel.c:598:15
jl_toplevel_eval_flex at /source/src/toplevel.c:680:27
ijl_toplevel_eval at /source/src/toplevel.c:778:12
ijl_toplevel_eval_in at /source/src/toplevel.c:823:13
eval at ./boot.jl:533:0 (pc: 1)
include_string at ./loading.jl:3132:0 (pc: 208)
_jl_invoke at /source/src/gf.c:4479:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4717:12
_include at ./loading.jl:3192:0 (pc: 122)
include at ./Base.jl:325:0 (pc: 1)
include_package_for_output at ./loading.jl:3303:0 (pc: 848)
jfptr_include_package_for_output_1.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4479:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4717:12
jl_apply at /source/src/julia.h:2430:12 [inlined]
do_call at /source/src/interpreter.c:123:26
eval_value at /source/src/interpreter.c:259:16
eval_stmt_value at /source/src/interpreter.c:194:23 [inlined]
eval_body at /source/src/interpreter.c:760:13
jl_interpret_toplevel_thunk at /source/src/interpreter.c:950:21
ijl_eval_thunk at /source/src/toplevel.c:764:18
jl_toplevel_eval_flex at /source/src/toplevel.c:708:26
jl_eval_toplevel_stmts at /source/src/toplevel.c:598:15
jl_toplevel_eval_flex at /source/src/toplevel.c:680:27
ijl_toplevel_eval at /source/src/toplevel.c:778:12
ijl_toplevel_eval_in at /source/src/toplevel.c:823:13
eval at ./boot.jl:533:0 (pc: 1)
include_string at ./loading.jl:3132:0 (pc: 208)
include_string at ./loading.jl:3142:0 [inlined]
exec_options at ./client.jl:353:0 (pc: 819)
_start at ./client.jl:596:0 (pc: 295)
jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4479:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4717:12
jl_apply at /source/src/julia.h:2430:12 [inlined]
true_main at /source/src/jlapi.c:985:29
jl_repl_entrypoint at /source/src/jlapi.c:1152:15
main at /source/cli/loader_exe.c:58:15
unknown function (ip: 0x79ff88270249) at /lib/x86_64-linux-gnu/libc.so.6
__libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S
Allocations: 1282803 (Pool: 1282769; Big: 34); GC: 2
              ✗ LazyJSON

Precompilation completed after 35.81s


################################################################################
# Testing
#

     Testing MolecularGraphKernels
      Status `/tmp/jl_zNkvkE/Project.toml`
  [4c88cf16] Aqua v0.8.16
⌅ [5ae59095] Colors v0.12.11
  [861a8166] Combinatorics v1.1.0
⌃ [a2441757] Coverage v1.7.0
  [e30172f5] Documenter v1.17.0
⌃ [86223c79] Graphs v1.9.0
  [b5f81e59] IOCapture v1.0.0
⌅ [626554b9] MetaGraphs v0.7.2
⌅ [6c89ec66] MolecularGraph v0.13.0
  [bf3818bd] MolecularGraphKernels v0.11.0
  [44044271] RDKitMinimalLib v1.2.1
  [b77e0a4c] InteractiveUtils v1.11.0
  [37e2e46d] LinearAlgebra v1.14.0
  [2f01184e] SparseArrays v1.13.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_zNkvkE/Manifest.toml`
  [a4c015fc] ANSIColoredPrinters v0.0.1
  [1520ce14] AbstractTrees v0.4.5
  [4c88cf16] Aqua v0.8.16
  [c7e460c6] ArgParse v1.2.0
⌅ [ec485272] ArnoldiMethod v0.2.0
  [d1d4a3ce] BitFlags v0.1.10
  [159f3aea] Cairo v1.1.1
  [944b1d66] CodecZlib v0.7.8
⌅ [3da002f7] ColorTypes v0.11.5
⌅ [5ae59095] Colors v0.12.11
  [861a8166] Combinatorics v1.1.0
  [34da2185] Compat v4.18.1
  [a81c6b42] Compose v0.9.7
  [f0e56b4a] ConcurrentUtilities v2.5.1
⌃ [a2441757] Coverage v1.7.0
  [c36e975a] CoverageTools v1.4.1
  [9a962f9c] DataAPI v1.16.0
⌅ [864edb3b] DataStructures v0.18.22
  [8bb1440f] DelimitedFiles v1.9.1
  [ffbed154] DocStringExtensions v0.9.5
  [e30172f5] Documenter v1.17.0
  [460bff9d] ExceptionUnwrapping v0.1.11
  [5789e2e9] FileIO v1.19.0
⌅ [53c48c17] FixedPointNumbers v0.8.6
  [d7ba0133] Git v1.5.0
⌅ [a2cc645c] GraphPlot v0.5.2
  [a2bd30eb] Graphics v1.1.3
⌃ [86223c79] Graphs v1.9.0
⌅ [cd3eb016] HTTP v1.11.0
  [b5f81e59] IOCapture v1.0.0
  [d25df0c9] Inflate v0.1.5
  [c8e1da08] IterTools v1.10.0
⌅ [033835bb] JLD2 v0.4.55
  [692b3bcd] JLLWrappers v1.8.0
⌅ [682c06a0] JSON v0.21.4
  [70703baa] JuliaSyntax v1.0.2
  [0e77f7df] LazilyInitializedFields v1.3.0
  [fc18253b] LazyJSON v0.2.2
  [e6f89c97] LoggingExtras v1.2.0
  [1914dd2f] MacroTools v0.5.16
  [d0879d2d] MarkdownAST v0.1.3
  [739be429] MbedTLS v1.1.10
  [442fdcdd] Measures v0.3.3
  [6fafb56a] Memoization v0.2.2
⌅ [626554b9] MetaGraphs v0.7.2
  [e1d29d7a] Missings v1.2.0
⌅ [6c89ec66] MolecularGraph v0.13.0
  [bf3818bd] MolecularGraphKernels v0.11.0
  [77ba4419] NaNMath v1.1.4
  [4d1e1d77] Nullables v1.0.0
  [4d8831e6] OpenSSL v1.6.1
⌅ [bac558e1] OrderedCollections v1.8.2
  [69de0a69] Parsers v2.8.6
  [7b2266bf] PeriodicTable v1.2.1
  [91cefc8d] PrecompileSignatures v3.0.3
  [aea7be01] PrecompileTools v1.3.4
  [21216c6a] Preferences v1.5.2
  [92933f4c] ProgressMeter v1.11.0
⌅ [f8a19df8] PropertyDicts v0.1.2
  [44044271] RDKitMinimalLib v1.2.1
  [189a3867] Reexport v1.2.2
  [2792f1a3] RegistryInstances v0.1.0
  [ae029012] Requires v1.3.1
  [6c6a2e73] Scratch v1.3.0
  [777ac1f9] SimpleBufferStream v1.2.0
  [699a6c99] SimpleTraits v0.9.6
  [90137ffa] StaticArrays v1.9.18
  [1e83bf80] StaticArraysCore v1.4.4
  [10745b16] Statistics v1.11.1
  [69024149] StringEncodings v0.3.7
  [b718987f] TextWrap v1.0.2
  [3bb67fe8] TranscodingStreams v0.11.3
  [5c2747f8] URIs v1.6.1
  [1986cc42] Unitful v1.28.0
  [cbff2730] Unmarshal v0.4.4
  [ddb6d928] YAML v0.4.16
  [6e34b625] Bzip2_jll v1.0.9+0
  [83423d85] Cairo_jll v1.18.7+0
  [2e619515] Expat_jll v2.8.1+0
  [a3f928ae] Fontconfig_jll v2.17.1+0
  [d7e528f0] FreeType2_jll v2.14.3+1
  [559328eb] FriBidi_jll v1.0.17+0
⌅ [b0724c58] GettextRuntime_jll v0.22.4+0
  [020c3dae] Git_LFS_jll v3.7.1+0
  [f8c6e375] Git_jll v2.54.0+0
  [7746bdde] Glib_jll v2.86.3+0
  [3b182d85] Graphite2_jll v1.3.16+0
  [2e76f6c2] HarfBuzz_jll v100.14002.1+0
  [1d63c593] LLVMOpenMP_jll v18.1.8+0
⌅ [e9f186c6] Libffi_jll v3.4.7+0
  [94ce4f54] Libiconv_jll v1.18.0+0
  [4b2f31a3] Libmount_jll v2.42.0+0
  [38a345b3] Libuuid_jll v2.42.0+0
  [c8ffd9c3] MbedTLS_jll v2.28.1010+0
  [9bd350c2] OpenSSH_jll v10.3.1+0
⌃ [36c8627f] Pango_jll v1.42.4+10
  [30392449] Pixman_jll v0.46.4+0
⌅ [03d1d220] RDKit_jll v2022.9.5+0
  [4f6342f7] Xorg_libX11_jll v1.8.13+0
  [0c0b7dd1] Xorg_libXau_jll v1.0.13+0
  [a3789734] Xorg_libXdmcp_jll v1.1.6+0
  [1082639a] Xorg_libXext_jll v1.3.8+0
  [ea2f1a96] Xorg_libXrender_jll v0.9.12+0
  [c7cfdc94] Xorg_libxcb_jll v1.17.1+0
  [c5fb5394] Xorg_xtrans_jll v1.6.0+0
⌅ [28df3c45] boost_jll v1.76.0+1
  [f6050b86] coordgenlibs_jll v3.0.2+0
  [172afb32] libinchi_jll v1.6.0+0
  [b53b4c65] libpng_jll v1.6.58+0
  [0dad84c5] ArgTools v1.2.0
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [f43a241f] Downloads v1.7.0
  [7b1f6079] FileWatching v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0
  [b27032c2] LibCURL v1.0.0
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.14.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [44cfe95a] Pkg v1.14.0
  [de0858da] Printf v1.11.0
  [3fa0cd96] REPL v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v1.13.0
  [9e88b42a] Serialization v1.11.0
  [1a1011a3] SharedArrays v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [f489334b] StyledStrings v1.13.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.5.5+2
  [deac9b47] LibCURL_jll v8.21.0+0
  [e37daf67] LibGit2_jll v1.9.4+0
  [29816b5a] LibSSH2_jll v1.11.101+0
  [14a3606d] MozillaCACerts_jll v2026.5.14
  [4536629a] OpenBLAS_jll v0.3.33+0
  [05823500] OpenLibm_jll v0.8.7+0
  [458c3c95] OpenSSL_jll v3.5.7+0
  [efcefdf7] PCRE2_jll v10.47.0+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [83775a58] Zlib_jll v1.3.2+0
  [3161d3a3] Zstd_jll v1.5.7+1
  [8e850b90] libblastrampoline_jll v5.15.0+0
  [8e850ede] nghttp2_jll v1.69.0+0
  [3f19e933] p7zip_jll v17.8.0+0
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading.
     Testing Running tests...
  Activating project at `~/.julia/environments/pkgeval`
  Activating project at `/tmp/jl_zNkvkE`
Switching execution to under rr
[FATAL src/Task.cc:3848:spawn() errno: EPERM] PTRACE_SEIZE failed for tid 32; child probably died before reaching SIGSTOP
Child's message: 
=== Start rr backtrace:
/home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr[0x556001]
/home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr[0x695feb]
/home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr(_ZN2rr4Task5spawnERNS_7SessionERNS_8ScopedFdEPS3_S5_PiRKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKSt6vectorISC_SaISC_EESJ_i+0xbf0)[0x64f170]
/home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr(_ZN2rr13RecordSessionC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKSt6vectorIS6_SaIS6_EESD_RKNS_20DisableCPUIDFeaturesENS0_16SyscallBufferingEiNS_7BindCPUES8_PKNS_9TraceUuidEbbbb+0x317)[0x58b4b7]
/home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr(_ZN2rr13RecordSession6createERKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS7_EESB_RKNS_20DisableCPUIDFeaturesENS0_16SyscallBufferingEhNS_7BindCPUERKS7_PKNS_9TraceUuidEbbbbbb+0xc1e)[0x58c98e]
/home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr(_ZN2rr13RecordCommand3runERSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS7_EE+0x66f)[0x57eb7f]
/home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr(main+0x181)[0x4d5e61]
/lib/x86_64-linux-gnu/libc.so.6(+0x2724a)[0x7a2b7eb1f24a]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85)[0x7a2b7eb1f305]
/home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr[0x4d8955]
=== End rr backtrace

Testing failed after 26.43s

ERROR: LoadError: Package MolecularGraphKernels errored during testing (received signal: 6)
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3247
  [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587
  [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172
  [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160
  [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined]
  [7] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:221
  [8] include(mod::Module, _path::String)
    @ Base Base.jl:325
  [9] exec_options(opts::Base.JLOptions)
    @ Base client.jl:355
 [10] _start()
    @ Base client.jl:596
in expression starting at /PkgEval.jl/scripts/evaluate.jl:214

PkgEval crashed after 123.91s: an internal error was encountered


################################################################################
# Bug reporting
#

Finalizing trace...

BugReporting completed after 28.98s
Uploaded rr trace to https://s3.amazonaws.com/julialang-reports/nanosoldier/pkgeval/rr/MolecularGraphKernels-1783332550.tar.zst