Package evaluation to test AtomsSystems on Julia 1.14.0-DEV.2600 (ff0e675117*) started at 2026-07-06T05:59:15.764 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 15.44s ################################################################################ # Installation # Installing AtomsSystems... Resolving package versions... Installed Compat ─────────── v4.18.1 Installed Requires ───────── v1.3.1 Installed Reexport ───────── v1.2.2 Installed AtomsSystems ───── v0.1.2 Installed Preferences ────── v1.5.2 Installed Rotations ──────── v1.7.1 Installed Quaternions ────── v0.7.7 Installed PrecompileTools ── v1.3.4 Installed AtomsBase ──────── v0.5.3 Installed ArgCheck ───────── v2.5.0 Installed StaticArraysCore ─ v1.4.4 Installed RealDot ────────── v0.1.0 Installed PeriodicTable ──── v1.2.1 Installed UnitfulAtomic ──── v1.0.0 Installed StaticArrays ───── v1.9.18 Installed Unitful ────────── v1.28.0 Updating `~/.julia/environments/v1.14/Project.toml` [bd665c09] + AtomsSystems v0.1.2 Updating `~/.julia/environments/v1.14/Manifest.toml` [dce04be8] + ArgCheck v2.5.0 [a963bdd2] + AtomsBase v0.5.3 [bd665c09] + AtomsSystems v0.1.2 [34da2185] + Compat v4.18.1 [7b2266bf] + PeriodicTable v1.2.1 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [94ee1d12] + Quaternions v0.7.7 [c1ae055f] + RealDot v0.1.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [6038ab10] + Rotations v1.7.1 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 [1986cc42] + Unitful v1.28.0 [a7773ee8] + UnitfulAtomic v1.0.0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.5+2 [4536629a] + OpenBLAS_jll v0.3.33+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Installation completed after 5.04s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling project... 4.3 s ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. Precompiling package dependencies... Precompiling project... 0.6 s ✓ Reexport 0.5 s ✓ RealDot 0.7 s ✓ StaticArraysCore 0.8 s ✓ DocStringExtensions 0.6 s ✓ ArgCheck 0.9 s ✓ Requires 36.9 s ✓ Unitful 1.0 s ✓ Compat 1.3 s ✓ Preferences 0.8 s ✓ Quaternions 2.0 s ✓ Unitful → PrintfExt 0.6 s ✓ Compat → CompatLinearAlgebraExt 2.0 s ✓ JLLWrappers 1.7 s ✓ PrecompileTools 8.8 s ✓ UnitfulAtomic 5.7 s ✓ PeriodicTable 6.2 s ✓ Aqua 2.1 s ✓ Chemfiles_jll 13.6 s ✓ StaticArrays 5.1 s ✓ Rotations 5.6 s ✓ AtomsBase 6.1 s ✓ Chemfiles 4.8 s ✓ AtomsBaseTesting 5.6 s ✓ AtomsSystems 4.4 s ✓ AtomsSystems → ChemfilesAtomsSystemsExt 25 dependencies successfully precompiled in 118 seconds. 30 already precompiled. Precompilation completed after 157.32s ################################################################################ # Testing # Testing AtomsSystems Status `/tmp/jl_F9ajUE/Project.toml` [4c88cf16] Aqua v0.8.16 [a963bdd2] AtomsBase v0.5.3 [ed7c10db] AtomsBaseTesting v0.4.0 [bd665c09] AtomsSystems v0.1.2 [46823bd8] Chemfiles v0.10.43 [6038ab10] Rotations v1.7.1 [1986cc42] Unitful v1.28.0 [37e2e46d] LinearAlgebra v1.14.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_F9ajUE/Manifest.toml` [4c88cf16] Aqua v0.8.16 [dce04be8] ArgCheck v2.5.0 [a963bdd2] AtomsBase v0.5.3 [ed7c10db] AtomsBaseTesting v0.4.0 [bd665c09] AtomsSystems v0.1.2 [46823bd8] Chemfiles v0.10.43 [34da2185] Compat v4.18.1 [ffbed154] DocStringExtensions v0.9.5 [692b3bcd] JLLWrappers v1.8.0 [7b2266bf] PeriodicTable v1.2.1 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [94ee1d12] Quaternions v0.7.7 [c1ae055f] RealDot v0.1.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [6038ab10] Rotations v1.7.1 [90137ffa] StaticArrays v1.9.18 [1e83bf80] StaticArraysCore v1.4.4 [1986cc42] Unitful v1.28.0 [a7773ee8] UnitfulAtomic v1.0.0 [78a364fa] Chemfiles_jll v0.10.4+0 [0dad84c5] ArgTools v1.2.0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.14.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.13.0 [9e88b42a] Serialization v1.11.0 [f489334b] StyledStrings v1.13.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.5.5+2 [deac9b47] LibCURL_jll v8.21.0+0 [e37daf67] LibGit2_jll v1.9.4+0 [29816b5a] LibSSH2_jll v1.11.101+0 [14a3606d] MozillaCACerts_jll v2026.5.14 [4536629a] OpenBLAS_jll v0.3.33+0 [458c3c95] OpenSSL_jll v3.5.7+0 [efcefdf7] PCRE2_jll v10.47.0+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.69.0+0 [3f19e933] p7zip_jll v17.8.0+0 Testing Running tests... 1 ambiguities found. To get a list, set `broken = false`. Ambiguity #1 kwcall(::NamedTuple, ::Type{AtomsSystems.SimpleAtom}, spc::AtomsBase.ChemicalSpecies, r::StaticArraysCore.SVector{D, TP}, v::StaticArraysCore.SVector{D, <:Union{Unitful.Quantity{T, Unitful.Dimensions{(Unitful.Dimension{:Length}(1//1), Unitful.Dimension{:Time}(-1//1))}(), U}, Unitful.Level{L, S, Unitful.Quantity{T, Unitful.Dimensions{(Unitful.Dimension{:Length}(1//1), Unitful.Dimension{:Time}(-1//1))}(), U}} where {L, S}} where {T, U}}) where {D, TP<:(Union{Quantity{T, Dimensions{(Dimension{:Length}(1//1),)}(), U}, Level{L, S, Quantity{T, Dimensions{(Dimension{:Length}(1//1),)}(), U}} where {L, S}} where {T, U})} @ AtomsSystems ~/.julia/packages/AtomsSystems/9YyAz/src/simple_atom.jl:35 kwcall(::NamedTuple, ::Core.TypeEgal{AtomsSystems.SimpleAtom}, id::Union{AtomsBase.ChemicalSpecies, AbstractString, Integer, Symbol}, r::AbstractVector{<:Union{Unitful.Quantity{T, Unitful.Dimensions{(Unitful.Dimension{:Length}(1//1),)}(), U}, Unitful.Level{L, S, Unitful.Quantity{T, Unitful.Dimensions{(Unitful.Dimension{:Length}(1//1),)}(), U}} where {L, S}} where {T, U}}, v::AbstractVector{<:Union{Unitful.Quantity{T, Unitful.Dimensions{(Unitful.Dimension{:Length}(1//1), Unitful.Dimension{:Time}(-1//1))}(), U}, Unitful.Level{L, S, Unitful.Quantity{T, Unitful.Dimensions{(Unitful.Dimension{:Length}(1//1), Unitful.Dimension{:Time}(-1//1))}(), U}} where {L, S}} where {T, U}}) @ AtomsSystems ~/.julia/packages/AtomsSystems/9YyAz/src/simple_atom.jl:105 Possible fix, define kwcall(::NamedTuple, ::Core.TypeEgal{AtomsSystems.SimpleAtom}, ::AtomsBase.ChemicalSpecies, ::StaticArraysCore.SVector{D, TP}, ::StaticArraysCore.SVector{D, <:Union{Unitful.Quantity{T, 𝐋 𝐓^-1, U}, Unitful.Level{L, S, Unitful.Quantity{T, 𝐋 𝐓^-1, U}} where {L, S}} where {T, U}}) where {D, TP<:(Union{Unitful.Quantity{T, 𝐋, U}, Unitful.Level{L, S, Unitful.Quantity{T, 𝐋, U}} where {L, S}} where {T, U})} Method ambiguity: Test Failed at /home/pkgeval/.julia/packages/Aqua/h1qD0/src/ambiguities.jl:80 Expression: iszero(num_ambiguities) Evaluated: iszero(1) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:784 [inlined] [2] _test_ambiguities(packages::Vector{Base.PkgId}; broken::Bool, kwargs::@Kwargs{}) @ Aqua ~/.julia/packages/Aqua/h1qD0/src/ambiguities.jl:80 [3] _test_ambiguities(packages::Vector{Base.PkgId}) @ Aqua ~/.julia/packages/Aqua/h1qD0/src/ambiguities.jl:70 [inlined] [4] test_ambiguities(packages::Vector{Module}; kwargs::@Kwargs{}) @ Aqua ~/.julia/packages/Aqua/h1qD0/src/ambiguities.jl:29 [inlined] [5] macro expansion @ ~/.julia/packages/Aqua/h1qD0/src/Aqua.jl:73 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [7] test_all(testtarget::Module; ambiguities::Bool, unbound_args::Bool, undefined_exports::Bool, project_extras::Bool, stale_deps::Bool, deps_compat::Bool, piracies::Bool, persistent_tasks::Bool, undocumented_names::Bool) @ Aqua ~/.julia/packages/Aqua/h1qD0/src/Aqua.jl:73 Test Summary: | Pass Fail Total Time Aqua.jl checks | 10 1 11 2m07.8s Method ambiguity | 1 1 34.2s Unbound type parameters | 1 1 0.1s Undefined exports | 1 1 0.0s Compare Project.toml and test/Project.toml | 1 1 0.4s Stale dependencies | 1 1 6.6s Compat bounds | 4 4 0.8s Piracy | 1 1 0.3s Persistent tasks | 1 1 1m05.2s RNG of the outermost testset: Random.Xoshiro(0x7d28921d6ba182f1, 0xdacd09c615b80640, 0x9c1f0960faba243a, 0x0c7cce245a981ce9, 0x719481530c951532) ERROR: LoadError: Some tests did not pass: 10 passed, 1 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/AtomsSystems/9YyAz/test/Aqua.jl:4 in expression starting at /home/pkgeval/.julia/packages/AtomsSystems/9YyAz/test/runtests.jl:10 Testing failed after 155.52s ERROR: LoadError: Package AtomsSystems errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3247 [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] [7] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [8] include(mod::Module, _path::String) @ Base Base.jl:325 [9] exec_options(opts::Base.JLOptions) @ Base client.jl:355 [10] _start() @ Base client.jl:596 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 360.14s: package has test failures