Package evaluation to test RCall on Julia 1.14.0-DEV.2435 (e1b2c72e96*) started at 2026-06-25T20:58:03.943


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...
  Activating project at `~/.julia/environments/v1.14`

Set-up completed after 14.06s


################################################################################
# Installation
#

Installing RCall...
   Resolving package versions...
   Installed Conda ─ v1.10.3
   Installed RCall ─ v0.14.13
    Updating `~/.julia/environments/v1.14/Project.toml`
  [6f49c342] + RCall v0.14.13
    Updating `~/.julia/environments/v1.14/Manifest.toml`
  [66dad0bd] + AliasTables v1.1.3
  [324d7699] + CategoricalArrays v1.1.1
  [34da2185] + Compat v4.18.1
  [8f4d0f93] + Conda v1.10.3
  [a8cc5b0e] + Crayons v4.1.1
  [9a962f9c] + DataAPI v1.16.0
  [a93c6f00] + DataFrames v1.8.2
  [864edb3b] + DataStructures v0.19.5
  [e2d170a0] + DataValueInterfaces v1.0.0
  [ffbed154] + DocStringExtensions v0.9.5
  [34004b35] + HypergeometricFunctions v0.3.28
  [842dd82b] + InlineStrings v1.4.5
  [41ab1584] + InvertedIndices v1.3.1
  [92d709cd] + IrrationalConstants v0.2.6
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.8.0
  [682c06a0] + JSON v1.6.1
  [b964fa9f] + LaTeXStrings v1.4.0
  [2ab3a3ac] + LogExpFunctions v1.0.1
  [e1d29d7a] + Missings v1.2.0
⌅ [bac558e1] + OrderedCollections v1.8.2
  [69de0a69] + Parsers v2.8.6
  [2dfb63ee] + PooledArrays v1.4.3
  [aea7be01] + PrecompileTools v1.3.4
  [21216c6a] + Preferences v1.5.2
  [08abe8d2] + PrettyTables v3.3.2
  [43287f4e] + PtrArrays v1.4.0
  [6f49c342] + RCall v0.14.13
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [79098fc4] + Rmath v0.9.0
  [91c51154] + SentinelArrays v1.4.10
  [1277b4bf] + ShiftedArrays v2.0.0
  [a2af1166] + SortingAlgorithms v1.2.3
  [276daf66] + SpecialFunctions v2.8.0
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.8.0
  [2913bbd2] + StatsBase v0.34.12
  [4c63d2b9] + StatsFuns v2.2.0
  [3eaba693] + StatsModels v0.7.10
  [892a3eda] + StringManipulation v0.4.4
  [ec057cc2] + StructUtils v2.8.2
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.1
  [81def892] + VersionParsing v1.3.0
  [1b915085] + WinReg v1.0.0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [f50d1b31] + Rmath_jll v0.5.1+0
  [0dad84c5] + ArgTools v1.2.0
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [9fa8497b] + Future v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0
  [b27032c2] + LibCURL v1.0.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.14.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [de0858da] + Printf v1.11.0
  [3fa0cd96] + REPL v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v1.13.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [f489334b] + StyledStrings v1.13.0
  [fa267f1f] + TOML v1.0.3
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.5.5+0
  [deac9b47] + LibCURL_jll v8.20.0+1
  [29816b5a] + LibSSH2_jll v1.11.101+0
  [14a3606d] + MozillaCACerts_jll v2026.5.14
  [4536629a] + OpenBLAS_jll v0.3.33+0
  [05823500] + OpenLibm_jll v0.8.7+0
  [458c3c95] + OpenSSL_jll v3.5.7+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [83775a58] + Zlib_jll v1.3.2+0
  [3161d3a3] + Zstd_jll v1.5.7+1
  [8e850b90] + libblastrampoline_jll v5.15.0+0
  [8e850ede] + nghttp2_jll v1.69.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`
    Building Conda → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/8f06b0cfa4c514c7b9546756dbae91fcfbc92dc9/build.log`
    Building RCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/a2be505c76807bf9ce4220cde4e1b464c726eb2f/build.log`

Installation completed after 60.54s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

┌ Warning: Could not use exact versions of packages in manifest, re-resolving
└ @ TestEnv ~/.julia/packages/TestEnv/RUPmD/src/julia-1.13/activate_set.jl:78
Precompiling package dependencies...
Precompiling project...
  12.8 s  ✓ RCall → RCallAxisArraysExt
  1 dependency successfully precompiled in 14 seconds. 120 already precompiled.

Precompilation completed after 52.11s


################################################################################
# Testing
#

     Testing RCall
        Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function.
    Updating `/tmp/jl_KYHQpb/Project.toml`
  [39de3d68] + AxisArrays v0.4.8
⌃ [992eb4ea] + CondaPkg v0.2.33
  [7073ff75] + IJulia v1.34.4
  [6f49c342] + RCall v0.14.13
  [98d24dd4] + TestSetExtensions v4.0.3
  [44d3d7a6] + Weave v0.10.12
  [44cfe95a] ~ Pkg ⇒ v1.14.0
  [8dfed614] ~ Test ⇒ v1.11.0
    Updating `/tmp/jl_KYHQpb/Manifest.toml`
  [39de3d68] + AxisArrays v0.4.8
⌃ [992eb4ea] + CondaPkg v0.2.33
  [ab62b9b5] + DeepDiffs v1.2.0
⌅ [eafb193a] + Highlights v0.5.3
  [7073ff75] + IJulia v1.34.4
  [8197267c] + IntervalSets v0.7.14
  [c8e1da08] + IterTools v1.10.0
⌅ [682c06a0] ↓ JSON v1.6.1 ⇒ v0.21.4
  [0f8b85d8] + JSON3 v1.14.3
  [0b3b1443] + MicroMamba v0.1.15
  [ffc61752] + Mustache v1.0.21
  [fa939f87] + Pidfile v1.3.0
  [6f49c342] + RCall v0.14.13
  [b3c3ace0] + RangeArrays v0.3.2
  [05181044] + RelocatableFolders v1.0.1
  [6c6a2e73] + Scratch v1.3.0
  [69024149] + StringEncodings v0.3.7
  [856f2bd8] + StructTypes v1.11.0
  [ec057cc2] - StructUtils v2.8.2
  [98d24dd4] + TestSetExtensions v4.0.3
  [44d3d7a6] + Weave v0.10.12
  [ddb6d928] + YAML v0.4.16
  [c2297ded] + ZMQ v1.5.1
  [94ce4f54] + Libiconv_jll v1.18.0+0
  [8f1865be] + ZeroMQ_jll v4.3.6+0
  [a9144af2] + libsodium_jll v1.0.21+0
  [f8abcde7] + micromamba_jll v2.3.1+0
  [4d7b5844] + pixi_jll v0.63.2+0
  [8ba89e20] + Distributed v1.11.0
  [4af54fe1] + LazyArtifacts v1.11.0
  [76f85450] + LibGit2 v1.11.0
  [a63ad114] + Mmap v1.11.0
  [44cfe95a] ~ Pkg ⇒ v1.14.0
  [a4e569a6] + Tar v1.10.0
  [8dfed614] ~ Test ⇒ v1.11.0
  [e37daf67] + LibGit2_jll v1.9.4+0
  [efcefdf7] + PCRE2_jll v10.47.0+0
  [3f19e933] + p7zip_jll v17.8.0+0
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`
        Test Successfully re-resolved
      Status `/tmp/jl_KYHQpb/Project.toml`
  [39de3d68] AxisArrays v0.4.8
  [324d7699] CategoricalArrays v1.1.1
  [8f4d0f93] Conda v1.10.3
⌃ [992eb4ea] CondaPkg v0.2.33
  [a93c6f00] DataFrames v1.8.2
  [864edb3b] DataStructures v0.19.5
  [7073ff75] IJulia v1.34.4
  [21216c6a] Preferences v1.5.2
  [6f49c342] RCall v0.14.13
  [3eaba693] StatsModels v0.7.10
  [98d24dd4] TestSetExtensions v4.0.3
  [44d3d7a6] Weave v0.10.12
  [1b915085] WinReg v1.0.0
  [ade2ca70] Dates v1.11.0
  [8f399da3] Libdl v1.11.0
  [56ddb016] Logging v1.11.0
  [44cfe95a] Pkg v1.14.0
  [3fa0cd96] REPL v1.11.0
  [9a3f8284] Random v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_KYHQpb/Manifest.toml`
  [66dad0bd] AliasTables v1.1.3
  [39de3d68] AxisArrays v0.4.8
  [324d7699] CategoricalArrays v1.1.1
  [34da2185] Compat v4.18.1
  [8f4d0f93] Conda v1.10.3
⌃ [992eb4ea] CondaPkg v0.2.33
  [a8cc5b0e] Crayons v4.1.1
  [9a962f9c] DataAPI v1.16.0
  [a93c6f00] DataFrames v1.8.2
  [864edb3b] DataStructures v0.19.5
  [e2d170a0] DataValueInterfaces v1.0.0
  [ab62b9b5] DeepDiffs v1.2.0
  [ffbed154] DocStringExtensions v0.9.5
⌅ [eafb193a] Highlights v0.5.3
  [34004b35] HypergeometricFunctions v0.3.28
  [7073ff75] IJulia v1.34.4
  [842dd82b] InlineStrings v1.4.5
  [8197267c] IntervalSets v0.7.14
  [41ab1584] InvertedIndices v1.3.1
  [92d709cd] IrrationalConstants v0.2.6
  [c8e1da08] IterTools v1.10.0
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.8.0
⌅ [682c06a0] JSON v0.21.4
  [0f8b85d8] JSON3 v1.14.3
  [b964fa9f] LaTeXStrings v1.4.0
  [2ab3a3ac] LogExpFunctions v1.0.1
  [0b3b1443] MicroMamba v0.1.15
  [e1d29d7a] Missings v1.2.0
  [ffc61752] Mustache v1.0.21
⌅ [bac558e1] OrderedCollections v1.8.2
  [69de0a69] Parsers v2.8.6
  [fa939f87] Pidfile v1.3.0
  [2dfb63ee] PooledArrays v1.4.3
  [aea7be01] PrecompileTools v1.3.4
  [21216c6a] Preferences v1.5.2
  [08abe8d2] PrettyTables v3.3.2
  [43287f4e] PtrArrays v1.4.0
  [6f49c342] RCall v0.14.13
  [b3c3ace0] RangeArrays v0.3.2
  [189a3867] Reexport v1.2.2
  [05181044] RelocatableFolders v1.0.1
  [ae029012] Requires v1.3.1
  [79098fc4] Rmath v0.9.0
  [6c6a2e73] Scratch v1.3.0
  [91c51154] SentinelArrays v1.4.10
  [1277b4bf] ShiftedArrays v2.0.0
  [a2af1166] SortingAlgorithms v1.2.3
  [276daf66] SpecialFunctions v2.8.0
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.8.0
  [2913bbd2] StatsBase v0.34.12
  [4c63d2b9] StatsFuns v2.2.0
  [3eaba693] StatsModels v0.7.10
  [69024149] StringEncodings v0.3.7
  [892a3eda] StringManipulation v0.4.4
  [856f2bd8] StructTypes v1.11.0
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.1
  [98d24dd4] TestSetExtensions v4.0.3
  [81def892] VersionParsing v1.3.0
  [44d3d7a6] Weave v0.10.12
  [1b915085] WinReg v1.0.0
  [ddb6d928] YAML v0.4.16
  [c2297ded] ZMQ v1.5.1
  [94ce4f54] Libiconv_jll v1.18.0+0
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [f50d1b31] Rmath_jll v0.5.1+0
  [8f1865be] ZeroMQ_jll v4.3.6+0
  [a9144af2] libsodium_jll v1.0.21+0
  [f8abcde7] micromamba_jll v2.3.1+0
  [4d7b5844] pixi_jll v0.63.2+0
  [0dad84c5] ArgTools v1.2.0
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [f43a241f] Downloads v1.7.0
  [7b1f6079] FileWatching v1.11.0
  [9fa8497b] Future v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0
  [4af54fe1] LazyArtifacts v1.11.0
  [b27032c2] LibCURL v1.0.0
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.14.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [44cfe95a] Pkg v1.14.0
  [de0858da] Printf v1.11.0
  [3fa0cd96] REPL v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v1.13.0
  [9e88b42a] Serialization v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [f489334b] StyledStrings v1.13.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.5.5+0
  [deac9b47] LibCURL_jll v8.20.0+1
  [e37daf67] LibGit2_jll v1.9.4+0
  [29816b5a] LibSSH2_jll v1.11.101+0
  [14a3606d] MozillaCACerts_jll v2026.5.14
  [4536629a] OpenBLAS_jll v0.3.33+0
  [05823500] OpenLibm_jll v0.8.7+0
  [458c3c95] OpenSSL_jll v3.5.7+0
  [efcefdf7] PCRE2_jll v10.47.0+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [83775a58] Zlib_jll v1.3.2+0
  [3161d3a3] Zstd_jll v1.5.7+1
  [8e850b90] libblastrampoline_jll v5.15.0+0
  [8e850ede] nghttp2_jll v1.69.0+0
  [3f19e933] p7zip_jll v17.8.0+0
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading.
     Testing Running tests...
.....

Test Summary: | Pass  Total   Time
installation  |    5      5  15.0s
ERROR: LoadError: unsupported or misplaced expression .
Stacktrace:
 [1] top-level scope
   @ ~/.julia/packages/RCall/fTLHT/test/runtests.jl:6
 [2] include(mapexpr::Function, mod::Module, _path::String)
   @ Base Base.jl:326
 [3] top-level scope
   @ none:6
 [4] eval(m::Module, e::Any)
   @ Core boot.jl:522
 [5] exec_options(opts::Base.JLOptions)
   @ Base client.jl:321
 [6] _start()
   @ Base client.jl:596
in expression starting at /home/pkgeval/.julia/packages/RCall/fTLHT/test/runtests.jl:6

Testing failed after 49.65s

ERROR: LoadError: Package RCall errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3247
  [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587
  [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172
  [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160
  [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined]
  [7] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:223
  [8] include(mod::Module, _path::String)
    @ Base Base.jl:325
  [9] exec_options(opts::Base.JLOptions)
    @ Base client.jl:355
 [10] _start()
    @ Base client.jl:596
in expression starting at /PkgEval.jl/scripts/evaluate.jl:214

PkgEval failed after 210.5s: package tests unexpectedly errored