Package evaluation to test Molly on Julia 1.14.0-DEV.2435 (e1b2c72e96*) started at 2026-06-26T00:13:43.866 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 14.39s ################################################################################ # Installation # Installing Molly... Resolving package versions... Installed LLVMExtra_jll ─────────────── v0.0.43+1 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed DataStructures ────────────── v0.19.5 Installed AbstractTrees ─────────────── v0.4.5 Installed BioStructures ─────────────── v4.7.1 Installed MacroTools ────────────────── v0.5.16 Installed FillArrays ────────────────── v1.16.0 Installed Adapt ─────────────────────── v4.7.0 Installed CellListMap ───────────────── v0.9.17 Installed ConstructionBase ──────────── v1.6.0 Installed MKL_jll ───────────────────── v2025.2.0+0 Installed PeriodicTable ─────────────── v1.2.1 Installed ArnoldiMethod ─────────────── v0.4.0 Installed AliasTables ───────────────── v1.1.3 Installed ChunkSplitters ────────────── v3.2.0 Installed oneTBB_jll ────────────────── v2022.3.0+0 Installed AtomsBase ─────────────────── v0.5.2 Installed HypergeometricFunctions ───── v0.3.28 Installed StatsBase ─────────────────── v0.34.12 Installed CodecZlib ─────────────────── v0.7.8 Installed TranscodingStreams ────────── v0.11.3 Installed HashArrayMappedTries ──────── v0.2.0 Installed OrderedCollections ────────── v1.8.2 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed Combinatorics ─────────────── v1.1.0 Installed RecipesBase ───────────────── v1.3.4 Installed DataAPI ───────────────────── v1.16.0 Installed NearestNeighbors ──────────── v0.4.27 Installed Statistics ────────────────── v1.11.1 Installed Compat ────────────────────── v4.18.1 Installed GPUArrays ─────────────────── v11.5.8 Installed StatsAPI ──────────────────── v1.8.0 Installed CEnum ─────────────────────── v0.5.0 Installed IntelOpenMP_jll ───────────── v2025.2.0+0 Installed DataValueInterfaces ───────── v1.0.0 Installed PrecompileTools ───────────── v1.3.4 Installed StructArrays ──────────────── v0.7.3 Installed Atomix ────────────────────── v1.1.3 Installed ProgressMeter ─────────────── v1.11.0 Installed ArgCheck ──────────────────── v2.5.0 Installed UnitfulAtomic ─────────────── v1.0.0 Installed AbstractFFTs ──────────────── v1.5.0 Installed BioSymbols ────────────────── v5.2.0 Installed StaticArraysCore ──────────── v1.4.4 Installed IrrationalConstants ───────── v0.2.6 Installed GPUArraysCore ─────────────── v0.2.0 Installed Distances ─────────────────── v0.10.12 Installed StaticArrays ──────────────── v1.9.18 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed SimpleTraits ──────────────── v0.9.6 Installed Chemfiles ─────────────────── v0.10.43 Installed QuadGK ────────────────────── v2.11.3 Installed SimpleCrystals ────────────── v0.4.5 Installed Requires ──────────────────── v1.3.1 Installed LogExpFunctions ───────────── v1.0.1 Installed LLVM ──────────────────────── v9.10.0 Installed KernelAbstractions ────────── v0.9.41 Installed Distributions ─────────────── v0.25.127 Installed Parameters ────────────────── v0.12.3 Installed AtomsCalculators ──────────── v0.2.3 Installed Rmath ─────────────────────── v0.9.0 Installed ScopedValues ──────────────── v1.6.2 Installed BioGenerics ───────────────── v0.1.5 Installed Unitful ───────────────────── v1.28.0 Installed StatsFuns ─────────────────── v2.2.0 Installed UnsafeAtomics ─────────────── v0.3.1 Installed XML2_jll ──────────────────── v2.15.3+0 Installed Tables ────────────────────── v1.12.1 Installed PtrArrays ─────────────────── v1.4.0 Installed SpecialFunctions ──────────── v2.8.0 Installed Reexport ──────────────────── v1.2.2 Installed Missings ──────────────────── v1.2.0 Installed AcceleratedKernels ────────── v0.4.3 Installed Setfield ──────────────────── v1.1.2 Installed TestItems ─────────────────── v1.0.0 Installed Preferences ───────────────── v1.5.2 Installed TableTraits ───────────────── v1.0.1 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed EzXML ─────────────────────── v1.2.3 Installed FFTW ──────────────────────── v1.10.0 Installed FFTW_jll ──────────────────── v3.3.12+0 Installed JLLWrappers ───────────────── v1.8.0 Installed SortingAlgorithms ─────────── v1.2.3 Installed PDMats ────────────────────── v0.11.38 Installed Chemfiles_jll ─────────────── v0.10.4+0 Installed Format ────────────────────── v1.3.7 Installed UnPack ────────────────────── v1.0.2 Installed Inflate ───────────────────── v0.1.5 Installed DocStringExtensions ───────── v0.9.5 Installed Graphs ────────────────────── v1.14.0 Installed Molly ─────────────────────── v0.23.3 Installing 7 artifacts Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact Libiconv 1.9 MiB Installed artifact Chemfiles 1.6 MiB Installed artifact XML2 2.2 MiB Installed artifact FFTW 2.2 MiB Installed artifact LLVMExtra 3.7 MiB Updating `~/.julia/environments/v1.14/Project.toml` [aa0f7f06] + Molly v0.23.3 Updating `~/.julia/environments/v1.14/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [6a4ca0a5] + AcceleratedKernels v0.4.3 [79e6a3ab] + Adapt v4.7.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [ec485272] + ArnoldiMethod v0.4.0 [a9b6321e] + Atomix v1.1.3 [a963bdd2] + AtomsBase v0.5.2 [a3e0e189] + AtomsCalculators v0.2.3 [47718e42] + BioGenerics v0.1.5 [de9282ab] + BioStructures v4.7.1 [3c28c6f8] + BioSymbols v5.2.0 [fa961155] + CEnum v0.5.0 ⌅ [69e1c6dd] + CellListMap v0.9.17 [46823bd8] + Chemfiles v0.10.43 [ae650224] + ChunkSplitters v3.2.0 [944b1d66] + CodecZlib v0.7.8 [861a8166] + Combinatorics v1.1.0 [34da2185] + Compat v4.18.1 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.5 [e2d170a0] + DataValueInterfaces v1.0.0 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.127 [ffbed154] + DocStringExtensions v0.9.5 [8f5d6c58] + EzXML v1.2.3 [7a1cc6ca] + FFTW v1.10.0 [1a297f60] + FillArrays v1.16.0 [1fa38f19] + Format v1.3.7 [0c68f7d7] + GPUArrays v11.5.8 [46192b85] + GPUArraysCore v0.2.0 [86223c79] + Graphs v1.14.0 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [d25df0c9] + Inflate v0.1.5 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.8.0 [63c18a36] + KernelAbstractions v0.9.41 [929cbde3] + LLVM v9.10.0 [2ab3a3ac] + LogExpFunctions v1.0.1 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [aa0f7f06] + Molly v0.23.3 [b8a86587] + NearestNeighbors v0.4.27 ⌅ [bac558e1] + OrderedCollections v1.8.2 [90014a1f] + PDMats v0.11.38 ⌅ [d96e819e] + Parameters v0.12.3 [7b2266bf] + PeriodicTable v1.2.1 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.3 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [7e506255] + ScopedValues v1.6.2 [efcf1570] + Setfield v1.1.2 [64031d72] + SimpleCrystals v0.4.5 [699a6c99] + SimpleTraits v0.9.6 [a2af1166] + SortingAlgorithms v1.2.3 [276daf66] + SpecialFunctions v2.8.0 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.12 [4c63d2b9] + StatsFuns v2.2.0 [09ab397b] + StructArrays v0.7.3 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [1c621080] + TestItems v1.0.0 [3bb67fe8] + TranscodingStreams v0.11.3 [3a884ed6] + UnPack v1.0.2 [1986cc42] + Unitful v1.28.0 [a7773ee8] + UnitfulAtomic v1.0.0 [013be700] + UnsafeAtomics v0.3.1 [78a364fa] + Chemfiles_jll v0.10.4+0 [f5851436] + FFTW_jll v3.3.12+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [dad2f222] + LLVMExtra_jll v0.0.43+1 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] + MKL_jll v2025.2.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [02c8fc9c] + XML2_jll v2.15.3+0 [1317d2d5] + oneTBB_jll v2022.3.0+0 [0dad84c5] + ArgTools v1.2.0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.5+0 [deac9b47] + LibCURL_jll v8.20.0+1 [e37daf67] + LibGit2_jll v1.9.4+0 [29816b5a] + LibSSH2_jll v1.11.101+0 [14a3606d] + MozillaCACerts_jll v2026.5.14 [4536629a] + OpenBLAS_jll v0.3.33+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.7+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.69.0+0 [3f19e933] + p7zip_jll v17.8.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 14.17s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling project... 5.4 s ✓ TestEnv 1 dependency successfully precompiled in 6 seconds. 27 already precompiled. ERROR: LoadError: TypeError: in cglobal library name, expected Symbol, got a value of type Expr Stacktrace: [1] top-level scope @ ~/.julia/packages/LLVM_jll/2GVYx/.pkg/platform_augmentation.jl:2 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base Base.jl:326 [3] top-level scope @ ~/.julia/packages/LLVM_jll/2GVYx/.pkg/select_artifacts.jl:4 [4] include(mapexpr::Function, mod::Module, _path::String) @ Base Base.jl:326 [5] top-level scope @ none:8 [6] eval(m::Module, e::Any) @ Core boot.jl:522 [7] exec_options(opts::Base.JLOptions) @ Base client.jl:321 [8] _start() @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/LLVM_jll/2GVYx/.pkg/platform_augmentation.jl:2 in expression starting at /home/pkgeval/.julia/packages/LLVM_jll/2GVYx/.pkg/select_artifacts.jl:4 ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/RUPmD/src/julia-1.13/activate_set.jl:78 ERROR: LoadError: TypeError: in cglobal library name, expected Symbol, got a value of type Expr Stacktrace: [1] top-level scope @ ~/.julia/packages/LLVM_jll/2GVYx/.pkg/platform_augmentation.jl:2 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base Base.jl:326 [3] top-level scope @ ~/.julia/packages/LLVM_jll/2GVYx/.pkg/select_artifacts.jl:4 [4] include(mapexpr::Function, mod::Module, _path::String) @ Base Base.jl:326 [5] top-level scope @ none:8 [6] eval(m::Module, e::Any) @ Core boot.jl:522 [7] exec_options(opts::Base.JLOptions) @ Base client.jl:321 [8] _start() @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/LLVM_jll/2GVYx/.pkg/platform_augmentation.jl:2 in expression starting at /home/pkgeval/.julia/packages/LLVM_jll/2GVYx/.pkg/select_artifacts.jl:4 ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so --check-bounds=yes --pkgimages=existing -g1 -O0 --color=no --history-file=no --startup-file=no --project=/tmp/jl_qi9cwe/Project.toml --eval 'append!(empty!(Base.DEPOT_PATH), ["/home/pkgeval/.julia", "/usr/local/share/julia", "/opt/julia/local/share/julia", "/opt/julia/share/julia"]) │ append!(empty!(Base.DL_LOAD_PATH), String[]) │ │ if true │ push!(Base.LOAD_PATH, "@stdlib") │ end │ cd("/home/pkgeval/.julia/packages/LLVM_jll/2GVYx/.pkg") │ include("/home/pkgeval/.julia/packages/LLVM_jll/2GVYx/.pkg/select_artifacts.jl") │ ' --compile=min -t1 --startup-file=no x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.14.0`, ProcessExited(1)) [1] │ │ Stacktrace: │ [1] pipeline_error(proc::Base.Process) │ @ Base process.jl:612 [inlined] │ [2] read(cmd::Cmd) │ @ Base process.jl:490 │ [3] collect_artifacts(pkg_root::String; platform::Base.BinaryPlatforms.Platform, include_lazy::Bool) │ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:1340 │ [4] (::Pkg.Operations.var"#71#72"{Base.BinaryPlatforms.Platform, Bool})(::Tuple{String, UUID}) │ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:1412 │ [5] iterate(g::Base.Generator{Vector{Tuple{String, Union{Nothing, UUID}}}, Pkg.Operations.var"#71#72"{Base.BinaryPlatforms.Platform, Bool}}, s::Int64) │ @ Base generator.jl:48 [inlined] │ [6] collect_to!(dest::Vector{Vector{Tuple{String, Dict{String, Any}, UUID}}}, itr::Base.Generator{Vector{Tuple{String, Union{Nothing, UUID}}}, Pkg.Operations.var"#71#72"{Base.BinaryPlatforms.Platform, Bool}}, offs::Int64, st::Int64) │ @ Base array.jl:914 │ [7] collect_to_with_first!(dest::Vector{Vector{Tuple{String, Dict{String, Any}, UUID}}}, v1::Vector{Tuple{String, Dict{String, Any}, UUID}}, itr::Base.Generator{Vector{Tuple{String, Union{Nothing, UUID}}}, Pkg.Operations.var"#71#72"{Base.BinaryPlatforms.Platform, Bool}}, st::Int64) │ @ Base array.jl:869 [inlined] │ [8] _collect(c::Vector{Tuple{String, Union{Nothing, UUID}}}, itr::Base.Generator{Vector{Tuple{String, Union{Nothing, UUID}}}, Pkg.Operations.var"#71#72"{Base.BinaryPlatforms.Platform, Bool}}, ::Base.EltypeUnknown, isz::Base.HasShape{1}) │ @ Base array.jl:863 │ [9] collect_similar(cont::Vector{Tuple{String, Union{Nothing, UUID}}}, itr::Base.Generator{Vector{Tuple{String, Union{Nothing, UUID}}}, Pkg.Operations.var"#71#72"{Base.BinaryPlatforms.Platform, Bool}}) │ @ Base array.jl:768 │ [10] map(f::Pkg.Operations.var"#71#72"{Base.BinaryPlatforms.Platform, Bool}, A::Vector{Tuple{String, Union{Nothing, UUID}}}) │ @ Base abstractarray.jl:3468 [inlined] │ [11] download_artifacts(ctx::Pkg.Types.Context, pkgs::Base.ValueIterator{Dict{UUID, Pkg.Types.PackageEntry}}; platform::Base.BinaryPlatforms.Platform, julia_version::VersionNumber, verbose::Bool, io::Base.DevNull, include_lazy::Bool) │ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:1410 │ [12] download_artifacts(ctx::Pkg.Types.Context; platform::Base.BinaryPlatforms.Platform, julia_version::VersionNumber, verbose::Bool, io::Base.DevNull, include_lazy::Bool) │ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:1558 │ [13] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}, level::UpgradeLevel; skip_writing_project::Bool, preserve::Nothing) │ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2627 │ [14] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; level::UpgradeLevel, mode::PackageMode, preserve::Nothing, update_registry::Bool, skip_writing_project::Bool, workspace::Bool, kwargs::@Kwargs{io::Base.DevNull}) │ @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:480 │ [15] up(ctx::Pkg.Types.Context; kwargs::@Kwargs{level::UpgradeLevel, mode::PackageMode, update_registry::Bool, skip_writing_project::Bool, io::Base.DevNull}) │ @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:177 [inlined] │ [16] resolve(ctx::Pkg.Types.Context; skip_writing_project::Bool, kwargs::@Kwargs{io::Base.DevNull}) │ @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:486 [inlined] │ [17] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/RUPmD/src/julia-1.13/activate_set.jl:83 │ [18] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/RUPmD/src/julia-1.13/activate_set.jl:9 │ [19] (::var"#10#11")() │ @ Main /PkgEval.jl/scripts/precompile.jl:21 │ [20] (::var"#3#4"{var"#10#11"})() │ @ Main /PkgEval.jl/scripts/common.jl:52 [inlined] │ [21] with(::var"#3#4"{var"#10#11"}, ::Pair{Base.ScopedValues.ScopedValue{IO}, Base.DevNull}) │ @ Base.ScopedValues scopedvalues.jl:324 │ [22] capture_pkg_output(f::var"#10#11"; suppress::Bool) │ @ Main /PkgEval.jl/scripts/common.jl:51 │ [23] suppress_pkg_output(f::Function) │ @ Main /PkgEval.jl/scripts/common.jl:35 │ [24] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:19 │ [25] include(mod::Module, _path::String) │ @ Base Base.jl:325 │ [26] exec_options(opts::Base.JLOptions) │ @ Base client.jl:355 │ [27] _start() │ @ Base client.jl:596 └ @ Main /PkgEval.jl/scripts/precompile.jl:24 Activating project at `~/.julia/environments/v1.14` Precompiling package dependencies... Precompiling project... 3.4 s ✓ MacroTools 0.5 s ✓ TestItems 0.5 s ✓ Reexport 0.6 s ✓ Adapt 0.8 s ✓ Statistics 0.5 s ✓ DataAPI 0.8 s ✓ ConstructionBase 1.6 s ✓ IrrationalConstants 0.5 s ✓ UnPack 0.5 s ✓ DataValueInterfaces 0.7 s ✓ StaticArraysCore 0.5 s ✓ StatsAPI 0.6 s ✓ ChunkSplitters 2.8 s ✓ UnsafeAtomics 1.1 s ✓ OrderedCollections 1.6 s ✓ Format 0.6 s ✓ HashArrayMappedTries 0.8 s ✓ DocStringExtensions 0.9 s ✓ AbstractTrees 0.6 s ✓ CEnum 1.5 s ✓ Combinatorics 0.8 s ✓ AbstractFFTs 1.0 s ✓ Inflate 0.6 s ✓ ArgCheck 2.0 s ✓ FillArrays 0.5 s ✓ PtrArrays 1.0 s ✓ TranscodingStreams 0.5 s ✓ IteratorInterfaceExtensions 0.9 s ✓ Requires 2.3 s ✓ PDMats 2.3 s ✓ ProgressMeter 33.5 s ✓ Unitful 0.8 s ✓ Compat 1.2 s ✓ Preferences 2.8 s ✓ SimpleTraits 1.0 s ✓ GPUArraysCore 1.7 s ✓ Adapt → AdaptSparseArraysExt 1.7 s ✓ Statistics → SparseArraysExt 0.7 s ✓ Missings 0.6 s ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 1.1 s ✓ Distances 0.7 s ✓ Atomix 0.8 s ✓ Parameters 3.4 s ✓ DataStructures 0.6 s ✓ ScopedValues 1.0 s ✓ LogExpFunctions 3.6 s ✓ AbstractFFTs → AbstractFFTsTestExt 2.1 s ✓ FillArrays → FillArraysSparseArraysExt 1.0 s ✓ FillArrays → FillArraysStatisticsExt 0.7 s ✓ AliasTables 0.6 s ✓ BioGenerics 0.7 s ✓ CodecZlib 0.5 s ✓ TableTraits 2.0 s ✓ FillArrays → FillArraysPDMatsExt 1.8 s ✓ Unitful → PrintfExt 1.7 s ✓ Unitful → ConstructionBaseUnitfulExt 0.5 s ✓ Compat → CompatLinearAlgebraExt 1.9 s ✓ JLLWrappers 1.5 s ✓ PrecompileTools 2.1 s ✓ Setfield 1.6 s ✓ Distances → DistancesSparseArraysExt 0.7 s ✓ SortingAlgorithms 1.9 s ✓ QuadGK 1.6 s ✓ Tables 8.7 s ✓ UnitfulAtomic 5.9 s ✓ PeriodicTable 2.0 s ✓ Chemfiles_jll 6.1 s ✓ IntelOpenMP_jll 5.8 s ✓ LLVMExtra_jll 2.0 s ✓ Libiconv_jll 5.5 s ✓ oneTBB_jll 1.9 s ✓ FFTW_jll 1.9 s ✓ Rmath_jll 2.0 s ✓ OpenSpecFun_jll 3.2 s ✓ RecipesBase 2.8 s ✓ BioSymbols 14.5 s ✓ StaticArrays 5.1 s ✓ StatsBase 1.4 s ✓ StructArrays 15.9 s ✓ LLVM 1.7 s ✓ XML2_jll  Downloading artifact: IntelOpenMP  Downloading artifact: oneTBB 12.3 s ✓ MKL_jll 1.7 s ✓ Rmath 5.0 s ✓ SpecialFunctions 12.8 s ✓ BioStructures 2.0 s ✓ StaticArrays → StaticArraysStatisticsExt 3.4 s ✓ ArnoldiMethod 2.0 s ✓ Adapt → AdaptStaticArraysExt 1.9 s ✓ ConstructionBase → ConstructionBaseStaticArraysExt 2.3 s ✓ FillArrays → FillArraysStaticArraysExt 5.6 s ✓ AtomsBase 2.1 s ✓ PDMats → StatsBaseExt 1.9 s ✓ StructArrays → StructArraysSparseArraysExt 1.0 s ✓ StructArrays → StructArraysLinearAlgebraExt 1.0 s ✓ StructArrays → StructArraysAdaptExt 2.1 s ✓ StructArrays → StructArraysStaticArraysExt 5.7 s ✓ UnsafeAtomics → UnsafeAtomicsLLVM 1.9 s ✓ EzXML 3.4 s ✓ FFTW 2.4 s ✓ HypergeometricFunctions 8.4 s ✓ NearestNeighbors 11.0 s ✓ Graphs 8.6 s ✓ KernelAbstractions 26.6 s ✓ CellListMap 6.4 s ✓ Chemfiles 5.8 s ✓ AtomsCalculators 5.4 s ✓ SimpleCrystals 2.3 s ✓ StatsFuns 2.4 s ✓ KernelAbstractions → LinearAlgebraExt 3.9 s ✓ KernelAbstractions → SparseArraysExt 2.8 s ✓ StructArrays → StructArraysGPUArraysCoreExt 10.7 s ✓ Distributions 7.9 s ✓ AcceleratedKernels 16.3 s ✓ GPUArrays 5.1 s ✓ Distributions → DistributionsTestExt 36.6 s ✓ Molly 116 dependencies successfully precompiled in 429 seconds. 37 already precompiled. 1 dependency had output during precompilation: ┌ MKL_jll │ Downloading artifact: IntelOpenMP │ Downloading artifact: oneTBB └ Precompilation completed after 481.83s ################################################################################ # Testing # Testing Molly ERROR: LoadError: TypeError: in cglobal library name, expected Symbol, got a value of type Expr Stacktrace: [1] top-level scope @ ~/.julia/packages/LLVM_jll/2GVYx/.pkg/platform_augmentation.jl:2 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base Base.jl:326 [3] top-level scope @ ~/.julia/packages/LLVM_jll/2GVYx/.pkg/select_artifacts.jl:4 [4] include(mapexpr::Function, mod::Module, _path::String) @ Base Base.jl:326 [5] top-level scope @ none:8 [6] eval(m::Module, e::Any) @ Core boot.jl:522 [7] exec_options(opts::Base.JLOptions) @ Base client.jl:321 [8] _start() @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/LLVM_jll/2GVYx/.pkg/platform_augmentation.jl:2 in expression starting at /home/pkgeval/.julia/packages/LLVM_jll/2GVYx/.pkg/select_artifacts.jl:4 Testing failed after 10.71s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 -O0 --color=no --history-file=no --startup-file=no --project=/tmp/jl_uCjRVr/Project.toml --eval 'append!(empty!(Base.DEPOT_PATH), ["/home/pkgeval/.julia", "/usr/local/share/julia", "/opt/julia/local/share/julia", "/opt/julia/share/julia"]) append!(empty!(Base.DL_LOAD_PATH), String[]) if true push!(Base.LOAD_PATH, "@stdlib") end cd("/home/pkgeval/.julia/packages/LLVM_jll/2GVYx/.pkg") include("/home/pkgeval/.julia/packages/LLVM_jll/2GVYx/.pkg/select_artifacts.jl") ' --compile=min -t1 --startup-file=no x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.14.0`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error(proc::Base.Process) @ Base process.jl:612 [inlined] [2] read(cmd::Cmd) @ Base process.jl:490 [3] collect_artifacts(pkg_root::String; platform::Base.BinaryPlatforms.Platform, include_lazy::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:1340 [4] (::Pkg.Operations.var"#71#72"{Base.BinaryPlatforms.Platform, Bool})(::Tuple{String, UUID}) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:1412 [5] iterate(g::Base.Generator{Vector{Tuple{String, Union{Nothing, UUID}}}, Pkg.Operations.var"#71#72"{Base.BinaryPlatforms.Platform, Bool}}, s::Int64) @ Base generator.jl:48 [inlined] [6] collect_to!(dest::Vector{Vector{Tuple{String, Dict{String, Any}, UUID}}}, itr::Base.Generator{Vector{Tuple{String, Union{Nothing, UUID}}}, Pkg.Operations.var"#71#72"{Base.BinaryPlatforms.Platform, Bool}}, offs::Int64, st::Int64) @ Base array.jl:914 [7] collect_to_with_first!(dest::Vector{Vector{Tuple{String, Dict{String, Any}, UUID}}}, v1::Vector{Tuple{String, Dict{String, Any}, UUID}}, itr::Base.Generator{Vector{Tuple{String, Union{Nothing, UUID}}}, Pkg.Operations.var"#71#72"{Base.BinaryPlatforms.Platform, Bool}}, st::Int64) @ Base array.jl:869 [inlined] [8] _collect(c::Vector{Tuple{String, Union{Nothing, UUID}}}, itr::Base.Generator{Vector{Tuple{String, Union{Nothing, UUID}}}, Pkg.Operations.var"#71#72"{Base.BinaryPlatforms.Platform, Bool}}, ::Base.EltypeUnknown, isz::Base.HasShape{1}) @ Base array.jl:863 [9] collect_similar(cont::Vector{Tuple{String, Union{Nothing, UUID}}}, itr::Base.Generator{Vector{Tuple{String, Union{Nothing, UUID}}}, Pkg.Operations.var"#71#72"{Base.BinaryPlatforms.Platform, Bool}}) @ Base array.jl:768 [10] map(f::Pkg.Operations.var"#71#72"{Base.BinaryPlatforms.Platform, Bool}, A::Vector{Tuple{String, Union{Nothing, UUID}}}) @ Base abstractarray.jl:3468 [inlined] [11] download_artifacts(ctx::Pkg.Types.Context, pkgs::Base.ValueIterator{Dict{UUID, Pkg.Types.PackageEntry}}; platform::Base.BinaryPlatforms.Platform, julia_version::VersionNumber, verbose::Bool, io::IOContext{IO}, include_lazy::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:1410 [12] download_artifacts(ctx::Pkg.Types.Context; platform::Base.BinaryPlatforms.Platform, julia_version::VersionNumber, verbose::Bool, io::IOContext{IO}, include_lazy::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:1558 [13] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}, level::UpgradeLevel; skip_writing_project::Bool, preserve::Nothing) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2627 [14] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; level::UpgradeLevel, mode::PackageMode, preserve::Nothing, update_registry::Bool, skip_writing_project::Bool, workspace::Bool, kwargs::@Kwargs{io::Base.DevNull}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:480 [15] up(ctx::Pkg.Types.Context; kwargs::@Kwargs{level::UpgradeLevel, mode::PackageMode, update_registry::Bool, skip_writing_project::Bool, io::Base.DevNull}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:177 [inlined] [16] resolve(ctx::Pkg.Types.Context; skip_writing_project::Bool, kwargs::@Kwargs{io::Base.DevNull}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:486 [inlined] [17] (::Pkg.Operations.var"#228#229"{Bool, Bool, Bool, Pkg.Operations.var"#249#250"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec, String, Bool, Pkg.Types.EnvCache})() @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2889 [18] with_temp_env(fn::Pkg.Operations.var"#228#229"{Bool, Bool, Bool, Pkg.Operations.var"#249#250"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec, String, Bool, Pkg.Types.EnvCache}, temp_env::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2816 [19] sandbox_with_temp_env(fn::Pkg.Operations.var"#249#250"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, ctx::Pkg.Types.Context, target::PackageSpec, tmp::String, has_sandbox_project::Bool, sandbox_env::Pkg.Types.EnvCache; force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2873 [inlined] [20] (::Pkg.Operations.var"#233#234"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#249#250"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec, String, Nothing, String})(tmp::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2983 [21] mktempdir(fn::Pkg.Operations.var"#233#234"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#249#250"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec, String, Nothing, String}, parent::String; prefix::String) @ Base.Filesystem file.jl:949 [22] mktempdir(fn::Pkg.Operations.var"#233#234"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#249#250"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec, String, Nothing, String}, parent::String) @ Base.Filesystem file.jl:945 [inlined] [23] sandbox(fn::Pkg.Operations.var"#249#250"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, ctx::Pkg.Types.Context, target::PackageSpec, sandbox_path::String, sandbox_project_override_in::Nothing; preferences::Dict{String, Any}, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2929 [inlined] [24] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3200 [25] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 [26] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [27] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [28] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] [29] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [30] include(mod::Module, _path::String) @ Base Base.jl:325 [31] exec_options(opts::Base.JLOptions) @ Base client.jl:355 [32] _start() @ Base client.jl:596 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 558.57s: there were unidentified errors