Package evaluation to test PyHCTSA on Julia 1.14.0-DEV.2386 (9e0b0ca1f2*) started at 2026-06-16T19:24:18.157 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 14.68s ################################################################################ # Installation # Installing PyHCTSA... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [4f3a0022] + PyHCTSA v0.1.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [992eb4ea] + CondaPkg v0.2.36 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [0703355e] + DimensionalData v0.30.1 [411431e0] + Extents v0.1.6 [85a1e053] + Interfaces v0.3.2 [8197267c] + IntervalSets v0.7.14 [41ab1584] + InvertedIndices v1.3.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.8.0 [682c06a0] + JSON v1.6.1 [1914dd2f] + MacroTools v0.5.16 [0b3b1443] + MicroMamba v0.1.15 [d6ea422f] + MoreMaps v0.3.0 ⌅ [bac558e1] + OrderedCollections v1.8.2 [69de0a69] + Parsers v2.8.5 [fa939f87] + Pidfile v1.3.0 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [33c8b6b6] + ProgressLogging v0.1.6 [4f3a0022] + PyHCTSA v0.1.0 [6099a3de] + PythonCall v0.9.35 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [6c6a2e73] + Scratch v1.3.0 [10745b16] + Statistics v1.11.1 [ec057cc2] + StructUtils v2.8.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [f3112013] + TimeseriesFeatures v0.7.0 [e17b2a0c] + UnsafePointers v1.0.0 [f8abcde7] + micromamba_jll v2.3.1+0 [4d7b5844] + pixi_jll v0.63.2+0 [0dad84c5] + ArgTools v1.2.0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.3+0 [deac9b47] + LibCURL_jll v8.20.0+1 [e37daf67] + LibGit2_jll v1.9.4+0 [29816b5a] + LibSSH2_jll v1.11.101+0 [14a3606d] + MozillaCACerts_jll v2026.5.14 [4536629a] + OpenBLAS_jll v0.3.33+0 [458c3c95] + OpenSSL_jll v3.5.7+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.69.0+0 [3f19e933] + p7zip_jll v17.8.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 4.47s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling project... 2.2 s ✓ pandoc_jll 2.1 s ✓ agg_jll 3.1 s ✓ MoreMaps → DimensionalDataExt  CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PyHCTSA/273al/CondaPkg.toml  CondaPkg Found dependencies: /home/pkgeval/.julia/packages/CondaPkg/lKlVY/CondaPkg.toml  CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/5WGSP/CondaPkg.toml  CondaPkg Resolving changes  + openssl  + pyhctsa (pip)  + python  + uv  CondaPkg Initialising pixi  │ /home/pkgeval/.julia/artifacts/4ae17cee0bd922f66b2c72bf2f01c22481a5ec19/bin/pixi  │ init  │ --format pixi  └ /tmp/jl_Vzp6wL/.CondaPkg ✔ Created /tmp/jl_Vzp6wL/.CondaPkg/pixi.toml  CondaPkg Wrote /tmp/jl_Vzp6wL/.CondaPkg/pixi.toml  │ [dependencies]  │ openssl = ">=3, <3.6"  │ uv = ">=0.4"  │  │ [dependencies.python]  │ version = ">=3.10,!=3.14.0,!=3.14.1,<4"  │ build = "*cp*"  │ channel = "conda-forge"  │  │ [pypi-dependencies.pyhctsa]  │ rev = "main"  │ git = "https://github.com/dynamicsandneuralsystems/pyhctsa/"  │  │ [workspace]  │ name = ".CondaPkg"  │ description = "automatically generated by CondaPkg.jl"  │ platforms = ["linux-64"]  │ channel-priority = "strict"  └ channels = ["conda-forge"]  CondaPkg Installing packages  │ /home/pkgeval/.julia/artifacts/4ae17cee0bd922f66b2c72bf2f01c22481a5ec19/bin/pixi  │ install  └ --manifest-path /tmp/jl_Vzp6wL/.CondaPkg/pixi.toml ✔ The default environment has been installed. 85.0 s ✓ DimensionalData → DimensionalDataPythonCallExt 8.0 s ✓ Asciicast 4.4 s ✓ TimeseriesFeatures 3.3 s ✓ TimeseriesFeatures → StatsBaseExt 20.7 s ✓ PyHCTSA 8 dependencies successfully precompiled in 131 seconds. 122 already precompiled. 1 dependency had output during precompilation: ┌ DimensionalData → DimensionalDataPythonCallExt │ CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PyHCTSA/273al/CondaPkg.toml │ CondaPkg Found dependencies: /home/pkgeval/.julia/packages/CondaPkg/lKlVY/CondaPkg.toml │ CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/5WGSP/CondaPkg.toml │ CondaPkg Resolving changes │ + openssl │ + pyhctsa (pip) │ + python │ + uv │ CondaPkg Initialising pixi │ │ /home/pkgeval/.julia/artifacts/4ae17cee0bd922f66b2c72bf2f01c22481a5ec19/bin/pixi │ │ init │ │ --format pixi │ └ /tmp/jl_Vzp6wL/.CondaPkg │ ✔ Created /tmp/jl_Vzp6wL/.CondaPkg/pixi.toml │ CondaPkg Wrote /tmp/jl_Vzp6wL/.CondaPkg/pixi.toml │ │ [dependencies] │ │ openssl = ">=3, <3.6" │ │ uv = ">=0.4" │ │ │ │ [dependencies.python] │ │ version = ">=3.10,!=3.14.0,!=3.14.1,<4" │ │ build = "*cp*" │ │ channel = "conda-forge" │ │ │ │ [pypi-dependencies.pyhctsa] │ │ rev = "main" │ │ git = "https://github.com/dynamicsandneuralsystems/pyhctsa/" │ │ │ │ [workspace] │ │ name = ".CondaPkg" │ │ description = "automatically generated by CondaPkg.jl" │ │ platforms = ["linux-64"] │ │ channel-priority = "strict" │ └ channels = ["conda-forge"] │ CondaPkg Installing packages │ │ /home/pkgeval/.julia/artifacts/4ae17cee0bd922f66b2c72bf2f01c22481a5ec19/bin/pixi │ │ install │ └ --manifest-path /tmp/jl_Vzp6wL/.CondaPkg/pixi.toml │ ✔ The default environment has been installed. └ Precompilation completed after 152.23s ################################################################################ # Testing # Testing PyHCTSA Status `/tmp/jl_KLiZDM/Project.toml` [2600d445] Asciicast v0.1.3 [6e4b80f9] BenchmarkTools v1.8.0 [a93c6f00] DataFrames v1.8.2 [682c06a0] JSON v1.6.1 [d6ea422f] MoreMaps v0.3.0 [4f3a0022] PyHCTSA v0.1.0 [6099a3de] PythonCall v0.9.35 [10745b16] Statistics v1.11.1 [2913bbd2] StatsBase v0.34.11 [bd369af6] Tables v1.12.1 [f8b46487] TestItemRunner v1.1.5 [1c621080] TestItems v1.0.0 [f3112013] TimeseriesFeatures v0.7.0 [8ba89e20] Distributed v1.11.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_KLiZDM/Manifest.toml` [a4c015fc] ANSIColoredPrinters v0.0.1 [1520ce14] AbstractTrees v0.4.5 [66dad0bd] AliasTables v1.1.3 [2600d445] Asciicast v0.1.3 [6e4b80f9] BenchmarkTools v1.8.0 [944b1d66] CodecZlib v0.7.8 [34da2185] Compat v4.18.1 [992eb4ea] CondaPkg v0.2.36 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.2 [864edb3b] DataStructures v0.19.5 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [0703355e] DimensionalData v0.30.1 [ffbed154] DocStringExtensions v0.9.5 [e30172f5] Documenter v1.17.0 [411431e0] Extents v0.1.6 [d7ba0133] Git v1.5.0 [b5f81e59] IOCapture v1.0.0 [842dd82b] InlineStrings v1.4.5 [85a1e053] Interfaces v0.3.2 [8197267c] IntervalSets v0.7.14 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.8.0 [682c06a0] JSON v1.6.1 [0f8b85d8] JSON3 v1.14.3 [b964fa9f] LaTeXStrings v1.4.0 [0e77f7df] LazilyInitializedFields v1.3.0 [2ab3a3ac] LogExpFunctions v1.0.1 [1914dd2f] MacroTools v0.5.16 [d0879d2d] MarkdownAST v0.1.3 [0b3b1443] MicroMamba v0.1.15 [e1d29d7a] Missings v1.2.0 [d6ea422f] MoreMaps v0.3.0 ⌅ [bac558e1] OrderedCollections v1.8.2 [69de0a69] Parsers v2.8.5 [fa939f87] Pidfile v1.3.0 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [08abe8d2] PrettyTables v3.3.2 [33c8b6b6] ProgressLogging v0.1.6 [43287f4e] PtrArrays v1.4.0 [4f3a0022] PyHCTSA v0.1.0 [6099a3de] PythonCall v0.9.35 [189a3867] Reexport v1.2.2 [2792f1a3] RegistryInstances v0.1.0 [ae029012] Requires v1.3.1 [6c6a2e73] Scratch v1.3.0 [91c51154] SentinelArrays v1.4.10 [a2af1166] SortingAlgorithms v1.2.2 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.11 [892a3eda] StringManipulation v0.4.4 [856f2bd8] StructTypes v1.11.0 [ec057cc2] StructUtils v2.8.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [f8b46487] TestItemRunner v1.1.5 [1c621080] TestItems v1.0.0 [f3112013] TimeseriesFeatures v0.7.0 [3bb67fe8] TranscodingStreams v0.11.3 [e17b2a0c] UnsafePointers v1.0.0 [2e619515] Expat_jll v2.8.1+0 [020c3dae] Git_LFS_jll v3.7.1+0 [f8c6e375] Git_jll v2.54.0+0 [94ce4f54] Libiconv_jll v1.18.0+0 [9bd350c2] OpenSSH_jll v10.3.1+0 [5233c530] agg_jll v1.4.3+0 [f8abcde7] micromamba_jll v2.3.1+0 [c5432543] pandoc_jll v3.6.4+0 [4d7b5844] pixi_jll v0.63.2+0 [0dad84c5] ArgTools v1.2.0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.14.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [9abbd945] Profile v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.13.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.5.3+0 [deac9b47] LibCURL_jll v8.20.0+1 [e37daf67] LibGit2_jll v1.9.4+0 [29816b5a] LibSSH2_jll v1.11.101+0 [14a3606d] MozillaCACerts_jll v2026.5.14 [4536629a] OpenBLAS_jll v0.3.33+0 [458c3c95] OpenSSL_jll v3.5.7+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.69.0+0 [3f19e933] p7zip_jll v17.8.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PyHCTSA/273al/CondaPkg.toml CondaPkg Found dependencies: /home/pkgeval/.julia/packages/CondaPkg/lKlVY/CondaPkg.toml CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/5WGSP/CondaPkg.toml CondaPkg Resolving changes + openssl + pyhctsa (pip) + python + uv CondaPkg Initialising pixi │ /home/pkgeval/.julia/artifacts/4ae17cee0bd922f66b2c72bf2f01c22481a5ec19/bin/pixi │ init │ --format pixi └ /tmp/jl_KLiZDM/.CondaPkg ✔ Created /tmp/jl_KLiZDM/.CondaPkg/pixi.toml CondaPkg Wrote /tmp/jl_KLiZDM/.CondaPkg/pixi.toml │ [dependencies] │ openssl = ">=3, <3.6" │ uv = ">=0.4" │ │ [dependencies.python] │ version = ">=3.10,!=3.14.0,!=3.14.1,<4" │ build = "*cp*" │ channel = "conda-forge" │ │ [pypi-dependencies.pyhctsa] │ rev = "main" │ git = "https://github.com/dynamicsandneuralsystems/pyhctsa/" │ │ [workspace] │ name = ".CondaPkg" │ description = "automatically generated by CondaPkg.jl" │ platforms = ["linux-64"] │ channel-priority = "strict" └ channels = ["conda-forge"] CondaPkg Installing packages │ /home/pkgeval/.julia/artifacts/4ae17cee0bd922f66b2c72bf2f01c22481a5ec19/bin/pixi │ install └ --manifest-path /tmp/jl_KLiZDM/.CondaPkg/pixi.toml ✔ The default environment has been installed. pyhctsa config loads: Error During Test at /home/pkgeval/.julia/packages/PyHCTSA/273al/test/runtests.jl:32 Got exception outside of a @test InitError: Python: ModuleNotFoundError: No module named 'jpype' Python stacktrace: none Stacktrace: [1] pythrow() @ PythonCall.Core ~/.julia/packages/PythonCall/5WGSP/src/Core/err.jl:77 [2] errcheck(val::Ptr{PythonCall.C.PyObject}) @ PythonCall.Core ~/.julia/packages/PythonCall/5WGSP/src/Core/err.jl:10 [inlined] [3] pyimport(m::String) @ PythonCall.Core ~/.julia/packages/PythonCall/5WGSP/src/Core/builtins.jl:1474 [inlined] [4] __init__() @ PyHCTSA ~/.julia/packages/PyHCTSA/273al/src/PyHCTSA.jl:41 [5] run_module_init(mod::Module, i::Int64) @ Base loading.jl:1605 [6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base loading.jl:1593 [7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}; register::Bool) @ Base loading.jl:1481 [8] _require_search_from_serialized(pkg::Base.PkgId, sourcespec::Base.PkgLoadSpec, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) @ Base loading.jl:2283 [9] __require_prelocked(pkg::Base.PkgId, env::String) @ Base loading.jl:2830 [10] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base loading.jl:2685 [11] macro expansion @ loading.jl:2599 [inlined] [12] macro expansion @ lock.jl:376 [inlined] [13] __require(into::Module, mod::Symbol) @ Base loading.jl:2563 [14] require(into::Module, mod::Symbol) @ Base loading.jl:2539 [inlined] [15] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String) @ Base module.jl:36 [inlined] [16] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base module.jl:60 [17] _eval_using(to::Module, path::Expr, flags::UInt8) @ Base module.jl:137 [inlined] [18] top-level scope @ none:1 [19] eval(m::Module, e::Any) @ Core boot.jl:522 [20] run_testitem(filepath::String, use_default_usings::Bool, setups::Vector{Symbol}, package_name::String, original_code::String, line::Int64, column::Int64, test_setup_module_set::TestItemRunner.TestSetupModuleSet, testsetups::Dict{Symbol, Any}) @ TestItemRunner ~/.julia/packages/TestItemRunner/GnoVt/src/TestItemRunner.jl:95 [21] macro expansion @ ~/.julia/packages/TestItemRunner/GnoVt/src/TestItemRunner.jl:277 [inlined] [22] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2415 [inlined] [23] macro expansion @ ~/.julia/packages/TestItemRunner/GnoVt/src/TestItemRunner.jl:275 [inlined] [24] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2415 [inlined] [25] macro expansion @ ~/.julia/packages/TestItemRunner/GnoVt/src/TestItemRunner.jl:253 [inlined] [26] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2415 [inlined] [27] run_tests(path::String; filter::Nothing, verbose::Bool) @ TestItemRunner ~/.julia/packages/TestItemRunner/GnoVt/src/TestItemRunner.jl:250 [28] run_tests(path::String) @ TestItemRunner ~/.julia/packages/TestItemRunner/GnoVt/src/TestItemRunner.jl:134 [29] top-level scope @ ~/.julia/packages/PyHCTSA/273al/test/runtests.jl:5 [30] include(mapexpr::Function, mod::Module, _path::String) @ Base Base.jl:326 [31] top-level scope @ none:6 [32] eval(m::Module, e::Any) @ Core boot.jl:522 [33] exec_options(opts::Base.JLOptions) @ Base client.jl:321 [34] _start() @ Base client.jl:596 during initialization of module PyHCTSA [281] signal 11 (1): Segmentation fault in expression starting at /home/pkgeval/.julia/packages/PyHCTSA/273al/test/runtests.jl:39 _Py_TYPE at /usr/local/src/conda/python-3.14.6/Include/object.h:270:18 [inlined] PyObject_GetAttr at /usr/local/src/conda/python-3.14.6/Objects/object.c:1292:24 PyObject_GetAttr at /home/pkgeval/.julia/packages/PythonCall/5WGSP/src/C/pointers.jl:302:0 [inlined] macro expansion at /home/pkgeval/.julia/packages/PythonCall/5WGSP/src/Core/Py.jl:107:0 [inlined] pygetattr at /home/pkgeval/.julia/packages/PythonCall/5WGSP/src/Core/builtins.jl:58:0 [inlined] getproperty at /home/pkgeval/.julia/packages/PythonCall/5WGSP/src/Core/Py.jl:264:0 (pc: 37) load_config at /home/pkgeval/.julia/packages/PyHCTSA/273al/src/PyHCTSA.jl:382:0 (pc: 4) load_config at /home/pkgeval/.julia/packages/PyHCTSA/273al/src/PyHCTSA.jl:379:0 [inlined] build_mops at /home/pkgeval/.julia/packages/PyHCTSA/273al/src/PyHCTSA.jl:386:0 (pc: 1) unknown function (ip: 0x7acb9cd16692) at (unknown file) _jl_invoke at /source/src/gf.c:4380:23 [inlined] ijl_apply_generic at /source/src/gf.c:4618:12 jl_apply at /source/src/julia.h:2389:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:243:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:706:13 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897:21 ijl_eval_thunk at /source/src/toplevel.c:768:18 jl_toplevel_eval_flex at /source/src/toplevel.c:712:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:602:15 jl_toplevel_eval_flex at /source/src/toplevel.c:684:27 ijl_toplevel_eval at /source/src/toplevel.c:782:12 ijl_toplevel_eval_in at /source/src/toplevel.c:827:13 eval at ./boot.jl:522:0 (pc: 1) include_string at ./loading.jl:3132:0 (pc: 207) include_string at ./loading.jl:3142:0 (pc: 1) _jl_invoke at /source/src/gf.c:4380:23 [inlined] ijl_apply_generic at /source/src/gf.c:4618:12 jl_apply at /source/src/julia.h:2389:12 [inlined] jl_f_invokelatest at /source/src/builtins.c:918:23 #run_testitem##6 at /home/pkgeval/.julia/packages/TestItemRunner/GnoVt/src/TestItemRunner.jl:119:0 [inlined] withpath at /home/pkgeval/.julia/packages/TestItemRunner/GnoVt/src/vendored_code.jl:7:0 (pc: 72) #run_testitem##4 at /home/pkgeval/.julia/packages/TestItemRunner/GnoVt/src/TestItemRunner.jl:118:0 [inlined] cd at ./file.jl:112:0 (pc: 19) unknown function (ip: 0x7acb9cd4ba16) at (unknown file) _jl_invoke at /source/src/gf.c:4380:23 [inlined] ijl_apply_generic at /source/src/gf.c:4618:12 run_testitem at /home/pkgeval/.julia/packages/TestItemRunner/GnoVt/src/TestItemRunner.jl:117:0 (pc: 258) unknown function (ip: 0x7acbc4bbd96e) at (unknown file) _jl_invoke at /source/src/gf.c:4380:23 [inlined] ijl_apply_generic at /source/src/gf.c:4618:12 macro expansion at /home/pkgeval/.julia/packages/TestItemRunner/GnoVt/src/TestItemRunner.jl:277:0 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.14/Test/src/Test.jl:2415:0 [inlined] macro expansion at /home/pkgeval/.julia/packages/TestItemRunner/GnoVt/src/TestItemRunner.jl:275:0 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.14/Test/src/Test.jl:2415:0 [inlined] macro expansion at /home/pkgeval/.julia/packages/TestItemRunner/GnoVt/src/TestItemRunner.jl:253:0 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.14/Test/src/Test.jl:2415:0 [inlined] #run_tests#7 at /home/pkgeval/.julia/packages/TestItemRunner/GnoVt/src/TestItemRunner.jl:250:0 (pc: 1276) run_tests at /home/pkgeval/.julia/packages/TestItemRunner/GnoVt/src/TestItemRunner.jl:134:0 (pc: 1) unknown function (ip: 0x7acbc4b017d2) at (unknown file) _jl_invoke at /source/src/gf.c:4380:23 [inlined] ijl_apply_generic at /source/src/gf.c:4618:12 jl_apply at /source/src/julia.h:2389:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:243:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:706:13 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897:21 ijl_eval_thunk at /source/src/toplevel.c:768:18 jl_toplevel_eval_flex at /source/src/toplevel.c:712:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:602:15 jl_toplevel_eval_flex at /source/src/toplevel.c:684:27 ijl_toplevel_eval at /source/src/toplevel.c:782:12 ijl_toplevel_eval_in at /source/src/toplevel.c:827:13 eval at ./boot.jl:522:0 (pc: 1) include_string at ./loading.jl:3132:0 (pc: 207) _jl_invoke at /source/src/gf.c:4380:23 [inlined] ijl_apply_generic at /source/src/gf.c:4618:12 _include at ./loading.jl:3192:0 (pc: 122) include at ./Base.jl:326:0 (pc: 1) IncludeInto at ./Base.jl:327:0 (pc: 2) jfptr_IncludeInto_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4380:23 [inlined] ijl_apply_generic at /source/src/gf.c:4618:12 jl_apply at /source/src/julia.h:2389:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:243:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:706:13 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897:21 ijl_eval_thunk at /source/src/toplevel.c:768:18 jl_toplevel_eval_flex at /source/src/toplevel.c:712:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:602:15 jl_toplevel_eval_flex at /source/src/toplevel.c:684:27 ijl_toplevel_eval at /source/src/toplevel.c:782:12 ijl_toplevel_eval_in at /source/src/toplevel.c:827:13 eval at ./boot.jl:522:0 (pc: 1) exec_options at ./client.jl:321:0 (pc: 425) _start at ./client.jl:596:0 (pc: 294) jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4380:23 [inlined] ijl_apply_generic at /source/src/gf.c:4618:12 jl_apply at /source/src/julia.h:2389:12 [inlined] true_main at /source/src/jlapi.c:971:29 jl_repl_entrypoint at /source/src/jlapi.c:1138:15 main at /source/cli/loader_exe.c:58:15 unknown function (ip: 0x7acbdb51b249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S Allocations: 37970228 (Pool: 37969997; Big: 231); GC: 18 Testing failed after 143.47s ERROR: LoadError: Package PyHCTSA errored during testing (received signal: 11) Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3247 [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] [7] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [8] include(mod::Module, _path::String) @ Base Base.jl:325 [9] exec_options(opts::Base.JLOptions) @ Base client.jl:355 [10] _start() @ Base client.jl:596 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval crashed after 512.9s: a segmentation fault happened ################################################################################ # Bug reporting # The package crashed during testing (reason=segfault), but PkgEval was unable to reproduce the crash under rr (status=crash, reason=abort). For debugging, here is the tail end of the rr log: > [9fa8497b] Future v1.11.0 > [b77e0a4c] InteractiveUtils v1.11.0 > [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 > [4af54fe1] LazyArtifacts v1.11.0 > [b27032c2] LibCURL v1.0.0 > [76f85450] LibGit2 v1.11.0 > [8f399da3] Libdl v1.11.0 > [37e2e46d] LinearAlgebra v1.14.0 > [56ddb016] Logging v1.11.0 > [d6f4376e] Markdown v1.11.0 > [a63ad114] Mmap v1.11.0 > [ca575930] NetworkOptions v1.3.0 > [44cfe95a] Pkg v1.14.0 > [de0858da] Printf v1.11.0 > [9abbd945] Profile v1.11.0 > [3fa0cd96] REPL v1.11.0 > [9a3f8284] Random v1.11.0 > [ea8e919c] SHA v1.13.0 > [9e88b42a] Serialization v1.11.0 > [6462fe0b] Sockets v1.11.0 > [2f01184e] SparseArrays v1.13.0 > [f489334b] StyledStrings v1.13.0 > [fa267f1f] TOML v1.0.3 > [a4e569a6] Tar v1.10.0 > [8dfed614] Test v1.11.0 > [cf7118a7] UUIDs v1.11.0 > [4ec0a83e] Unicode v1.11.0 > [e66e0078] CompilerSupportLibraries_jll v1.5.3+0 > [deac9b47] LibCURL_jll v8.20.0+1 > [e37daf67] LibGit2_jll v1.9.4+0 > [29816b5a] LibSSH2_jll v1.11.101+0 > [14a3606d] MozillaCACerts_jll v2026.5.14 > [4536629a] OpenBLAS_jll v0.3.33+0 > [458c3c95] OpenSSL_jll v3.5.7+0 > [efcefdf7] PCRE2_jll v10.47.0+0 > [bea87d4a] SuiteSparse_jll v7.10.1+0 > [83775a58] Zlib_jll v1.3.2+0 > [3161d3a3] Zstd_jll v1.5.7+1 > [8e850b90] libblastrampoline_jll v5.15.0+0 > [8e850ede] nghttp2_jll v1.69.0+0 > [3f19e933] p7zip_jll v17.8.0+0 > Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. > Testing Running tests... > Activating project at `~/.julia/environments/pkgeval` > Activating project at `/tmp/jl_lMypoR` > Warning Some loaded packages differ from the active environment, which may affect reproducibility and trigger recompilation: > JSON: loaded v0.21.4, environment specifies v1.6.1 > Switching execution to under rr > [FATAL src/Task.cc:3848:spawn() errno: EPERM] PTRACE_SEIZE failed for tid 59; child probably died before reaching SIGSTOP > Child's message: > === Start rr backtrace: > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr[0x556001] > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr[0x695feb] > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr(_ZN2rr4Task5spawnERNS_7SessionERNS_8ScopedFdEPS3_S5_PiRKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKSt6vectorISC_SaISC_EESJ_i+0xbf0)[0x64f170] > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr(_ZN2rr13RecordSessionC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKSt6vectorIS6_SaIS6_EESD_RKNS_20DisableCPUIDFeaturesENS0_16SyscallBufferingEiNS_7BindCPUES8_PKNS_9TraceUuidEbbbb+0x317)[0x58b4b7] > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr(_ZN2rr13RecordSession6createERKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS7_EESB_RKNS_20DisableCPUIDFeaturesENS0_16SyscallBufferingEhNS_7BindCPUERKS7_PKNS_9TraceUuidEbbbbbb+0xc1e)[0x58c98e] > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr(_ZN2rr13RecordCommand3runERSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS7_EE+0x66f)[0x57eb7f] > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr(main+0x181)[0x4d5e61] > /lib/x86_64-linux-gnu/libc.so.6(+0x2724a)[0x7007116bf24a] > /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85)[0x7007116bf305] > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr[0x4d8955] > === End rr backtrace > > Testing failed after 25.15s > > ERROR: LoadError: Package PyHCTSA errored during testing (received signal: 6) > Stacktrace: > [1] pkgerror(msg::String) > @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 > [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) > @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3247 > [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) > @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 > [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) > @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 > [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) > @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 > [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) > @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] > [7] top-level scope > @ /PkgEval.jl/scripts/evaluate.jl:221 > [8] include(mod::Module, _path::String) > @ Base Base.jl:325 > [9] exec_options(opts::Base.JLOptions) > @ Base client.jl:355 > [10] _start() > @ Base client.jl:596 > in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 > > PkgEval crashed after 123.67s: the process was aborted > > > ################################################################################ > # Bug reporting > # > > Finalizing trace... > > BugReporting completed after 27.95s > Uploaded rr trace to https://s3.amazonaws.com/julialang-reports/nanosoldier/pkgeval/rr/PyHCTSA-1781624154.tar.zst