Package evaluation to test LaplacianExpectationMaximization on Julia 1.14.0-DEV.2386 (9e0b0ca1f2*) started at 2026-06-16T22:38:12.629 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 14.7s ################################################################################ # Installation # Installing LaplacianExpectationMaximization... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [610349f3] + LaplacianExpectationMaximization v0.1.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [47edcb42] + ADTypes v1.22.0 [79e6a3ab] + Adapt v4.6.1 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.25.0 [d360d2e6] + ChainRulesCore v1.26.1 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [b0b7db55] + ComponentArrays v0.15.39 [2569d6c7] + ConcreteStructs v0.2.4 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.5 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.16.0 [a0c0ee7d] + DifferentiationInterface v0.7.18 [31c24e10] + Distributions v0.25.126 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.7 [5789e2e9] + FileIO v1.19.0 [1a297f60] + FillArrays v1.16.0 [6a86dc24] + FiniteDiff v2.31.0 ⌅ [f6369f11] + ForwardDiff v0.10.39 [d9f16b24] + Functors v0.5.2 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [92d709cd] + IrrationalConstants v0.2.6 ⌅ [033835bb] + JLD2 v0.5.15 [692b3bcd] + JLLWrappers v1.8.0 [610349f3] + LaplacianExpectationMaximization v0.1.0 ⌃ [d3d80556] + LineSearches v7.5.1 ⌅ [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 ⌅ [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.4 ⌅ [429524aa] + Optim v1.13.3 [3bd65402] + Optimisers v0.4.7 [65fa8838] + OptimizationCallbacks v0.1.0 ⌅ [bac558e1] + OrderedCollections v1.8.2 [90014a1f] + PDMats v0.11.37 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.3 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [431bcebd] + SciMLPublic v1.0.1 [7e506255] + ScopedValues v1.6.2 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.8.0 [aedffcd0] + Static v1.4.0 [0d7ed370] + StaticArrayInterface v1.10.0 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.11 [4c63d2b9] + StatsFuns v2.1.0 [3bb67fe8] + TranscodingStreams v0.11.3 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [0dad84c5] + ArgTools v1.2.0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.3+0 [deac9b47] + LibCURL_jll v8.20.0+1 [e37daf67] + LibGit2_jll v1.9.4+0 [29816b5a] + LibSSH2_jll v1.11.101+0 [14a3606d] + MozillaCACerts_jll v2026.5.14 [4536629a] + OpenBLAS_jll v0.3.33+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.7+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.69.0+0 [3f19e933] + p7zip_jll v17.8.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 5.78s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling project... WARNING: Imported binding Compiler.ConstCallInfo was undeclared at import time during import to JET. WARNING: Imported binding Compiler.WorldView was undeclared at import time during import to JET. ERROR: LoadError: UndefVarError: `WorldView` not defined in `JET` Suggestion: this global was defined as `Compiler.WorldView` but not assigned a value. Stacktrace:  [1] top-level scope  @ ~/.julia/packages/JET/Nf2tu/src/abstractinterpret/typeinfer.jl:215  [2] include(mapexpr::Function, mod::Module, _path::String)  @ Base Base.jl:326  [3] top-level scope  @ ~/.julia/packages/JET/Nf2tu/src/JETBase.jl:317  [4] include(mapexpr::Function, mod::Module, _path::String)  @ Base Base.jl:326  [5] top-level scope  @ ~/.julia/packages/JET/Nf2tu/src/JET.jl:42  [6] include(mod::Module, _path::String)  @ Base Base.jl:325  [7] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3303  [8] top-level scope  @ stdin:5  [9] eval(m::Module, e::Any)  @ Core boot.jl:522  [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [11] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [12] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [13] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/JET/Nf2tu/src/abstractinterpret/typeinfer.jl:215 in expression starting at /home/pkgeval/.julia/packages/JET/Nf2tu/src/JETBase.jl:317 in expression starting at /home/pkgeval/.julia/packages/JET/Nf2tu/src/JET.jl:1 in expression starting at stdin:5 ✗ JET 3.1 s ✓ SciMLLogging → SciMLLoggingTracyExt 9.7 s ✓ OptimizationCallbacks 7.5 s ✓ SciMLBase → SciMLBaseDistributionsExt 3.1 s ✓ OptimizationBase → OptimizationForwardDiffExt 7.4 s ✓ Optimization ERROR: LoadError: UndefVarError: `hvcat_fill!` not defined in `Base` Suggestion: check for spelling errors or missing imports. Stacktrace:  [1] getproperty(x::Module, f::Symbol)  @ Base Base_compiler.jl:51  [2] top-level scope  @ ~/.julia/packages/Enzyme/SYCPx/src/internal_rules/core.jl:347  [3] include(mapexpr::Function, mod::Module, _path::String)  @ Base Base.jl:326  [4] top-level scope  @ ~/.julia/packages/Enzyme/SYCPx/src/Enzyme.jl:152  [5] include(mod::Module, _path::String)  @ Base Base.jl:325  [6] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3303  [7] top-level scope  @ stdin:5  [8] eval(m::Module, e::Any)  @ Core boot.jl:522  [9] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [10] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [11] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [12] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/Enzyme/SYCPx/src/internal_rules/core.jl:347 in expression starting at /home/pkgeval/.julia/packages/Enzyme/SYCPx/src/Enzyme.jl:1 in expression starting at stdin:5 ✗ Enzyme 13.6 s ✓ LaplacianExpectationMaximization 32.1 s ✓ OptimizationOptimJL ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("7da242da-08ed-463a-9acd-ee780be4f1d9"), "Enzyme") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base loading.jl:2837  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base loading.jl:2685  [4] macro expansion  @ loading.jl:2599 [inlined]  [5] macro expansion  @ lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base loading.jl:2563  [7] require(into::Module, mod::Symbol)  @ Base loading.jl:2539 [inlined]  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)  @ Base module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base module.jl:60  [10] _eval_using(to::Module, path::Expr, flags::UInt8)  @ Base module.jl:137 [inlined]  [11] top-level scope  @ ~/.julia/packages/Enzyme/SYCPx/ext/EnzymeGPUArraysCoreExt.jl:4  [12] include(mod::Module, _path::String)  @ Base Base.jl:325  [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3303  [14] top-level scope  @ stdin:5  [15] eval(m::Module, e::Any)  @ Core boot.jl:522  [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [17] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [18] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [19] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/Enzyme/SYCPx/ext/EnzymeGPUArraysCoreExt.jl:1 in expression starting at stdin:5 ✗ Enzyme → EnzymeGPUArraysCoreExt ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("7da242da-08ed-463a-9acd-ee780be4f1d9"), "Enzyme") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base loading.jl:2837  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base loading.jl:2685  [4] macro expansion  @ loading.jl:2599 [inlined]  [5] macro expansion  @ lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base loading.jl:2563  [7] require(into::Module, mod::Symbol)  @ Base loading.jl:2539 [inlined]  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)  @ Base module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base module.jl:60  [10] _eval_using(to::Module, path::Expr, flags::UInt8)  @ Base module.jl:137 [inlined]  [11] top-level scope  @ ~/.julia/packages/Enzyme/SYCPx/ext/EnzymeChainRulesCoreExt.jl:5  [12] include(mod::Module, _path::String)  @ Base Base.jl:325  [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3303  [14] top-level scope  @ stdin:5  [15] eval(m::Module, e::Any)  @ Core boot.jl:522  [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [17] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [18] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [19] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/Enzyme/SYCPx/ext/EnzymeChainRulesCoreExt.jl:1 in expression starting at stdin:5 ✗ Enzyme → EnzymeChainRulesCoreExt ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("7da242da-08ed-463a-9acd-ee780be4f1d9"), "Enzyme") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base loading.jl:2837  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base loading.jl:2685  [4] macro expansion  @ loading.jl:2599 [inlined]  [5] macro expansion  @ lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base loading.jl:2563  [7] require(into::Module, mod::Symbol)  @ Base loading.jl:2539 [inlined]  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)  @ Base module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base module.jl:60  [10] _eval_using(to::Module, path::Expr, flags::UInt8)  @ Base module.jl:137 [inlined]  [11] top-level scope  @ ~/.julia/packages/Enzyme/SYCPx/ext/EnzymeSpecialFunctionsExt.jl:4  [12] include(mod::Module, _path::String)  @ Base Base.jl:325  [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3303  [14] top-level scope  @ stdin:5  [15] eval(m::Module, e::Any)  @ Core boot.jl:522  [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [17] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [18] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [19] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/Enzyme/SYCPx/ext/EnzymeSpecialFunctionsExt.jl:1 in expression starting at stdin:5 ✗ Enzyme → EnzymeSpecialFunctionsExt ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("7da242da-08ed-463a-9acd-ee780be4f1d9"), "Enzyme") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base loading.jl:2837  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base loading.jl:2685  [4] macro expansion  @ loading.jl:2599 [inlined]  [5] macro expansion  @ lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base loading.jl:2563  [7] require(into::Module, mod::Symbol)  @ Base loading.jl:2539 [inlined]  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)  @ Base module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base module.jl:60  [10] _eval_using(to::Module, path::Expr, flags::UInt8)  @ Base module.jl:137 [inlined]  [11] top-level scope  @ ~/.julia/packages/Enzyme/SYCPx/ext/EnzymeLogExpFunctionsExt.jl:4  [12] include(mod::Module, _path::String)  @ Base Base.jl:325  [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3303  [14] top-level scope  @ stdin:5  [15] eval(m::Module, e::Any)  @ Core boot.jl:522  [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [17] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [18] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [19] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/Enzyme/SYCPx/ext/EnzymeLogExpFunctionsExt.jl:1 in expression starting at stdin:5 ✗ Enzyme → EnzymeLogExpFunctionsExt ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("7da242da-08ed-463a-9acd-ee780be4f1d9"), "Enzyme") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base loading.jl:2837  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base loading.jl:2685  [4] macro expansion  @ loading.jl:2599 [inlined]  [5] macro expansion  @ lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base loading.jl:2563  [7] require(into::Module, mod::Symbol)  @ Base loading.jl:2539 [inlined]  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)  @ Base module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base module.jl:60  [10] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})  @ Base module.jl:101  [11] top-level scope  @ ~/.julia/packages/DifferentiationInterface/f85Vv/ext/DifferentiationInterfaceEnzymeExt/DifferentiationInterfaceEnzymeExt.jl:32  [12] include(mod::Module, _path::String)  @ Base Base.jl:325  [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3303  [14] top-level scope  @ stdin:5  [15] eval(m::Module, e::Any)  @ Core boot.jl:522  [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [17] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [18] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [19] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/DifferentiationInterface/f85Vv/ext/DifferentiationInterfaceEnzymeExt/DifferentiationInterfaceEnzymeExt.jl:1 in expression starting at stdin:5 ✗ DifferentiationInterface → DifferentiationInterfaceEnzymeExt ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("7da242da-08ed-463a-9acd-ee780be4f1d9"), "Enzyme") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base loading.jl:2837  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base loading.jl:2685  [4] macro expansion  @ loading.jl:2599 [inlined]  [5] macro expansion  @ lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base loading.jl:2563  [7] require(into::Module, mod::Symbol)  @ Base loading.jl:2539 [inlined]  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)  @ Base module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base module.jl:60  [10] _eval_using(to::Module, path::Expr, flags::UInt8)  @ Base module.jl:137 [inlined]  [11] top-level scope  @ ~/.julia/packages/QuadGK/5mgi5/ext/QuadGKEnzymeExt.jl:4  [12] include(mod::Module, _path::String)  @ Base Base.jl:325  [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3303  [14] top-level scope  @ stdin:5  [15] eval(m::Module, e::Any)  @ Core boot.jl:522  [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [17] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [18] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [19] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/QuadGK/5mgi5/ext/QuadGKEnzymeExt.jl:2 in expression starting at stdin:5 ✗ QuadGK → QuadGKEnzymeExt ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("7da242da-08ed-463a-9acd-ee780be4f1d9"), "Enzyme") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base loading.jl:2837  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base loading.jl:2685  [4] macro expansion  @ loading.jl:2599 [inlined]  [5] macro expansion  @ lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base loading.jl:2563  [7] require(into::Module, mod::Symbol)  @ Base loading.jl:2539 [inlined]  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)  @ Base module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base module.jl:60  [10] _eval_using(to::Module, path::Expr, flags::UInt8)  @ Base module.jl:137 [inlined]  [11] top-level scope  @ ~/.julia/packages/FunctionWrappersWrappers/K5pcW/ext/FunctionWrappersWrappersEnzymeExt.jl:5  [12] include(mod::Module, _path::String)  @ Base Base.jl:325  [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3303  [14] top-level scope  @ stdin:5  [15] eval(m::Module, e::Any)  @ Core boot.jl:522  [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [17] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [18] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [19] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/FunctionWrappersWrappers/K5pcW/ext/FunctionWrappersWrappersEnzymeExt.jl:1 in expression starting at stdin:5 ✗ FunctionWrappersWrappers → FunctionWrappersWrappersEnzymeExt ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("7da242da-08ed-463a-9acd-ee780be4f1d9"), "Enzyme") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base loading.jl:2837  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base loading.jl:2685  [4] macro expansion  @ loading.jl:2599 [inlined]  [5] macro expansion  @ lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base loading.jl:2563  [7] require(into::Module, mod::Symbol)  @ Base loading.jl:2539 [inlined]  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)  @ Base module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base module.jl:60  [10] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})  @ Base module.jl:101  [11] top-level scope  @ ~/.julia/packages/SciMLBase/hLfdZ/ext/SciMLBaseEnzymeExt.jl:4  [12] include(mod::Module, _path::String)  @ Base Base.jl:325  [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3303  [14] top-level scope  @ stdin:5  [15] eval(m::Module, e::Any)  @ Core boot.jl:522  [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [17] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [18] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [19] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/SciMLBase/hLfdZ/ext/SciMLBaseEnzymeExt.jl:1 in expression starting at stdin:5 ✗ SciMLBase → SciMLBaseEnzymeExt ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("7da242da-08ed-463a-9acd-ee780be4f1d9"), "Enzyme") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base loading.jl:2837  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base loading.jl:2685  [4] macro expansion  @ loading.jl:2599 [inlined]  [5] macro expansion  @ lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base loading.jl:2563  [7] require(into::Module, mod::Symbol)  @ Base loading.jl:2539 [inlined]  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)  @ Base module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base module.jl:60  [10] _eval_using(to::Module, path::Expr, flags::UInt8)  @ Base module.jl:137 [inlined]  [11] top-level scope  @ ~/.julia/packages/OptimizationBase/ivotG/ext/OptimizationEnzymeExt.jl:8  [12] include(mod::Module, _path::String)  @ Base Base.jl:325  [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3303  [14] top-level scope  @ stdin:5  [15] eval(m::Module, e::Any)  @ Core boot.jl:522  [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [17] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [18] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [19] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/OptimizationBase/ivotG/ext/OptimizationEnzymeExt.jl:1 in expression starting at stdin:5 ✗ OptimizationBase → OptimizationEnzymeExt 14.6 s ✓ LaplacianExpectationMaximization → OptimizationExt 11.2 s ✓ LaplacianExpectationMaximization → NLoptExt ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("7da242da-08ed-463a-9acd-ee780be4f1d9"), "Enzyme") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base loading.jl:2837  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base loading.jl:2685  [4] macro expansion  @ loading.jl:2599 [inlined]  [5] macro expansion  @ lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base loading.jl:2563  [7] require(into::Module, mod::Symbol)  @ Base loading.jl:2539 [inlined]  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)  @ Base module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base module.jl:60  [10] _eval_using(to::Module, path::Expr, flags::UInt8)  @ Base module.jl:137 [inlined]  [11] top-level scope  @ ~/.julia/packages/LaplacianExpectationMaximization/as2MD/ext/EnzymeExt.jl:3  [12] include(mod::Module, _path::String)  @ Base Base.jl:325  [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3303  [14] top-level scope  @ stdin:5  [15] eval(m::Module, e::Any)  @ Core boot.jl:522  [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [17] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [18] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [19] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/LaplacianExpectationMaximization/as2MD/ext/EnzymeExt.jl:1 in expression starting at stdin:5 ✗ LaplacianExpectationMaximization → EnzymeExt 9 dependencies successfully precompiled in 174 seconds. 219 already precompiled. Precompilation completed after 195.27s ################################################################################ # Testing # Testing LaplacianExpectationMaximization Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_omORYK/Project.toml` [47edcb42] ↑ ADTypes v1.11.0 ⇒ v1.22.0 [4c88cf16] ↑ Aqua v0.8.9 ⇒ v0.8.16 [b0b7db55] ↑ ComponentArrays v0.15.19 ⇒ v0.15.39 [2569d6c7] ↑ ConcreteStructs v0.2.3 ⇒ v0.2.4 [31c24e10] ↑ Distributions v0.25.113 ⇒ v0.25.126 [7da242da] ↑ Enzyme v0.13.16 ⇒ v0.13.159 [6a86dc24] ↑ FiniteDiff v2.26.2 ⇒ v2.31.0 ⌅ [f6369f11] ↑ ForwardDiff v0.10.38 ⇒ v0.10.39 [c3a54625] ↑ JET v0.9.12 ⇒ v0.11.4 ⌅ [033835bb] ↑ JLD2 v0.5.10 ⇒ v0.5.15 [610349f3] + LaplacianExpectationMaximization v0.1.0 ⌅ [2ab3a3ac] ↑ LogExpFunctions v0.3.28 ⇒ v0.3.29 [76087f3c] ↑ NLopt v1.1.1 ⇒ v1.2.1 [3bd65402] ↑ Optimisers v0.4.1 ⇒ v0.4.7 ⌅ [7f7a1694] ↑ Optimization v4.0.5 ⇒ v4.8.0 ⌃ [36348300] ↑ OptimizationOptimJL v0.4.1 ⇒ v0.4.5 Updating `/tmp/jl_omORYK/Manifest.toml` [47edcb42] ↑ ADTypes v1.11.0 ⇒ v1.22.0 [7d9f7c33] ↑ Accessors v0.1.38 ⇒ v0.1.44 [79e6a3ab] ↑ Adapt v4.1.1 ⇒ v4.6.1 [4c88cf16] ↑ Aqua v0.8.9 ⇒ v0.8.16 [4fba245c] ↑ ArrayInterface v7.17.1 ⇒ v7.25.0 [d360d2e6] ↑ ChainRulesCore v1.25.0 ⇒ v1.26.1 [da1fd8a2] ↑ CodeTracking v1.3.6 ⇒ v3.0.2 [38540f10] ↑ CommonSolve v0.2.4 ⇒ v0.2.7 [34da2185] ↑ Compat v4.16.0 ⇒ v4.18.1 [807dbc54] + Compiler v0.1.1 [b0b7db55] ↑ ComponentArrays v0.15.19 ⇒ v0.15.39 [2569d6c7] ↑ ConcreteStructs v0.2.3 ⇒ v0.2.4 [187b0558] ↑ ConstructionBase v1.5.8 ⇒ v1.6.0 [864edb3b] ↑ DataStructures v0.18.20 ⇒ v0.19.5 [e2d170a0] - DataValueInterfaces v1.0.0 [b552c78f] ↑ DiffRules v1.15.1 ⇒ v1.16.0 [a0c0ee7d] ↑ DifferentiationInterface v0.6.23 ⇒ v0.7.18 [31c24e10] ↑ Distributions v0.25.113 ⇒ v0.25.126 [ffbed154] ↑ DocStringExtensions v0.9.3 ⇒ v0.9.5 [4e289a0a] ↑ EnumX v1.0.4 ⇒ v1.0.7 [7da242da] ↑ Enzyme v0.13.16 ⇒ v0.13.159 [f151be2c] ↑ EnzymeCore v0.8.6 ⇒ v0.8.20 [6b7a57c9] - Expronicon v0.8.5 [55351af7] + ExproniconLite v0.10.14 [5789e2e9] ↑ FileIO v1.16.6 ⇒ v1.19.0 [1a297f60] ↑ FillArrays v1.13.0 ⇒ v1.16.0 [6a86dc24] ↑ FiniteDiff v2.26.2 ⇒ v2.31.0 ⌅ [f6369f11] ↑ ForwardDiff v0.10.38 ⇒ v0.10.39 [77dc65aa] ↑ FunctionWrappersWrappers v0.1.3 ⇒ v1.9.1 [d9f16b24] ↑ Functors v0.5.1 ⇒ v0.5.2 [61eb1bfa] ↑ GPUCompiler v1.0.1 ⇒ v1.21.0 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] ↑ HypergeometricFunctions v0.3.25 ⇒ v0.3.28 [92d709cd] ↑ IrrationalConstants v0.2.2 ⇒ v0.2.6 [c3a54625] ↑ JET v0.9.12 ⇒ v0.11.4 ⌅ [033835bb] ↑ JLD2 v0.5.10 ⇒ v0.5.15 [692b3bcd] ↑ JLLWrappers v1.6.1 ⇒ v1.8.0 [ae98c720] + Jieko v0.2.1 [aa1ae85d] ↑ JuliaInterpreter v0.9.38 ⇒ v0.10.12 [70703baa] + JuliaSyntax v1.0.2 [929cbde3] ↑ LLVM v9.1.3 ⇒ v9.9.0 [610349f3] + LaplacianExpectationMaximization v0.1.0 ⌅ [1d6d02ad] ↑ LeftChildRightSiblingTrees v0.2.0 ⇒ v0.2.1 ⌃ [d3d80556] ↑ LineSearches v7.3.0 ⇒ v7.5.1 ⌅ [2ab3a3ac] ↑ LogExpFunctions v0.3.28 ⇒ v0.3.29 [e6f89c97] ↑ LoggingExtras v1.1.0 ⇒ v1.2.0 ⌅ [6f1432cf] ↑ LoweredCodeUtils v3.1.0 ⇒ v3.5.3 [d8e11817] - MLStyle v0.4.17 [1914dd2f] ↑ MacroTools v0.5.13 ⇒ v0.5.16 [2e0e35c7] + Moshi v0.3.8 ⌅ [d41bc354] ↑ NLSolversBase v7.8.3 ⇒ v7.10.0 [76087f3c] ↑ NLopt v1.1.1 ⇒ v1.2.1 [77ba4419] ↑ NaNMath v1.0.2 ⇒ v1.1.4 [d8793406] ↑ ObjectFile v0.4.2 ⇒ v0.5.0 ⌅ [429524aa] ↑ Optim v1.10.0 ⇒ v1.13.3 [3bd65402] ↑ Optimisers v0.4.1 ⇒ v0.4.7 ⌅ [7f7a1694] ↑ Optimization v4.0.5 ⇒ v4.8.0 ⌅ [bca83a33] ↑ OptimizationBase v2.4.0 ⇒ v2.14.0 [65fa8838] + OptimizationCallbacks v0.1.0 ⌃ [36348300] ↑ OptimizationOptimJL v0.4.1 ⇒ v0.4.5 ⌅ [bac558e1] ↑ OrderedCollections v1.6.3 ⇒ v1.8.2 [90014a1f] ↑ PDMats v0.11.31 ⇒ v0.11.37 [d96e819e] - Parameters v0.12.3 [d236fae5] + PreallocationTools v1.2.0 [aea7be01] ↑ PrecompileTools v1.2.1 ⇒ v1.3.4 [21216c6a] ↑ Preferences v1.4.3 ⇒ v1.5.2 [33c8b6b6] ↑ ProgressLogging v0.1.4 ⇒ v0.1.6 [92933f4c] ↑ ProgressMeter v1.10.2 ⇒ v1.11.0 [43287f4e] ↑ PtrArrays v1.2.1 ⇒ v1.4.0 [1fd47b50] ↑ QuadGK v2.11.1 ⇒ v2.11.3 ⌅ [731186ca] ↑ RecursiveArrayTools v3.27.4 ⇒ v3.54.0 [ae029012] ↑ Requires v1.3.0 ⇒ v1.3.1 [295af30f] + Revise v3.15.1 [79098fc4] ↑ Rmath v0.8.0 ⇒ v0.9.0 [7e49a35a] ↑ RuntimeGeneratedFunctions v0.5.13 ⇒ v0.5.19 ⌅ [0bca4576] ↑ SciMLBase v2.64.0 ⇒ v2.155.1 ⌅ [a6db7da4] + SciMLLogging v1.10.1 [c0aeaf25] ↑ SciMLOperators v0.3.12 ⇒ v1.22.0 [431bcebd] + SciMLPublic v1.0.1 [53ae85a6] ↑ SciMLStructures v1.6.1 ⇒ v1.10.0 [7e506255] + ScopedValues v1.6.2 [6c6a2e73] ↑ Scratch v1.2.1 ⇒ v1.3.0 [efcf1570] ↑ Setfield v1.1.1 ⇒ v1.1.2 [a2af1166] ↑ SortingAlgorithms v1.2.1 ⇒ v1.2.2 [9f842d2f] ↑ SparseConnectivityTracer v0.6.9 ⇒ v1.2.1 [0a514795] ↑ SparseMatrixColorings v0.4.10 ⇒ v0.4.27 [276daf66] ↑ SpecialFunctions v2.4.0 ⇒ v2.8.0 [aedffcd0] ↑ Static v1.1.1 ⇒ v1.4.0 [0d7ed370] ↑ StaticArrayInterface v1.8.0 ⇒ v1.10.0 [1e83bf80] ↑ StaticArraysCore v1.4.3 ⇒ v1.4.4 [82ae8749] ↑ StatsAPI v1.7.0 ⇒ v1.8.0 [2913bbd2] ↑ StatsBase v0.34.3 ⇒ v0.34.11 [4c63d2b9] ↑ StatsFuns v1.3.2 ⇒ v2.1.0 [2efcf032] ↑ SymbolicIndexingInterface v0.3.35 ⇒ v0.3.48 [3783bdb8] - TableTraits v1.0.1 [bd369af6] - Tables v1.12.0 [a759f4b9] - TimerOutputs v0.5.25 [e689c965] + Tracy v0.1.6 [781d530d] + TruncatedStacktraces v1.4.0 [3a884ed6] - UnPack v1.0.2 [7cc45869] ↑ Enzyme_jll v0.0.165+0 ⇒ v0.0.267+0 [dad2f222] ↑ LLVMExtra_jll v0.0.34+0 ⇒ v0.0.43+1 [ad6e5548] + LibTracyClient_jll v0.13.1+0 [c8ffd9c3] - MbedTLS_jll v2.28.6+0 [079eb43e] ↑ NLopt_jll v2.8.0+0 ⇒ v2.11.0+0 [efe28fd5] ↑ OpenSpecFun_jll v0.5.5+0 ⇒ v0.5.6+0 [0dad84c5] ↑ ArgTools v1.1.2 ⇒ v1.2.0 [8bf52ea8] + CRC32c v1.11.0 [f43a241f] ↑ Downloads v1.6.0 ⇒ v1.7.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [b27032c2] ↑ LibCURL v0.6.4 ⇒ v1.0.0 [37e2e46d] ↑ LinearAlgebra v1.11.0 ⇒ v1.14.0 [ca575930] ↑ NetworkOptions v1.2.0 ⇒ v1.3.0 [44cfe95a] ↑ Pkg v1.11.0 ⇒ v1.14.0 [3fa0cd96] + REPL v1.11.0 [ea8e919c] ↑ SHA v0.7.0 ⇒ v1.13.0 [2f01184e] ↑ SparseArrays v1.11.0 ⇒ v1.13.0 [f489334b] + StyledStrings v1.13.0 [e66e0078] ↑ CompilerSupportLibraries_jll v1.1.1+0 ⇒ v1.5.3+0 [deac9b47] ↑ LibCURL_jll v8.6.0+0 ⇒ v8.20.0+1 [e37daf67] ↑ LibGit2_jll v1.7.2+0 ⇒ v1.9.4+0 [29816b5a] ↑ LibSSH2_jll v1.11.0+1 ⇒ v1.11.101+0 [14a3606d] ↑ MozillaCACerts_jll v2023.12.12 ⇒ v2026.5.14 [4536629a] ↑ OpenBLAS_jll v0.3.27+1 ⇒ v0.3.33+0 [05823500] ↑ OpenLibm_jll v0.8.1+2 ⇒ v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.7+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] ↑ SuiteSparse_jll v7.7.0+0 ⇒ v7.10.1+0 [83775a58] ↑ Zlib_jll v1.2.13+1 ⇒ v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] ↑ libblastrampoline_jll v5.11.0+0 ⇒ v5.15.0+0 [8e850ede] ↑ nghttp2_jll v1.59.0+0 ⇒ v1.69.0+0 [3f19e933] ↑ p7zip_jll v17.4.0+2 ⇒ v17.8.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_omORYK/Project.toml` [47edcb42] ADTypes v1.22.0 [4c88cf16] Aqua v0.8.16 [b0b7db55] ComponentArrays v0.15.39 [2569d6c7] ConcreteStructs v0.2.4 [31c24e10] Distributions v0.25.126 [7da242da] Enzyme v0.13.159 [6a86dc24] FiniteDiff v2.31.0 ⌅ [f6369f11] ForwardDiff v0.10.39 [c3a54625] JET v0.11.4 ⌅ [033835bb] JLD2 v0.5.15 [610349f3] LaplacianExpectationMaximization v0.1.0 ⌅ [2ab3a3ac] LogExpFunctions v0.3.29 [76087f3c] NLopt v1.2.1 [3bd65402] Optimisers v0.4.7 ⌅ [7f7a1694] Optimization v4.8.0 ⌃ [36348300] OptimizationOptimJL v0.4.5 [10745b16] Statistics v1.11.1 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_omORYK/Manifest.toml` [47edcb42] ADTypes v1.22.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.44 [79e6a3ab] Adapt v4.6.1 [66dad0bd] AliasTables v1.1.3 [4c88cf16] Aqua v0.8.16 [4fba245c] ArrayInterface v7.25.0 [fa961155] CEnum v0.5.0 [d360d2e6] ChainRulesCore v1.26.1 [da1fd8a2] CodeTracking v3.0.2 [38540f10] CommonSolve v0.2.7 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [807dbc54] Compiler v0.1.1 [b0b7db55] ComponentArrays v0.15.39 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.4 [88cd18e8] ConsoleProgressMonitor v0.1.2 [187b0558] ConstructionBase v1.6.0 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.5 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.16.0 [a0c0ee7d] DifferentiationInterface v0.7.18 [31c24e10] Distributions v0.25.126 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.7 [7da242da] Enzyme v0.13.159 [f151be2c] EnzymeCore v0.8.20 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [9aa1b823] FastClosures v0.3.2 [5789e2e9] FileIO v1.19.0 [1a297f60] FillArrays v1.16.0 [6a86dc24] FiniteDiff v2.31.0 ⌅ [f6369f11] ForwardDiff v0.10.39 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v1.9.1 [d9f16b24] Functors v0.5.2 [46192b85] GPUArraysCore v0.2.0 [61eb1bfa] GPUCompiler v1.21.0 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [615f187c] IfElse v0.1.1 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [c3a54625] JET v0.11.4 ⌅ [033835bb] JLD2 v0.5.15 [692b3bcd] JLLWrappers v1.8.0 [ae98c720] Jieko v0.2.1 [aa1ae85d] JuliaInterpreter v0.10.12 [70703baa] JuliaSyntax v1.0.2 [5be7bae1] LBFGSB v0.4.1 [929cbde3] LLVM v9.9.0 [610349f3] LaplacianExpectationMaximization v0.1.0 ⌅ [1d6d02ad] LeftChildRightSiblingTrees v0.2.1 ⌃ [d3d80556] LineSearches v7.5.1 ⌅ [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 ⌅ [6f1432cf] LoweredCodeUtils v3.5.3 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [2e0e35c7] Moshi v0.3.8 ⌅ [d41bc354] NLSolversBase v7.10.0 [76087f3c] NLopt v1.2.1 [77ba4419] NaNMath v1.1.4 [d8793406] ObjectFile v0.5.0 ⌅ [429524aa] Optim v1.13.3 [3bd65402] Optimisers v0.4.7 ⌅ [7f7a1694] Optimization v4.8.0 ⌅ [bca83a33] OptimizationBase v2.14.0 [65fa8838] OptimizationCallbacks v0.1.0 ⌃ [36348300] OptimizationOptimJL v0.4.5 ⌅ [bac558e1] OrderedCollections v1.8.2 [90014a1f] PDMats v0.11.37 [85a6dd25] PositiveFactorizations v0.2.4 [d236fae5] PreallocationTools v1.2.0 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [33c8b6b6] ProgressLogging v0.1.6 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.4.0 [1fd47b50] QuadGK v2.11.3 [3cdcf5f2] RecipesBase v1.3.4 ⌅ [731186ca] RecursiveArrayTools v3.54.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [295af30f] Revise v3.15.1 [79098fc4] Rmath v0.9.0 [7e49a35a] RuntimeGeneratedFunctions v0.5.19 ⌅ [0bca4576] SciMLBase v2.155.1 ⌅ [a6db7da4] SciMLLogging v1.10.1 [c0aeaf25] SciMLOperators v1.22.0 [431bcebd] SciMLPublic v1.0.1 [53ae85a6] SciMLStructures v1.10.0 [7e506255] ScopedValues v1.6.2 [6c6a2e73] Scratch v1.3.0 [efcf1570] Setfield v1.1.2 [a2af1166] SortingAlgorithms v1.2.2 [9f842d2f] SparseConnectivityTracer v1.2.1 [0a514795] SparseMatrixColorings v0.4.27 [276daf66] SpecialFunctions v2.8.0 [aedffcd0] Static v1.4.0 [0d7ed370] StaticArrayInterface v1.10.0 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.11 [4c63d2b9] StatsFuns v2.1.0 [53d494c1] StructIO v0.3.1 [2efcf032] SymbolicIndexingInterface v0.3.48 [5d786b92] TerminalLoggers v0.1.7 [e689c965] Tracy v0.1.6 [3bb67fe8] TranscodingStreams v0.11.3 [781d530d] TruncatedStacktraces v1.4.0 [7cc45869] Enzyme_jll v0.0.267+0 [dad2f222] LLVMExtra_jll v0.0.43+1 [81d17ec3] L_BFGS_B_jll v3.0.1+0 [ad6e5548] LibTracyClient_jll v0.13.1+0 [079eb43e] NLopt_jll v2.11.0+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [0dad84c5] ArgTools v1.2.0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [8bf52ea8] CRC32c v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.14.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.13.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.5.3+0 [deac9b47] LibCURL_jll v8.20.0+1 [e37daf67] LibGit2_jll v1.9.4+0 [29816b5a] LibSSH2_jll v1.11.101+0 [14a3606d] MozillaCACerts_jll v2026.5.14 [4536629a] OpenBLAS_jll v0.3.33+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.7+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.69.0+0 [3f19e933] p7zip_jll v17.8.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... ERROR: LoadError: UndefVarError: `hvcat_fill!` not defined in `Base` Suggestion: check for spelling errors or missing imports. Stacktrace:  [1] getproperty(x::Module, f::Symbol)  @ Base Base_compiler.jl:51  [2] top-level scope  @ ~/.julia/packages/Enzyme/SYCPx/src/internal_rules/core.jl:347  [3] include(mapexpr::Function, mod::Module, _path::String)  @ Base Base.jl:326  [4] top-level scope  @ ~/.julia/packages/Enzyme/SYCPx/src/Enzyme.jl:152  [5] include(mod::Module, _path::String)  @ Base Base.jl:325  [6] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3303  [7] top-level scope  @ stdin:5  [8] eval(m::Module, e::Any)  @ Core boot.jl:522  [9] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [10] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [11] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [12] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/Enzyme/SYCPx/src/internal_rules/core.jl:347 in expression starting at /home/pkgeval/.julia/packages/Enzyme/SYCPx/src/Enzyme.jl:1 in expression starting at stdin:5 1 dependency had output during precompilation: ┌ Enzyme │ [Output was shown above] └ ERROR: LoadError: The following 1 package failed to precompile: Enzyme Failed to precompile Enzyme [7da242da-08ed-463a-9acd-ee780be4f1d9] to "/home/pkgeval/.julia/compiled/v1.14/Enzyme/jl_WYuTXl" (ProcessExited(1)). in expression starting at /home/pkgeval/.julia/packages/LaplacianExpectationMaximization/as2MD/test/runtests.jl:5 Testing failed after 83.01s ERROR: LoadError: Package LaplacianExpectationMaximization errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3247 [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] [7] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [8] include(mod::Module, _path::String) @ Base Base.jl:325 [9] exec_options(opts::Base.JLOptions) @ Base client.jl:355 [10] _start() @ Base client.jl:596 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 331.71s: package fails to precompile