Package evaluation to test SciPyDiffEq on Julia 1.14.0-DEV.2275 (3ea3bac2a3*) started at 2026-06-03T01:06:10.578 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 15.65s ################################################################################ # Installation # Installing SciPyDiffEq... Resolving package versions... Installed PyCall ─ v1.96.4 Installed Conda ── v1.10.3 Updating `~/.julia/environments/v1.14/Project.toml` [505e40e9] + SciPyDiffEq v0.2.6 Updating `~/.julia/environments/v1.14/Manifest.toml` [47edcb42] + ADTypes v1.22.0 [7d9f7c33] + Accessors v0.1.44 [79e6a3ab] + Adapt v4.6.0 [4fba245c] + ArrayInterface v7.25.0 [70df07ce] + BracketingNonlinearSolve v1.12.1 [38540f10] + CommonSolve v0.2.7 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.4 [8f4d0f93] + Conda v1.10.3 [187b0558] + ConstructionBase v1.6.0 [2b5f629d] + DiffEqBase v7.5.5 [a0c0ee7d] + DifferentiationInterface v0.7.18 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.7 [f151be2c] + EnzymeCore v0.8.20 [e2ba6199] + ExprTools v0.1.10 [7034ab61] + FastBroadcast v1.3.2 [9aa1b823] + FastClosures v0.3.2 [a4df4552] + FastPower v1.3.1 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v1.9.1 [46192b85] + GPUArraysCore v0.2.0 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [682c06a0] + JSON v1.6.0 [2ab3a3ac] + LogExpFunctions v1.0.0 [e6f89c97] + LoggingExtras v1.2.0 [1914dd2f] + MacroTools v0.5.16 [bb5d69b7] + MaybeInplace v0.1.4 [46d2c3a1] + MuladdMacro v0.2.4 [be0214bd] + NonlinearSolveBase v2.30.2 [69de0a69] + Parsers v2.8.4 [d236fae5] + PreallocationTools v1.2.0 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [438e738f] + PyCall v1.96.4 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v4.3.0 [189a3867] + Reexport v1.2.2 [7e49a35a] + RuntimeGeneratedFunctions v0.5.19 [0bca4576] + SciMLBase v3.17.0 [19f34311] + SciMLJacobianOperators v0.1.13 [a6db7da4] + SciMLLogging v2.0.0 [c0aeaf25] + SciMLOperators v1.22.0 [431bcebd] + SciMLPublic v1.0.1 [53ae85a6] + SciMLStructures v1.10.0 [505e40e9] + SciPyDiffEq v0.2.6 [efcf1570] + Setfield v1.1.2 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [ec057cc2] + StructUtils v2.8.2 [2efcf032] + SymbolicIndexingInterface v0.3.48 [a759f4b9] + TimerOutputs v0.5.29 [781d530d] + TruncatedStacktraces v1.4.0 [81def892] + VersionParsing v1.3.0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [b27032c2] + LibCURL v1.0.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.3.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.2+0 [deac9b47] + LibCURL_jll v8.20.0+1 [29816b5a] + LibSSH2_jll v1.11.101+0 [14a3606d] + MozillaCACerts_jll v2026.5.14 [4536629a] + OpenBLAS_jll v0.3.33+0 [458c3c95] + OpenSSL_jll v3.5.6+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.69.0+0 Building Conda ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/8f06b0cfa4c514c7b9546756dbae91fcfbc92dc9/build.log` Building PyCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9816a3826b0ebf49ab4926e2b18842ad8b5c8f04/build.log` Installation completed after 39.84s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling project... 7.5 s ✓ SciPyDiffEq 1 dependency successfully precompiled in 9 seconds. 110 already precompiled. Precompilation completed after 34.77s ################################################################################ # Testing # Testing SciPyDiffEq Status `/tmp/jl_j0FAP4/Project.toml` [38540f10] CommonSolve v0.2.7 [2b5f629d] DiffEqBase v7.5.5 [7d51a73a] ExplicitImports v1.15.0 [aea7be01] PrecompileTools v1.3.4 [438e738f] PyCall v1.96.4 [189a3867] Reexport v1.2.2 [0bca4576] SciMLBase v3.17.0 [505e40e9] SciPyDiffEq v0.2.6 [8dfed614] Test v1.11.0 Status `/tmp/jl_j0FAP4/Manifest.toml` [47edcb42] ADTypes v1.22.0 [7d9f7c33] Accessors v0.1.44 [79e6a3ab] Adapt v4.6.0 [4fba245c] ArrayInterface v7.25.0 [70df07ce] BracketingNonlinearSolve v1.12.1 [38540f10] CommonSolve v0.2.7 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.4 [8f4d0f93] Conda v1.10.3 [187b0558] ConstructionBase v1.6.0 [2b5f629d] DiffEqBase v7.5.5 [a0c0ee7d] DifferentiationInterface v0.7.18 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.7 [f151be2c] EnzymeCore v0.8.20 [7d51a73a] ExplicitImports v1.15.0 [e2ba6199] ExprTools v0.1.10 [7034ab61] FastBroadcast v1.3.2 [9aa1b823] FastClosures v0.3.2 [a4df4552] FastPower v1.3.1 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v1.9.1 [46192b85] GPUArraysCore v0.2.0 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [682c06a0] JSON v1.6.0 [2ab3a3ac] LogExpFunctions v1.0.0 [e6f89c97] LoggingExtras v1.2.0 [1914dd2f] MacroTools v0.5.16 [bb5d69b7] MaybeInplace v0.1.4 [46d2c3a1] MuladdMacro v0.2.4 [be0214bd] NonlinearSolveBase v2.30.2 [69de0a69] Parsers v2.8.4 [d236fae5] PreallocationTools v1.2.0 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [438e738f] PyCall v1.96.4 [3cdcf5f2] RecipesBase v1.3.4 [731186ca] RecursiveArrayTools v4.3.0 [189a3867] Reexport v1.2.2 [7e49a35a] RuntimeGeneratedFunctions v0.5.19 [0bca4576] SciMLBase v3.17.0 [19f34311] SciMLJacobianOperators v0.1.13 [a6db7da4] SciMLLogging v2.0.0 [c0aeaf25] SciMLOperators v1.22.0 [431bcebd] SciMLPublic v1.0.1 [53ae85a6] SciMLStructures v1.10.0 [505e40e9] SciPyDiffEq v0.2.6 [efcf1570] Setfield v1.1.2 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [ec057cc2] StructUtils v2.8.2 [2efcf032] SymbolicIndexingInterface v0.3.48 [a759f4b9] TimerOutputs v0.5.29 [781d530d] TruncatedStacktraces v1.4.0 [81def892] VersionParsing v1.3.0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.14.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.13.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [f489334b] StyledStrings v1.13.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.5.2+0 [deac9b47] LibCURL_jll v8.20.0+1 [e37daf67] LibGit2_jll v1.9.4+0 [29816b5a] LibSSH2_jll v1.11.101+0 [14a3606d] MozillaCACerts_jll v2026.5.14 [4536629a] OpenBLAS_jll v0.3.33+0 [458c3c95] OpenSSL_jll v3.5.6+0 [efcefdf7] PCRE2_jll v10.47.0+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.69.0+0 [3f19e933] p7zip_jll v17.8.0+0 Testing Running tests... [ Info: Installing scipy.integrate via the Conda scipy package... [ Info: Running `conda config --add channels conda-forge --file /home/pkgeval/.julia/conda/3/x86_64/condarc-julia.yml --force` in root environment [ Info: Running `conda install -q -y scipy` in root environment Channels: - conda-forge Platform: linux-64 Collecting package metadata (repodata.json): ...working... done Solving environment: ...working... done ## Package Plan ## environment location: /home/pkgeval/.julia/conda/3/x86_64 added / updated specs: - scipy The following packages will be downloaded: package | build ---------------------------|----------------- scipy-1.17.1 | py313h4b8bb8b_1 16.4 MB conda-forge ------------------------------------------------------------ Total: 16.4 MB The following NEW packages will be INSTALLED: scipy conda-forge/linux-64::scipy-1.17.1-py313h4b8bb8b_1 Preparing transaction: ...working... done Verifying transaction: ...working... done Executing transaction: ...working... done Test Summary: | Pass Total Time ExplicitImports | 2 2 43.2s Unreachable reached at 0x74f173245ba0 [163] signal 4 (2): Illegal instruction in expression starting at /home/pkgeval/.julia/packages/SciPyDiffEq/ozRpj/test/runtests.jl:12 copy at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/pyarray.jl:150:0 [inlined] pyocopy at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/pyarray.jl:252:0 (pc: 16) unknown function (ip: 0x74f19c10e4ef) at (unknown file) Allocations: 29312518 (Pool: 29312323; Big: 195); GC: 15 Testing failed after 79.06s ERROR: LoadError: Package SciPyDiffEq errored during testing (received signal: 4) Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3247 [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] [7] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [8] include(mod::Module, _path::String) @ Base Base.jl:326 [9] exec_options(opts::Base.JLOptions) @ Base client.jl:355 [10] _start() @ Base client.jl:596 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval crashed after 188.86s: an unreachable instruction was executed ################################################################################ # Bug reporting # The package crashed during testing (reason=unreachable), but PkgEval was unable to reproduce the crash under rr (status=crash, reason=abort). For debugging, here is the tail end of the rr log: > [0dad84c5] ArgTools v1.1.2 > [56f22d72] Artifacts v1.11.0 > [2a0f44e3] Base64 v1.11.0 > [ade2ca70] Dates v1.11.0 > [8ba89e20] Distributed v1.11.0 > [f43a241f] Downloads v1.7.0 > [7b1f6079] FileWatching v1.11.0 > [9fa8497b] Future v1.11.0 > [b77e0a4c] InteractiveUtils v1.11.0 > [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 > [b27032c2] LibCURL v1.0.0 > [76f85450] LibGit2 v1.11.0 > [8f399da3] Libdl v1.11.0 > [37e2e46d] LinearAlgebra v1.14.0 > [56ddb016] Logging v1.11.0 > [d6f4376e] Markdown v1.11.0 > [ca575930] NetworkOptions v1.3.0 > [44cfe95a] Pkg v1.14.0 > [de0858da] Printf v1.11.0 > [9a3f8284] Random v1.11.0 > [ea8e919c] SHA v1.13.0 > [9e88b42a] Serialization v1.11.0 > [6462fe0b] Sockets v1.11.0 > [f489334b] StyledStrings v1.13.0 > [fa267f1f] TOML v1.0.3 > [a4e569a6] Tar v1.10.0 > [8dfed614] Test v1.11.0 > [cf7118a7] UUIDs v1.11.0 > [4ec0a83e] Unicode v1.11.0 > [e66e0078] CompilerSupportLibraries_jll v1.5.2+0 > [deac9b47] LibCURL_jll v8.20.0+1 > [e37daf67] LibGit2_jll v1.9.4+0 > [29816b5a] LibSSH2_jll v1.11.101+0 > [14a3606d] MozillaCACerts_jll v2026.5.14 > [4536629a] OpenBLAS_jll v0.3.33+0 > [458c3c95] OpenSSL_jll v3.5.6+0 > [efcefdf7] PCRE2_jll v10.47.0+0 > [83775a58] Zlib_jll v1.3.2+0 > [3161d3a3] Zstd_jll v1.5.7+1 > [8e850b90] libblastrampoline_jll v5.15.0+0 > [8e850ede] nghttp2_jll v1.69.0+0 > [3f19e933] p7zip_jll v17.8.0+0 > Testing Running tests... > Activating project at `~/.julia/environments/pkgeval` > Activating project at `/tmp/jl_YGp5RW` > Warning Some loaded packages differ from the active environment, which may affect reproducibility and trigger recompilation: > JSON: loaded v0.21.4, environment specifies v1.6.0 > Switching execution to under rr > [FATAL src/Task.cc:3848:spawn() errno: EPERM] PTRACE_SEIZE failed for tid 206; child probably died before reaching SIGSTOP > Child's message: > === Start rr backtrace: > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr[0x556001] > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr[0x695feb] > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr(_ZN2rr4Task5spawnERNS_7SessionERNS_8ScopedFdEPS3_S5_PiRKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKSt6vectorISC_SaISC_EESJ_i+0xbf0)[0x64f170] > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr(_ZN2rr13RecordSessionC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKSt6vectorIS6_SaIS6_EESD_RKNS_20DisableCPUIDFeaturesENS0_16SyscallBufferingEiNS_7BindCPUES8_PKNS_9TraceUuidEbbbb+0x317)[0x58b4b7] > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr(_ZN2rr13RecordSession6createERKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS7_EESB_RKNS_20DisableCPUIDFeaturesENS0_16SyscallBufferingEhNS_7BindCPUERKS7_PKNS_9TraceUuidEbbbbbb+0xc1e)[0x58c98e] > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr(_ZN2rr13RecordCommand3runERSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS7_EE+0x66f)[0x57eb7f] > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr(main+0x181)[0x4d5e61] > /lib/x86_64-linux-gnu/libc.so.6(+0x2724a)[0x7e439391124a] > /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85)[0x7e4393911305] > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr[0x4d8955] > === End rr backtrace > > Testing failed after 23.97s > > ERROR: LoadError: Package SciPyDiffEq errored during testing (received signal: 6) > Stacktrace: > [1] pkgerror(msg::String) > @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 > [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) > @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3247 > [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) > @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 > [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) > @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 > [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) > @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 > [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) > @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] > [7] top-level scope > @ /PkgEval.jl/scripts/evaluate.jl:221 > [8] include(mod::Module, _path::String) > @ Base Base.jl:326 > [9] exec_options(opts::Base.JLOptions) > @ Base client.jl:355 > [10] _start() > @ Base client.jl:596 > in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 > > PkgEval crashed after 145.82s: the process was aborted > > > ################################################################################ > # Bug reporting > # > > Finalizing trace... > > BugReporting completed after 29.77s > Uploaded rr trace to https://s3.amazonaws.com/julialang-reports/nanosoldier/pkgeval/rr/SciPyDiffEq-1780434744.tar.zst