Package evaluation to test MixedModels on Julia 1.14.0-DEV.2265 (73323c5146*) started at 2026-06-01T00:03:52.065 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 17.41s ################################################################################ # Installation # Installing MixedModels... Resolving package versions... Installed CommonWorldInvalidations ──── v1.0.0 Installed Indexing ──────────────────── v1.1.1 Installed DataStructures ────────────── v0.19.4 Installed CodecLz4 ──────────────────── v0.4.6 Installed DiffResults ───────────────── v1.1.0 Installed RegressionFormulae ────────── v0.1.4 Installed MacroTools ────────────────── v0.5.16 Installed ForwardDiff ───────────────── v1.3.3 Installed CodecZstd ─────────────────── v0.8.7 Installed GLM ───────────────────────── v1.9.5 Installed MixedModels ───────────────── v5.5.1 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed ArrowTypes ────────────────── v2.3.0 Installed Lz4_jll ───────────────────── v1.10.1+0 Installed StringViews ───────────────── v1.3.7 Installed FillArrays ────────────────── v1.16.0 Installed StatsModels ───────────────── v0.7.9 Installed InlineStrings ─────────────── v1.4.5 Installed HypergeometricFunctions ───── v0.3.28 Installed Adapt ─────────────────────── v4.6.0 Installed ConcurrentUtilities ───────── v2.5.1 Installed StatsBase ─────────────────── v0.34.11 Installed ExprTools ─────────────────── v0.1.10 Installed SplitApplyCombine ─────────── v1.3.0 Installed ShiftedArrays ─────────────── v2.0.0 Installed AliasTables ───────────────── v1.1.3 Installed TranscodingStreams ────────── v0.11.3 Installed TimeZones ─────────────────── v1.22.2 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed Combinatorics ─────────────── v1.1.0 Installed OrderedCollections ────────── v1.8.1 Installed DataAPI ───────────────────── v1.16.0 Installed Statistics ────────────────── v1.11.1 Installed Compat ────────────────────── v4.18.1 Installed MixedModelsDatasets ───────── v0.1.2 Installed PrecompileTools ───────────── v1.3.4 Installed DataValueInterfaces ───────── v1.0.0 Installed CEnum ─────────────────────── v0.5.0 Installed StatsAPI ──────────────────── v1.8.0 Installed CommonSubexpressions ──────── v0.3.1 Installed SentinelArrays ────────────── v1.4.10 Installed SciMLPublic ───────────────── v1.0.1 Installed ProgressMeter ─────────────── v1.11.0 Installed StaticArraysCore ──────────── v1.4.4 Installed NaNMath ───────────────────── v1.1.3 Installed IrrationalConstants ───────── v0.2.6 Installed FastGaussQuadrature ───────── v1.2.0 Installed StaticArrays ──────────────── v1.9.18 Installed QuadGK ────────────────────── v2.11.3 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed DiffRules ─────────────────── v1.16.0 Installed BitIntegers ───────────────── v0.3.7 Installed JSON3 ─────────────────────── v1.14.3 Installed ArrayLayouts ──────────────── v1.12.2 Installed LogExpFunctions ───────────── v0.3.29 Installed Parsers ───────────────────── v2.8.4 Installed Rmath ─────────────────────── v0.9.0 Installed TypedTables ───────────────── v1.4.6 Installed IfElse ────────────────────── v0.1.1 Installed Tables ────────────────────── v1.12.1 Installed StatsFuns ─────────────────── v1.5.2 Installed PtrArrays ─────────────────── v1.4.0 Installed Distributions ─────────────── v0.25.125 Installed Reexport ──────────────────── v1.2.2 Installed SpecialFunctions ──────────── v2.8.0 Installed Scratch ───────────────────── v1.3.0 Installed EnumX ─────────────────────── v1.0.7 Installed Missings ──────────────────── v1.2.0 Installed BandedMatrices ────────────── v1.11.0 Installed PooledArrays ──────────────── v1.4.3 Installed TableTraits ───────────────── v1.0.1 Installed Static ────────────────────── v1.4.0 Installed Preferences ───────────────── v1.5.2 Installed JLLWrappers ───────────────── v1.8.0 Installed StructTypes ───────────────── v1.11.0 Installed SortingAlgorithms ─────────── v1.2.2 Installed DocStringExtensions ───────── v0.9.5 Installed PDMats ────────────────────── v0.11.37 Installed NLopt ─────────────────────── v1.2.1 Installed Dictionaries ──────────────── v0.4.6 Installed TZJData ───────────────────── v1.5.0+2025b Installed Mocking ───────────────────── v0.8.1 Installed NLopt_jll ─────────────────── v2.10.0+0 Installed Arrow ─────────────────────── v2.8.1 Installed BSplineKit ────────────────── v0.19.2 Installing 5 artifacts Installed artifact OpenSpecFun 194.9 KiB Installed artifact Rmath 121.9 KiB Installed artifact Lz4 239.7 KiB Installed artifact NLopt 322.7 KiB Installed artifact tzjdata 112.5 KiB Updating `~/.julia/environments/v1.14/Project.toml` [ff71e718] + MixedModels v5.5.1 Updating `~/.julia/environments/v1.14/Manifest.toml` [79e6a3ab] + Adapt v4.6.0 [66dad0bd] + AliasTables v1.1.3 [4c555306] + ArrayLayouts v1.12.2 [69666777] + Arrow v2.8.1 [31f734f8] + ArrowTypes v2.3.0 [093aae92] + BSplineKit v0.19.2 [aae01518] + BandedMatrices v1.11.0 [c3b6d118] + BitIntegers v0.3.7 [fa961155] + CEnum v0.5.0 [5ba52731] + CodecLz4 v0.4.6 [6b39b394] + CodecZstd v0.8.7 [861a8166] + Combinatorics v1.1.0 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [f0e56b4a] + ConcurrentUtilities v2.5.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.4 [e2d170a0] + DataValueInterfaces v1.0.0 [85a47980] + Dictionaries v0.4.6 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.16.0 [31c24e10] + Distributions v0.25.125 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.7 [e2ba6199] + ExprTools v0.1.10 [442a2c76] + FastGaussQuadrature v1.2.0 [1a297f60] + FillArrays v1.16.0 [f6369f11] + ForwardDiff v1.3.3 [38e38edf] + GLM v1.9.5 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [313cdc1a] + Indexing v1.1.1 [842dd82b] + InlineStrings v1.4.5 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.8.0 [0f8b85d8] + JSON3 v1.14.3 ⌅ [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [ff71e718] + MixedModels v5.5.1 [7e9fb7ac] + MixedModelsDatasets v0.1.2 [78c3b35d] + Mocking v0.8.1 [76087f3c] + NLopt v1.2.1 [77ba4419] + NaNMath v1.1.3 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 [69de0a69] + Parsers v2.8.4 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.3 [189a3867] + Reexport v1.2.2 [545c379f] + RegressionFormulae v0.1.4 [79098fc4] + Rmath v0.9.0 [431bcebd] + SciMLPublic v1.0.1 [6c6a2e73] + Scratch v1.3.0 [91c51154] + SentinelArrays v1.4.10 [1277b4bf] + ShiftedArrays v2.0.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.8.0 [03a91e81] + SplitApplyCombine v1.3.0 [aedffcd0] + Static v1.4.0 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.11 ⌅ [4c63d2b9] + StatsFuns v1.5.2 [3eaba693] + StatsModels v0.7.9 [354b36f9] + StringViews v1.3.7 [856f2bd8] + StructTypes v1.11.0 [dc5dba14] + TZJData v1.5.0+2025b [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [f269a46b] + TimeZones v1.22.2 [3bb67fe8] + TranscodingStreams v0.11.3 [9d95f2ec] + TypedTables v1.4.6 [5ced341a] + Lz4_jll v1.10.1+0 [079eb43e] + NLopt_jll v2.10.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.2+0 [deac9b47] + LibCURL_jll v8.20.0+1 [e37daf67] + LibGit2_jll v1.9.3+0 [29816b5a] + LibSSH2_jll v1.11.101+0 [14a3606d] + MozillaCACerts_jll v2026.5.14 [4536629a] + OpenBLAS_jll v0.3.33+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.6+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.69.0+0 [3f19e933] + p7zip_jll v17.8.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 11.41s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling project... 5.1 s ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. Precompiling package dependencies... Precompiling project... 4.0 s ✓ MacroTools 1.5 s ✓ InlineStrings 0.5 s ✓ Reexport 0.9 s ✓ ConstructionBase 2.0 s ✓ IrrationalConstants 0.5 s ✓ DataValueInterfaces 0.6 s ✓ StatsAPI 0.6 s ✓ CEnum 0.5 s ✓ Indexing 1.8 s ✓ Combinatorics 0.9 s ✓ StringViews 1.1 s ✓ TranscodingStreams 0.6 s ✓ LaTeXStrings 1.0 s ✓ Statistics 0.8 s ✓ StaticArraysCore 0.7 s ✓ StableRNGs 0.5 s ✓ IfElse 0.5 s ✓ PtrArrays 1.1 s ✓ BitIntegers 0.7 s ✓ Adapt 0.6 s ✓ DataAPI 0.6 s ✓ SciMLPublic 0.5 s ✓ CommonWorldInvalidations 0.6 s ✓ InvertedIndices 0.6 s ✓ InverseFunctions 0.6 s ✓ ShiftedArrays 0.6 s ✓ EnumX 0.6 s ✓ TZJData 2.4 s ✓ FillArrays 0.6 s ✓ ExprTools 1.2 s ✓ OrderedCollections 0.8 s ✓ DocStringExtensions 0.5 s ✓ IteratorInterfaceExtensions 1.8 s ✓ Crayons 0.6 s ✓ Suppressor 0.8 s ✓ NaNMath 1.1 s ✓ Requires 0.7 s ✓ ArrowTypes 1.3 s ✓ ConcurrentUtilities 2.5 s ✓ ProgressMeter 1.1 s ✓ Scratch 2.2 s ✓ SentinelArrays 2.0 s ✓ StructTypes 2.7 s ✓ PDMats 1.0 s ✓ Compat 1.4 s ✓ Preferences 1.8 s ✓ CommonSubexpressions 0.5 s ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 2.2 s ✓ Dictionaries 1.8 s ✓ CodecZstd 2.0 s ✓ Statistics → SparseArraysExt 0.6 s ✓ DiffResults 0.7 s ✓ AliasTables 0.9 s ✓ ArrayInterface 2.0 s ✓ Adapt → AdaptSparseArraysExt 0.8 s ✓ Missings 0.8 s ✓ PooledArrays 1.1 s ✓ InverseFunctions → InverseFunctionsDatesExt 1.7 s ✓ InverseFunctions → InverseFunctionsTestExt 2.5 s ✓ FillArrays → FillArraysSparseArraysExt 0.9 s ✓ FillArrays → FillArraysStatisticsExt 3.9 s ✓ DataStructures 1.2 s ✓ LogExpFunctions 0.5 s ✓ TableTraits 2.4 s ✓ TypeUtils 0.6 s ✓ InlineStrings → ArrowTypesExt 2.4 s ✓ FillArrays → FillArraysPDMatsExt 0.6 s ✓ Compat → CompatLinearAlgebraExt 1.6 s ✓ PrecompileTools 2.1 s ✓ JLLWrappers 2.8 s ✓ Setfield 1.3 s ✓ SplitApplyCombine 0.5 s ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 1.9 s ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 1.0 s ✓ SortingAlgorithms 1.9 s ✓ QuadGK 0.5 s ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 1.6 s ✓ Tables 6.4 s ✓ Aqua 0.8 s ✓ Mocking 2.8 s ✓ CategoricalArrays 3.6 s ✓ StringManipulation 14.9 s ✓ StaticArrays 16.3 s ✓ Parsers 57.0 s ✓ ExplicitImports 6.8 s ✓ Static 2.4 s ✓ Lz4_jll 2.3 s ✓ NLopt_jll 2.3 s ✓ Rmath_jll 2.3 s ✓ OpenSpecFun_jll 2.2 s ✓ PRIMA_jll 1.2 s ✓ FiniteDiff 6.0 s ✓ StatsBase 1.9 s ✓ TypedTables 7.1 s ✓ TimeZones 1.3 s ✓ CategoricalArrays → CategoricalArraysSentinelArraysExt 1.2 s ✓ CategoricalArrays → CategoricalArraysStructTypesExt 46.7 s ✓ PrettyTables 1.8 s ✓ StaticArrays → StaticArraysStatisticsExt 1.9 s ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1.9 s ✓ Adapt → AdaptStaticArraysExt 2.5 s ✓ FillArrays → FillArraysStaticArraysExt 14.9 s ✓ JSON3 1.1 s ✓ InlineStrings → ParsersExt 2.2 s ✓ CodecLz4 2.4 s ✓ NLopt 1.7 s ✓ Rmath 5.4 s ✓ SpecialFunctions 1.8 s ✓ PRIMA 1.8 s ✓ FiniteDiff → FiniteDiffStaticArraysExt 2.0 s ✓ FiniteDiff → FiniteDiffSparseArraysExt 2.2 s ✓ PDMats → StatsBaseExt 2.4 s ✓ CategoricalArrays → CategoricalArraysStatsBaseExt 95.5 s ✓ DataFrames 29.4 s ✓ ArrayLayouts 1.3 s ✓ JSON3 → JSON3ArrowExt 15.5 s ✓ Arrow 5.9 s ✓ FastGaussQuadrature 2.7 s ✓ HypergeometricFunctions 1.2 s ✓ DiffRules 31.8 s ✓ BandedMatrices 6.6 s ✓ ArrayLayouts → ArrayLayoutsSparseArraysExt 9.4 s ✓ MixedModelsDatasets 5.7 s ✓ CategoricalArrays → CategoricalArraysArrowExt 3.3 s ✓ StatsFuns 8.0 s ✓ ForwardDiff 8.6 s ✓ BandedMatrices → BandedMatricesSparseArraysExt 6.8 s ✓ ArrayInterface → ArrayInterfaceBandedMatricesExt 6.9 s ✓ FiniteDiff → FiniteDiffBandedMatricesExt 1.0 s ✓ StatsFuns → StatsFunsInverseFunctionsExt 6.9 s ✓ StatsModels 12.2 s ✓ Distributions 2.5 s ✓ ForwardDiff → ForwardDiffStaticArraysExt 5.1 s ✓ RegressionFormulae 7.8 s ✓ GLM 5.3 s ✓ Distributions → DistributionsTestExt 30.4 s ✓ BSplineKit  Downloading artifact: TestData 177.3 s ✓ MixedModels 35.8 s ✓ MixedModels → MixedModelsPRIMAExt 38.1 s ✓ MixedModels → MixedModelsFiniteDiffExt 40.1 s ✓ MixedModels → MixedModelsForwardDiffExt 141 dependencies successfully precompiled in 930 seconds. 40 already precompiled. 1 dependency had output during precompilation: ┌ MixedModels │ Downloading artifact: TestData └ Precompilation completed after 966.81s ################################################################################ # Testing # Testing MixedModels Status `/tmp/jl_oGU5P7/Project.toml` [4c88cf16] Aqua v0.8.14 [69666777] Arrow v2.8.1 [093aae92] BSplineKit v0.19.2 [324d7699] CategoricalArrays v1.1.1 [34da2185] Compat v4.18.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.2 [31c24e10] Distributions v0.25.125 [7d51a73a] ExplicitImports v1.15.0 [6a86dc24] FiniteDiff v2.31.0 [f6369f11] ForwardDiff v1.3.3 [38e38edf] GLM v1.9.5 [0f8b85d8] JSON3 v1.14.3 [ff71e718] MixedModels v5.5.1 [7e9fb7ac] MixedModelsDatasets v0.1.2 [76087f3c] NLopt v1.2.1 [0a7d04aa] PRIMA v0.2.4 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.4 [92933f4c] ProgressMeter v1.11.0 [545c379f] RegressionFormulae v0.1.4 [860ef19b] StableRNGs v1.0.4 [90137ffa] StaticArrays v1.9.18 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.11 ⌅ [4c63d2b9] StatsFuns v1.5.2 [3eaba693] StatsModels v0.7.9 [856f2bd8] StructTypes v1.11.0 [fd094767] Suppressor v0.2.8 [bd369af6] Tables v1.12.1 [9d95f2ec] TypedTables v1.4.6 [b77e0a4c] InteractiveUtils v1.11.0 [37e2e46d] LinearAlgebra v1.14.0 [d6f4376e] Markdown v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_oGU5P7/Manifest.toml` [79e6a3ab] Adapt v4.6.0 [66dad0bd] AliasTables v1.1.3 [4c88cf16] Aqua v0.8.14 [4fba245c] ArrayInterface v7.25.0 [4c555306] ArrayLayouts v1.12.2 [69666777] Arrow v2.8.1 [31f734f8] ArrowTypes v2.3.0 [093aae92] BSplineKit v0.19.2 [aae01518] BandedMatrices v1.11.0 [c3b6d118] BitIntegers v0.3.7 [fa961155] CEnum v0.5.0 [324d7699] CategoricalArrays v1.1.1 [5ba52731] CodecLz4 v0.4.6 [6b39b394] CodecZstd v0.8.7 [861a8166] Combinatorics v1.1.0 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [f0e56b4a] ConcurrentUtilities v2.5.1 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.2 [864edb3b] DataStructures v0.19.4 [e2d170a0] DataValueInterfaces v1.0.0 [85a47980] Dictionaries v0.4.6 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.16.0 [31c24e10] Distributions v0.25.125 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.7 [7d51a73a] ExplicitImports v1.15.0 [e2ba6199] ExprTools v0.1.10 [442a2c76] FastGaussQuadrature v1.2.0 [1a297f60] FillArrays v1.16.0 [6a86dc24] FiniteDiff v2.31.0 [f6369f11] ForwardDiff v1.3.3 [38e38edf] GLM v1.9.5 [34004b35] HypergeometricFunctions v0.3.28 [615f187c] IfElse v0.1.1 [313cdc1a] Indexing v1.1.1 [842dd82b] InlineStrings v1.4.5 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.8.0 [0f8b85d8] JSON3 v1.14.3 [b964fa9f] LaTeXStrings v1.4.0 ⌅ [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [ff71e718] MixedModels v5.5.1 [7e9fb7ac] MixedModelsDatasets v0.1.2 [78c3b35d] Mocking v0.8.1 [76087f3c] NLopt v1.2.1 [77ba4419] NaNMath v1.1.3 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.37 [0a7d04aa] PRIMA v0.2.4 [69de0a69] Parsers v2.8.4 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [08abe8d2] PrettyTables v3.3.2 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.4.0 [1fd47b50] QuadGK v2.11.3 [189a3867] Reexport v1.2.2 [545c379f] RegressionFormulae v0.1.4 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [431bcebd] SciMLPublic v1.0.1 [6c6a2e73] Scratch v1.3.0 [91c51154] SentinelArrays v1.4.10 [efcf1570] Setfield v1.1.2 [1277b4bf] ShiftedArrays v2.0.0 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.8.0 [03a91e81] SplitApplyCombine v1.3.0 [860ef19b] StableRNGs v1.0.4 [aedffcd0] Static v1.4.0 [90137ffa] StaticArrays v1.9.18 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.11 ⌅ [4c63d2b9] StatsFuns v1.5.2 [3eaba693] StatsModels v0.7.9 [892a3eda] StringManipulation v0.4.4 [354b36f9] StringViews v1.3.7 [856f2bd8] StructTypes v1.11.0 [fd094767] Suppressor v0.2.8 [dc5dba14] TZJData v1.5.0+2025b [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [f269a46b] TimeZones v1.22.2 [3bb67fe8] TranscodingStreams v0.11.3 [c3b1956e] TypeUtils v1.14.0 [9d95f2ec] TypedTables v1.4.6 [5ced341a] Lz4_jll v1.10.1+0 [079eb43e] NLopt_jll v2.10.0+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [eead6e0c] PRIMA_jll v0.7.1+0 [f50d1b31] Rmath_jll v0.5.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.14.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.13.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.5.2+0 [deac9b47] LibCURL_jll v8.20.0+1 [e37daf67] LibGit2_jll v1.9.3+0 [29816b5a] LibSSH2_jll v1.11.101+0 [14a3606d] MozillaCACerts_jll v2026.5.14 [4536629a] OpenBLAS_jll v0.3.33+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.6+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.69.0+0 [3f19e933] p7zip_jll v17.8.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ┌ Info: Julia Version 1.14.0-DEV.2265 │ Build Info: │ Commit 73323c5146* (2026-05-30 16:44 UTC) │ GC: Built with stock GC │ Platform Info: │ OS: Linux (x86_64-unknown-linux-gnu) │ CPU: 128 × AMD EPYC 7502 32-Core Processor (znver2) │ WORD_SIZE: 64 │ LLVM: libLLVM-21.1.8 (ORCJIT, znver2) │ Threads: 1 default, 0 interactive, 1 GC (on 1 virtual cores) │ Environment: │ JULIA_CPU_THREADS = 1 │ JULIA_NUM_PRECOMPILE_TASKS = 1 │ JULIA_PKG_PRECOMPILE_AUTO = 0 │ JULIA_PKGEVAL = true │ JULIA_DEPOT_PATH = /home/pkgeval/.julia:/usr/local/share/julia: │ JULIA_NUM_THREADS = 1 └ JULIA_LOAD_PATH = @:/tmp/jl_oGU5P7 [ Info: LBTConfig([ILP64] libopenblas64_.so) Test Summary: | Pass Total Time Aqua | 9 9 3m11.2s Test Summary: | Pass Total Time ExplicitImports | 2 2 1m19.7s Test Summary: | Pass Total Time average | 1 1 0.1s Test Summary: | Pass Total Time densify | 3 3 2.6s Test Summary: | Pass Total Time isconstant | 13 13 3.8s Test Summary: | Pass Total Time PCA | 3 3 58.7s Test Summary: | Pass Total Time formula | 2 2 41.1s Test Summary: | Pass Total Time formula misspecification | 8 8 23.3s Test Summary: | Pass Total Time non-unicode function aliases for exports | 2 2 0.0s Test Summary: | Pass Total Time fullranknumeric | 1 1 1.5s Test Summary: | Pass Total Time fullrankcategorical | 2 2 6.0s Test Summary: | Pass Total Time dependentcolumn | 4 4 1.3s Test Summary: | Pass Total Time qr missing cells | 2 2 0.1s Test Summary: | Pass Total Time zero columns in X | 2 2 0.1s Test Summary: | Pass Total Time UBlk | 24 24 24.7s Test Summary: | Pass Total Time mul! | 36 36 2.3s ┌ Warning: `wts` keyword argument is deprecated, use `weights` instead │ caller = fit(::Type{LinearMixedModel}, f::FormulaTerm{Term, Tuple{ConstantTerm{Int64}, Term, FunctionTerm{typeof(|), Vector{AbstractTerm}}, FunctionTerm{typeof(|), Vector{AbstractTerm}}}}, tbl::@NamedTuple{Y::Vector{Float64}, A::PooledVector{String, UInt32, Vector{UInt32}}, G::PooledVector{String, UInt32, Vector{UInt32}}, H::PooledVector{String, UInt32, Vector{UInt32}}}; weights::Vector{Any}, wts::Vector{Float64}, contrasts::Dict{Symbol, Any}, σ::Nothing, amalgamate::Bool, kwargs::Base.Pairs{Symbol, Bool, Nothing, @NamedTuple{progress::Bool}}) at linearmixedmodel.jl:229 └ @ MixedModels ~/.julia/packages/MixedModels/iYVCb/src/linearmixedmodel.jl:229 Test Summary: | Pass Total Time reweight! | 2 2 14.0s Test Summary: | Pass Total Time rankupdate! | 2 2 4.6s Test Summary: | Pass Total Time lmulλ! | 1 1 12.7s Test Summary: | Pass Total Time Xymat | 15 15 2.1s Test Summary: | Pass Broken Total Time XymatSparse | 12 1 13 1m05.1s Test Summary: | Pass Total Time scalarReMat | 39 39 24.9s Test Summary: | Pass Total Time RandomEffectsTerm | 18 18 25.6s Test Summary: | Pass Total Time random effects term syntax | 24 24 38.3s Test Summary: | Pass Total Time Grouping | 1 1 0.9s Test Summary: | Pass Total Time Grouping pseudo-contrasts | 10 10 15.5s Test Summary: | Pass Broken Total Time Auto application of Grouping() | 36 3 39 19.6s Test Summary: | Pass Total Time LMM from MixedModel | 3 3 9.7s Test Summary: | Pass Total Time offset | 2 2 1.9s Test Summary: | Pass Total Time Dyestuff | 83 83 1m10.6s ┌ Warning: NLopt was roundoff limited └ @ MixedModels.MixedModelsNLoptExt ~/.julia/packages/MixedModels/iYVCb/src/MixedModelsNLoptExt.jl:132 ┌ Warning: NLopt was roundoff limited └ @ MixedModels.MixedModelsNLoptExt ~/.julia/packages/MixedModels/iYVCb/src/MixedModelsNLoptExt.jl:132 ┌ Warning: NLopt was roundoff limited └ @ MixedModels.MixedModelsNLoptExt ~/.julia/packages/MixedModels/iYVCb/src/MixedModelsNLoptExt.jl:132 ┌ Warning: NLopt was roundoff limited └ @ MixedModels.MixedModelsNLoptExt ~/.julia/packages/MixedModels/iYVCb/src/MixedModelsNLoptExt.jl:132 ┌ Warning: NLopt was roundoff limited └ @ MixedModels.MixedModelsNLoptExt ~/.julia/packages/MixedModels/iYVCb/src/MixedModelsNLoptExt.jl:132 ┌ Warning: NLopt was roundoff limited └ @ MixedModels.MixedModelsNLoptExt ~/.julia/packages/MixedModels/iYVCb/src/MixedModelsNLoptExt.jl:132 Test Summary: | Pass Total Time Dyestuff2 | 11 11 6.8s Test Summary: | Pass Total Time penicillin | 26 26 6.5s Test Summary: | Pass Total Time pastes | 22 22 8.5s Test Summary: | Pass Total Time InstEval | 23 23 5.6s ┌ Warning: optsum was saved with an older version of MixedModels.jl: consider resaving. └ @ MixedModels ~/.julia/packages/MixedModels/iYVCb/src/serialization.jl:124 ┌ Warning: optsum was saved with an older version of MixedModels.jl: consider resaving. └ @ MixedModels ~/.julia/packages/MixedModels/iYVCb/src/serialization.jl:124 ┌ Warning: optsum was saved with an older version of MixedModels.jl: consider resaving. └ @ MixedModels ~/.julia/packages/MixedModels/iYVCb/src/serialization.jl:124 ┌ Warning: optsum was saved with an older version of MixedModels.jl: consider resaving. └ @ MixedModels ~/.julia/packages/MixedModels/iYVCb/src/serialization.jl:124 Test Summary: | Pass Total Time sleep | 135 135 1m29.3s Test Summary: | Pass Total Time d3 | 6 6 25.1s Test Summary: | Pass Total Time kb07 | 6 6 23.8s Test Summary: | Pass Total Time oxide | 1 1 13.3s Test Summary: | Pass Total Time Rank deficient | 7 7 5.8s Test Summary: | Pass Total Time coeftable | 1 1 0.0s ┌ Warning: `wts` keyword argument is deprecated, use `weights` instead │ caller = fit(::Type{LinearMixedModel}, f::FormulaTerm{Term, Tuple{ConstantTerm{Int64}, Term, FunctionTerm{typeof(|), Vector{AbstractTerm}}}}, tbl::@NamedTuple{a::Vector{Float64}, b::Vector{Float64}, c::PooledVector{String, UInt32, Vector{UInt32}}, w1::Vector{Int64}, w2::Vector{Float64}}; weights::Vector{Any}, wts::Vector{Int64}, contrasts::Dict{Symbol, Any}, σ::Nothing, amalgamate::Bool, kwargs::Base.Pairs{Symbol, Bool, Nothing, @NamedTuple{progress::Bool}}) at linearmixedmodel.jl:229 └ @ MixedModels ~/.julia/packages/MixedModels/iYVCb/src/linearmixedmodel.jl:229 Test Summary: | Pass Total Time wts | 3 3 3.7s Test Summary: | Pass Total Time unifying ReMat eltypes | 3 3 4.3s Test Summary: | Pass Total Time recovery from misscaling | 2 2 11.5s Test Summary: | Pass Total Time methods we don't define | 4 4 1.0s Test Summary: | Pass Total Time GLMM from MixedModel | 2 2 13.6s Test Summary: | Pass Total Time Type for instance | 9 9 0.2s Test Summary: | Pass Total Time contra | 41 41 25.1s ┌ Warning: `wts` keyword argument is deprecated, use `weights` instead │ caller = fit(::Type{GeneralizedLinearMixedModel}, f::FormulaTerm{FunctionTerm{typeof(/), Vector{Term}}, Tuple{ConstantTerm{Int64}, Term, FunctionTerm{typeof(|), Vector{AbstractTerm}}}}, tbl::@NamedTuple{herd::Arrow.DictEncoded{String, Int8, Arrow.List{String, Int32, Vector{UInt8}}}, period::Arrow.DictEncoded{String, Int8, Arrow.List{String, Int32, Vector{UInt8}}}, incid::Arrow.Primitive{Int8, Vector{Int8}}, hsz::Arrow.Primitive{Int8, Vector{Int8}}}, d::Binomial{Float64}, l::LogitLink; weights::Vector{Any}, wts::Vector{Float64}, contrasts::Dict{Symbol, Any}, offset::Vector{Any}, amalgamate::Bool, kwargs::Base.Pairs{Symbol, Any, Nothing, @NamedTuple{progress::Bool, init_from_lmm::Vector{Symbol}}}) at generalizedlinearmixedmodel.jl:187 └ @ MixedModels ~/.julia/packages/MixedModels/iYVCb/src/generalizedlinearmixedmodel.jl:187 ┌ Warning: `wts` keyword argument is deprecated, use `weights` instead │ caller = GeneralizedLinearMixedModel(f::FormulaTerm{FunctionTerm{typeof(/), Vector{Term}}, Tuple{ConstantTerm{Int64}, Term, FunctionTerm{typeof(|), Vector{AbstractTerm}}}}, tbl::DataFrame, d::Binomial{Float64}, l::LogitLink; kwargs::Base.Pairs{Symbol, Vector{Float64}, Nothing, @NamedTuple{wts::Vector{Float64}}}) at generalizedlinearmixedmodel.jl:352 └ @ MixedModels ~/.julia/packages/MixedModels/iYVCb/src/generalizedlinearmixedmodel.jl:352 Test Summary: | Pass Total Time cbpp | 19 19 25.6s Test Summary: | Pass Total Time verbagg | 4 4 21.3s Test Summary: | Pass Total Time grouseticks | 8 8 3m29.3s Test Summary: | Pass Total Time dispersion | 3 3 16.1s Test Summary: | Pass Total Time mmec | 4 4 4.7s ┌ Warning: `wts` keyword argument is deprecated, use `weights` instead │ caller = GeneralizedLinearMixedModel(f::FormulaTerm{FunctionTerm{typeof(/), Vector{Term}}, Tuple{ConstantTerm{Int64}, Term, FunctionTerm{typeof(|), Vector{AbstractTerm}}}}, tbl::Arrow.Table, d::Binomial{Float64}, l::LogitLink; kwargs::Base.Pairs{Symbol, Arrow.Primitive{Int8, Vector{Int8}}, Nothing, @NamedTuple{wts::Arrow.Primitive{Int8, Vector{Int8}}}}) at generalizedlinearmixedmodel.jl:352 └ @ MixedModels ~/.julia/packages/MixedModels/iYVCb/src/generalizedlinearmixedmodel.jl:352 Test Summary: | Pass Total Time GLMM saveoptsum | 6 6 3.7s Test Summary: | Pass Total Time Bad initial value | 2 2 16.8s Test Summary: | Pass Total Time GHnorm | 5 5 0.5s Test Summary: | Pass Total Time linear, and lmm wrapper | 8 8 1.0s Test Summary: | Pass Total Time generalized | 1 1 16.5s Test Summary: | Pass Total Time Normal-IdentityLink | 2 2 0.1s Test Summary: | Pass Total Time Normal Distribution GLMM | 1 1 3.0s Test Summary: | Pass Total Time Missing Omit | 2 2 4.4s ┌ Error: Random effects are not nested. └ @ MixedModels ~/.julia/packages/MixedModels/iYVCb/src/likelihoodratiotest.jl:253 ┌ Error: Fixed effects are not nested. └ @ MixedModels ~/.julia/packages/MixedModels/iYVCb/src/likelihoodratiotest.jl:231 ┌ Error: Inner models have grouping variables not present in outer models. └ @ MixedModels ~/.julia/packages/MixedModels/iYVCb/src/likelihoodratiotest.jl:240 Test Summary: | Pass Total Time isnested | 10 10 13.1s Test Summary: | Pass Total Time likelihoodratio test | 22 22 32.4s ┌ Warning: `wts` keyword argument is deprecated, use `weights` instead │ caller = fit(::Type{GeneralizedLinearMixedModel}, f::FormulaTerm{FunctionTerm{typeof(/), Vector{Term}}, Tuple{ConstantTerm{Int64}, Term, FunctionTerm{typeof(|), Vector{AbstractTerm}}}}, tbl::@NamedTuple{herd::Arrow.DictEncoded{String, Int8, Arrow.List{String, Int32, Vector{UInt8}}}, period::Arrow.DictEncoded{String, Int8, Arrow.List{String, Int32, Vector{UInt8}}}, incid::Arrow.Primitive{Int8, Vector{Int8}}, hsz::Arrow.Primitive{Int8, Vector{Int8}}}, d::Binomial{Float64}, l::LogitLink; weights::Vector{Any}, wts::Vector{Float64}, contrasts::Dict{Symbol, Any}, offset::Vector{Any}, amalgamate::Bool, kwargs::Base.Pairs{Symbol, Bool, Nothing, @NamedTuple{progress::Bool}}) at generalizedlinearmixedmodel.jl:187 └ @ MixedModels ~/.julia/packages/MixedModels/iYVCb/src/generalizedlinearmixedmodel.jl:187 Test Summary: | Pass Total Time simulate!(::MixedModel) | 9 9 23.3s ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 562 running 1 of 1 signal (10): User defined signal 1 lookup_type_set at /source/src/jltypes.c:1092:12 [inlined] lookup_type at /source/src/jltypes.c:1172:29 inst_datatype_inner at /source/src/jltypes.c:2186:28 jl_apply_tuple_type_v_ at /source/src/jltypes.c:2507:12 [inlined] ijl_apply_tuple_type_v at /source/src/jltypes.c:2517:12 _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 jl_apply at /source/src/julia.h:2370:12 [inlined] jl_f__apply_iterate at /source/src/builtins.c:897:26 argtypes_to_type at ./../usr/share/julia/Compiler/src/typeutils.jl:55:0 (pc: 24) handle_call! at ./../usr/share/julia/Compiler/src/ssair/inlining.jl:1368:0 (pc: 30) [inlined] assemble_inline_todo! at ./../usr/share/julia/Compiler/src/ssair/inlining.jl:1612:0 (pc: 105) ssa_inlining_pass! at ./../usr/share/julia/Compiler/src/ssair/inlining.jl:76:0 (pc: 4) [inlined] run_passes_ipo_safe at ./../usr/share/julia/Compiler/src/optimize.jl:1037:0 (pc: 77) run_passes_ipo_safe at ./../usr/share/julia/Compiler/src/optimize.jl:1050:0 (pc: 2) [inlined] optimize at ./../usr/share/julia/Compiler/src/optimize.jl:1023:0 (pc: 3) [inlined] finish_nocycle at ./../usr/share/julia/Compiler/src/typeinfer.jl:278:0 (pc: 25) jfptr_finish_nocycle_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 typeinf at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4872:0 (pc: 164) typeinf_ext at ./../usr/share/julia/Compiler/src/typeinfer.jl:1537:0 (pc: 123) typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1722:0 (pc: 2) [inlined] typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1731:0 (pc: 17) jfptr_typeinf_ext_toplevel_2.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 jl_apply at /source/src/julia.h:2370:12 [inlined] jl_type_infer at /source/src/gf.c:463:35 jl_compile_method_internal at /source/src/gf.c:3655:24 _jl_invoke at /source/src/gf.c:4120:16 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 collect_to! at ./array.jl:921:0 (pc: 36) collect_to_with_first! at ./array.jl:869:0 (pc: 9) unknown function (ip: 0x716d953801a9) at (unknown file) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 collect at ./array.jl:843:0 (pc: 83) _totuple at ./tuple.jl:490:0 (pc: 6) [inlined] Tuple at ./tuple.jl:454:0 (pc: 3) [inlined] #arrowvector#40 at /home/pkgeval/.julia/packages/Arrow/4zFuR/src/arraytypes/struct.jl:105:0 (pc: 26) arrowvector at /home/pkgeval/.julia/packages/Arrow/4zFuR/src/arraytypes/struct.jl:101:0 (pc: 3) [inlined] #arrowvector#7 at /home/pkgeval/.julia/packages/Arrow/4zFuR/src/arraytypes/arraytypes.jl:150:0 (pc: 19) unknown function (ip: 0x716d9537dfab) at (unknown file) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_invoke at /source/src/gf.c:4135:12 arrowvector at /home/pkgeval/.julia/packages/Arrow/4zFuR/src/arraytypes/arraytypes.jl:148:0 (pc: 3) unknown function (ip: 0x716d9537defb) at (unknown file) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_invoke at /source/src/gf.c:4135:12 #arrowvector#3 at /home/pkgeval/.julia/packages/Arrow/4zFuR/src/arraytypes/arraytypes.jl:113:0 (pc: 103) unknown function (ip: 0x716d9537d927) at (unknown file) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_invoke at /source/src/gf.c:4135:12 arrowvector at /home/pkgeval/.julia/packages/Arrow/4zFuR/src/arraytypes/arraytypes.jl:68:0 (pc: 52) [inlined] #toarrowvector#2 at /home/pkgeval/.julia/packages/Arrow/4zFuR/src/arraytypes/arraytypes.jl:47:0 (pc: 176) toarrowvector at /home/pkgeval/.julia/packages/Arrow/4zFuR/src/arraytypes/arraytypes.jl:36:0 (pc: 32) [inlined] #toarrowtable##0 at /home/pkgeval/.julia/packages/Arrow/4zFuR/src/write.jl:532:0 (pc: 28) [inlined] eachcolumn at /home/pkgeval/.julia/packages/Tables/cRTb7/src/utils.jl:70:0 (pc: 48) [inlined] toarrowtable at /home/pkgeval/.julia/packages/Arrow/4zFuR/src/write.jl:529:0 (pc: 104) unknown function (ip: 0x716d95374438) at (unknown file) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 macro expansion at /home/pkgeval/.julia/packages/Arrow/4zFuR/src/write.jl:264:0 (pc: 52) [inlined] macro expansion at ./task.jl:662:0 (pc: 54) [inlined] write at /home/pkgeval/.julia/packages/Arrow/4zFuR/src/write.jl:254:0 (pc: 198) #146 at /home/pkgeval/.julia/packages/Arrow/4zFuR/src/write.jl:407:0 (pc: 3) unknown function (ip: 0x716d95369622) at (unknown file) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 #open#333 at ./io.jl:438:0 (pc: 16) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 open at ./io.jl:435:0 (pc: 4) #write#144 at /home/pkgeval/.julia/packages/Arrow/4zFuR/src/write.jl:406:0 (pc: 14) [inlined] write at /home/pkgeval/.julia/packages/Arrow/4zFuR/src/write.jl:405:0 (pc: 4) [inlined] savereplicates at /home/pkgeval/.julia/packages/MixedModels/iYVCb/src/bootstrap.jl:132:0 (pc: 4) unknown function (ip: 0x716d95361569) at (unknown file) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 macro expansion at /home/pkgeval/.julia/packages/MixedModels/iYVCb/test/bootstrap.jl:171:0 (pc: 86) [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.14/Test/src/Test.jl:2246:0 (pc: 118) [inlined] macro expansion at /home/pkgeval/.julia/packages/MixedModels/iYVCb/test/bootstrap.jl:166:0 (pc: 305) [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.14/Test/src/Test.jl:2246:0 (pc: 320) [inlined] top-level scope at /home/pkgeval/.julia/packages/MixedModels/iYVCb/test/bootstrap.jl:91:0 (pc: 2289) jl_invoke_oneshot at /source/src/gf.c:4163:23 ijl_eval_thunk at /source/src/toplevel.c:760:18 jl_toplevel_eval_flex at /source/src/toplevel.c:712:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:602:15 jl_toplevel_eval_flex at /source/src/toplevel.c:684:27 ijl_toplevel_eval at /source/src/toplevel.c:782:12 ijl_toplevel_eval_in at /source/src/toplevel.c:827:13 eval at ./boot.jl:517:0 (pc: 3) include_string at ./loading.jl:3132:0 (pc: 125) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 _include at ./loading.jl:3192:0 (pc: 35) include at ./Base.jl:327:0 (pc: 3) IncludeInto at ./Base.jl:328:0 (pc: 4) jfptr_IncludeInto_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 jl_apply at /source/src/julia.h:2370:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:243:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:706:13 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897:21 ijl_eval_thunk at /source/src/toplevel.c:768:18 jl_toplevel_eval_flex at /source/src/toplevel.c:712:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:602:15 jl_toplevel_eval_flex at /source/src/toplevel.c:684:27 ijl_toplevel_eval at /source/src/toplevel.c:782:12 ijl_toplevel_eval_in at /source/src/toplevel.c:827:13 eval at ./boot.jl:517:0 (pc: 3) include_string at ./loading.jl:3132:0 (pc: 125) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 _include at ./loading.jl:3192:0 (pc: 35) include at ./Base.jl:327:0 (pc: 3) IncludeInto at ./Base.jl:328:0 (pc: 4) jfptr_IncludeInto_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 jl_apply at /source/src/julia.h:2370:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:243:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:706:13 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897:21 ijl_eval_thunk at /source/src/toplevel.c:768:18 jl_toplevel_eval_flex at /source/src/toplevel.c:712:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:602:15 jl_toplevel_eval_flex at /source/src/toplevel.c:684:27 ijl_toplevel_eval at /source/src/toplevel.c:782:12 ijl_toplevel_eval_in at /source/src/toplevel.c:827:13 eval at ./boot.jl:517:0 (pc: 3) exec_options at ./client.jl:321:0 (pc: 353) _start at ./client.jl:596:0 (pc: 35) jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 jl_apply at /source/src/julia.h:2370:12 [inlined] true_main at /source/src/jlapi.c:971:29 jl_repl_entrypoint at /source/src/jlapi.c:1138:15 main at /source/cli/loader_exe.c:58:15 unknown function (ip: 0x716dee354249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0 ijl_task_get_next at /source/src/scheduler.c:457:34 wait at ./task.jl:1246:0 (pc: 44) wait_forever at ./task.jl:1168:0 (pc: 5) jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 jl_apply at /source/src/julia.h:2370:12 [inlined] start_task at /source/src/task.c:1275:19 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x0000735f08fa3c10 Total snapshots: 379. Utilization: 0% ╎379 @Base/task.jl:1168 wait_forever() 378╎ 379 @Base/task.jl:1246 wait() [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0 ijl_task_get_next at /source/src/scheduler.c:457:34 wait at ./task.jl:1246:0 (pc: 44) wait_forever at ./task.jl:1168:0 (pc: 5) jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 jl_apply at /source/src/julia.h:2370:12 [inlined] start_task at /source/src/task.c:1275:19 unknown function (ip: (nil)) at (unknown file) Allocations: 22577693 (Pool: 22576805; Big: 888); GC: 25 [562] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/MixedModels/iYVCb/test/bootstrap.jl:90 _ZN4llvm15ScalarEvolution21getOrCreateAddRecExprENS_8ArrayRefIPKNS_4SCEVEEEPKNS_4LoopENS2_11NoWrapFlagsE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm15ScalarEvolution13getAddRecExprEPKNS_4SCEVES3_PKNS_4LoopENS1_11NoWrapFlagsE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm15ScalarEvolution19createAddRecFromPHIEPNS_7PHINodeE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm15ScalarEvolution16createNodeForPHIEPNS_7PHINodeE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm15ScalarEvolution14createSCEVIterEPNS_5ValueE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm15ScalarEvolution14createSCEVIterEPNS_5ValueE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm15ScalarEvolution19createAddRecFromPHIEPNS_7PHINodeE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm15ScalarEvolution16createNodeForPHIEPNS_7PHINodeE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm15ScalarEvolution14createSCEVIterEPNS_5ValueE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN12_GLOBAL__N_119InductiveRangeCheck26extractRangeChecksFromCondEPN4llvm4LoopERNS1_15ScalarEvolutionERNS1_3UseERNS1_15SmallVectorImplIS0_EERNS1_15SmallPtrSetImplIPNS1_5ValueEEE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN12_GLOBAL__N_119InductiveRangeCheck26extractRangeChecksFromCondEPN4llvm4LoopERNS1_15ScalarEvolutionERNS1_3UseERNS1_15SmallVectorImplIS0_EERNS1_15SmallPtrSetImplIPNS1_5ValueEEE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN12_GLOBAL__N_130InductiveRangeCheckElimination3runEPN4llvm4LoopENS1_12function_refIFvS3_bEEE.constprop.0 at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm8IRCEPass3runERNS_8FunctionERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91:41 _ZN4llvm11PassManagerINS_8FunctionENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91:41 _ZN4llvm27ModuleToFunctionPassAdaptor3runERNS_6ModuleERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91:41 _ZN4llvm11PassManagerINS_6ModuleENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) run at /source/src/pipeline.cpp:978:12 operator() at /source/src/jitlayers.cpp:1298:17 operator() at /source/src/jitlayers.cpp:1435:12 [inlined] optimizeModule at /source/src/jitlayers.cpp:2382:18 materialize at /source/src/jitlayers.cpp:905:31 _ZN4llvm3orc19MaterializationTask3runEv at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) dispatch at /source/src/julia-task-dispatcher.h:353:11 _ZN4llvm3orc16ExecutionSession22dispatchOutstandingMUsEv at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm3orc16ExecutionSession17OL_completeLookupESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EESt10shared_ptrINS0_23AsynchronousSymbolQueryEESt8functionIFvRKNS_8DenseMapIPNS0_8JITDylibENS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISF_vEEEENSG_ISD_vEENS_6detail12DenseMapPairISD_SI_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm3orc25InProgressFullLookupState8completeESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm3orc16ExecutionSession19OL_applyQueryPhase1ESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EENS_5ErrorE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm3orc16ExecutionSession6lookupENS0_10LookupKindERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS8_EENS0_15SymbolLookupSetENS0_11SymbolStateENS_15unique_functionIFvNS_8ExpectedINS_8DenseMapINS0_15SymbolStringPtrENS0_17ExecutorSymbolDefENS_12DenseMapInfoISI_vEENS_6detail12DenseMapPairISI_SJ_EEEEEEEEESt8functionIFvRKNSH_IS6_NS_8DenseSetISI_SL_EENSK_IS6_vEENSN_IS6_SV_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) publishCIs at /source/src/jitlayers.cpp:2085:14 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:510:39 jl_compile_method_internal at /source/src/gf.c:3667:27 _jl_invoke at /source/src/gf.c:4120:16 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 #open#333 at ./io.jl:440:0 (pc: 26) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 open at ./io.jl:435:0 (pc: 4) #write#144 at /home/pkgeval/.julia/packages/Arrow/4zFuR/src/write.jl:406:0 (pc: 14) [inlined] write at /home/pkgeval/.julia/packages/Arrow/4zFuR/src/write.jl:405:0 (pc: 4) [inlined] savereplicates at /home/pkgeval/.julia/packages/MixedModels/iYVCb/src/bootstrap.jl:132:0 (pc: 4) unknown function (ip: 0x716d95361569) at (unknown file) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 macro expansion at /home/pkgeval/.julia/packages/MixedModels/iYVCb/test/bootstrap.jl:171:0 (pc: 86) [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.14/Test/src/Test.jl:2246:0 (pc: 118) [inlined] macro expansion at /home/pkgeval/.julia/packages/MixedModels/iYVCb/test/bootstrap.jl:166:0 (pc: 305) [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.14/Test/src/Test.jl:2246:0 (pc: 320) [inlined] top-level scope at /home/pkgeval/.julia/packages/MixedModels/iYVCb/test/bootstrap.jl:91:0 (pc: 2289) jl_invoke_oneshot at /source/src/gf.c:4163:23 ijl_eval_thunk at /source/src/toplevel.c:760:18 jl_toplevel_eval_flex at /source/src/toplevel.c:712:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:602:15 jl_toplevel_eval_flex at /source/src/toplevel.c:684:27 ijl_toplevel_eval at /source/src/toplevel.c:782:12 ijl_toplevel_eval_in at /source/src/toplevel.c:827:13 eval at ./boot.jl:517:0 (pc: 3) include_string at ./loading.jl:3132:0 (pc: 125) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 _include at ./loading.jl:3192:0 (pc: 35) include at ./Base.jl:327:0 (pc: 3) IncludeInto at ./Base.jl:328:0 (pc: 4) jfptr_IncludeInto_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 jl_apply at /source/src/julia.h:2370:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:243:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:706:13 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897:21 ijl_eval_thunk at /source/src/toplevel.c:768:18 jl_toplevel_eval_flex at /source/src/toplevel.c:712:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:602:15 jl_toplevel_eval_flex at /source/src/toplevel.c:684:27 ijl_toplevel_eval at /source/src/toplevel.c:782:12 ijl_toplevel_eval_in at /source/src/toplevel.c:827:13 eval at ./boot.jl:517:0 (pc: 3) include_string at ./loading.jl:3132:0 (pc: 125) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 _include at ./loading.jl:3192:0 (pc: 35) include at ./Base.jl:327:0 (pc: 3) IncludeInto at ./Base.jl:328:0 (pc: 4) jfptr_IncludeInto_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 jl_apply at /source/src/julia.h:2370:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:243:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:706:13 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897:21 ijl_eval_thunk at /source/src/toplevel.c:768:18 jl_toplevel_eval_flex at /source/src/toplevel.c:712:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:602:15 jl_toplevel_eval_flex at /source/src/toplevel.c:684:27 ijl_toplevel_eval at /source/src/toplevel.c:782:12 ijl_toplevel_eval_in at /source/src/toplevel.c:827:13 eval at ./boot.jl:517:0 (pc: 3) exec_options at ./client.jl:321:0 (pc: 353) _start at ./client.jl:596:0 (pc: 35) jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4128:23 [inlined] ijl_apply_generic at /source/src/gf.c:4354:12 jl_apply at /source/src/julia.h:2370:12 [inlined] true_main at /source/src/jlapi.c:971:29 jl_repl_entrypoint at /source/src/jlapi.c:1138:15 main at /source/cli/loader_exe.c:58:15 unknown function (ip: 0x716dee354249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 475143285 (Pool: 475138705; Big: 4580); GC: 122 PkgEval terminated after 2721.64s: test duration exceeded the time limit