Package evaluation to test PyCallJLD on Julia 1.14.0-DEV.2113 (886384998d*) started at 2026-05-03T19:19:50.070 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 15.25s ################################################################################ # Installation # Installing PyCallJLD... Resolving package versions... Installed Lz4_jll ─────────────── v1.10.1+0 Installed VersionParsing ──────── v1.3.0 Installed MicrosoftMPI_jll ────── v10.1.4+3 (no artifacts on this platform) Installed DelimitedFiles ──────── v1.9.1 Installed Compat ──────────────── v3.47.0 Installed MPICH_jll ───────────── v4.3.2+0 Installed libaec_jll ──────────── v1.1.6+0 Installed MacroTools ──────────── v0.5.16 Installed Blosc ───────────────── v0.7.3 Installed Statistics ──────────── v1.11.1 Installed JLD ─────────────────── v0.12.5 Installed PyCall ──────────────── v1.96.4 Installed Xorg_libpciaccess_jll ─ v0.19.0+0 Installed Blosc_jll ───────────── v1.21.7+0 Installed Conda ───────────────── v1.10.3 Installed PrecompileTools ─────── v1.3.3 Installed StructUtils ─────────── v2.8.1 Installed Requires ────────────── v1.3.1 Installed HDF5_jll ────────────── v1.14.6+0 Installed FileIO ──────────────── v1.19.0 Installed OpenMPI_jll ─────────── v5.0.11+0 Installed JSON ────────────────── v1.5.2 Installed Parsers ─────────────── v2.8.4 Installed XML2_jll ────────────── v2.13.9+0 Installed Hwloc_jll ───────────── v2.13.0+1 Installed JLLWrappers ─────────── v1.7.1 Installed HDF5 ────────────────── v0.14.1 Installed Libiconv_jll ────────── v1.18.0+0 Installed Preferences ─────────── v1.5.2 Installed MPIPreferences ──────── v0.1.12 Installed PyCallJLD ───────────── v0.2.1 Installed MPItrampoline_jll ───── v5.5.6+0 Installing 9 artifacts Installed artifact Lz4 239.7 KiB Installed artifact Xorg_libpciaccess 26.2 KiB Installed artifact Blosc 44.2 KiB Installed artifact libaec 50.0 KiB Installed artifact MPICH 3.3 MiB Installed artifact Libiconv 1.9 MiB Installed artifact HDF5 5.7 MiB Installed artifact XML2 2.5 MiB Installed artifact Hwloc 3.5 MiB Updating `~/.julia/environments/v1.14/Project.toml` [de320387] + PyCallJLD v0.2.1 Updating `~/.julia/environments/v1.14/Manifest.toml` [a74b3585] + Blosc v0.7.3 ⌅ [34da2185] + Compat v3.47.0 [8f4d0f93] + Conda v1.10.3 [8bb1440f] + DelimitedFiles v1.9.1 [5789e2e9] + FileIO v1.19.0 ⌅ [f67ccb44] + HDF5 v0.14.1 ⌅ [4138dd39] + JLD v0.12.5 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v1.5.2 [3da0fdf6] + MPIPreferences v0.1.12 [1914dd2f] + MacroTools v0.5.16 [69de0a69] + Parsers v2.8.4 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.2 [438e738f] + PyCall v1.96.4 [de320387] + PyCallJLD v0.2.1 [ae029012] + Requires v1.3.1 [10745b16] + Statistics v1.11.1 [ec057cc2] + StructUtils v2.8.1 [81def892] + VersionParsing v1.3.0 [0b7ba130] + Blosc_jll v1.21.7+0 ⌅ [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.13.0+1 [94ce4f54] + Libiconv_jll v1.18.0+0 [5ced341a] + Lz4_jll v1.10.1+0 ⌅ [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.6+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.11+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.19.0+0 [477f73a3] + libaec_jll v1.1.6+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.1+0 [deac9b47] + LibCURL_jll v8.19.0+0 [e37daf67] + LibGit2_jll v1.9.2+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2026.3.19 [4536629a] + OpenBLAS_jll v0.3.33+0 [458c3c95] + OpenSSL_jll v3.5.6+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.69.0+0 [3f19e933] + p7zip_jll v17.8.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building Conda ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/8f06b0cfa4c514c7b9546756dbae91fcfbc92dc9/build.log` Building PyCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9816a3826b0ebf49ab4926e2b18842ad8b5c8f04/build.log` Building HDF5 ──→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/96d77533eb46e208e801b939db8a27626c166565/build.log` Installation completed after 117.1s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling project... 5.2 s ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. Precompiling package dependencies... Precompiling project... 4.2 s ✓ MacroTools 1.2 s ✓ Statistics 1.0 s ✓ VersionParsing 1.4 s ✓ Requires 1.1 s ✓ DelimitedFiles 1.9 s ✓ StructUtils 1.6 s ✓ Preferences 1.6 s ✓ Statistics → SparseArraysExt 10.0 s ✓ FileIO 1.7 s ✓ JLLWrappers 2.4 s ✓ MPIPreferences 1.5 s ✓ PrecompileTools 11.5 s ✓ Compat 2.4 s ✓ libaec_jll 2.5 s ✓ Xorg_libpciaccess_jll 2.3 s ✓ Libiconv_jll 2.4 s ✓ Lz4_jll 1.6 s ✓ MicrosoftMPI_jll 5.6 s ✓ MPItrampoline_jll 17.8 s ✓ Parsers 2.4 s ✓ XML2_jll 2.4 s ✓ Blosc_jll 8.1 s ✓ JSON 2.3 s ✓ Hwloc_jll 1.5 s ✓ Blosc 2.6 s ✓ Conda 5.9 s ✓ MPICH_jll 5.8 s ✓ OpenMPI_jll 22.4 s ✓ PyCall 6.5 s ✓ HDF5_jll WARNING: Constructor for type "Array" was extended in `HDF5` without explicit qualification or import.  NOTE: Assumed "Array" refers to `Base.Array`. This behavior is deprecated and may differ in future versions.  NOTE: This behavior may have differed in Julia versions prior to 1.12.  Hint: If you intended to create a new generic function of the same name, use `function Array end`.  Hint: To silence the warning, qualify `Array` as `Base.Array` in the method signature or explicitly `import Base: Array`. 10.3 s ✓ HDF5 11.5 s ✓ JLD 13.6 s ✓ PyCallJLD 33 dependencies successfully precompiled in 171 seconds. 38 already precompiled. 1 dependency had output during precompilation: ┌ HDF5 │ WARNING: Constructor for type "Array" was extended in `HDF5` without explicit qualification or import. │ NOTE: Assumed "Array" refers to `Base.Array`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Array end`. │ Hint: To silence the warning, qualify `Array` as `Base.Array` in the method signature or explicitly `import Base: Array`. └ Precompilation completed after 208.75s ################################################################################ # Testing # Testing PyCallJLD Status `/tmp/jl_8sbo3E/Project.toml` ⌅ [4138dd39] JLD v0.12.5 [438e738f] PyCall v1.96.4 [de320387] PyCallJLD v0.2.1 [8dfed614] Test v1.11.0 Status `/tmp/jl_8sbo3E/Manifest.toml` [a74b3585] Blosc v0.7.3 ⌅ [34da2185] Compat v3.47.0 [8f4d0f93] Conda v1.10.3 [8bb1440f] DelimitedFiles v1.9.1 [5789e2e9] FileIO v1.19.0 ⌅ [f67ccb44] HDF5 v0.14.1 ⌅ [4138dd39] JLD v0.12.5 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.5.2 [3da0fdf6] MPIPreferences v0.1.12 [1914dd2f] MacroTools v0.5.16 [69de0a69] Parsers v2.8.4 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.2 [438e738f] PyCall v1.96.4 [de320387] PyCallJLD v0.2.1 [ae029012] Requires v1.3.1 [10745b16] Statistics v1.11.1 [ec057cc2] StructUtils v2.8.1 [81def892] VersionParsing v1.3.0 [0b7ba130] Blosc_jll v1.21.7+0 ⌅ [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.13.0+1 [94ce4f54] Libiconv_jll v1.18.0+0 [5ced341a] Lz4_jll v1.10.1+0 ⌅ [7cb0a576] MPICH_jll v4.3.2+0 [f1f71cc9] MPItrampoline_jll v5.5.6+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.11+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [a65dc6b1] Xorg_libpciaccess_jll v0.19.0+0 [477f73a3] libaec_jll v1.1.6+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.5.1+0 [deac9b47] LibCURL_jll v8.19.0+0 [e37daf67] LibGit2_jll v1.9.2+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2026.3.19 [4536629a] OpenBLAS_jll v0.3.33+0 [458c3c95] OpenSSL_jll v3.5.6+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.69.0+0 [3f19e933] p7zip_jll v17.8.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Error encountered while save FileIO.File{FileIO.DataFormat{:JLD}, String}("/tmp/temp.jld"). Fatal error: ERROR: LoadError: FieldError: type DataType has no field `size`, available fields: `name`, `super`, `parameters`, `types`, `instance`, `layout`, `hash`, `flags` Stacktrace: [1] ismutabletype(t::DataType) @ Base ./Base_compiler.jl:52 [inlined] [2] h5fieldtype(parent::JLD.JldFile, T::Any, commit::Bool) @ JLD ~/.julia/packages/JLD/9wjVw/src/jld_types.jl:313 [3] _write(parent::JLD.JldFile, path::String, data::Vector{PyObject}, wsession::JLD.JldWriteSession; kargs::@Kwargs{}) @ JLD ~/.julia/packages/JLD/9wjVw/src/JLD.jl:593 [4] _write(parent::JLD.JldFile, path::String, data::Vector{PyObject}, wsession::JLD.JldWriteSession) @ JLD ~/.julia/packages/JLD/9wjVw/src/JLD.jl:589 [5] write(parent::JLD.JldFile, name::String, data::Vector{PyObject}, wsession::JLD.JldWriteSession; kargs::@Kwargs{}) @ JLD ~/.julia/packages/JLD/9wjVw/src/JLD.jl:542 [6] (::JLD.var"#37#38"{String, Vector{PyObject}, Tuple{}})(file::JLD.JldFile) @ JLD ~/.julia/packages/JLD/9wjVw/src/JLD.jl:1261 [7] jldopen(::JLD.var"#37#38"{String, Vector{PyObject}, Tuple{}}, ::String, ::Vararg{String}; kws::@Kwargs{compatible::Bool, compress::Bool}) @ JLD ~/.julia/packages/JLD/9wjVw/src/JLD.jl:262 [8] fileio_save(::FileIO.File{FileIO.DataFormat{:JLD}, String}, ::String, ::Vector{PyObject}; compatible::Bool, compress::Bool) @ JLD ~/.julia/packages/JLD/9wjVw/src/JLD.jl:1259 [9] fileio_save(::FileIO.File{FileIO.DataFormat{:JLD}, String}, ::String, ::Vector{PyObject}) @ JLD ~/.julia/packages/JLD/9wjVw/src/JLD.jl:1255 [10] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted, ::String, ::Vararg{Any}; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/9lYsu/src/loadsave.jl:219 [11] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted, ::String, ::Vector{PyObject}) @ FileIO ~/.julia/packages/FileIO/9lYsu/src/loadsave.jl:196 [12] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::Symbol, ::String, ::String, ::Vararg{Any}; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/9lYsu/src/loadsave.jl:185 [13] save(::String, ::String, ::Vararg{Any}; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/9lYsu/src/loadsave.jl:129 [14] save(::String, ::String, ::Vector{PyObject}) @ FileIO ~/.julia/packages/FileIO/9lYsu/src/loadsave.jl:125 [15] top-level scope @ ~/.julia/packages/PyCallJLD/ZrHbU/test/runtests.jl:10 [16] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:327 [17] top-level scope @ none:6 [18] eval(m::Module, e::Any) @ Core ./boot.jl:517 [19] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [20] _start() @ Base ./client.jl:593 Stacktrace: [1] handle_error(e::FieldError, q::Base.PkgId, bt::Vector{Union{Ptr{Nothing}, Base.InterpreterIP}}) @ FileIO ~/.julia/packages/FileIO/9lYsu/src/error_handling.jl:73 [2] handle_exceptions(exceptions::Vector{Tuple{Any, Union{Base.PkgId, Module}, Vector}}, action::String) @ FileIO ~/.julia/packages/FileIO/9lYsu/src/error_handling.jl:66 [3] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted, ::String, ::Vararg{Any}; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/9lYsu/src/loadsave.jl:228 [4] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted, ::String, ::Vector{PyObject}) @ FileIO ~/.julia/packages/FileIO/9lYsu/src/loadsave.jl:196 [5] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::Symbol, ::String, ::String, ::Vararg{Any}; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/9lYsu/src/loadsave.jl:185 [6] save(::String, ::String, ::Vararg{Any}; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/9lYsu/src/loadsave.jl:129 [7] save(::String, ::String, ::Vector{PyObject}) @ FileIO ~/.julia/packages/FileIO/9lYsu/src/loadsave.jl:125 [8] top-level scope @ ~/.julia/packages/PyCallJLD/ZrHbU/test/runtests.jl:10 [9] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:327 [10] top-level scope @ none:6 [11] eval(m::Module, e::Any) @ Core ./boot.jl:517 [12] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [13] _start() @ Base ./client.jl:593 in expression starting at /home/pkgeval/.julia/packages/PyCallJLD/ZrHbU/test/runtests.jl:8 Testing failed after 50.94s ERROR: LoadError: Package PyCallJLD errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3162 [3] Cmd(cmd::Cmd) @ Base /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3025 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:586 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [7] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [8] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [10] include(mod::Module, _path::String) @ Base ./Base.jl:326 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:352 [12] _start() @ Base ./client.jl:593 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 447.74s: package tests unexpectedly errored