Package evaluation to test Tortuosity on Julia 1.14.0-DEV.2064 (1d5dcac2d2*) started at 2026-04-22T01:29:39.271 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 14.83s ################################################################################ # Installation # Installing Tortuosity... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [80bb5c7f] + Tortuosity v0.0.7 Updating `~/.julia/environments/v1.14/Manifest.toml` [47edcb42] + ADTypes v1.21.0 [621f4979] + AbstractFFTs v1.5.0 [7d9f7c33] + Accessors v0.1.44 [79e6a3ab] + Adapt v4.5.2 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.24.0 [a9b6321e] + Atomix v1.1.3 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] + BracketingNonlinearSolve v1.12.1 [2a0fbf3d] + CPUSummary v0.2.7 [aafaddc9] + CatIndices v0.2.2 [fb6a15b2] + CloseOpenIntervals v0.1.13 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [38540f10] + CommonSolve v0.2.6 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [ed09eef8] + ComputationalResources v0.3.2 [2569d6c7] + ConcreteStructs v0.2.3 [187b0558] + ConstructionBase v1.6.0 [adafc99b] + CpuId v0.3.1 [dc8bdbbb] + CustomUnitRanges v1.0.2 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.4 [2b5f629d] + DiffEqBase v6.218.0 [459566f4] + DiffEqCallbacks v4.15.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.16 [31c24e10] + Distributions v0.25.125 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.7 [f151be2c] + EnzymeCore v0.8.19 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [4f61f5a4] + FFTViews v0.3.2 [7a1cc6ca] + FFTW v1.10.0 [7034ab61] + FastBroadcast v1.3.1 [9aa1b823] + FastClosures v0.3.2 [a4df4552] + FastPower v1.3.1 [1a297f60] + FillArrays v1.16.0 [6a86dc24] + FiniteDiff v2.30.0 [53c48c17] + FixedPointNumbers v0.8.5 [f6369f11] + ForwardDiff v1.3.3 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v1.5.0 [46192b85] + GPUArraysCore v0.2.0 [f67ccb44] + HDF5 v0.17.3 [3e5b6fbb] + HostCPUFeatures v0.1.18 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [c817782e] + ImageBase v0.1.7 [a09fc81d] + ImageCore v0.10.5 [6a3955dd] + ImageFiltering v0.7.12 [787d08f9] + ImageMorphology v0.4.7 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [ae98c720] + Jieko v0.2.1 [63c18a36] + KernelAbstractions v0.9.41 [ba0b0d4f] + Krylov v0.10.6 [10f19ff3] + LayoutPointers v0.1.17 [7ed4a6bd] + LinearSolve v3.75.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [bdcacae8] + LoopVectorization v0.12.173 ⌅ [2fda8390] + LsqFit v0.15.1 [3da0fdf6] + MPIPreferences v0.1.12 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [dbb5928d] + MappedArrays v0.4.3 [bb5d69b7] + MaybeInplace v0.1.4 [e1d29d7a] + Missings v1.2.0 [e94cdb99] + MosaicViews v0.3.4 [2e0e35c7] + Moshi v0.3.7 [46d2c3a1] + MuladdMacro v0.2.4 ⌅ [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [b946abbf] + NaNStatistics v0.6.56 [be0214bd] + NonlinearSolveBase v2.25.0 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [bbf590c4] + OrdinaryDiffEqCore v3.33.0 [358294b1] + OrdinaryDiffEqStabilizedRK v1.11.1 [90014a1f] + PDMats v0.11.37 [5432bcbf] + PaddedViews v0.5.12 [f517fe37] + Polyester v0.7.19 [1d0040c9] + PolyesterWeave v0.2.2 [d236fae5] + PreallocationTools v1.2.0 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.2 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.3 [3cdcf5f2] + RecipesBase v1.3.4 ⌅ [731186ca] + RecursiveArrayTools v3.54.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [7e49a35a] + RuntimeGeneratedFunctions v0.5.18 [94e857df] + SIMDTypes v0.1.0 [476501e8] + SLEEFPirates v0.6.43 ⌅ [0bca4576] + SciMLBase v2.155.0 [19f34311] + SciMLJacobianOperators v0.1.13 [a6db7da4] + SciMLLogging v1.9.1 [c0aeaf25] + SciMLOperators v1.16.0 [431bcebd] + SciMLPublic v1.0.1 [53ae85a6] + SciMLStructures v1.10.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.7.2 [cae243ae] + StackViews v0.1.2 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.9.0 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [7792a7ef] + StrideArraysCore v0.5.8 [2efcf032] + SymbolicIndexingInterface v0.3.46 [62fd8b95] + TensorCore v0.1.1 [8290d209] + ThreadingUtilities v0.5.5 [06e1c1a7] + TiledIteration v0.5.0 [a759f4b9] + TimerOutputs v0.5.29 [80bb5c7f] + Tortuosity v0.0.7 [781d530d] + TruncatedStacktraces v1.4.0 [3a884ed6] + UnPack v1.0.2 [013be700] + UnsafeAtomics v0.3.1 [3d5dd08c] + VectorizationBase v0.21.72 [f5851436] + FFTW_jll v3.3.11+0 [0234f1f7] + HDF5_jll v2.1.2+0 [e33a78d0] + Hwloc_jll v2.13.0+1 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] + MKL_jll v2025.2.0+0 [b5ada748] + MPIABI_jll v0.1.4+0 [7cb0a576] + MPICH_jll v5.0.1+0 [f1f71cc9] + MPItrampoline_jll v5.5.6+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.11+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 ⌅ [2b3700d1] + aws_c_auth_jll v0.9.6+0 [70f11efc] + aws_c_cal_jll v0.9.13+0 [73048d1d] + aws_c_common_jll v0.12.6+0 [73a04cd5] + aws_c_compression_jll v0.3.2+0 [3254fc65] + aws_c_http_jll v0.10.13+0 [13c41daa] + aws_c_io_jll v0.26.3+0 ⌅ [bd1f34fb] + aws_c_s3_jll v0.11.5+0 [1282aa60] + aws_c_sdkutils_jll v0.2.4+1 [b2a88e68] + aws_checksums_jll v0.2.10+0 [c4b69c83] + dlfcn_win32_jll v1.4.2+0 [477f73a3] + libaec_jll v1.1.6+0 [9aeb927a] + mpif_jll v0.1.7+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [cddc5d3d] + s2n_tls_jll v1.7.2+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.19.0+0 [e37daf67] + LibGit2_jll v1.9.2+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2026.3.19 [4536629a] + OpenBLAS_jll v0.3.30+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.6+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.69.0+0 [3f19e933] + p7zip_jll v17.8.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 12.55s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling project... 25.3 s ✓ LinearSolve → LinearSolveCUDAExt 25.8 s ✓ DiffEqBase → DiffEqBaseCUDAExt 66.6 s ✓ Tortuosity 47.4 s ✓ Tortuosity → TortuosityCUDAExt 4 dependencies successfully precompiled in 178 seconds. 322 already precompiled. Precompilation completed after 211.51s ################################################################################ # Testing # Testing Tortuosity Status `/tmp/jl_aocOQ6/Project.toml` [a9b6321e] Atomix v1.1.3 ⌅ [052768ef] CUDA v5.11.0 [38540f10] CommonSolve v0.2.6 [459566f4] DiffEqCallbacks v4.15.0 [f67ccb44] HDF5 v0.17.3 [6a3955dd] ImageFiltering v0.7.12 [787d08f9] ImageMorphology v0.4.7 [033835bb] JLD2 v0.6.4 [63c18a36] KernelAbstractions v0.9.41 [7ed4a6bd] LinearSolve v3.75.0 ⌅ [2fda8390] LsqFit v0.15.1 [b946abbf] NaNStatistics v0.6.56 [358294b1] OrdinaryDiffEqStabilizedRK v1.11.1 [aea7be01] PrecompileTools v1.3.3 [276daf66] SpecialFunctions v2.7.2 [10745b16] Statistics v1.11.1 [80bb5c7f] Tortuosity v0.0.7 [37e2e46d] LinearAlgebra v1.13.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_aocOQ6/Manifest.toml` [47edcb42] ADTypes v1.21.0 [621f4979] AbstractFFTs v1.5.0 [7d9f7c33] Accessors v0.1.44 [79e6a3ab] Adapt v4.5.2 [66dad0bd] AliasTables v1.1.3 [4fba245c] ArrayInterface v7.24.0 [a9b6321e] Atomix v1.1.3 [ab4f0b2a] BFloat16s v0.6.1 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] BracketingNonlinearSolve v1.12.1 [fa961155] CEnum v0.5.0 [2a0fbf3d] CPUSummary v0.2.7 ⌅ [052768ef] CUDA v5.11.0 ⌅ [1af6417a] CUDA_Runtime_Discovery v1.0.0 [aafaddc9] CatIndices v0.2.2 [0b6fb165] ChunkCodecCore v1.0.1 [4c0bbee4] ChunkCodecLibZlib v1.0.0 [55437552] ChunkCodecLibZstd v1.0.0 [fb6a15b2] CloseOpenIntervals v0.1.13 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 [38540f10] CommonSolve v0.2.6 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [ed09eef8] ComputationalResources v0.3.2 [2569d6c7] ConcreteStructs v0.2.3 [187b0558] ConstructionBase v1.6.0 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [dc8bdbbb] CustomUnitRanges v1.0.2 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.4 [e2d170a0] DataValueInterfaces v1.0.0 [2b5f629d] DiffEqBase v6.218.0 [459566f4] DiffEqCallbacks v4.15.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.16 [31c24e10] Distributions v0.25.125 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.7 [f151be2c] EnzymeCore v0.8.19 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [4f61f5a4] FFTViews v0.3.2 [7a1cc6ca] FFTW v1.10.0 [7034ab61] FastBroadcast v1.3.1 [9aa1b823] FastClosures v0.3.2 [a4df4552] FastPower v1.3.1 [5789e2e9] FileIO v1.18.0 [1a297f60] FillArrays v1.16.0 [6a86dc24] FiniteDiff v2.30.0 [53c48c17] FixedPointNumbers v0.8.5 [f6369f11] ForwardDiff v1.3.3 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v1.5.0 [0c68f7d7] GPUArrays v11.5.1 [46192b85] GPUArraysCore v0.2.0 [61eb1bfa] GPUCompiler v1.9.1 [096a3bc2] GPUToolbox v1.1.1 [f67ccb44] HDF5 v0.17.3 [076d061b] HashArrayMappedTries v0.2.0 [3e5b6fbb] HostCPUFeatures v0.1.18 [34004b35] HypergeometricFunctions v0.3.28 [615f187c] IfElse v0.1.1 [c817782e] ImageBase v0.1.7 [a09fc81d] ImageCore v0.10.5 [6a3955dd] ImageFiltering v0.7.12 [787d08f9] ImageMorphology v0.4.7 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.6.4 [692b3bcd] JLLWrappers v1.7.1 [ae98c720] Jieko v0.2.1 [63c18a36] KernelAbstractions v0.9.41 [ba0b0d4f] Krylov v0.10.6 [929cbde3] LLVM v9.4.6 [8b046642] LLVMLoopInfo v1.0.0 [b964fa9f] LaTeXStrings v1.4.0 [10f19ff3] LayoutPointers v0.1.17 [7ed4a6bd] LinearSolve v3.75.0 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 [bdcacae8] LoopVectorization v0.12.173 ⌅ [2fda8390] LsqFit v0.15.1 [3da0fdf6] MPIPreferences v0.1.12 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [dbb5928d] MappedArrays v0.4.3 [bb5d69b7] MaybeInplace v0.1.4 [e1d29d7a] Missings v1.2.0 [e94cdb99] MosaicViews v0.3.4 [2e0e35c7] Moshi v0.3.7 [46d2c3a1] MuladdMacro v0.2.4 ⌅ [d41bc354] NLSolversBase v7.10.0 [5da4648a] NVTX v1.0.3 [77ba4419] NaNMath v1.1.3 [b946abbf] NaNStatistics v0.6.56 [be0214bd] NonlinearSolveBase v2.25.0 [6fe1bfb0] OffsetArrays v1.17.0 [bac558e1] OrderedCollections v1.8.1 [bbf590c4] OrdinaryDiffEqCore v3.33.0 [358294b1] OrdinaryDiffEqStabilizedRK v1.11.1 [90014a1f] PDMats v0.11.37 [5432bcbf] PaddedViews v0.5.12 [f517fe37] Polyester v0.7.19 [1d0040c9] PolyesterWeave v0.2.2 [d236fae5] PreallocationTools v1.2.0 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.2 [08abe8d2] PrettyTables v3.3.2 [43287f4e] PtrArrays v1.4.0 [1fd47b50] QuadGK v2.11.3 [74087812] Random123 v1.7.1 [e6cf234a] RandomNumbers v1.6.0 [3cdcf5f2] RecipesBase v1.3.4 ⌅ [731186ca] RecursiveArrayTools v3.54.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [7e49a35a] RuntimeGeneratedFunctions v0.5.18 [94e857df] SIMDTypes v0.1.0 [476501e8] SLEEFPirates v0.6.43 ⌅ [0bca4576] SciMLBase v2.155.0 [19f34311] SciMLJacobianOperators v0.1.13 [a6db7da4] SciMLLogging v1.9.1 [c0aeaf25] SciMLOperators v1.16.0 [431bcebd] SciMLPublic v1.0.1 [53ae85a6] SciMLStructures v1.10.0 [7e506255] ScopedValues v1.6.0 [6c6a2e73] Scratch v1.3.0 [efcf1570] Setfield v1.1.2 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.7.2 [cae243ae] StackViews v0.1.2 [aedffcd0] Static v1.3.1 [0d7ed370] StaticArrayInterface v1.9.0 [90137ffa] StaticArrays v1.9.18 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.10 [4c63d2b9] StatsFuns v1.5.2 [7792a7ef] StrideArraysCore v0.5.8 [892a3eda] StringManipulation v0.4.4 [2efcf032] SymbolicIndexingInterface v0.3.46 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [62fd8b95] TensorCore v0.1.1 [8290d209] ThreadingUtilities v0.5.5 [06e1c1a7] TiledIteration v0.5.0 [a759f4b9] TimerOutputs v0.5.29 [80bb5c7f] Tortuosity v0.0.7 [e689c965] Tracy v0.1.6 [781d530d] TruncatedStacktraces v1.4.0 [3a884ed6] UnPack v1.0.2 [013be700] UnsafeAtomics v0.3.1 [3d5dd08c] VectorizationBase v0.21.72 [d1e2174e] CUDA_Compiler_jll v0.4.3+0 [4ee394cb] CUDA_Driver_jll v13.2.1+0 [76a88914] CUDA_Runtime_jll v0.21.0+1 [f5851436] FFTW_jll v3.3.11+0 [0234f1f7] HDF5_jll v2.1.2+0 [e33a78d0] Hwloc_jll v2.13.0+1 [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0 [9c1d0b0a] JuliaNVTXCallbacks_jll v0.2.1+0 [dad2f222] LLVMExtra_jll v0.0.38+0 [ad6e5548] LibTracyClient_jll v0.13.1+0 [94ce4f54] Libiconv_jll v1.18.0+0 [856f044c] MKL_jll v2025.2.0+0 [b5ada748] MPIABI_jll v0.1.4+0 [7cb0a576] MPICH_jll v5.0.1+0 [f1f71cc9] MPItrampoline_jll v5.5.6+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [e98f9f5b] NVTX_jll v3.2.2+0 [fe0851c0] OpenMPI_jll v5.0.11+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [a65dc6b1] Xorg_libpciaccess_jll v0.18.1+0 ⌅ [2b3700d1] aws_c_auth_jll v0.9.6+0 [70f11efc] aws_c_cal_jll v0.9.13+0 [73048d1d] aws_c_common_jll v0.12.6+0 [73a04cd5] aws_c_compression_jll v0.3.2+0 [3254fc65] aws_c_http_jll v0.10.13+0 [13c41daa] aws_c_io_jll v0.26.3+0 ⌅ [bd1f34fb] aws_c_s3_jll v0.11.5+0 [1282aa60] aws_c_sdkutils_jll v0.2.4+1 [b2a88e68] aws_checksums_jll v0.2.10+0 [1e29f10c] demumble_jll v1.3.0+0 [c4b69c83] dlfcn_win32_jll v1.4.2+0 [477f73a3] libaec_jll v1.1.6+0 [9aeb927a] mpif_jll v0.1.7+0 [1317d2d5] oneTBB_jll v2022.0.0+1 [cddc5d3d] s2n_tls_jll v1.7.2+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.19.0+0 [e37daf67] LibGit2_jll v1.9.2+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2026.3.19 [4536629a] OpenBLAS_jll v0.3.30+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.6+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.69.0+0 [3f19e933] p7zip_jll v17.8.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ┌ Info: Metal not available: ArgumentError: Package Metal not found in current path. └ - Run `import Pkg; Pkg.add("Metal")` to install the Metal package. WARNING: Method definition sparse_to_portable(SparseArrays.SparseMatrixCSC{Tv, Ti}) where {Tv, Ti} in module Main at /home/pkgeval/.julia/packages/Tortuosity/DDUG4/test/test_sparse_ops.jl:12 overwritten at /home/pkgeval/.julia/packages/Tortuosity/DDUG4/test/test_impl_parity.jl:35. WARNING: Method definition to_dense(Tortuosity.PortableSparseCSC{T, Ti, V, Vi} where Vi<:AbstractArray{Ti, 1} where V<:AbstractArray{T, 1} where Ti<:Integer where T) in module Main at /home/pkgeval/.julia/packages/Tortuosity/DDUG4/test/test_sparse_ops.jl:21 overwritten at /home/pkgeval/.julia/packages/Tortuosity/DDUG4/test/test_impl_parity.jl:44. [ Info: τ: 2.14217 [ Info: Generating/loading the voxel image [ Info: Setting up τ simulation (assembling Ax = b) [ Info: Solving the system of equations [ Info: Average concentration: 0.2355187994596854 [ Info: τ (variable diffusivity): 11.06738 [ Info: τ (ground truth): 3.43926 23.757507 seconds (15.58 k allocations: 398.080 MiB, 0.19% gc time, 0.11% compilation time) [ Info: sol.retcode = Terminated, t[end] = 0.8, snapshots = 9 [ Info: τ: 1.56501 [ Info: Skipping CUDA parity tests (CUDA not functional) [ Info: Skipping GPU end-to-end tests (no GPU backend functional) Test Summary: | Pass Total Time Tortuosity.jl | 299 299 7m56.5s Utility functions | 19 19 7.1s phase_fraction | 14 14 3.3s No labels passed | 4 4 2.4s Single label passed | 3 3 0.8s Multiple labels passed | 4 4 0.1s Scalar and array inputs match | 3 3 0.0s Boolean index helpers | 5 5 1.2s Basic geometries | 16 16 40.2s Open space 3D, x-axis | 2 2 31.3s Open space 3D, y-axis | 2 2 1.5s Open space 3D, z-axis | 2 2 1.4s Straight channel (half-open cube) | 3 3 0.1s Open space 2D, x-axis | 2 2 3.1s Open space 2D, y-axis | 2 2 1.0s Straight channel 2D (half-open square) | 3 3 0.0s Blobs (Gaussian noise) | 12 12 2m16.5s Blobs 3D, x-axis | 2 2 0.9s Blobs 3D, y-axis | 2 2 0.7s Blobs 3D, z-axis | 2 2 0.8s Blobs 3D, variable diffusivity, x-axis | 2 2 12.8s Blobs 3D, variable diffusivity, y-axis | 2 2 4.8s Blobs 3D, variable diffusivity, z-axis | 2 2 5.8s Transient | 175 175 3m07.6s slab_concentration — boundary conditions | 8 8 0.0s slab_concentration — steady state is linear | 5 5 0.0s slab_concentration — D scaling | 1 1 0.0s slab_concentration — vector of times | 2 2 3.0s slab_mass_uptake — limits | 3 3 1.4s slab_mass_uptake — monotonically increasing | 1 1 2.5s slab_flux — steady state | 5 5 0.0s slab_flux — zero at t=0 | 2 2 7.3s slab_cumulative_flux — cumulative | 3 3 6.0s TransientDiffusionProblem — default parameters | 4 4 4.3s TransientDiffusionProblem — custom parameters | 3 3 0.0s TransientDiffusionProblem — insulated outlet | 1 1 2.7s TransientDiffusionProblem — time-dependent boundary | 2 2 1.2s TransientDiffusionProblem — show | 3 3 0.2s Operator — Dirichlet rows are zeroed | 32 32 1.7s Operator — insulated boundary rows are NOT zeroed | 16 16 0.9s apply_boundaries! — Dirichlet on both faces | 2 2 1.2s apply_boundaries! — insulated outlet | 2 2 0.0s apply_boundaries! — time-dependent inlet | 2 2 1.0s solve — basic time progression | 4 4 22.1s solve — sol.u is CPU even under GPU-style code path | 1 1 0.1s TransientSolution — show | 3 3 0.1s StopAtSteadyState — terminates on small du/dt | 2 2 13.9s StopAtSaturation — terminates at target mean | 2 2 14.3s StopAtFluxBalance — terminates near steady state | 2 2 15.0s StopAtPeriodicState — detects periodic steady state | 2 2 17.8s CallbackSet — compose stop condition with tspan cap | 2 2 0.0s Open space transient — x-axis | 3 3 2.6s Open space transient — y-axis | 3 3 2.8s Open space transient — z-axis | 3 3 0.2s fit_effective_diffusivity — TransientSolution wrapper | 12 12 31.4s fit_effective_diffusivity — fully-open slab recovers D to machine precision | 12 12 1.3s fit_effective_diffusivity — depth endpoints hit Dirichlet values | 2 2 0.0s fit_effective_diffusivity — :mass with auto-late t_fit default | 12 12 2.3s fit_effective_diffusivity — t_fit auto-selection rules | 9 9 1.3s mass_uptake — c0_total reference behavior | 4 4 0.4s PortableSparseCSC operations | 32 32 12.4s dropzeros! | 16 16 3.7s set_diag! | 5 5 2.4s get_diag | 3 3 1.4s zero_rows_cols! | 4 4 2.0s zero_rows! | 4 4 0.4s Cross-implementation parity | 42 42 52.6s apply_dirichlet_bc! (ref) vs apply_dirichlet_bc_fast! (SparseMatrixCSC) | 12 12 6.6s apply_dirichlet_bc_fast!(::SparseMatrixCSC) vs (::PortableSparseCSC) | 12 12 11.9s _build_connectivity_list_cpu vs _ka (CPU backend) | 6 6 4.0s laplacian(::SparseMatrixCSC) vs laplacian(::PortableSparseCSC) | 6 6 6.9s zero_rows!(::SparseMatrixCSC) vs zero_rows!(::PortableSparseCSC) | 6 6 5.0s Example scripts | 3 3 40.0s demo_basic.jl | 1 1 11.4s demo_variable_diffusivity.jl | 1 1 2.9s demo_transient.jl | 1 1 25.4s Testing Tortuosity tests passed Testing completed after 554.71s PkgEval succeeded after 825.52s