Package evaluation to test Pajarito on Julia 1.14.0-DEV.2064 (1d5dcac2d2*) started at 2026-04-21T16:51:16.823


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...
  Activating project at `~/.julia/environments/v1.14`

Set-up completed after 15.24s


################################################################################
# Installation
#

Installing Pajarito...
   Resolving package versions...
    Updating `~/.julia/environments/v1.14/Project.toml`
  [2f354839] + Pajarito v0.8.2
    Updating `~/.julia/environments/v1.14/Manifest.toml`
  [6e4b80f9] + BenchmarkTools v1.8.0
  [523fee87] + CodecBzip2 v0.8.5
  [944b1d66] + CodecZlib v0.7.8
  [bbf7d656] + CommonSubexpressions v0.3.1
  [34da2185] + Compat v4.18.1
  [163ba53b] + DiffResults v1.1.0
  [b552c78f] + DiffRules v1.15.1
  [ffbed154] + DocStringExtensions v0.9.5
  [f6369f11] + ForwardDiff v1.3.3
  [92d709cd] + IrrationalConstants v0.2.6
  [692b3bcd] + JLLWrappers v1.7.1
  [682c06a0] + JSON v1.5.0
  [4076af6c] + JuMP v1.30.0
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [1914dd2f] + MacroTools v0.5.16
  [b8f27783] + MathOptInterface v1.50.1
  [d8a4904e] + MutableArithmetics v1.7.1
  [77ba4419] + NaNMath v1.1.3
  [bac558e1] + OrderedCollections v1.8.1
  [2f354839] + Pajarito v0.8.2
  [69de0a69] + Parsers v2.8.3
  [aea7be01] + PrecompileTools v1.3.3
  [21216c6a] + Preferences v1.5.2
  [276daf66] + SpecialFunctions v2.7.2
  [1e83bf80] + StaticArraysCore v1.4.4
  [10745b16] + Statistics v1.11.1
  [ec057cc2] + StructUtils v2.7.2
  [3bb67fe8] + TranscodingStreams v0.11.3
  [6e34b625] + Bzip2_jll v1.0.9+0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [de0858da] + Printf v1.11.0
  [9abbd945] + Profile v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v1.0.0
  [9e88b42a] + Serialization v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [f489334b] + StyledStrings v1.13.0
  [fa267f1f] + TOML v1.0.3
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [4536629a] + OpenBLAS_jll v0.3.30+0
  [05823500] + OpenLibm_jll v0.8.7+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [83775a58] + Zlib_jll v1.3.2+0
  [8e850b90] + libblastrampoline_jll v5.15.0+0

Installation completed after 5.95s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...
Precompiling project...
WARNING: Method definition eigencopy_oftype(LinearAlgebra.UpperHessenberg{T, S} where S<:AbstractArray{T, 2} where T, Any) in module LinearAlgebra at /source/usr/share/julia/stdlib/v1.14/LinearAlgebra/src/hessenberg.jl:448 overwritten in module GenericLinearAlgebra at /home/pkgeval/.julia/packages/GenericLinearAlgebra/WvuVM/src/eigenGeneral.jl:15.
ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation.
   1.7 s  ? GenericLinearAlgebra
  13.3 s  ✓ GLPK
  20.3 s  ✓ Pajarito
  13.9 s  ✓ LowRankOpt
ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("14197337-ba66-59df-a3e3-ca00e7dcff7a"), "GenericLinearAlgebra") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0)
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:56
  [2] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2815
  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2669
  [4] macro expansion
    @ ./loading.jl:2596 [inlined]
  [5] String(s::Symbol)
    @ Base ./lock.jl:376 [inlined]
  [6] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2560
  [7] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2536 [inlined]
  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)
    @ Base ./module.jl:36 [inlined]
  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [10] _eval_using(to::Module, path::Expr, flags::UInt8)
    @ Base ./module.jl:137 [inlined]
 [11] top-level scope
    @ ~/.julia/packages/Hypatia/q5kAT/src/Hypatia.jl:18
 [12] include(mod::Module, _path::String)
    @ Base ./Base.jl:326
 [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3268
 [14] top-level scope
    @ stdin:5
 [15] eval(m::Module, e::Any)
    @ Core ./boot.jl:517
 [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:3110
 [17] materialize(bc::Base.Broadcast.Broadcasted{Base.Broadcast.DefaultArrayStyle{1}, Nothing, Type{Symbol}, Tuple{Vector{SubString{String}}}})
    @ Base.Broadcast ./loading.jl:3120 [inlined]
 [18] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:350
 [19] _start()
    @ Base ./client.jl:593
in expression starting at /home/pkgeval/.julia/packages/Hypatia/q5kAT/src/Hypatia.jl:8
in expression starting at stdin:5
              ✗ Hypatia
  3 dependencies successfully precompiled in 54 seconds. 91 already precompiled.
  1 dependency failed but may be precompilable after restarting julia
  1 dependency had output during precompilation:
┌ GenericLinearAlgebra
│  WARNING: Method definition eigencopy_oftype(LinearAlgebra.UpperHessenberg{T, S} where S<:AbstractArray{T, 2} where T, Any) in module LinearAlgebra at /source/usr/share/julia/stdlib/v1.14/LinearAlgebra/src/hessenberg.jl:448 overwritten in module GenericLinearAlgebra at /home/pkgeval/.julia/packages/GenericLinearAlgebra/WvuVM/src/eigenGeneral.jl:15.
│  ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation.
└  

Precompilation completed after 82.7s


################################################################################
# Testing
#

     Testing Pajarito
      Status `/tmp/jl_5eipcF/Project.toml`
  [60bf3e95] GLPK v1.2.1
  [b99e6be6] Hypatia v0.9.2
  [4076af6c] JuMP v1.30.0
  [b8f27783] MathOptInterface v1.50.1
  [2f354839] Pajarito v0.8.2
  [37e2e46d] LinearAlgebra v1.13.0
  [de0858da] Printf v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_5eipcF/Manifest.toml`
  [6e4b80f9] BenchmarkTools v1.8.0
  [523fee87] CodecBzip2 v0.8.5
  [944b1d66] CodecZlib v0.7.8
  [861a8166] Combinatorics v1.1.0
  [bbf7d656] CommonSubexpressions v0.3.1
  [34da2185] Compat v4.18.1
  [163ba53b] DiffResults v1.1.0
  [b552c78f] DiffRules v1.15.1
  [ffbed154] DocStringExtensions v0.9.5
  [e2ba6199] ExprTools v0.1.10
  [9aa1b823] FastClosures v0.3.2
  [1a297f60] FillArrays v1.16.0
  [f6369f11] ForwardDiff v1.3.3
  [60bf3e95] GLPK v1.2.1
  [14197337] GenericLinearAlgebra v0.4.0
  [b99e6be6] Hypatia v0.9.2
  [92d709cd] IrrationalConstants v0.2.6
  [42fd0dbc] IterativeSolvers v0.9.4
  [692b3bcd] JLLWrappers v1.7.1
  [682c06a0] JSON v1.5.0
  [4076af6c] JuMP v1.30.0
⌅ [0b1a1467] KrylovKit v0.9.5
  [7a12625a] LinearMaps v3.11.4
  [5c8ed15e] LinearOperators v2.13.0
  [2ab3a3ac] LogExpFunctions v0.3.29
  [607ca3ad] LowRankOpt v0.2.1
  [1914dd2f] MacroTools v0.5.16
  [b8f27783] MathOptInterface v1.50.1
  [d8a4904e] MutableArithmetics v1.7.1
  [a4795742] NLPModels v0.21.12
  [792afdf1] NLPModelsJuMP v0.13.5
  [77ba4419] NaNMath v1.1.3
  [bac558e1] OrderedCollections v1.8.1
  [65ce6f38] PackageExtensionCompat v1.0.2
  [2f354839] Pajarito v0.8.2
  [69de0a69] Parsers v2.8.3
  [3a141323] PolynomialRoots v1.0.0
  [aea7be01] PrecompileTools v1.3.3
  [21216c6a] Preferences v1.5.2
  [3cdcf5f2] RecipesBase v1.3.4
  [ff4d7338] SolverCore v0.3.10
  [276daf66] SpecialFunctions v2.7.2
  [1e83bf80] StaticArraysCore v1.4.4
  [10745b16] Statistics v1.11.1
  [ec057cc2] StructUtils v2.7.2
  [a759f4b9] TimerOutputs v0.5.29
  [3bb67fe8] TranscodingStreams v0.11.3
  [c4a57d5a] UnsafeArrays v1.0.9
  [409d34a3] VectorInterface v0.5.0
  [6e34b625] Bzip2_jll v1.0.9+0
  [e8aa6df9] GLPK_jll v5.0.1+1
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [f43a241f] Downloads v1.7.0
  [7b1f6079] FileWatching v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0
  [b27032c2] LibCURL v1.0.0
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.13.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [44cfe95a] Pkg v1.14.0
  [de0858da] Printf v1.11.0
  [9abbd945] Profile v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v1.0.0
  [9e88b42a] Serialization v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [f489334b] StyledStrings v1.13.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [781609d7] GMP_jll v6.3.0+2
  [deac9b47] LibCURL_jll v8.19.0+0
  [e37daf67] LibGit2_jll v1.9.2+0
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2026.3.19
  [4536629a] OpenBLAS_jll v0.3.30+0
  [05823500] OpenLibm_jll v0.8.7+0
  [458c3c95] OpenSSL_jll v3.5.6+0
  [efcefdf7] PCRE2_jll v10.47.0+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [83775a58] Zlib_jll v1.3.2+0
  [3161d3a3] Zstd_jll v1.5.7+1
  [8e850b90] libblastrampoline_jll v5.15.0+0
  [8e850ede] nghttp2_jll v1.69.0+0
  [3f19e933] p7zip_jll v17.8.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
WARNING: Method definition eigencopy_oftype(LinearAlgebra.UpperHessenberg{T, S} where S<:AbstractArray{T, 2} where T, Any) in module LinearAlgebra at /source/usr/share/julia/stdlib/v1.14/LinearAlgebra/src/hessenberg.jl:448 overwritten in module GenericLinearAlgebra at /home/pkgeval/.julia/packages/GenericLinearAlgebra/WvuVM/src/eigenGeneral.jl:15.
ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation.
ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("14197337-ba66-59df-a3e3-ca00e7dcff7a"), "GenericLinearAlgebra") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0)
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:56
  [2] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2815
  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2669
  [4] macro expansion
    @ ./loading.jl:2596 [inlined]
  [5] String(s::Symbol)
    @ Base ./lock.jl:376 [inlined]
  [6] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2560
  [7] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2536 [inlined]
  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)
    @ Base ./module.jl:36 [inlined]
  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [10] _eval_using(to::Module, path::Expr, flags::UInt8)
    @ Base ./module.jl:137 [inlined]
 [11] top-level scope
    @ ~/.julia/packages/Hypatia/q5kAT/src/Hypatia.jl:18
 [12] include(mod::Module, _path::String)
    @ Base ./Base.jl:326
 [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3268
 [14] top-level scope
    @ stdin:5
 [15] eval(m::Module, e::Any)
    @ Core ./boot.jl:517
 [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:3110
 [17] materialize(bc::Base.Broadcast.Broadcasted{Base.Broadcast.DefaultArrayStyle{1}, Nothing, Type{Symbol}, Tuple{Vector{SubString{String}}}})
    @ Base.Broadcast ./loading.jl:3120 [inlined]
 [18] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:350
 [19] _start()
    @ Base ./client.jl:593
in expression starting at /home/pkgeval/.julia/packages/Hypatia/q5kAT/src/Hypatia.jl:8
in expression starting at stdin:5
  2 dependencies had output during precompilation:
┌ GenericLinearAlgebra
│  WARNING: Method definition eigencopy_oftype(LinearAlgebra.UpperHessenberg{T, S} where S<:AbstractArray{T, 2} where T, Any) in module LinearAlgebra at /source/usr/share/julia/stdlib/v1.14/LinearAlgebra/src/hessenberg.jl:448 overwritten in module GenericLinearAlgebra at /home/pkgeval/.julia/packages/GenericLinearAlgebra/WvuVM/src/eigenGeneral.jl:15.
│  ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation.
└  
┌ Hypatia
│  [Output was shown above]
└  
ERROR: LoadError: The following 1 package failed to precompile:

Hypatia 
Failed to precompile Hypatia [b99e6be6-89ff-11e8-14f8-45c827f4f8f2] to "/home/pkgeval/.julia/compiled/v1.14/Hypatia/jl_Uh94zg" (ProcessExited(1)).

in expression starting at /home/pkgeval/.julia/packages/Pajarito/gSNvz/test/runtests.jl:8

Testing failed after 41.45s

ERROR: LoadError: Package Pajarito errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3162
  [3] Cmd(cmd::Cmd)
    @ Base /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3025 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:586
  [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172
  [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160
  [7] test
    @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined]
  [8] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined]
  [9] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:223
 [10] include(mod::Module, _path::String)
    @ Base ./Base.jl:326
 [11] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:352
 [12] _start()
    @ Base ./client.jl:593
in expression starting at /PkgEval.jl/scripts/evaluate.jl:214

PkgEval failed after 162.93s: illegal method overwrites during precompilation