Package evaluation to test MomentClosure on Julia 1.14.0-DEV.2064 (1d5dcac2d2*) started at 2026-04-22T01:30:15.081 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 14.37s ################################################################################ # Installation # Installing MomentClosure... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [01a1b25a] + MomentClosure v0.4.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [47edcb42] + ADTypes v1.21.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.44 [79e6a3ab] + Adapt v4.5.2 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.24.0 [4c555306] + ArrayLayouts v1.12.2 [e2ed5e7c] + Bijections v0.2.2 [8e7c35d0] + BlockArrays v1.9.3 [70df07ce] + BracketingNonlinearSolve v1.12.1 ⌅ [479239e8] + Catalyst v15.0.11 [d360d2e6] + ChainRulesCore v1.26.1 ⌅ [861a8166] + Combinatorics v1.0.2 ⌅ [a80b9123] + CommonMark v0.10.3 [38540f10] + CommonSolve v0.2.6 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [b152e2b5] + CompositeTypes v0.1.4 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [187b0558] + ConstructionBase v1.6.0 [01e79fc4] + Cumulants v1.0.6 [9a962f9c] + DataAPI v1.16.0 ⌅ [864edb3b] + DataStructures v0.18.22 ⌃ [2b5f629d] + DiffEqBase v6.214.1 [459566f4] + DiffEqCallbacks v4.15.0 [77a26b50] + DiffEqNoiseProcess v5.29.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.16 [8d63f2c5] + DispatchDoctor v0.4.28 [31c24e10] + Distributions v0.25.125 [ffbed154] + DocStringExtensions v0.9.5 ⌅ [5b8099bc] + DomainSets v0.7.18 ⌃ [7c1d4256] + DynamicPolynomials v0.6.3 [06fc5a27] + DynamicQuantities v1.12.1 [4e289a0a] + EnumX v1.0.7 [f151be2c] + EnzymeCore v0.8.19 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [7034ab61] + FastBroadcast v1.3.1 [9aa1b823] + FastClosures v0.3.2 [a4df4552] + FastPower v1.3.1 [1a297f60] + FillArrays v1.16.0 [64ca27bc] + FindFirstFunctions v1.8.0 [6a86dc24] + FiniteDiff v2.30.0 [1fa38f19] + Format v1.3.7 [f6369f11] + ForwardDiff v1.3.3 [a85aefff] + FunctionMaps v0.1.2 [069b7b12] + FunctionWrappers v1.1.3 ⌅ [77dc65aa] + FunctionWrappersWrappers v0.1.3 [46192b85] + GPUArraysCore v0.2.0 [c27321d9] + Glob v1.4.0 ⌃ [86223c79] + Graphs v1.13.1 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [d25df0c9] + Inflate v0.1.5 [18e54dd8] + IntegerMathUtils v0.1.3 [8197267c] + IntervalSets v0.7.14 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [ae98c720] + Jieko v0.2.1 [98e50ef6] + JuliaFormatter v2.3.0 ⌅ [70703baa] + JuliaSyntax v0.4.10 [ccbc3e58] + JumpProcesses v9.25.1 [ba0b0d4f] + Krylov v0.10.6 [b964fa9f] + LaTeXStrings v1.4.0 [23fbe1c1] + Latexify v0.16.10 [87fe0de2] + LineSearch v0.1.8 [7ed4a6bd] + LinearSolve v3.75.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [d8e11817] + MLStyle v0.4.17 [1914dd2f] + MacroTools v0.5.16 [bb5d69b7] + MaybeInplace v0.1.4 [e1d29d7a] + Missings v1.2.0 ⌅ [961ee093] + ModelingToolkit v9.84.0 [01a1b25a] + MomentClosure v0.4.0 [2e0e35c7] + Moshi v0.3.7 [46d2c3a1] + 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v1.13.0 ⌅ [0bca4576] + SciMLBase v2.153.1 [19f34311] + SciMLJacobianOperators v0.1.13 [a6db7da4] + SciMLLogging v1.9.1 [c0aeaf25] + SciMLOperators v1.16.0 [431bcebd] + SciMLPublic v1.0.1 [53ae85a6] + SciMLStructures v1.10.0 [efcf1570] + Setfield v1.1.2 ⌃ [727e6d20] + SimpleNonlinearSolve v2.11.0 [699a6c99] + SimpleTraits v0.9.5 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.7.2 [aedffcd0] + Static v1.3.1 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [2efcf032] + SymbolicIndexingInterface v0.3.46 ⌅ [19f23fe9] + SymbolicLimits v0.2.3 ⌅ [d1185830] + SymbolicUtils v3.32.0 ⌅ [0c5d862f] + Symbolics v6.58.0 [1ab33d94] + SymmetricTensors v1.0.7 [ed4db957] + TaskLocalValues v0.1.3 [8ea1fca8] + TermInterface v2.0.0 [1c621080] + TestItems v1.0.0 [a759f4b9] + TimerOutputs v0.5.29 [410a4b4d] + Tricks v0.1.13 [781d530d] + TruncatedStacktraces v1.4.0 [9d95972d] + TupleTools v1.6.0 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [1986cc42] + Unitful v1.28.0 [a7c27f48] + Unityper v0.1.6 [61579ee1] + Ghostscript_jll v9.55.1+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [aacddb02] + JpegTurbo_jll v3.1.5+0 [856f044c] + MKL_jll v2025.2.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.19.0+0 [e37daf67] + LibGit2_jll v1.9.2+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2026.3.19 [4536629a] + OpenBLAS_jll v0.3.30+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.6+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.69.0+0 [3f19e933] + p7zip_jll v17.8.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 7.61s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/RUPmD/src/julia-1.13/activate_set.jl:78 Precompiling package dependencies... Precompiling project... WARNING: Constructor for type "Array" was extended in `SymmetricTensors` without explicit qualification or import.  NOTE: Assumed "Array" refers to `Base.Array`. This behavior is deprecated and may differ in future versions.  NOTE: This behavior may have differed in Julia versions prior to 1.12.  Hint: If you intended to create a new generic function of the same name, use `function Array end`.  Hint: To silence the warning, qualify `Array` as `Base.Array` in the method signature or explicitly `import Base: Array`. 4.5 s ✓ SymmetricTensors WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqRODEAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. ERROR: LoadError: UndefVarError: `StochasticDiffEqAlgorithm` not defined in `JumpProcessesOrdinaryDiffEqCoreExt` Suggestion: this global was defined as `OrdinaryDiffEqCore.StochasticDiffEqAlgorithm` but not assigned a value. Stacktrace:  [1] top-level scope  @ ~/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:17  [2] include(mod::Module, _path::String)  @ Base ./Base.jl:326  [3] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3268  [4] top-level scope  @ stdin:5  [5] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [6] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3110  [7] materialize(bc::Base.Broadcast.Broadcasted{Base.Broadcast.DefaultArrayStyle{1}, Nothing, Type{Symbol}, Tuple{Vector{SubString{String}}}})  @ Base.Broadcast ./loading.jl:3120 [inlined]  [8] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:350  [9] _start()  @ Base ./client.jl:593 in expression starting at /home/pkgeval/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:1 in expression starting at stdin:5 ✗ JumpProcesses → JumpProcessesOrdinaryDiffEqCoreExt 6.6 s ✓ SciMLBase → SciMLBaseDistributionsExt 5.6 s ✓ Cumulants 64.3 s ✓ Symbolics 10.4 s ✓ DiffEqNoiseProcess 15.2 s ✓ Symbolics → SymbolicsForwardDiffExt 14.2 s ✓ DifferentiationInterface → DifferentiationInterfaceSymbolicsExt 14.0 s ✓ Symbolics → SymbolicsPreallocationToolsExt 308.2 s ✓ ModelingToolkit 87.5 s ✓ Catalyst 69.3 s ✓ MomentClosure 11 dependencies successfully precompiled in 615 seconds. 304 already precompiled. 1 dependency had output during precompilation: ┌ SymmetricTensors │ WARNING: Constructor for type "Array" was extended in `SymmetricTensors` without explicit qualification or import. │ NOTE: Assumed "Array" refers to `Base.Array`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Array end`. │ Hint: To silence the warning, qualify `Array` as `Base.Array` in the method signature or explicitly `import Base: Array`. └ Precompilation completed after 638.47s ################################################################################ # Testing # Testing MomentClosure Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_efN1ej/Project.toml` [01a1b25a] + MomentClosure v0.4.0 ⌃ [b1df2697] + OrdinaryDiffEqTsit5 v1.10.0 [1bc83da4] + SafeTestsets v0.1.0 Updating `/tmp/jl_efN1ej/Manifest.toml` [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [2a0fbf3d] + CPUSummary v0.2.7 [fb6a15b2] + CloseOpenIntervals v0.1.13 [adafc99b] + CpuId v0.3.1 ⌃ [2b5f629d] ↓ DiffEqBase v6.214.1 ⇒ v6.213.0 ⌅ [7034ab61] ↓ FastBroadcast v1.3.1 ⇒ v0.3.5 [10f19ff3] + LayoutPointers v0.1.17 [d125e4d3] + ManualMemory v0.1.8 [01a1b25a] + MomentClosure v0.4.0 ⌃ [bbf590c4] + OrdinaryDiffEqCore v3.1.0 ⌃ [b1df2697] + OrdinaryDiffEqTsit5 v1.10.0 [f517fe37] + Polyester v0.7.19 [1d0040c9] + PolyesterWeave v0.2.2 ⌅ [731186ca] ↓ RecursiveArrayTools v3.54.0 ⇒ v3.50.0 [94e857df] + SIMDTypes v0.1.0 [1bc83da4] + SafeTestsets v0.1.0 [0d7ed370] + StaticArrayInterface v1.9.0 [7792a7ef] + StrideArraysCore v0.5.8 [8290d209] + ThreadingUtilities v0.5.5 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_efN1ej/Project.toml` ⌅ [479239e8] Catalyst v15.0.11 ⌅ [861a8166] Combinatorics v1.0.2 [01e79fc4] Cumulants v1.0.6 ⌅ [864edb3b] DataStructures v0.18.22 [31c24e10] Distributions v0.25.125 [ffbed154] DocStringExtensions v0.9.5 [ccbc3e58] JumpProcesses v9.25.1 [23fbe1c1] Latexify v0.16.10 ⌅ [961ee093] ModelingToolkit v9.84.0 [01a1b25a] MomentClosure v0.4.0 ⌃ [b1df2697] OrdinaryDiffEqTsit5 v1.10.0 [1bc83da4] SafeTestsets v0.1.0 ⌅ [0bca4576] SciMLBase v2.153.1 ⌅ [d1185830] SymbolicUtils v3.32.0 ⌅ [0c5d862f] Symbolics v6.58.0 [9d95972d] TupleTools v1.6.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_efN1ej/Manifest.toml` [47edcb42] ADTypes v1.21.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.44 [79e6a3ab] Adapt v4.5.2 [66dad0bd] AliasTables v1.1.3 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.24.0 [4c555306] ArrayLayouts v1.12.2 [e2ed5e7c] Bijections v0.2.2 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [8e7c35d0] BlockArrays v1.9.3 [70df07ce] BracketingNonlinearSolve v1.12.1 [2a0fbf3d] CPUSummary v0.2.7 ⌅ [479239e8] Catalyst v15.0.11 [d360d2e6] ChainRulesCore v1.26.1 [fb6a15b2] CloseOpenIntervals v0.1.13 ⌅ [861a8166] Combinatorics v1.0.2 ⌅ [a80b9123] CommonMark v0.10.3 [38540f10] CommonSolve v0.2.6 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [b152e2b5] CompositeTypes v0.1.4 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [187b0558] ConstructionBase v1.6.0 [adafc99b] CpuId v0.3.1 [01e79fc4] Cumulants v1.0.6 [9a962f9c] DataAPI v1.16.0 ⌅ [864edb3b] DataStructures v0.18.22 ⌃ [2b5f629d] DiffEqBase v6.213.0 [459566f4] DiffEqCallbacks v4.15.0 [77a26b50] DiffEqNoiseProcess v5.29.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.16 [8d63f2c5] DispatchDoctor v0.4.28 [31c24e10] Distributions v0.25.125 [ffbed154] DocStringExtensions v0.9.5 ⌅ [5b8099bc] DomainSets v0.7.18 ⌃ [7c1d4256] DynamicPolynomials v0.6.3 [06fc5a27] DynamicQuantities v1.12.1 [4e289a0a] EnumX v1.0.7 [f151be2c] EnzymeCore v0.8.19 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 ⌅ [7034ab61] FastBroadcast v0.3.5 [9aa1b823] FastClosures v0.3.2 [a4df4552] FastPower v1.3.1 [1a297f60] FillArrays v1.16.0 [64ca27bc] FindFirstFunctions v1.8.0 [6a86dc24] FiniteDiff v2.30.0 [1fa38f19] Format v1.3.7 [f6369f11] ForwardDiff v1.3.3 [a85aefff] FunctionMaps v0.1.2 [069b7b12] FunctionWrappers v1.1.3 ⌅ [77dc65aa] FunctionWrappersWrappers v0.1.3 [46192b85] GPUArraysCore v0.2.0 [c27321d9] Glob v1.4.0 ⌃ [86223c79] Graphs v1.13.1 [34004b35] HypergeometricFunctions v0.3.28 [615f187c] IfElse v0.1.1 [d25df0c9] Inflate v0.1.5 [18e54dd8] IntegerMathUtils v0.1.3 [8197267c] IntervalSets v0.7.14 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [ae98c720] Jieko v0.2.1 [98e50ef6] JuliaFormatter v2.3.0 ⌅ [70703baa] JuliaSyntax v0.4.10 [ccbc3e58] JumpProcesses v9.25.1 [ba0b0d4f] Krylov v0.10.6 [b964fa9f] LaTeXStrings v1.4.0 [23fbe1c1] Latexify v0.16.10 [10f19ff3] LayoutPointers v0.1.17 [87fe0de2] LineSearch v0.1.8 [7ed4a6bd] LinearSolve v3.75.0 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 [d8e11817] MLStyle v0.4.17 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [bb5d69b7] MaybeInplace v0.1.4 [e1d29d7a] Missings v1.2.0 ⌅ [961ee093] ModelingToolkit v9.84.0 [01a1b25a] MomentClosure v0.4.0 [2e0e35c7] Moshi v0.3.7 [46d2c3a1] MuladdMacro v0.2.4 ⌃ [102ac46a] MultivariatePolynomials v0.5.9 [d8a4904e] MutableArithmetics v1.7.1 [77ba4419] NaNMath v1.1.3 ⌃ [8913a72c] NonlinearSolve v4.16.0 ⌃ [be0214bd] NonlinearSolveBase v2.11.2 ⌃ [5959db7a] NonlinearSolveFirstOrder v2.0.0 ⌃ [9a2c21bd] NonlinearSolveQuasiNewton v1.12.0 ⌃ [26075421] NonlinearSolveSpectralMethods v1.6.0 [6fe1bfb0] 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[efcf1570] Setfield v1.1.2 ⌃ [727e6d20] SimpleNonlinearSolve v2.11.0 [699a6c99] SimpleTraits v0.9.5 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.7.2 [aedffcd0] Static v1.3.1 [0d7ed370] StaticArrayInterface v1.9.0 [90137ffa] StaticArrays v1.9.18 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.10 [4c63d2b9] StatsFuns v1.5.2 [7792a7ef] StrideArraysCore v0.5.8 [2efcf032] SymbolicIndexingInterface v0.3.46 ⌅ [19f23fe9] SymbolicLimits v0.2.3 ⌅ [d1185830] SymbolicUtils v3.32.0 ⌅ [0c5d862f] Symbolics v6.58.0 [1ab33d94] SymmetricTensors v1.0.7 [ed4db957] TaskLocalValues v0.1.3 [8ea1fca8] TermInterface v2.0.0 [1c621080] TestItems v1.0.0 [8290d209] ThreadingUtilities v0.5.5 [a759f4b9] TimerOutputs v0.5.29 [410a4b4d] Tricks v0.1.13 [781d530d] TruncatedStacktraces v1.4.0 [9d95972d] TupleTools v1.6.0 [5c2747f8] URIs v1.6.1 [3a884ed6] UnPack v1.0.2 [1986cc42] Unitful v1.28.0 [a7c27f48] Unityper v0.1.6 [61579ee1] Ghostscript_jll v9.55.1+0 [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0 [aacddb02] JpegTurbo_jll v3.1.5+0 [856f044c] MKL_jll v2025.2.0+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [1317d2d5] oneTBB_jll v2022.0.0+1 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.19.0+0 [e37daf67] LibGit2_jll v1.9.2+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2026.3.19 [4536629a] OpenBLAS_jll v0.3.30+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.6+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.69.0+0 [3f19e933] p7zip_jll v17.8.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Test Summary: | Pass Total Time basic symbolics | 9 9 1m51.4s Test Summary: | Pass Total Time moment conversion | 8 8 27.4s Test Summary: | Pass Total Time reaction systems | 2 2 2m50.2s WARNING: Constructor for type "Geometric" was extended in `##moment eqs#181` without explicit qualification or import. NOTE: Assumed "Geometric" refers to `Distributions.Geometric`. This behavior is deprecated and may differ in future versions. NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Geometric end`. Hint: To silence the warning, qualify `Geometric` as `Distributions.Geometric` in the method signature or explicitly `import Distributions: Geometric`. Test Summary: | Pass Total Time moment eqs | 25 25 2m47.3s Test Summary: | Pass Total Time moment closure | 19 19 10m21.5s WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqRODEAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. ERROR: LoadError: UndefVarError: `StochasticDiffEqAlgorithm` not defined in `JumpProcessesOrdinaryDiffEqCoreExt` Suggestion: this global was defined as `OrdinaryDiffEqCore.StochasticDiffEqAlgorithm` but not assigned a value. Stacktrace: [1] top-level scope @ ~/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:17 [2] include(mod::Module, _path::String) @ Base ./Base.jl:326 [3] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3268 [4] top-level scope @ stdin:5 [5] eval(m::Module, e::Any) @ Core ./boot.jl:517 [6] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:3110 [7] materialize(bc::Base.Broadcast.Broadcasted{Base.Broadcast.DefaultArrayStyle{1}, Nothing, Type{Symbol}, Tuple{Vector{SubString{String}}}}) @ Base.Broadcast ./loading.jl:3120 [inlined] [8] exec_options(opts::Base.JLOptions) @ Base ./client.jl:350 [9] _start() @ Base ./client.jl:593 in expression starting at /home/pkgeval/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:1 in expression starting at stdin:5 ┌ Error: Error during loading of extension JumpProcessesOrdinaryDiffEqCoreExt of JumpProcesses, use `Base.retry_load_extensions()` to retry. │ exception = │ 1-element ExceptionStack: │ Failed to precompile JumpProcessesOrdinaryDiffEqCoreExt [004f8eba-9623-5d64-8581-88f9ad4dca18] to "/home/pkgeval/.julia/compiled/v1.14/JumpProcessesOrdinaryDiffEqCoreExt/jl_96yvdJ" (ProcessExited(1)). │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:56 │ [2] compilecache(pkg::Base.PkgId, spec::Base.PkgLoadSpec, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, loadable_exts::Vector{Base.PkgId}, signal_channel::Nothing, pid_channel::Nothing) │ @ Base ./loading.jl:3588 │ [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, Base.PkgLoadSpec, Dict{String, Int64}, Base.RefValue{Bool}})() │ @ Base ./loading.jl:2879 │ [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, Base.PkgLoadSpec, Dict{String, Int64}, Base.RefValue{Bool}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) │ @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.14/FileWatching/src/pidfile.jl:97 │ [5] #mkpidlock#7 │ @ /opt/julia/share/julia/stdlib/v1.14/FileWatching/src/pidfile.jl:92 [inlined] │ [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) │ @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.14/FileWatching/src/pidfile.jl:118 │ [7] #invokelatest_gr#230 │ @ ./reflection.jl:1374 [inlined] │ [8] invokelatest_gr │ @ ./reflection.jl:1366 [inlined] │ [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, Base.PkgLoadSpec, Dict{String, Int64}, Base.RefValue{Bool}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) │ @ Base ./loading.jl:4158 │ [10] maybe_cachefile_lock │ @ ./loading.jl:4155 [inlined] │ [11] __require_prelocked(pkg::Base.PkgId, env::Nothing) │ @ Base ./loading.jl:2840 │ [12] _require_prelocked(uuidkey::Base.PkgId, env::Nothing) │ @ Base ./loading.jl:2669 │ [13] assert_havelock(l::ReentrantLock) │ @ Base ./loading.jl:2663 [inlined] │ [14] run_extension_callbacks(extid::Base.ExtensionId) │ @ Base ./loading.jl:1769 │ [15] run_extension_callbacks(pkgid::Base.PkgId) │ @ Base ./loading.jl:1806 │ [16] run_package_callbacks(modkey::Base.PkgId) │ @ Base ./loading.jl:1622 │ [17] _require_search_from_serialized(pkg::Base.PkgId, sourcespec::Base.PkgLoadSpec, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) │ @ Base ./loading.jl:2298 │ [18] !=(x::Int8, y::Int64) │ @ Base ./loading.jl:2175 [inlined] │ [19] __require_prelocked(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2808 │ [20] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2669 │ [21] macro expansion │ @ ./loading.jl:2596 [inlined] │ [22] String(s::Symbol) │ @ Base ./lock.jl:376 [inlined] │ [23] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2560 │ [24] require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2536 [inlined] │ [25] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String) │ @ Base ./module.jl:36 [inlined] │ [26] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [27] _eval_using(to::Module, path::Expr, flags::UInt8) │ @ Base ./module.jl:137 [inlined] │ [28] top-level scope │ @ ~/.julia/packages/MomentClosure/XK5kW/test/moment_ODE_tests.jl:4 │ [29] include(mapexpr::Function, mod::Module, _path::String) │ @ Base ./Base.jl:327 │ [30] top-level scope │ @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:8 │ [31] macro expansion │ @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] │ [32] macro expansion │ @ ~/.julia/packages/MomentClosure/XK5kW/test/runtests.jl:8 [inlined] │ [33] eval(m::Module, e::Any) │ @ Core ./boot.jl:517 │ [34] top-level scope │ @ ~/.julia/packages/MomentClosure/XK5kW/test/runtests.jl:28 │ [35] include(mapexpr::Function, mod::Module, _path::String) │ @ Base ./Base.jl:327 │ [36] top-level scope │ @ none:6 │ [37] eval(m::Module, e::Any) │ @ Core ./boot.jl:517 │ [38] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:318 │ [39] _start() │ @ Base ./client.jl:593 └ @ Base loading.jl:1779 Test Summary: | Pass Total Time moment ODEs | 4 4 3m56.3s WARNING: Method definition (::Type{Distributions.Geometric{T} where T<:Real})(SymbolicUtils.Symbolic{var"#s440"} where var"#s440"<:Real) in module ##moment eqs#181 at /home/pkgeval/.julia/packages/Symbolics/T2Tbs/src/wrapper-types.jl:168 overwritten in module ##moment closure (bernoulli)#559 on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{Distributions.Geometric{T} where T<:Real})(Symbolics.Num) in module ##moment eqs#181 at /home/pkgeval/.julia/packages/Symbolics/T2Tbs/src/wrapper-types.jl:168 overwritten in module ##moment closure (bernoulli)#559 on the same line (check for duplicate calls to `include`). WARNING: Method definition promote_symtype(UnionAll, Any...) in module ##moment eqs#181 at /home/pkgeval/.julia/packages/Symbolics/T2Tbs/src/register.jl:48 overwritten in module ##moment closure (bernoulli)#559 on the same line (check for duplicate calls to `include`). Test Summary: | Pass Total Time moment closure (bernoulli) | 12 12 45.5s WARNING: Method definition (::Type{Distributions.Geometric{T} where T<:Real})(SymbolicUtils.Symbolic{var"#s440"} where var"#s440"<:Real) in module ##moment closure (bernoulli)#559 at /home/pkgeval/.julia/packages/Symbolics/T2Tbs/src/wrapper-types.jl:168 overwritten in module ##conditional closure#746 on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{Distributions.Geometric{T} where T<:Real})(Symbolics.Num) in module ##moment closure (bernoulli)#559 at /home/pkgeval/.julia/packages/Symbolics/T2Tbs/src/wrapper-types.jl:168 overwritten in module ##conditional closure#746 on the same line (check for duplicate calls to `include`). WARNING: Method definition promote_symtype(UnionAll, Any...) in module ##moment closure (bernoulli)#559 at /home/pkgeval/.julia/packages/Symbolics/T2Tbs/src/register.jl:48 overwritten in module ##conditional closure#746 on the same line (check for duplicate calls to `include`). Test Summary: | Pass Total Time conditional closure | 15 15 2m00.3s Test Summary: | Pass Total Time sample moments | 9 9 31.6s Test Summary: | Pass Total Time linear mapping approximation | 4 4 15.7s Test Summary: | Pass Total Time moment eqs for SDEs | 22 22 43.0s WARNING: Method definition (::Type{Distributions.Geometric{T} where T<:Real})(SymbolicUtils.Symbolic{var"#s440"} where var"#s440"<:Real) in module ##conditional closure#746 at /home/pkgeval/.julia/packages/Symbolics/T2Tbs/src/wrapper-types.jl:168 overwritten in module ##latexify#1078 on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{Distributions.Geometric{T} where T<:Real})(Symbolics.Num) in module ##conditional closure#746 at /home/pkgeval/.julia/packages/Symbolics/T2Tbs/src/wrapper-types.jl:168 overwritten in module ##latexify#1078 on the same line (check for duplicate calls to `include`). WARNING: Method definition promote_symtype(UnionAll, Any...) in module ##conditional closure#746 at /home/pkgeval/.julia/packages/Symbolics/T2Tbs/src/register.jl:48 overwritten in module ##latexify#1078 on the same line (check for duplicate calls to `include`). Test Summary: | Pass Total Time latexify | 3 3 17.6s Testing MomentClosure tests passed Testing completed after 1619.13s PkgEval succeeded after 2306.41s