Package evaluation to test SBMLToolkit on Julia 1.14.0-DEV.2043 (b936235316*) started at 2026-04-17T04:53:48.680 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 13.44s ################################################################################ # Installation # Installing SBMLToolkit... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [86080e66] + SBMLToolkit v0.1.31 Updating `~/.julia/environments/v1.14/Manifest.toml` [47edcb42] + ADTypes v1.21.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.44 [79e6a3ab] + Adapt v4.5.2 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.24.0 [4c555306] + ArrayLayouts v1.12.2 [e2ed5e7c] + Bijections v0.2.2 [8e7c35d0] + BlockArrays v1.9.3 [70df07ce] + BracketingNonlinearSolve v1.12.1 ⌅ [479239e8] + Catalyst v15.0.11 [d360d2e6] + ChainRulesCore v1.26.1 ⌅ [861a8166] + Combinatorics v1.0.2 ⌅ [a80b9123] + CommonMark v0.10.3 [38540f10] + CommonSolve v0.2.6 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [b152e2b5] + CompositeTypes v0.1.4 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 ⌅ [864edb3b] + DataStructures v0.18.22 ⌃ [2b5f629d] + DiffEqBase v6.214.1 [459566f4] + DiffEqCallbacks v4.14.0 [77a26b50] + DiffEqNoiseProcess v5.29.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.16 [8d63f2c5] + DispatchDoctor v0.4.28 [31c24e10] + Distributions v0.25.124 [ffbed154] + DocStringExtensions v0.9.5 ⌅ [5b8099bc] + DomainSets v0.7.18 ⌃ [7c1d4256] + DynamicPolynomials v0.6.3 [06fc5a27] + DynamicQuantities v1.12.1 [4e289a0a] + EnumX v1.0.7 [f151be2c] + EnzymeCore v0.8.19 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [7034ab61] + FastBroadcast v1.3.1 [9aa1b823] + FastClosures v0.3.2 [a4df4552] + FastPower v1.3.1 [1a297f60] + FillArrays v1.16.0 [64ca27bc] + FindFirstFunctions v1.8.0 [6a86dc24] + FiniteDiff v2.30.0 [1fa38f19] + Format v1.3.7 [f6369f11] + ForwardDiff v1.3.3 [a85aefff] + FunctionMaps v0.1.2 [069b7b12] + FunctionWrappers v1.1.3 ⌅ [77dc65aa] + FunctionWrappersWrappers v0.1.3 [46192b85] + GPUArraysCore v0.2.0 [c27321d9] + Glob v1.4.0 ⌃ [86223c79] + Graphs v1.13.1 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [d25df0c9] + Inflate v0.1.5 [18e54dd8] + IntegerMathUtils v0.1.3 [8197267c] + IntervalSets v0.7.14 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [ae98c720] + Jieko v0.2.1 [98e50ef6] + JuliaFormatter v2.3.0 ⌅ [70703baa] + JuliaSyntax v0.4.10 [ccbc3e58] + JumpProcesses v9.25.1 [ba0b0d4f] + Krylov v0.10.6 [b964fa9f] + LaTeXStrings v1.4.0 [23fbe1c1] + Latexify v0.16.10 [87fe0de2] + LineSearch v0.1.7 [7ed4a6bd] + LinearSolve v3.75.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [d8e11817] + MLStyle v0.4.17 [1914dd2f] + MacroTools v0.5.16 [bb5d69b7] + MaybeInplace v0.1.4 [e1d29d7a] + Missings v1.2.0 ⌅ [961ee093] + ModelingToolkit v9.84.0 [2e0e35c7] + Moshi v0.3.7 [46d2c3a1] + MuladdMacro v0.2.4 ⌃ [102ac46a] + MultivariatePolynomials v0.5.9 [d8a4904e] + MutableArithmetics v1.7.1 [77ba4419] + NaNMath v1.1.3 ⌃ [8913a72c] + NonlinearSolve v4.16.0 ⌃ [be0214bd] + NonlinearSolveBase v2.11.2 ⌃ [5959db7a] + NonlinearSolveFirstOrder v2.0.0 ⌃ [9a2c21bd] + NonlinearSolveQuasiNewton v1.12.0 ⌃ [26075421] + NonlinearSolveSpectralMethods v1.6.0 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 [d96e819e] + Parameters v0.12.3 [e409e4f3] + PoissonRandom v0.4.7 ⌃ [d236fae5] + PreallocationTools v0.4.34 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.2 [27ebfcd6] + Primes v0.5.7 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.3 [3cdcf5f2] + RecipesBase v1.3.4 ⌅ [731186ca] + RecursiveArrayTools v3.54.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [ae5879a3] + ResettableStacks v1.2.0 [79098fc4] + Rmath v0.9.0 [7e49a35a] + RuntimeGeneratedFunctions v0.5.18 [e5567a89] + SBML v1.6.0 [86080e66] + SBMLToolkit v0.1.31 [9dfe8606] + SCCNonlinearSolve v1.13.0 ⌅ [0bca4576] + SciMLBase v2.153.1 [19f34311] + SciMLJacobianOperators v0.1.13 [a6db7da4] + SciMLLogging v1.9.1 [c0aeaf25] + SciMLOperators v1.16.0 [431bcebd] + SciMLPublic v1.0.1 [53ae85a6] + SciMLStructures v1.10.0 [efcf1570] + Setfield v1.1.2 ⌃ [727e6d20] + SimpleNonlinearSolve v2.11.0 [699a6c99] + SimpleTraits v0.9.5 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.7.2 [aedffcd0] + Static v1.3.1 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [2efcf032] + SymbolicIndexingInterface v0.3.46 ⌅ [19f23fe9] + SymbolicLimits v0.2.3 ⌅ [d1185830] + SymbolicUtils v3.32.0 ⌅ [0c5d862f] + Symbolics v6.58.0 [ed4db957] + TaskLocalValues v0.1.3 [8ea1fca8] + TermInterface v2.0.0 [1c621080] + TestItems v1.0.0 [a759f4b9] + TimerOutputs v0.5.29 [410a4b4d] + Tricks v0.1.13 [781d530d] + TruncatedStacktraces v1.4.0 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [1986cc42] + Unitful v1.28.0 [a7c27f48] + Unityper v0.1.6 [61579ee1] + Ghostscript_jll v9.55.1+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [aacddb02] + JpegTurbo_jll v3.1.5+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] + MKL_jll v2025.2.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [bb12108a] + SBML_jll v5.21.0+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.19.0+0 [e37daf67] + LibGit2_jll v1.9.2+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2026.3.19 [4536629a] + OpenBLAS_jll v0.3.30+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.6+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.1+0 [3f19e933] + p7zip_jll v17.8.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 9.24s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/RUPmD/src/julia-1.13/activate_set.jl:78 Precompiling package dependencies... Precompiling project... 13.6 s ✓ OrdinaryDiffEqCore 21.6 s ✓ Sundials 9.9 s ✓ JumpProcesses 6.4 s ✓ OrdinaryDiffEqCore → OrdinaryDiffEqCoreEnzymeCoreExt 12.4 s ✓ NonlinearSolve → NonlinearSolveSundialsExt WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqRODEAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. ERROR: LoadError: UndefVarError: `StochasticDiffEqAlgorithm` not defined in `JumpProcessesOrdinaryDiffEqCoreExt` Suggestion: this global was defined as `OrdinaryDiffEqCore.StochasticDiffEqAlgorithm` but not assigned a value. Stacktrace:  [1] top-level scope  @ ~/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:17  [2] include(mod::Module, _path::String)  @ Base ./Base.jl:326  [3] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3265  [4] top-level scope  @ stdin:5  [5] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [6] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3107  [7] include_string  @ ./loading.jl:3117 [inlined]  [8] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:350  [9] _start()  @ Base ./client.jl:593 in expression starting at /home/pkgeval/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:1 in expression starting at stdin:5 ✗ JumpProcesses → JumpProcessesOrdinaryDiffEqCoreExt 308.4 s ✓ ModelingToolkit 9.2 s ✓ OrdinaryDiffEqStabilizedRK 7.2 s ✓ OrdinaryDiffEqFunctionMap 61.3 s ✓ OrdinaryDiffEqVerner 7.2 s ✓ OrdinaryDiffEqQPRK 8.6 s ✓ OrdinaryDiffEqSymplecticRK 12.0 s ✓ OrdinaryDiffEqLowOrderRK 9.1 s ✓ OrdinaryDiffEqFeagin 10.8 s ✓ OrdinaryDiffEqSSPRK 9.5 s ✓ OrdinaryDiffEqRKN 8.8 s ✓ OrdinaryDiffEqHighOrderRK 8.1 s ✓ OrdinaryDiffEqExplicitRK 16.5 s ✓ OrdinaryDiffEqTsit5 12.2 s ✓ OrdinaryDiffEqLinear 8.2 s ✓ OrdinaryDiffEqPRK 10.7 s ✓ OrdinaryDiffEqLowStorageRK 14.6 s ✓ OrdinaryDiffEqDifferentiation 86.6 s ✓ Catalyst 9.7 s ✓ OrdinaryDiffEqAdamsBashforthMoulton 7.8 s ✓ OrdinaryDiffEqNordsieck 9.5 s ✓ OrdinaryDiffEqDifferentiation → OrdinaryDiffEqDifferentiationSparseArraysExt 70.3 s ✓ SBMLToolkit 14.6 s ✓ OrdinaryDiffEqExtrapolation 46.3 s ✓ OrdinaryDiffEqRosenbrock 17.1 s ✓ OrdinaryDiffEqExponentialRK 16.5 s ✓ OrdinaryDiffEqNonlinearSolve 60.1 s ✓ OrdinaryDiffEqFIRK 14.9 s ✓ OrdinaryDiffEqIMEXMultistep 15.7 s ✓ OrdinaryDiffEqStabilizedIRK 17.1 s ✓ OrdinaryDiffEqPDIRK 18.4 s ✓ OrdinaryDiffEqSDIRK 35.4 s ✓ OrdinaryDiffEqBDF 79.2 s ✓ OrdinaryDiffEqDefault 27.9 s ✓ OrdinaryDiffEq ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("004f8eba-9623-5d64-8581-88f9ad4dca18"), "JumpProcessesOrdinaryDiffEqCoreExt") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::Nothing)  @ Base ./loading.jl:2812  [3] _require_prelocked(uuidkey::Base.PkgId, env::Nothing)  @ Base ./loading.jl:2666  [4] _require_prelocked  @ ./loading.jl:2660 [inlined]  [5] run_extension_callbacks(extid::Base.ExtensionId)  @ Base ./loading.jl:1766  [6] run_extension_callbacks(pkgid::Base.PkgId)  @ Base ./loading.jl:1803  [7] run_package_callbacks(modkey::Base.PkgId)  @ Base ./loading.jl:1619  [8] _require_search_from_serialized(pkg::Base.PkgId, sourcespec::Base.PkgLoadSpec, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String})  @ Base ./loading.jl:2295  [9] _require_search_from_serialized  @ ./loading.jl:2172 [inlined]  [10] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2805  [11] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2666  [12] macro expansion  @ ./loading.jl:2593 [inlined]  [13] macro expansion  @ ./lock.jl:376 [inlined]  [14] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2557  [15] require  @ ./loading.jl:2533 [inlined]  [16] eval_import_path  @ ./module.jl:36 [inlined]  [17] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [18] _eval_using  @ ./module.jl:137 [inlined]  [19] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [20] top-level scope  @ ~/.julia/packages/SBMLToolkitTestSuite/QDNw7/src/SBMLToolkitTestSuite.jl:4  [21] include(mod::Module, _path::String)  @ Base ./Base.jl:326  [22] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3265  [23] top-level scope  @ stdin:5  [24] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3107  [26] include_string  @ ./loading.jl:3117 [inlined]  [27] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:350  [28] _start()  @ Base ./client.jl:593 in expression starting at /home/pkgeval/.julia/packages/SBMLToolkitTestSuite/QDNw7/src/SBMLToolkitTestSuite.jl:1 in expression starting at stdin:5 ✗ SBMLToolkitTestSuite 39 dependencies successfully precompiled in 1244 seconds. 462 already precompiled. Precompilation completed after 1262.75s ################################################################################ # Testing # Testing SBMLToolkit Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_lLyH4H/Project.toml` [4c88cf16] + Aqua v0.8.14 [336ed68f] + CSV v0.10.16 [a93c6f00] + DataFrames v1.8.2 ⌃ [1dea7af3] + OrdinaryDiffEq v6.107.0 [91a5bcdd] + Plots v1.41.6 [86080e66] + SBMLToolkit v0.1.31 ⌅ [792e603a] + SBMLToolkitTestSuite v0.0.4 [1bc83da4] + SafeTestsets v0.1.0 ⌅ [c3572dad] + Sundials v4.28.0 Updating `/tmp/jl_lLyH4H/Manifest.toml` [4c88cf16] + Aqua v0.8.14 [d1d4a3ce] + BitFlags v0.1.9 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [fa961155] + CEnum v0.5.0 [2a0fbf3d] + CPUSummary v0.2.7 [336ed68f] + CSV v0.10.16 [fb6a15b2] + CloseOpenIntervals v0.1.13 [944b1d66] + CodecZlib v0.7.8 [35d6a980] + ColorSchemes v3.31.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [f0e56b4a] + ConcurrentUtilities v2.5.1 [d38c429a] + Contour v0.6.3 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [a93c6f00] + DataFrames v1.8.2 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 ⌃ [2b5f629d] ↓ DiffEqBase v6.214.1 ⇒ v6.213.0 [460bff9d] + ExceptionUnwrapping v0.1.11 [d4d017d3] + ExponentialUtilities v1.30.0 [c87230d0] + FFMPEG v0.4.5 ⌅ [7034ab61] ↓ FastBroadcast v1.3.1 ⇒ v0.3.5 [442a2c76] + FastGaussQuadrature v1.1.0 [48062228] + FilePathsBase v0.9.24 [53c48c17] + FixedPointNumbers v0.8.5 [28b8d3ca] + GR v0.73.24 [c145ed77] + GenericSchur v0.5.6 [42e2da0e] + Grisu v1.0.2 [cd3eb016] + HTTP v1.11.0 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [1019f520] + JLFzf v0.1.11 [682c06a0] + JSON v1.5.0 [10f19ff3] + LayoutPointers v0.1.17 [d3d80556] + LineSearches v7.6.1 [d125e4d3] + ManualMemory v0.1.8 [739be429] + MbedTLS v1.1.10 [442fdcdd] + Measures v0.3.3 [d41bc354] + NLSolversBase v8.0.0 [4d8831e6] + OpenSSL v1.6.1 ⌃ [1dea7af3] + OrdinaryDiffEq v6.107.0 ⌃ [89bda076] + OrdinaryDiffEqAdamsBashforthMoulton v1.10.0 ⌃ [6ad6398a] + OrdinaryDiffEqBDF v1.14.0 ⌃ [bbf590c4] + OrdinaryDiffEqCore v3.1.0 [50262376] + OrdinaryDiffEqDefault v1.14.0 ⌅ [4302a76b] + OrdinaryDiffEqDifferentiation v1.22.0 ⌃ [9286f039] + OrdinaryDiffEqExplicitRK v1.10.0 ⌃ [e0540318] + OrdinaryDiffEqExponentialRK v1.12.0 ⌃ [becaefa8] + OrdinaryDiffEqExtrapolation v1.13.0 ⌃ [5960d6e9] + OrdinaryDiffEqFIRK v1.20.0 ⌃ [101fe9f7] + OrdinaryDiffEqFeagin v1.9.0 ⌃ [d3585ca7] + OrdinaryDiffEqFunctionMap v1.10.0 ⌃ [d28bc4f8] + OrdinaryDiffEqHighOrderRK v1.10.0 ⌃ [9f002381] + OrdinaryDiffEqIMEXMultistep v1.11.0 ⌃ [521117fe] + OrdinaryDiffEqLinear v1.11.0 ⌃ [1344f307] + OrdinaryDiffEqLowOrderRK v1.10.0 ⌃ [b0944070] + OrdinaryDiffEqLowStorageRK v1.11.0 ⌃ [127b3ac7] + OrdinaryDiffEqNonlinearSolve v1.19.0 ⌃ [c9986a66] + OrdinaryDiffEqNordsieck v1.8.0 ⌃ [5dd0a6cf] + OrdinaryDiffEqPDIRK v1.10.0 ⌃ [5b33eab2] + OrdinaryDiffEqPRK v1.9.0 ⌃ [04162be5] + OrdinaryDiffEqQPRK v1.9.0 ⌃ [af6ede74] + OrdinaryDiffEqRKN v1.11.0 ⌃ [43230ef6] + OrdinaryDiffEqRosenbrock v1.22.0 ⌃ [2d112036] + OrdinaryDiffEqSDIRK v1.11.0 ⌃ [669c94d9] + OrdinaryDiffEqSSPRK v1.12.0 ⌃ [e3e12d00] + OrdinaryDiffEqStabilizedIRK v1.10.0 ⌃ [358294b1] + OrdinaryDiffEqStabilizedRK v1.9.0 ⌃ [fa646aed] + OrdinaryDiffEqSymplecticRK v1.12.0 ⌃ [b1df2697] + OrdinaryDiffEqTsit5 v1.10.0 ⌃ [79d7bb75] + OrdinaryDiffEqVerner v1.11.0 [69de0a69] + Parsers v2.8.3 [ccf2f8ad] + PlotThemes v3.3.0 [995b91a9] + PlotUtils v1.4.4 [91a5bcdd] + Plots v1.41.6 [f517fe37] + Polyester v0.7.19 [1d0040c9] + PolyesterWeave v0.2.2 [2dfb63ee] + PooledArrays v1.4.3 [08abe8d2] + PrettyTables v3.3.2 [01d81517] + RecipesPipeline v0.6.12 ⌅ [731186ca] ↓ RecursiveArrayTools v3.54.0 ⇒ v3.50.0 [05181044] + RelocatableFolders v1.0.1 [86080e66] + SBMLToolkit v0.1.31 ⌅ [792e603a] + SBMLToolkitTestSuite v0.0.4 [94e857df] + SIMDTypes v0.1.0 [1bc83da4] + SafeTestsets v0.1.0 [6c6a2e73] + Scratch v1.3.0 [91c51154] + SentinelArrays v1.4.9 [992d4aef] + Showoff v1.0.3 [777ac1f9] + SimpleBufferStream v1.2.0 [0a514795] + SparseMatrixColorings v0.4.27 [860ef19b] + StableRNGs v1.0.4 [0d7ed370] + StaticArrayInterface v1.9.0 [7792a7ef] + 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libfdk_aac_jll v2.0.4+0 [36db933b] + libinput_jll v1.28.1+0 [b53b4c65] + libpng_jll v1.6.57+0 [9a156e7d] + libva_jll v2.23.0+0 [f27f6e37] + libvorbis_jll v1.3.8+0 [009596ad] + mtdev_jll v1.1.7+0 ⌅ [1270edf5] + x264_jll v10164.0.1+0 [dfaa095f] + x265_jll v4.1.0+0 [d8fb68d0] + xkbcommon_jll v1.13.0+0 [3fa0cd96] + REPL v1.11.0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_lLyH4H/Project.toml` [4c88cf16] Aqua v0.8.14 [336ed68f] CSV v0.10.16 ⌅ [479239e8] Catalyst v15.0.11 [a93c6f00] DataFrames v1.8.2 ⌅ [961ee093] ModelingToolkit v9.84.0 ⌃ [1dea7af3] OrdinaryDiffEq v6.107.0 [91a5bcdd] Plots v1.41.6 [e5567a89] SBML v1.6.0 [86080e66] SBMLToolkit v0.1.31 ⌅ [792e603a] SBMLToolkitTestSuite v0.0.4 [1bc83da4] SafeTestsets v0.1.0 ⌅ [c3572dad] Sundials v4.28.0 ⌅ [d1185830] SymbolicUtils v3.32.0 [f43a241f] Downloads v1.7.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_lLyH4H/Manifest.toml` [47edcb42] ADTypes v1.21.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.44 [79e6a3ab] Adapt v4.5.2 [66dad0bd] AliasTables v1.1.3 [4c88cf16] Aqua v0.8.14 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.24.0 [4c555306] ArrayLayouts v1.12.2 [e2ed5e7c] Bijections v0.2.2 [d1d4a3ce] BitFlags v0.1.9 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [8e7c35d0] BlockArrays v1.9.3 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OrdinaryDiffEqSSPRK v1.12.0 ⌃ [e3e12d00] OrdinaryDiffEqStabilizedIRK v1.10.0 ⌃ [358294b1] OrdinaryDiffEqStabilizedRK v1.9.0 ⌃ [fa646aed] OrdinaryDiffEqSymplecticRK v1.12.0 ⌃ [b1df2697] OrdinaryDiffEqTsit5 v1.10.0 ⌃ [79d7bb75] OrdinaryDiffEqVerner v1.11.0 [90014a1f] PDMats v0.11.37 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [ccf2f8ad] PlotThemes v3.3.0 [995b91a9] PlotUtils v1.4.4 [91a5bcdd] Plots v1.41.6 [e409e4f3] PoissonRandom v0.4.7 [f517fe37] Polyester v0.7.19 [1d0040c9] PolyesterWeave v0.2.2 [2dfb63ee] PooledArrays v1.4.3 ⌃ [d236fae5] PreallocationTools v0.4.34 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.2 [08abe8d2] PrettyTables v3.3.2 [27ebfcd6] Primes v0.5.7 [43287f4e] PtrArrays v1.4.0 [1fd47b50] QuadGK v2.11.3 [3cdcf5f2] RecipesBase v1.3.4 [01d81517] RecipesPipeline v0.6.12 ⌅ [731186ca] RecursiveArrayTools v3.50.0 [189a3867] Reexport v1.2.2 [05181044] RelocatableFolders v1.0.1 [ae029012] Requires v1.3.1 [ae5879a3] ResettableStacks v1.2.0 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Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... ┌ Warning: `istree` is deprecated, use `iscall` instead. │ caller = (::SBMLToolkit.var"#check_args#get_massaction##0")(x::SymbolicUtils.BasicSymbolic{Real}) at reactions.jl:166 └ @ Core ~/.julia/packages/SBMLToolkit/7Hd7h/src/reactions.jl:166 ┌ Warning: Cannot separate bidirectional kineticLaw `k1 - s1s2(t) - k1*s2(t)` to forward and reverse part. Setting forward to `k1 - s1s2(t) - k1*s2(t)` and reverse to `0`. Stochastic simulations will be inexact. └ @ SBMLToolkit ~/.julia/packages/SBMLToolkit/7Hd7h/src/reactions.jl:49 ┌ Warning: Cannot separate bidirectional kineticLaw `k1` to forward and reverse part. Setting forward to `k1` and reverse to `0`. Stochastic simulations will be inexact. └ @ SBMLToolkit ~/.julia/packages/SBMLToolkit/7Hd7h/src/reactions.jl:35 WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqRODEAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. ERROR: LoadError: UndefVarError: `StochasticDiffEqAlgorithm` not defined in `JumpProcessesOrdinaryDiffEqCoreExt` Suggestion: this global was defined as `OrdinaryDiffEqCore.StochasticDiffEqAlgorithm` but not assigned a value. Stacktrace:  [1] top-level scope  @ ~/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:17  [2] include(mod::Module, _path::String)  @ Base ./Base.jl:326  [3] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3265  [4] top-level scope  @ stdin:5  [5] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [6] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3107  [7] include_string  @ ./loading.jl:3117 [inlined]  [8] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:350  [9] _start()  @ Base ./client.jl:593 in expression starting at /home/pkgeval/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:1 in expression starting at stdin:5 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("004f8eba-9623-5d64-8581-88f9ad4dca18"), "JumpProcessesOrdinaryDiffEqCoreExt") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::Nothing)  @ Base ./loading.jl:2812  [3] _require_prelocked(uuidkey::Base.PkgId, env::Nothing)  @ Base ./loading.jl:2666  [4] _require_prelocked  @ ./loading.jl:2660 [inlined]  [5] run_extension_callbacks(extid::Base.ExtensionId)  @ Base ./loading.jl:1766  [6] run_extension_callbacks(pkgid::Base.PkgId)  @ Base ./loading.jl:1803  [7] run_package_callbacks(modkey::Base.PkgId)  @ Base ./loading.jl:1619  [8] _require_search_from_serialized(pkg::Base.PkgId, sourcespec::Base.PkgLoadSpec, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String})  @ Base ./loading.jl:2295  [9] _require_search_from_serialized  @ ./loading.jl:2172 [inlined]  [10] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2805  [11] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2666  [12] macro expansion  @ ./loading.jl:2593 [inlined]  [13] macro expansion  @ ./lock.jl:376 [inlined]  [14] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2557  [15] require  @ ./loading.jl:2533 [inlined]  [16] eval_import_path  @ ./module.jl:36 [inlined]  [17] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [18] _eval_using  @ ./module.jl:137 [inlined]  [19] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [20] top-level scope  @ ~/.julia/packages/SBMLToolkitTestSuite/QDNw7/src/SBMLToolkitTestSuite.jl:4  [21] include(mod::Module, _path::String)  @ Base ./Base.jl:326  [22] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3265  [23] top-level scope  @ stdin:5  [24] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3107  [26] include_string  @ ./loading.jl:3117 [inlined]  [27] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:350  [28] _start()  @ Base ./client.jl:593 in expression starting at /home/pkgeval/.julia/packages/SBMLToolkitTestSuite/QDNw7/src/SBMLToolkitTestSuite.jl:1 in expression starting at stdin:5 2 dependencies had output during precompilation: ┌ JumpProcesses → JumpProcessesOrdinaryDiffEqCoreExt │ WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. │ WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqRODEAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. │ ERROR: LoadError: UndefVarError: `StochasticDiffEqAlgorithm` not defined in `JumpProcessesOrdinaryDiffEqCoreExt` │ Suggestion: this global was defined as `OrdinaryDiffEqCore.StochasticDiffEqAlgorithm` but not assigned a value. │ Stacktrace: │ [1] top-level scope │ @ ~/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:17 │ [2] include(mod::Module, _path::String) │ @ Base ./Base.jl:326 │ [3] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base ./loading.jl:3265 │ [4] top-level scope │ @ stdin:5 │ [5] eval(m::Module, e::Any) │ @ Core ./boot.jl:517 │ [6] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:3107 │ [7] include_string │ @ ./loading.jl:3117 [inlined] │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:350 │ [9] _start() │ @ Base ./client.jl:593 │ in expression starting at /home/pkgeval/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:1 │ in expression starting at stdin:5 └ ┌ SBMLToolkitTestSuite │ [Output was shown above] └ Rules: Error During Test at /home/pkgeval/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:30 Got exception outside of a @test LoadError: The following 2 packages failed to precompile: JumpProcesses → JumpProcessesOrdinaryDiffEqCoreExt Failed to precompile JumpProcessesOrdinaryDiffEqCoreExt [004f8eba-9623-5d64-8581-88f9ad4dca18] to "/home/pkgeval/.julia/compiled/v1.14/JumpProcessesOrdinaryDiffEqCoreExt/jl_FnYxJw" (ProcessExited(1)). SBMLToolkitTestSuite Failed to precompile SBMLToolkitTestSuite [792e603a-1588-414c-b272-614011baa40e] to "/home/pkgeval/.julia/compiled/v1.14/SBMLToolkitTestSuite/jl_PsmIqF" (ProcessExited(1)). in expression starting at /home/pkgeval/.julia/packages/SBMLToolkit/7Hd7h/test/rules.jl:2 WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqRODEAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. ERROR: LoadError: UndefVarError: `StochasticDiffEqAlgorithm` not defined in `JumpProcessesOrdinaryDiffEqCoreExt` Suggestion: this global was defined as `OrdinaryDiffEqCore.StochasticDiffEqAlgorithm` but not assigned a value. Stacktrace:  [1] top-level scope  @ ~/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:17  [2] include(mod::Module, _path::String)  @ Base ./Base.jl:326  [3] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3265  [4] top-level scope  @ stdin:5  [5] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [6] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3107  [7] include_string  @ ./loading.jl:3117 [inlined]  [8] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:350  [9] _start()  @ Base ./client.jl:593 in expression starting at /home/pkgeval/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:1 in expression starting at stdin:5 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("004f8eba-9623-5d64-8581-88f9ad4dca18"), "JumpProcessesOrdinaryDiffEqCoreExt") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::Nothing)  @ Base ./loading.jl:2812  [3] _require_prelocked(uuidkey::Base.PkgId, env::Nothing)  @ Base ./loading.jl:2666  [4] _require_prelocked  @ ./loading.jl:2660 [inlined]  [5] run_extension_callbacks(extid::Base.ExtensionId)  @ Base ./loading.jl:1766  [6] run_extension_callbacks(pkgid::Base.PkgId)  @ Base ./loading.jl:1803  [7] run_package_callbacks(modkey::Base.PkgId)  @ Base ./loading.jl:1619  [8] _require_search_from_serialized(pkg::Base.PkgId, sourcespec::Base.PkgLoadSpec, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String})  @ Base ./loading.jl:2295  [9] _require_search_from_serialized  @ ./loading.jl:2172 [inlined]  [10] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2805  [11] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2666  [12] macro expansion  @ ./loading.jl:2593 [inlined]  [13] macro expansion  @ ./lock.jl:376 [inlined]  [14] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2557  [15] require  @ ./loading.jl:2533 [inlined]  [16] eval_import_path  @ ./module.jl:36 [inlined]  [17] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [18] _eval_using  @ ./module.jl:137 [inlined]  [19] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [20] top-level scope  @ ~/.julia/packages/SBMLToolkitTestSuite/QDNw7/src/SBMLToolkitTestSuite.jl:4  [21] include(mod::Module, _path::String)  @ Base ./Base.jl:326  [22] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3265  [23] top-level scope  @ stdin:5  [24] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3107  [26] include_string  @ ./loading.jl:3117 [inlined]  [27] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:350  [28] _start()  @ Base ./client.jl:593 in expression starting at /home/pkgeval/.julia/packages/SBMLToolkitTestSuite/QDNw7/src/SBMLToolkitTestSuite.jl:1 in expression starting at stdin:5 2 dependencies had output during precompilation: ┌ JumpProcesses → JumpProcessesOrdinaryDiffEqCoreExt │ WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. │ WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqRODEAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. │ ERROR: LoadError: UndefVarError: `StochasticDiffEqAlgorithm` not defined in `JumpProcessesOrdinaryDiffEqCoreExt` │ Suggestion: this global was defined as `OrdinaryDiffEqCore.StochasticDiffEqAlgorithm` but not assigned a value. │ Stacktrace: │ [1] top-level scope │ @ ~/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:17 │ [2] include(mod::Module, _path::String) │ @ Base ./Base.jl:326 │ [3] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base ./loading.jl:3265 │ [4] top-level scope │ @ stdin:5 │ [5] eval(m::Module, e::Any) │ @ Core ./boot.jl:517 │ [6] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:3107 │ [7] include_string │ @ ./loading.jl:3117 [inlined] │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:350 │ [9] _start() │ @ Base ./client.jl:593 │ in expression starting at /home/pkgeval/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:1 │ in expression starting at stdin:5 └ ┌ SBMLToolkitTestSuite │ [Output was shown above] └ Events: Error During Test at /home/pkgeval/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:30 Got exception outside of a @test LoadError: The following 2 packages failed to precompile: JumpProcesses → JumpProcessesOrdinaryDiffEqCoreExt Failed to precompile JumpProcessesOrdinaryDiffEqCoreExt [004f8eba-9623-5d64-8581-88f9ad4dca18] to "/home/pkgeval/.julia/compiled/v1.14/JumpProcessesOrdinaryDiffEqCoreExt/jl_w1oOWF" (ProcessExited(1)). SBMLToolkitTestSuite Failed to precompile SBMLToolkitTestSuite [792e603a-1588-414c-b272-614011baa40e] to "/home/pkgeval/.julia/compiled/v1.14/SBMLToolkitTestSuite/jl_iSLrPv" (ProcessExited(1)). in expression starting at /home/pkgeval/.julia/packages/SBMLToolkit/7Hd7h/test/events.jl:2 WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqRODEAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. ERROR: LoadError: UndefVarError: `StochasticDiffEqAlgorithm` not defined in `JumpProcessesOrdinaryDiffEqCoreExt` Suggestion: this global was defined as `OrdinaryDiffEqCore.StochasticDiffEqAlgorithm` but not assigned a value. Stacktrace:  [1] top-level scope  @ ~/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:17  [2] include(mod::Module, _path::String)  @ Base ./Base.jl:326  [3] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3265  [4] top-level scope  @ stdin:5  [5] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [6] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3107  [7] include_string  @ ./loading.jl:3117 [inlined]  [8] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:350  [9] _start()  @ Base ./client.jl:593 in expression starting at /home/pkgeval/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:1 in expression starting at stdin:5 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("004f8eba-9623-5d64-8581-88f9ad4dca18"), "JumpProcessesOrdinaryDiffEqCoreExt") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::Nothing)  @ Base ./loading.jl:2812  [3] _require_prelocked(uuidkey::Base.PkgId, env::Nothing)  @ Base ./loading.jl:2666  [4] _require_prelocked  @ ./loading.jl:2660 [inlined]  [5] run_extension_callbacks(extid::Base.ExtensionId)  @ Base ./loading.jl:1766  [6] run_extension_callbacks(pkgid::Base.PkgId)  @ Base ./loading.jl:1803  [7] run_package_callbacks(modkey::Base.PkgId)  @ Base ./loading.jl:1619  [8] _require_search_from_serialized(pkg::Base.PkgId, sourcespec::Base.PkgLoadSpec, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String})  @ Base ./loading.jl:2295  [9] _require_search_from_serialized  @ ./loading.jl:2172 [inlined]  [10] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2805  [11] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2666  [12] macro expansion  @ ./loading.jl:2593 [inlined]  [13] macro expansion  @ ./lock.jl:376 [inlined]  [14] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2557  [15] require  @ ./loading.jl:2533 [inlined]  [16] eval_import_path  @ ./module.jl:36 [inlined]  [17] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [18] _eval_using  @ ./module.jl:137 [inlined]  [19] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [20] top-level scope  @ ~/.julia/packages/SBMLToolkitTestSuite/QDNw7/src/SBMLToolkitTestSuite.jl:4  [21] include(mod::Module, _path::String)  @ Base ./Base.jl:326  [22] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3265  [23] top-level scope  @ stdin:5  [24] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3107  [26] include_string  @ ./loading.jl:3117 [inlined]  [27] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:350  [28] _start()  @ Base ./client.jl:593 in expression starting at /home/pkgeval/.julia/packages/SBMLToolkitTestSuite/QDNw7/src/SBMLToolkitTestSuite.jl:1 in expression starting at stdin:5 2 dependencies had output during precompilation: ┌ JumpProcesses → JumpProcessesOrdinaryDiffEqCoreExt │ WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. │ WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqRODEAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. │ ERROR: LoadError: UndefVarError: `StochasticDiffEqAlgorithm` not defined in `JumpProcessesOrdinaryDiffEqCoreExt` │ Suggestion: this global was defined as `OrdinaryDiffEqCore.StochasticDiffEqAlgorithm` but not assigned a value. │ Stacktrace: │ [1] top-level scope │ @ ~/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:17 │ [2] include(mod::Module, _path::String) │ @ Base ./Base.jl:326 │ [3] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base ./loading.jl:3265 │ [4] top-level scope │ @ stdin:5 │ [5] eval(m::Module, e::Any) │ @ Core ./boot.jl:517 │ [6] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:3107 │ [7] include_string │ @ ./loading.jl:3117 [inlined] │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:350 │ [9] _start() │ @ Base ./client.jl:593 │ in expression starting at /home/pkgeval/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:1 │ in expression starting at stdin:5 └ ┌ SBMLToolkitTestSuite │ [Output was shown above] └ Utils: Error During Test at /home/pkgeval/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:30 Got exception outside of a @test LoadError: The following 2 packages failed to precompile: JumpProcesses → JumpProcessesOrdinaryDiffEqCoreExt Failed to precompile JumpProcessesOrdinaryDiffEqCoreExt [004f8eba-9623-5d64-8581-88f9ad4dca18] to "/home/pkgeval/.julia/compiled/v1.14/JumpProcessesOrdinaryDiffEqCoreExt/jl_5v03WB" (ProcessExited(1)). SBMLToolkitTestSuite Failed to precompile SBMLToolkitTestSuite [792e603a-1588-414c-b272-614011baa40e] to "/home/pkgeval/.julia/compiled/v1.14/SBMLToolkitTestSuite/jl_53r5w2" (ProcessExited(1)). in expression starting at /home/pkgeval/.julia/packages/SBMLToolkit/7Hd7h/test/utils.jl:2 WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqRODEAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. ERROR: LoadError: UndefVarError: `StochasticDiffEqAlgorithm` not defined in `JumpProcessesOrdinaryDiffEqCoreExt` Suggestion: this global was defined as `OrdinaryDiffEqCore.StochasticDiffEqAlgorithm` but not assigned a value. Stacktrace:  [1] top-level scope  @ ~/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:17  [2] include(mod::Module, _path::String)  @ Base ./Base.jl:326  [3] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3265  [4] top-level scope  @ stdin:5  [5] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [6] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3107  [7] include_string  @ ./loading.jl:3117 [inlined]  [8] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:350  [9] _start()  @ Base ./client.jl:593 in expression starting at /home/pkgeval/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:1 in expression starting at stdin:5 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("004f8eba-9623-5d64-8581-88f9ad4dca18"), "JumpProcessesOrdinaryDiffEqCoreExt") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::Nothing)  @ Base ./loading.jl:2812  [3] _require_prelocked(uuidkey::Base.PkgId, env::Nothing)  @ Base ./loading.jl:2666  [4] _require_prelocked  @ ./loading.jl:2660 [inlined]  [5] run_extension_callbacks(extid::Base.ExtensionId)  @ Base ./loading.jl:1766  [6] run_extension_callbacks(pkgid::Base.PkgId)  @ Base ./loading.jl:1803  [7] run_package_callbacks(modkey::Base.PkgId)  @ Base ./loading.jl:1619  [8] _require_search_from_serialized(pkg::Base.PkgId, sourcespec::Base.PkgLoadSpec, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String})  @ Base ./loading.jl:2295  [9] _require_search_from_serialized  @ ./loading.jl:2172 [inlined]  [10] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2805  [11] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2666  [12] macro expansion  @ ./loading.jl:2593 [inlined]  [13] macro expansion  @ ./lock.jl:376 [inlined]  [14] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2557  [15] require  @ ./loading.jl:2533 [inlined]  [16] eval_import_path  @ ./module.jl:36 [inlined]  [17] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [18] _eval_using  @ ./module.jl:137 [inlined]  [19] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [20] top-level scope  @ ~/.julia/packages/SBMLToolkitTestSuite/QDNw7/src/SBMLToolkitTestSuite.jl:4  [21] include(mod::Module, _path::String)  @ Base ./Base.jl:326  [22] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3265  [23] top-level scope  @ stdin:5  [24] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3107  [26] include_string  @ ./loading.jl:3117 [inlined]  [27] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:350  [28] _start()  @ Base ./client.jl:593 in expression starting at /home/pkgeval/.julia/packages/SBMLToolkitTestSuite/QDNw7/src/SBMLToolkitTestSuite.jl:1 in expression starting at stdin:5 2 dependencies had output during precompilation: ┌ JumpProcesses → JumpProcessesOrdinaryDiffEqCoreExt │ WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. │ WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqRODEAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. │ ERROR: LoadError: UndefVarError: `StochasticDiffEqAlgorithm` not defined in `JumpProcessesOrdinaryDiffEqCoreExt` │ Suggestion: this global was defined as `OrdinaryDiffEqCore.StochasticDiffEqAlgorithm` but not assigned a value. │ Stacktrace: │ [1] top-level scope │ @ ~/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:17 │ [2] include(mod::Module, _path::String) │ @ Base ./Base.jl:326 │ [3] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base ./loading.jl:3265 │ [4] top-level scope │ @ stdin:5 │ [5] eval(m::Module, e::Any) │ @ Core ./boot.jl:517 │ [6] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:3107 │ [7] include_string │ @ ./loading.jl:3117 [inlined] │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:350 │ [9] _start() │ @ Base ./client.jl:593 │ in expression starting at /home/pkgeval/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:1 │ in expression starting at stdin:5 └ ┌ SBMLToolkitTestSuite │ [Output was shown above] └ Simulation results: Error During Test at /home/pkgeval/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:30 Got exception outside of a @test LoadError: The following 2 packages failed to precompile: JumpProcesses → JumpProcessesOrdinaryDiffEqCoreExt Failed to precompile JumpProcessesOrdinaryDiffEqCoreExt [004f8eba-9623-5d64-8581-88f9ad4dca18] to "/home/pkgeval/.julia/compiled/v1.14/JumpProcessesOrdinaryDiffEqCoreExt/jl_CcbPNo" (ProcessExited(1)). SBMLToolkitTestSuite Failed to precompile SBMLToolkitTestSuite [792e603a-1588-414c-b272-614011baa40e] to "/home/pkgeval/.julia/compiled/v1.14/SBMLToolkitTestSuite/jl_uWaX70" (ProcessExited(1)). in expression starting at /home/pkgeval/.julia/packages/SBMLToolkit/7Hd7h/test/simresults.jl:1 WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. WARNING: Imported binding OrdinaryDiffEqCore.StochasticDiffEqRODEAlgorithm was undeclared at import time during import to JumpProcessesOrdinaryDiffEqCoreExt. ERROR: LoadError: UndefVarError: `StochasticDiffEqAlgorithm` not defined in `JumpProcessesOrdinaryDiffEqCoreExt` Suggestion: this global was defined as `OrdinaryDiffEqCore.StochasticDiffEqAlgorithm` but not assigned a value. Stacktrace: [1] top-level scope @ ~/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:17 [2] include(mod::Module, _path::String) @ Base ./Base.jl:326 [3] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3265 [4] top-level scope @ stdin:5 [5] eval(m::Module, e::Any) @ Core ./boot.jl:517 [6] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:3107 [7] include_string @ ./loading.jl:3117 [inlined] [8] exec_options(opts::Base.JLOptions) @ Base ./client.jl:350 [9] _start() @ Base ./client.jl:593 in expression starting at /home/pkgeval/.julia/packages/JumpProcesses/JjLrE/ext/JumpProcessesOrdinaryDiffEqCoreExt.jl:1 in expression starting at stdin:5 ┌ Error: Error during loading of extension JumpProcessesOrdinaryDiffEqCoreExt of JumpProcesses, use `Base.retry_load_extensions()` to retry. │ exception = │ 1-element ExceptionStack: │ Failed to precompile JumpProcessesOrdinaryDiffEqCoreExt [004f8eba-9623-5d64-8581-88f9ad4dca18] to "/home/pkgeval/.julia/compiled/v1.14/JumpProcessesOrdinaryDiffEqCoreExt/jl_f9V6KF" (ProcessExited(1)). │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:56 │ [2] compilecache(pkg::Base.PkgId, spec::Base.PkgLoadSpec, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, loadable_exts::Vector{Base.PkgId}, signal_channel::Nothing, pid_channel::Nothing) │ @ Base ./loading.jl:3585 │ [3] kwcall(::@NamedTuple{loadable_exts::Vector{Base.PkgId}}, ::typeof(Base.compilecache), pkg::Base.PkgId, spec::Base.PkgLoadSpec, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) │ @ Base ./loading.jl:3429 │ [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, Base.PkgLoadSpec, Dict{String, Int64}, Base.RefValue{Bool}})() │ @ Base ./loading.jl:2876 │ [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, Base.PkgLoadSpec, Dict{String, Int64}, Base.RefValue{Bool}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) │ @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.14/FileWatching/src/pidfile.jl:97 │ [6] #mkpidlock#7 │ @ /opt/julia/share/julia/stdlib/v1.14/FileWatching/src/pidfile.jl:92 [inlined] │ [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) │ @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.14/FileWatching/src/pidfile.jl:118 │ [8] #invokelatest_gr#230 │ @ ./reflection.jl:1374 [inlined] │ [9] invokelatest_gr │ @ ./reflection.jl:1366 [inlined] │ [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, Base.PkgLoadSpec, Dict{String, Int64}, Base.RefValue{Bool}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) │ @ Base ./loading.jl:4155 │ [11] maybe_cachefile_lock │ @ ./loading.jl:4152 [inlined] │ [12] __require_prelocked(pkg::Base.PkgId, env::Nothing) │ @ Base ./loading.jl:2837 │ [13] _require_prelocked(uuidkey::Base.PkgId, env::Nothing) │ @ Base ./loading.jl:2666 │ [14] _require_prelocked │ @ ./loading.jl:2660 [inlined] │ [15] run_extension_callbacks(extid::Base.ExtensionId) │ @ Base ./loading.jl:1766 │ [16] run_extension_callbacks(pkgid::Base.PkgId) │ @ Base ./loading.jl:1803 │ [17] run_package_callbacks(modkey::Base.PkgId) │ @ Base ./loading.jl:1619 │ [18] _require_search_from_serialized(pkg::Base.PkgId, sourcespec::Base.PkgLoadSpec, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) │ @ Base ./loading.jl:2295 │ [19] _require_search_from_serialized │ @ ./loading.jl:2172 [inlined] │ [20] __require_prelocked(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2805 │ [21] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2666 │ [22] macro expansion │ @ ./loading.jl:2593 [inlined] │ [23] macro expansion │ @ ./lock.jl:376 [inlined] │ [24] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2557 │ [25] require │ @ ./loading.jl:2533 [inlined] │ [26] eval_import_path │ @ ./module.jl:36 [inlined] │ [27] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [28] _eval_using │ @ ./module.jl:137 [inlined] │ [29] _eval_using(to::Module, path::Expr) │ @ Base ./module.jl:137 │ [30] top-level scope │ @ ~/.julia/packages/SBMLToolkit/7Hd7h/test/wuschel.jl:5 │ [31] include(mapexpr::Function, mod::Module, _path::String) │ @ Base ./Base.jl:327 │ [32] top-level scope │ @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:26 │ [33] macro expansion │ @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] │ [34] macro expansion │ @ ~/.julia/packages/SBMLToolkit/7Hd7h/test/runtests.jl:26 [inlined] │ [35] eval(m::Module, e::Any) │ @ Core ./boot.jl:517 │ [36] top-level scope │ @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:4 │ [37] macro expansion │ @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] │ [38] macro expansion │ @ ~/.julia/packages/SBMLToolkit/7Hd7h/test/runtests.jl:25 [inlined] │ [39] macro expansion │ @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [inlined] │ [40] eval(m::Module, e::Any) │ @ Core ./boot.jl:517 │ [41] top-level scope │ @ ~/.julia/packages/SBMLToolkit/7Hd7h/test/runtests.jl:28 │ [42] include(mapexpr::Function, mod::Module, _path::String) │ @ Base ./Base.jl:327 │ [43] top-level scope │ @ none:6 │ [44] eval(m::Module, e::Any) │ @ Core ./boot.jl:517 │ [45] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:318 │ [46] _start() │ @ Base ./client.jl:593 └ @ Base loading.jl:1776 ┌ Warning: SBML SpeciesReferences does not contain stoichiometries. Assuming stoichiometry of 1. └ @ SBMLToolkit ~/.julia/packages/SBMLToolkit/7Hd7h/src/reactions.jl:92 ┌ Warning: Stoichiometries of SpeciesReferences are not defined. Setting to 1. └ @ SBMLToolkit ~/.julia/packages/SBMLToolkit/7Hd7h/src/reactions.jl:117 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 136 running 1 of 1 signal (10): User defined signal 1 compare_fields at /source/src/builtins.c:159 isequal_with_metadata at /home/pkgeval/.julia/packages/SymbolicUtils/N76BL/src/types.jl:494 isequal_with_metadata at /home/pkgeval/.julia/packages/SymbolicUtils/N76BL/src/types.jl:439 unknown function (ip: 0x7474f6efff36) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 ht_keyindex2_shorthash! at /home/pkgeval/.julia/packages/SymbolicUtils/N76BL/src/WeakCacheSets.jl:150 getkey! at /home/pkgeval/.julia/packages/SymbolicUtils/N76BL/src/WeakCacheSets.jl:205 BasicSymbolic at /home/pkgeval/.julia/packages/SymbolicUtils/N76BL/src/types.jl:682 [inlined] #_#17 at /home/pkgeval/.julia/packages/SymbolicUtils/N76BL/src/types.jl:691 [inlined] Sym at /home/pkgeval/.julia/packages/SymbolicUtils/N76BL/src/types.jl:689 unknown function (ip: 0x7474f6ea25f6) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 setproperties at /home/pkgeval/.julia/packages/SymbolicUtils/N76BL/src/types.jl:110 set at /home/pkgeval/.julia/packages/Setfield/ZezIj/src/lens.jl:122 [inlined] macro expansion at /home/pkgeval/.julia/packages/Setfield/ZezIj/src/sugar.jl:198 [inlined] setmetadata at /home/pkgeval/.julia/packages/SymbolicUtils/N76BL/src/types.jl:0 unknown function (ip: 0x7474f6e9ffdd) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 #create_param#29 at /home/pkgeval/.julia/packages/SBMLToolkit/7Hd7h/src/utils.jl:91 create_param at /home/pkgeval/.julia/packages/SBMLToolkit/7Hd7h/src/utils.jl:89 [inlined] create_symbol at /home/pkgeval/.julia/packages/SBMLToolkit/7Hd7h/src/utils.jl:125 get_mappings at /home/pkgeval/.julia/packages/SBMLToolkit/7Hd7h/src/systems.jl:142 get_substitutions at /home/pkgeval/.julia/packages/SBMLToolkit/7Hd7h/src/utils.jl:23 get_events at /home/pkgeval/.julia/packages/SBMLToolkit/7Hd7h/src/events.jl:5 #ReactionSystem#3 at /home/pkgeval/.julia/packages/SBMLToolkit/7Hd7h/src/systems.jl:103 ReactionSystem at /home/pkgeval/.julia/packages/SBMLToolkit/7Hd7h/src/systems.jl:54 [inlined] #ODESystem#7 at /home/pkgeval/.julia/packages/SBMLToolkit/7Hd7h/src/systems.jl:121 ODESystem at /home/pkgeval/.julia/packages/SBMLToolkit/7Hd7h/src/systems.jl:119 unknown function (ip: 0x74752695e8f2) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2301 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:768 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:782 ijl_toplevel_eval_in at /source/src/toplevel.c:827 eval at ./boot.jl:517 include_string at ./loading.jl:3107 _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 _include at ./loading.jl:3167 include at ./Base.jl:327 IncludeInto at ./Base.jl:328 unknown function (ip: 0x7474f6e92032) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2301 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:768 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_eval_module_expr at /source/src/toplevel.c:263 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:665 ijl_toplevel_eval at /source/src/toplevel.c:782 ijl_toplevel_eval_in at /source/src/toplevel.c:827 eval at ./boot.jl:517 jfptr_eval_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2301 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:768 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_eval_module_expr at /source/src/toplevel.c:263 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:665 ijl_toplevel_eval at /source/src/toplevel.c:782 ijl_toplevel_eval_in at /source/src/toplevel.c:827 eval at ./boot.jl:517 jfptr_eval_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2301 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:768 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:782 ijl_toplevel_eval_in at /source/src/toplevel.c:827 eval at ./boot.jl:517 include_string at ./loading.jl:3107 _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 _include at ./loading.jl:3167 include at ./Base.jl:327 IncludeInto at ./Base.jl:328 jfptr_IncludeInto_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2301 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:768 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:782 ijl_toplevel_eval_in at /source/src/toplevel.c:827 eval at ./boot.jl:517 exec_options at ./client.jl:318 _start at ./client.jl:593 jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2301 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x74753caae249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) #= 28.1 ms =# precompile(Tuple{typeof(Base.hashindex), Symbol, Int64}) #= 35.8 ms =# precompile(Tuple{typeof(Core.kwcall), NamedTuple{(:op,), Tuple{typeof(DataType)}}, typeof(ModelingToolkit.vars!), Base.Set{Any}, Int32}) #= 24.5 ms =# precompile(Tuple{typeof(Core.kwcall), NamedTuple{(:op,), Tuple{typeof(DataType)}}, typeof(ModelingToolkit.vars!), Base.Set{Any}, Base.Rational{Int32}}) #= 30.4 ms =# precompile(Tuple{typeof(Catalyst.is_catalyst_function), SymbolicUtils.BasicSymbolic{SymbolicUtils.FnType{Tuple{Any}, Real, Z} where Z}}) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1246 wait_forever at ./task.jl:1168 jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2301 [inlined] start_task at /source/src/task.c:1275 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007f4fb9de14b0 Total snapshots: 529. Utilization: 0% ╎529 @Base/task.jl:1168 wait_forever() 528╎ 529 @Base/task.jl:1246 wait() [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1246 wait_forever at ./task.jl:1168 jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2301 [inlined] start_task at /source/src/task.c:1275 unknown function (ip: (nil)) at (unknown file) Allocations: 28560154 (Pool: 28559235; Big: 919); GC: 26 [136] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/SBMLToolkit/7Hd7h/test/wuschel.jl:18 unknown function (ip: 0x7474f6e9d780) at (unknown file) hash2 at /home/pkgeval/.julia/packages/SymbolicUtils/N76BL/src/types.jl:625 unknown function (ip: 0x7474f6e9d7a9) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 hash2 at /home/pkgeval/.julia/packages/SymbolicUtils/N76BL/src/types.jl:620 unknown function (ip: 0x7474f6e9d7a9) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_invoke at /source/src/gf.c:4120 hash2 at /home/pkgeval/.julia/packages/SymbolicUtils/N76BL/src/types.jl:607 [inlined] hashindex at /home/pkgeval/.julia/packages/SymbolicUtils/N76BL/src/WeakCacheSets.jl:52 [inlined] ht_keyindex2_shorthash! at /home/pkgeval/.julia/packages/SymbolicUtils/N76BL/src/WeakCacheSets.jl:133 getkey! at /home/pkgeval/.julia/packages/SymbolicUtils/N76BL/src/WeakCacheSets.jl:205 BasicSymbolic at /home/pkgeval/.julia/packages/SymbolicUtils/N76BL/src/types.jl:682 [inlined] #Add#22 at /home/pkgeval/.julia/packages/SymbolicUtils/N76BL/src/types.jl:728 Add at /home/pkgeval/.julia/packages/SymbolicUtils/N76BL/src/types.jl:712 unknown function (ip: 0x7474f01e142a) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 + at /home/pkgeval/.julia/packages/SymbolicUtils/N76BL/src/types.jl:1681 unknown function (ip: 0x7474f01e4566) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2301 [inlined] jl_f__apply_iterate at /source/src/builtins.c:897 basicsymbolic at /home/pkgeval/.julia/packages/SymbolicUtils/N76BL/src/types.jl:1012 _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 maketerm at /home/pkgeval/.julia/packages/SymbolicUtils/N76BL/src/types.jl:997 _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 #fast_substitute#170 at /home/pkgeval/.julia/packages/Symbolics/T2Tbs/src/variable.jl:721 fast_substitute at /home/pkgeval/.julia/packages/Symbolics/T2Tbs/src/variable.jl:699 [inlined] #172 at /home/pkgeval/.julia/packages/Symbolics/T2Tbs/src/variable.jl:711 unknown function (ip: 0x747526911ed2) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 iterate at ./generator.jl:48 [inlined] collect_to! at ./array.jl:909 collect_to_with_first! at ./array.jl:864 unknown function (ip: 0x7475269121a2) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 _collect at ./array.jl:858 collect_similar at ./array.jl:763 unknown function (ip: 0x747526911806) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 map at ./abstractarray.jl:3390 unknown function (ip: 0x7474f01a69b6) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 #fast_substitute#170 at /home/pkgeval/.julia/packages/Symbolics/T2Tbs/src/variable.jl:709 fast_substitute at /home/pkgeval/.julia/packages/Symbolics/T2Tbs/src/variable.jl:699 [inlined] #172 at /home/pkgeval/.julia/packages/Symbolics/T2Tbs/src/variable.jl:711 unknown function (ip: 0x747526911ed2) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 iterate at ./generator.jl:48 [inlined] collect_to! at ./array.jl:909 collect_to_with_first! at ./array.jl:864 unknown function (ip: 0x7475269121a2) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 _collect at ./array.jl:858 collect_similar at ./array.jl:763 unknown function (ip: 0x747526911806) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 map at ./abstractarray.jl:3390 unknown function (ip: 0x7474f01a69b6) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 #fast_substitute#170 at /home/pkgeval/.julia/packages/Symbolics/T2Tbs/src/variable.jl:709 fast_substitute at /home/pkgeval/.julia/packages/Symbolics/T2Tbs/src/variable.jl:699 unknown function (ip: 0x7474eede711d) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 #fixpoint_sub#159 at /home/pkgeval/.julia/packages/Symbolics/T2Tbs/src/variable.jl:641 fixpoint_sub at /home/pkgeval/.julia/packages/Symbolics/T2Tbs/src/variable.jl:635 unknown function (ip: 0x7475269110f6) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 #unhack_observed##2 at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/nonlinear/initializesystem.jl:778 iterate at ./generator.jl:48 [inlined] collect_to! at ./array.jl:909 collect_to_with_first! at ./array.jl:864 unknown function (ip: 0x747526913555) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 _collect at ./array.jl:858 collect_similar at ./array.jl:763 [inlined] map at ./abstractarray.jl:3390 [inlined] unhack_observed at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/nonlinear/initializesystem.jl:777 #generate_initializesystem#1447 at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/nonlinear/initializesystem.jl:19 generate_initializesystem at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/nonlinear/initializesystem.jl:6 [inlined] #_#1415 at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/diffeqs/abstractodesystem.jl:0 InitializationProblem at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/diffeqs/abstractodesystem.jl:1442 unknown function (ip: 0x7474e1b940b3) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2301 [inlined] jl_f__apply_iterate at /source/src/builtins.c:897 #_#1413 at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/diffeqs/abstractodesystem.jl:1420 _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2301 [inlined] jl_f__apply_iterate at /source/src/builtins.c:897 InitializationProblem at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/diffeqs/abstractodesystem.jl:1419 _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 #maybe_build_initialization_problem#859 at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/problem_utils.jl:1070 maybe_build_initialization_problem at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/problem_utils.jl:1059 unknown function (ip: 0x7474e1b91653) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 #process_SciMLProblem#869 at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/problem_utils.jl:1325 unknown function (ip: 0x7474e1b91449) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 process_SciMLProblem at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/problem_utils.jl:1262 #_#1367 at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/diffeqs/abstractodesystem.jl:806 ODEProblem at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/diffeqs/abstractodesystem.jl:781 [inlined] ODEProblem at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/diffeqs/abstractodesystem.jl:781 unknown function (ip: 0x7474e1b8d48e) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2301 [inlined] jl_f__apply_iterate at /source/src/builtins.c:897 #_#1365 at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/diffeqs/abstractodesystem.jl:774 _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2301 [inlined] jl_f__apply_iterate at /source/src/builtins.c:897 ODEProblem at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/diffeqs/abstractodesystem.jl:773 _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2301 [inlined] jl_f__apply_iterate at /source/src/builtins.c:897 #ODEProblem#1363 at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/diffeqs/abstractodesystem.jl:763 _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2301 [inlined] jl_f__apply_iterate at /source/src/builtins.c:897 ODEProblem at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/diffeqs/abstractodesystem.jl:762 _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2301 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:768 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:782 ijl_toplevel_eval_in at /source/src/toplevel.c:827 eval at ./boot.jl:517 include_string at ./loading.jl:3107 _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 _include at ./loading.jl:3167 include at ./Base.jl:327 IncludeInto at ./Base.jl:328 unknown function (ip: 0x7474f6e92032) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2301 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:768 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_eval_module_expr at /source/src/toplevel.c:263 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:665 ijl_toplevel_eval at /source/src/toplevel.c:782 ijl_toplevel_eval_in at /source/src/toplevel.c:827 eval at ./boot.jl:517 jfptr_eval_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2301 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:768 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_eval_module_expr at /source/src/toplevel.c:263 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:665 ijl_toplevel_eval at /source/src/toplevel.c:782 ijl_toplevel_eval_in at /source/src/toplevel.c:827 eval at ./boot.jl:517 jfptr_eval_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2301 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:768 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:782 ijl_toplevel_eval_in at /source/src/toplevel.c:827 eval at ./boot.jl:517 include_string at ./loading.jl:3107 _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 _include at ./loading.jl:3167 include at ./Base.jl:327 IncludeInto at ./Base.jl:328 jfptr_IncludeInto_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2301 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:768 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:782 ijl_toplevel_eval_in at /source/src/toplevel.c:827 eval at ./boot.jl:517 exec_options at ./client.jl:318 _start at ./client.jl:593 jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2301 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x74753caae249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 265403481 (Pool: 265401176; Big: 2305); GC: 91 PkgEval terminated after 2725.35s: test duration exceeded the time limit