Package evaluation to test OceanTransportMatrixBuilder on Julia 1.14.0-DEV.1918 (78a0dc1151*) started at 2026-03-19T15:06:23.903 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 14.19s ################################################################################ # Installation # Installing OceanTransportMatrixBuilder... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [c2b4a04e] + OceanTransportMatrixBuilder v0.8.3 Updating `~/.julia/environments/v1.14/Manifest.toml` [ec485272] + ArnoldiMethod v0.4.0 [864edb3b] + DataStructures v0.19.3 [b4f34e82] + Distances v0.10.12 [86223c79] + Graphs v1.14.0 [d25df0c9] + Inflate v0.1.5 [1914dd2f] + MacroTools v0.5.16 [c2b4a04e] + OceanTransportMatrixBuilder v0.8.3 [bac558e1] + OrderedCollections v1.8.1 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.2 [699a6c99] + SimpleTraits v0.9.5 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.30+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Installation completed after 1.5s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/RUPmD/src/julia-1.13/activate_set.jl:78 Precompiling package dependencies... Precompiling packages... 3667.4 ms ✓ YAXArrayBase 4024.1 ms ✓ aws_checksums_jll 6285.7 ms ✓ SparseMatrixColorings → SparseMatrixColoringsColorsExt 5902.4 ms ✓ DimensionalData → DimensionalDataStatsBaseExt 6254.1 ms ✓ DimensionalData → DimensionalDataAbstractFFTsExt 3248.6 ms ✓ DimensionalData → DimensionalDataChainRulesCoreExt 5137.8 ms ✓ NaNStatistics → NaNStatisticsDimensionalDataExt 4513.7 ms ✓ aws_c_io_jll 99378.9 ms ✓ TiffImages 8435.3 ms ✓ OceanTransportMatrixBuilder 8364.0 ms ✓ Interpolations → InterpolationsUnitfulExt 5343.3 ms ✓ DiskArrayTools 2191.4 ms ✓ XMLDict 12676.6 ms ✓ OptimizationBase 56510.3 ms ✓ MathTeXEngine 10453.8 ms ✓ mpif_jll 8395.2 ms ✓ SciMLBase → SciMLBaseDistributionsExt 8081.8 ms ✓ KernelDensity 10150.4 ms ✓ WeightedOnlineStats 12798.6 ms ✓ Optim 5905.9 ms ✓ YAXArrayBase → DimensionalDataExt 3380.9 ms ✓ YAXArrayBase → AxisArraysExt 4320.2 ms ✓ aws_c_http_jll 13797.1 ms ✓ AWS 1094.1 ms ✓ OptimizationBase → OptimizationFiniteDiffExt 2795.0 ms ✓ OptimizationBase → OptimizationForwardDiffExt 14638.7 ms ✓ Optimization 699294.9 ms ✓ Makie 5413.3 ms ✓ aws_c_auth_jll 9852.8 ms ✓ AWSS3 10608.4 ms ✓ OptimizationIpopt 62887.5 ms ✓ OptimizationOptimJL 141109.7 ms ✓ DimensionalData → DimensionalDataMakieExt 158663.7 ms ✓ SciMLBase → SciMLBaseMakieExt 566222.2 ms ✓ CairoMakie 3143.6 ms ✓ aws_c_s3_jll 12253.6 ms ✓ Zarr 3708.4 ms ✓ HDF5_jll 8894.8 ms ✓ YAXArrayBase → ZarrExt 22786.6 ms ✓ DiskArrayEngine 9405.4 ms ✓ NetCDF_jll 28005.9 ms ✓ YAXArrays 16275.4 ms ✓ NetCDF 14450.5 ms ✓ YAXArrayBase → NetCDFExt 44 dependencies successfully precompiled in 2109 seconds. 467 already precompiled. Precompilation completed after 1309.29s ################################################################################ # Testing # Testing OceanTransportMatrixBuilder Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_cyjdHK/Project.toml` [336ed68f] + CSV v0.10.16 [13f3f980] + CairoMakie v0.15.9 [a93c6f00] + DataFrames v1.8.1 ⌅ [0703355e] + DimensionalData v0.29.27 [9a22fb26] + GibbsSeaWater v0.1.4 ⌃ [86223c79] ↓ Graphs v1.14.0 ⇒ v1.13.1 [ee78f7c6] + Makie v0.24.9 [b946abbf] + NaNStatistics v0.6.56 [30363a11] + NetCDF v0.12.2 [c2b4a04e] + OceanTransportMatrixBuilder v0.8.3 [f8b46487] + TestItemRunner v1.1.4 [1c621080] + TestItems v1.0.0 [1986cc42] + Unitful v1.28.0 [c21b50f5] + YAXArrays v0.7.3 [0a941bbe] + Zarr v0.9.6 [f43a241f] ~ Downloads ⇒ v1.7.0 [8dfed614] ~ Test ⇒ v1.11.0 Updating `/tmp/jl_cyjdHK/Manifest.toml` [47edcb42] + ADTypes v1.21.0 [fbe9abb3] + AWS v1.98.0 [1c724243] + AWSS3 v0.11.4 [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.43 [79e6a3ab] + Adapt v4.5.0 [35492f91] + AdaptivePredicates v1.2.0 [66dad0bd] + AliasTables v1.1.3 [27a7e980] + Animations v0.4.2 [dce04be8] + ArgCheck v2.5.0 [4fba245c] + ArrayInterface v7.23.0 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Makie v0.24.9 [dbb5928d] + MappedArrays v0.4.3 [0a4f8689] + MathTeXEngine v0.6.7 [739be429] + MbedTLS v1.1.10 [e1d29d7a] + Missings v1.2.0 [78c3b35d] + Mocking v0.8.1 [e94cdb99] + MosaicViews v0.3.4 [2e0e35c7] + Moshi v0.3.7 [46d2c3a1] + MuladdMacro v0.2.4 ⌅ [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [b946abbf] + NaNStatistics v0.6.56 [30363a11] + NetCDF v0.12.2 [f09324ee] + Netpbm v1.1.1 [510215fc] + Observables v0.5.5 [c2b4a04e] + OceanTransportMatrixBuilder v0.8.3 [6fe1bfb0] + OffsetArrays v1.17.0 [a15396b6] + OnlineStats v1.7.3 [925886fa] + OnlineStatsBase v1.7.1 [52e1d378] + OpenEXR v0.3.3 [4d8831e6] + OpenSSL v1.6.1 ⌅ [429524aa] + Optim v1.13.3 ⌅ [7f7a1694] + Optimization v4.8.0 ⌅ [bca83a33] + OptimizationBase v2.14.0 ⌅ [43fad042] + OptimizationIpopt v0.2.2 ⌃ [36348300] + OptimizationOptimJL v0.4.5 [90014a1f] + PDMats v0.11.37 [f57f5aa1] + PNGFiles v0.4.4 [19eb6ba3] + Packing v0.5.1 [5432bcbf] + PaddedViews v0.5.12 [fad6cfc8] + ParallelUtilities v0.8.6 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aws_c_common_jll v0.12.6+0 [73a04cd5] + aws_c_compression_jll v0.3.2+0 [3254fc65] + aws_c_http_jll v0.10.11+0 [13c41daa] + aws_c_io_jll v0.26.2+0 [bd1f34fb] + aws_c_s3_jll v0.11.5+0 [1282aa60] + aws_c_sdkutils_jll v0.2.4+1 [b2a88e68] + aws_checksums_jll v0.2.10+0 [c4b69c83] + dlfcn_win32_jll v1.4.2+0 [9a68df92] + isoband_jll v0.2.3+0 [477f73a3] + libaec_jll v1.1.5+0 [a4ae2306] + libaom_jll v3.13.1+0 [0ac62f75] + libass_jll v0.17.4+0 [8e53e030] + libdrm_jll v2.4.125+1 [f638f0a6] + libfdk_aac_jll v2.0.4+0 [b53b4c65] + libpng_jll v1.6.55+0 [075b6546] + libsixel_jll v1.10.5+0 [a9144af2] + libsodium_jll v1.0.21+0 [9a156e7d] + libva_jll v2.23.0+0 [f27f6e37] + libvorbis_jll v1.3.8+0 [c5f90fcd] + libwebp_jll v1.6.0+0 [337d8026] + libzip_jll v1.11.3+0 [9aeb927a] + mpif_jll v0.1.5+0 [cddc5d3d] + s2n_tls_jll v1.7.0+0 ⌅ [1270edf5] + x264_jll v10164.0.1+0 [dfaa095f] + x265_jll v4.1.0+0 [0dad84c5] + ArgTools v1.1.2 [8bf52ea8] + CRC32c v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] ~ Downloads ⇒ v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [56ddb016] + Logging v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [3fa0cd96] + REPL v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [4607b0f0] + SuiteSparse [a4e569a6] + Tar v1.10.0 [8dfed614] ~ Test ⇒ v1.11.0 [cf7118a7] + UUIDs v1.11.0 [deac9b47] + LibCURL_jll v8.19.0+0 [e37daf67] + LibGit2_jll v1.9.2+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.12.2 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.5+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.8.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_cyjdHK/Project.toml` [336ed68f] CSV v0.10.16 [13f3f980] CairoMakie v0.15.9 [a93c6f00] DataFrames v1.8.1 ⌅ [0703355e] DimensionalData v0.29.27 [b4f34e82] Distances v0.10.12 [9a22fb26] GibbsSeaWater v0.1.4 ⌃ [86223c79] Graphs v1.13.1 [ee78f7c6] Makie v0.24.9 [b946abbf] NaNStatistics v0.6.56 [30363a11] NetCDF v0.12.2 [c2b4a04e] OceanTransportMatrixBuilder v0.8.3 [90137ffa] StaticArrays v1.9.18 [f8b46487] TestItemRunner v1.1.4 [1c621080] TestItems v1.0.0 [1986cc42] Unitful v1.28.0 [c21b50f5] YAXArrays v0.7.3 [0a941bbe] Zarr v0.9.6 [f43a241f] Downloads v1.7.0 [37e2e46d] LinearAlgebra v1.13.0 [2f01184e] SparseArrays v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_cyjdHK/Manifest.toml` [47edcb42] ADTypes v1.21.0 [fbe9abb3] AWS v1.98.0 [1c724243] AWSS3 v0.11.4 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.43 [79e6a3ab] Adapt v4.5.0 [35492f91] AdaptivePredicates v1.2.0 [66dad0bd] AliasTables v1.1.3 [27a7e980] Animations v0.4.2 [dce04be8] ArgCheck v2.5.0 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.23.0 [31f734f8] ArrowTypes v2.3.0 [67c07d97] Automa v1.1.0 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.8 [18cc8868] BaseDirs v1.3.2 [d1d4a3ce] BitFlags v0.1.9 [a74b3585] Blosc v0.7.3 [fa961155] CEnum v0.5.0 [179af706] CFTime v0.2.6 [96374032] CRlibm v1.0.2 [336ed68f] CSV v0.10.16 [159f3aea] Cairo v1.1.1 [13f3f980] CairoMakie v0.15.9 [d360d2e6] ChainRulesCore v1.26.0 [0b6fb165] ChunkCodecCore v1.0.1 [4c0bbee4] ChunkCodecLibZlib v1.0.0 [55437552] ChunkCodecLibZstd v1.0.0 [6309b1aa] CodecInflate64 v0.1.3 [944b1d66] CodecZlib v0.7.8 [a2cac450] ColorBrewer v0.4.2 [35d6a980] ColorSchemes v3.31.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 [38540f10] CommonSolve v0.2.6 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [95dc2771] ComputePipeline v0.1.7 [f0e56b4a] ConcurrentUtilities v2.5.1 [88cd18e8] ConsoleProgressMonitor v0.1.2 [187b0558] ConstructionBase v1.6.0 [d38c429a] Contour v0.6.3 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [b342263e] DateTimes64 v1.0.1 [927a84f5] DelaunayTriangulation v1.6.6 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.16 ⌅ [0703355e] DimensionalData v0.29.27 [2d4b2e14] DiskArrayEngine v0.3.2 [fcd2136c] DiskArrayTools v0.1.12 [3c3547ce] DiskArrays v0.4.19 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.123 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.7 [429591f6] ExactPredicates v2.2.9 [460bff9d] ExceptionUnwrapping v0.1.11 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [411431e0] Extents v0.1.6 [8f5d6c58] EzXML v1.2.3 [b86e33f2] FFTA v0.3.1 [9aa1b823] FastClosures v0.3.2 [5789e2e9] FileIO v1.18.0 [8fc22ac5] FilePaths v0.9.0 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.16.0 [6a86dc24] FiniteDiff v2.29.0 [53c48c17] FixedPointNumbers v0.8.5 [1fa38f19] Format v1.3.7 [f6369f11] ForwardDiff v1.3.2 [b38be410] FreeType v4.1.1 [663a7486] FreeTypeAbstraction v0.10.8 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 [46192b85] GPUArraysCore v0.2.0 [5c1252a2] GeometryBasics v0.5.10 [9a22fb26] GibbsSeaWater v0.1.4 [bc5e4493] GitHub v5.12.0 [c27321d9] Glob v1.4.0 [a2bd30eb] Graphics v1.1.3 ⌃ [86223c79] Graphs v1.13.1 [3955a311] GridLayoutBase v0.11.2 [42e2da0e] Grisu v1.0.2 [cd3eb016] HTTP v1.11.0 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [615f187c] IfElse v0.1.1 [2803e5a7] ImageAxes v0.6.12 [c817782e] ImageBase v0.1.7 [a09fc81d] ImageCore v0.10.5 [82e4d734] ImageIO v0.6.9 [bc367c6b] ImageMetadata v0.9.10 [9b13fd28] IndirectArrays v1.0.0 [d25df0c9] Inflate v0.1.5 [83e8ac13] IniFile v0.5.1 [842dd82b] InlineStrings v1.4.5 [0c81fc1b] InputBuffers v1.1.1 [18e54dd8] IntegerMathUtils v0.1.3 [85a1e053] Interfaces v0.3.2 ⌅ [a98d9a8b] Interpolations v0.15.1 [d1acc4aa] IntervalArithmetic v1.0.3 [8197267c] IntervalSets v0.7.13 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [b6b21f68] Ipopt v1.14.1 [92d709cd] IrrationalConstants v0.2.6 [f1662d9f] Isoband v0.1.1 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.4.0 [ae98c720] Jieko v0.2.1 [b835a17e] JpegTurbo v0.1.6 [5ab0869b] KernelDensity v0.6.11 [5be7bae1] LBFGSB v0.4.1 [8ac3fa9e] LRUCache v1.6.2 [b964fa9f] LaTeXStrings v1.4.0 [8cdb02fc] LazyModules v0.3.1 [1d6d02ad] LeftChildRightSiblingTrees v0.2.1 ⌃ [d3d80556] LineSearches v7.5.1 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 [3da0fdf6] MPIPreferences v0.1.12 [1914dd2f] MacroTools v0.5.16 [ee78f7c6] Makie v0.24.9 [dbb5928d] MappedArrays v0.4.3 [0a4f8689] MathTeXEngine v0.6.7 [739be429] MbedTLS v1.1.10 [e1d29d7a] Missings v1.2.0 [78c3b35d] Mocking v0.8.1 [e94cdb99] MosaicViews v0.3.4 [2e0e35c7] Moshi v0.3.7 [46d2c3a1] MuladdMacro v0.2.4 ⌅ [d41bc354] NLSolversBase v7.10.0 [77ba4419] NaNMath v1.1.3 [b946abbf] NaNStatistics v0.6.56 [30363a11] NetCDF v0.12.2 [f09324ee] Netpbm v1.1.1 [510215fc] Observables v0.5.5 [c2b4a04e] OceanTransportMatrixBuilder v0.8.3 [6fe1bfb0] OffsetArrays v1.17.0 [a15396b6] OnlineStats v1.7.3 [925886fa] OnlineStatsBase v1.7.1 [52e1d378] OpenEXR v0.3.3 [4d8831e6] OpenSSL v1.6.1 ⌅ [429524aa] Optim v1.13.3 ⌅ [7f7a1694] Optimization v4.8.0 ⌅ [bca83a33] OptimizationBase v2.14.0 ⌅ [43fad042] OptimizationIpopt v0.2.2 ⌃ [36348300] OptimizationOptimJL v0.4.5 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.37 [f57f5aa1] PNGFiles v0.4.4 [19eb6ba3] Packing v0.5.1 [5432bcbf] PaddedViews v0.5.12 [fad6cfc8] ParallelUtilities v0.8.6 [69de0a69] Parsers v2.8.3 [eebad327] PkgVersion v0.3.3 [995b91a9] PlotUtils v1.4.4 [647866c9] PolygonOps v0.1.2 [2dfb63ee] PooledArrays v1.4.3 [85a6dd25] PositiveFactorizations v0.2.4 [d236fae5] PreallocationTools v1.1.2 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.2 [08abe8d2] PrettyTables v3.2.3 [27ebfcd6] Primes v0.5.7 [33c8b6b6] ProgressLogging v0.1.6 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.4.0 [4b34888f] QOI v1.0.2 [1fd47b50] QuadGK v2.11.2 [b3c3ace0] RangeArrays v0.3.2 [c84ed2f1] Ratios v0.4.5 [3cdcf5f2] RecipesBase v1.3.4 [731186ca] RecursiveArrayTools v3.48.0 [189a3867] Reexport v1.2.2 [05181044] RelocatableFolders v1.0.1 [ae029012] Requires v1.3.1 [20febd7b] Retry v0.4.1 [79098fc4] Rmath v0.9.0 [5eaf0fd0] RoundingEmulator v0.2.1 [7e49a35a] RuntimeGeneratedFunctions v0.5.17 [fdea26ae] SIMD v3.7.2 [0bca4576] SciMLBase v2.150.0 [a6db7da4] SciMLLogging v1.9.1 [c0aeaf25] SciMLOperators v1.15.1 [431bcebd] SciMLPublic v1.0.1 [53ae85a6] SciMLStructures v1.10.0 [7e506255] ScopedValues v1.6.0 [6c6a2e73] Scratch v1.3.0 [91c51154] SentinelArrays v1.4.9 [efcf1570] Setfield v1.1.2 [65257c39] ShaderAbstractions v0.5.0 [992d4aef] Showoff v1.0.3 [73760f76] SignedDistanceFields v0.4.1 [777ac1f9] SimpleBufferStream v1.2.0 [699a6c99] SimpleTraits v0.9.5 [45858cf5] Sixel v0.1.5 [2133526b] SodiumSeal v0.1.1 [a2af1166] SortingAlgorithms v1.2.2 [9f842d2f] SparseConnectivityTracer v1.2.1 [0a514795] SparseMatrixColorings v0.4.25 [276daf66] SpecialFunctions v2.7.1 [171d559e] SplittablesBase v0.1.15 [860ef19b] StableRNGs v1.0.4 [cae243ae] StackViews v0.1.2 [aedffcd0] Static v1.3.1 [0d7ed370] StaticArrayInterface v1.9.0 [90137ffa] StaticArrays v1.9.18 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.10 [4c63d2b9] StatsFuns v1.5.2 [892a3eda] StringManipulation v0.4.4 [09ab397b] StructArrays v0.7.2 [ec057cc2] StructUtils v2.7.1 [2da68c74] SymDict v0.3.0 [2efcf032] SymbolicIndexingInterface v0.3.46 [3783bdb8] TableTraits v1.0.1 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OpenSSL_jll v3.5.5+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.8.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... [ Info: Loading catalog [ Info: Finding ztores for uo, vo, umo, vmo, mlotst, areacello, and volcello areacello_store = (filter((row->(#= /home/pkgeval/.julia/packages/OceanTransportMatrixBuilder/RArjH/test/online.jl:23 =# row.variable_id == "areacello" && (row.table_id == "Ofx" && common_filter(row)))), catalog)).zstore[1] = "gs://cmip6/CMIP6/CMIP/CSIRO/ACCESS-ESM1-5/historical/r1i1p1f1/Ofx/areacello/gn/v20191115/" volcello_store = (filter((row->(#= /home/pkgeval/.julia/packages/OceanTransportMatrixBuilder/RArjH/test/online.jl:24 =# row.variable_id == "volcello" && (row.table_id == "Ofx" && common_filter(row)))), catalog)).zstore[1] = "gs://cmip6/CMIP6/CMIP/CSIRO/ACCESS-ESM1-5/historical/r1i1p1f1/Ofx/volcello/gn/v20191115/" mlotst_store = (filter((row->(#= /home/pkgeval/.julia/packages/OceanTransportMatrixBuilder/RArjH/test/online.jl:25 =# row.variable_id == "mlotst" && (row.table_id == "Omon" && common_filter(row)))), catalog)).zstore[1] = "gs://cmip6/CMIP6/CMIP/CSIRO/ACCESS-ESM1-5/historical/r1i1p1f1/Omon/mlotst/gn/v20191115/" umo_store = (filter((row->(#= /home/pkgeval/.julia/packages/OceanTransportMatrixBuilder/RArjH/test/online.jl:26 =# row.variable_id == "umo" && (row.table_id == "Omon" && common_filter(row)))), catalog)).zstore[1] = "gs://cmip6/CMIP6/CMIP/CSIRO/ACCESS-ESM1-5/historical/r1i1p1f1/Omon/umo/gn/v20191115/" vmo_store = (filter((row->(#= /home/pkgeval/.julia/packages/OceanTransportMatrixBuilder/RArjH/test/online.jl:27 =# row.variable_id == "vmo" && (row.table_id == "Omon" && common_filter(row)))), catalog)).zstore[1] = "gs://cmip6/CMIP6/CMIP/CSIRO/ACCESS-ESM1-5/historical/r1i1p1f1/Omon/vmo/gn/v20191115/" uo_store = (filter((row->(#= /home/pkgeval/.julia/packages/OceanTransportMatrixBuilder/RArjH/test/online.jl:28 =# row.variable_id == "uo" && (row.table_id == "Omon" && common_filter(row)))), catalog)).zstore[1] = "gs://cmip6/CMIP6/CMIP/CSIRO/ACCESS-ESM1-5/historical/r1i1p1f1/Omon/uo/gn/v20191115/" vo_store = (filter((row->(#= /home/pkgeval/.julia/packages/OceanTransportMatrixBuilder/RArjH/test/online.jl:29 =# row.variable_id == "vo" && (row.table_id == "Omon" && common_filter(row)))), catalog)).zstore[1] = "gs://cmip6/CMIP6/CMIP/CSIRO/ACCESS-ESM1-5/historical/r1i1p1f1/Omon/vo/gn/v20191115/" [ Info: Lazily load data using Zarr [ Info: Select first time step to limit download size ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 264 running 1 of 1 signal (10): User defined signal 1 GenericMemory at ./boot.jl:654 [inlined] Array at ./boot.jl:714 [inlined] Array at ./boot.jl:727 [inlined] Array at ./boot.jl:735 [inlined] similar at ./abstractarray.jl:873 [inlined] similar at ./array.jl:409 [inlined] similar at ./abstractarray.jl:872 [inlined] _array_for_inner at ./array.jl:701 [inlined] _array_for at ./array.jl:704 [inlined] _switchtupleunion at ./../usr/share/julia/Compiler/src/typeutils.jl:335 #switchtupleunion#78 at ./../usr/share/julia/Compiler/src/typeutils.jl:304 switchtupleunion at ./../usr/share/julia/Compiler/src/typeutils.jl:300 [inlined] #find_union_split_method_matches#135 at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:350 find_union_split_method_matches at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:347 [inlined] #find_method_matches#133 at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:337 [inlined] find_method_matches at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:332 jfptr_find_method_matches_3.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 abstract_call_gf_by_type at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:119 abstract_call_known at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:2928 abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3036 abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3029 [inlined] abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3189 abstract_eval_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3207 [inlined] abstract_eval_statement_expr at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3571 abstract_eval_basic_statement at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3978 [inlined] abstract_eval_basic_statement at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3935 [inlined] typeinf_local at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4519 jfptr_typeinf_local_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 typeinf at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4797 const_prop_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:1386 abstract_call_method_with_const_args at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:921 abstract_call_method_with_const_args at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:890 [inlined] handle1 at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:177 infercalls at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:247 abstract_call_gf_by_type at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:328 abstract_call_known at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:2928 abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3036 infercalls at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:1957 abstract_apply at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:1977 abstract_call_known at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:2780 abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3036 abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3029 [inlined] abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3189 abstract_eval_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3207 [inlined] abstract_eval_statement_expr at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3571 abstract_eval_basic_statement at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3978 [inlined] abstract_eval_basic_statement at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3935 [inlined] typeinf_local at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4519 jfptr_typeinf_local_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 typeinf at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4797 const_prop_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:1386 abstract_call_method_with_const_args at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:921 abstract_call_method_with_const_args at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:890 [inlined] handle1 at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:177 infercalls at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:247 abstract_call_gf_by_type at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:328 abstract_call_known at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:2928 abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3036 abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3029 [inlined] abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3189 abstract_eval_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3207 [inlined] abstract_eval_statement_expr at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3571 abstract_eval_basic_statement at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3978 [inlined] abstract_eval_basic_statement at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3935 [inlined] typeinf_local at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4519 jfptr_typeinf_local_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 typeinf at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4797 typeinf_ext at ./../usr/share/julia/Compiler/src/typeinfer.jl:1535 typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1718 [inlined] typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1727 jfptr_typeinf_ext_toplevel_3.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2300 [inlined] jl_type_infer at /source/src/gf.c:467 jl_compile_method_internal at /source/src/gf.c:3640 _jl_invoke at /source/src/gf.c:4105 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2300 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:766 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:780 ijl_toplevel_eval_in at /source/src/toplevel.c:825 eval at ./boot.jl:517 include_string at ./loading.jl:3131 include_string at ./loading.jl:3141 _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2300 [inlined] jl_f_invokelatest at /source/src/builtins.c:910 #run_testitem##6 at /home/pkgeval/.julia/packages/TestItemRunner/ax5HJ/src/TestItemRunner.jl:119 [inlined] withpath at /home/pkgeval/.julia/packages/TestItemRunner/ax5HJ/src/vendored_code.jl:7 #run_testitem##4 at /home/pkgeval/.julia/packages/TestItemRunner/ax5HJ/src/TestItemRunner.jl:118 [inlined] cd at ./file.jl:112 unknown function (ip: 0x7b12c73c2816) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 run_testitem at /home/pkgeval/.julia/packages/TestItemRunner/ax5HJ/src/TestItemRunner.jl:117 unknown function (ip: 0x7b12c73c1c7e) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 macro expansion at /home/pkgeval/.julia/packages/TestItemRunner/ax5HJ/src/TestItemRunner.jl:276 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.14/Test/src/Test.jl:2412 [inlined] macro expansion at /home/pkgeval/.julia/packages/TestItemRunner/ax5HJ/src/TestItemRunner.jl:274 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.14/Test/src/Test.jl:2412 [inlined] macro expansion at /home/pkgeval/.julia/packages/TestItemRunner/ax5HJ/src/TestItemRunner.jl:252 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.14/Test/src/Test.jl:2412 [inlined] #run_tests#7 at /home/pkgeval/.julia/packages/TestItemRunner/ax5HJ/src/TestItemRunner.jl:249 run_tests at /home/pkgeval/.julia/packages/TestItemRunner/ax5HJ/src/TestItemRunner.jl:134 unknown function (ip: 0x7b12c72ff776) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2300 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:766 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:780 ijl_toplevel_eval_in at /source/src/toplevel.c:825 eval at ./boot.jl:517 include_string at ./loading.jl:3131 _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 _include at ./loading.jl:3191 include at ./Base.jl:324 IncludeInto at ./Base.jl:325 jfptr_IncludeInto_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2300 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:766 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:780 ijl_toplevel_eval_in at /source/src/toplevel.c:825 eval at ./boot.jl:517 exec_options at ./client.jl:310 _start at ./client.jl:585 jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2300 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7b12e1c07249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1246 wait_forever at ./task.jl:1168 jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2300 [inlined] start_task at /source/src/task.c:1275 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000079099b497c10 Total snapshots: 144. Utilization: 0% ╎144 @Base/task.jl:1168 wait_forever() 143╎ 144 @Base/task.jl:1246 wait() [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1246 wait_forever at ./task.jl:1168 jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2300 [inlined] start_task at /source/src/task.c:1275 unknown function (ip: (nil)) at (unknown file) Allocations: 25370960 (Pool: 25370072; Big: 888); GC: 29 [264] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/OceanTransportMatrixBuilder/RArjH/test/online.jl:41 emit_expr at /source/src/codegen.cpp:6521 emit_intrinsic at /source/src/intrinsics.cpp:1359 [inlined] emit_call at /source/src/codegen.cpp:5689 emit_expr at /source/src/codegen.cpp:6611 emit_ssaval_assign at /source/src/codegen.cpp:6128 emit_stmtpos at /source/src/codegen.cpp:6431 [inlined] emit_function at /source/src/codegen.cpp:9717 jl_emit_code at /source/src/codegen.cpp:10056 jl_emit_codeinst at /source/src/codegen.cpp:10121 jl_emit_codeinst_to_jit_impl at /source/src/jitlayers.cpp:464 add_codeinsts_to_jit! at ./../usr/share/julia/Compiler/src/typeinfer.jl:1712 typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1719 [inlined] typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1727 jfptr_typeinf_ext_toplevel_3.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2300 [inlined] jl_type_infer at /source/src/gf.c:467 jl_compile_method_internal at /source/src/gf.c:3640 _jl_invoke at /source/src/gf.c:4105 [inlined] ijl_apply_generic at /source/src/gf.c:4339 annotatedstring_optimize! at /source/usr/share/julia/stdlib/v1.14/StyledStrings/src/styledmarkup.jl:880 |> at ./operators.jl:980 [inlined] tree_format at /source/usr/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1064 print_tree at /source/usr/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1254 tree at /source/usr/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1308 print_group at /source/usr/share/julia/stdlib/v1.14/Profile/src/Profile.jl:389 #print#5 at /source/usr/share/julia/stdlib/v1.14/Profile/src/Profile.jl:331 print at /source/usr/share/julia/stdlib/v1.14/Profile/src/Profile.jl:271 [inlined] print at /source/usr/share/julia/stdlib/v1.14/Profile/src/Profile.jl:271 [inlined] print at /source/usr/share/julia/stdlib/v1.14/Profile/src/Profile.jl:271 _peek_report at /source/usr/share/julia/stdlib/v1.14/Profile/src/Profile.jl:94 unknown function (ip: 0x7b12a71488bf) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2300 [inlined] jl_f_invokelatest at /source/src/builtins.c:910 profile_printing_listener at ./Base.jl:356 #start_profile_listener##0 at ./Base.jl:374 jfptr_YY.start_profile_listenerYY.YY.0_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2300 [inlined] start_task at /source/src/task.c:1275 unknown function (ip: (nil)) at (unknown file) Allocations: 129285426 (Pool: 129284750; Big: 676); GC: 38 PkgEval terminated after 2726.52s: test duration exceeded the time limit