Package evaluation to test TransmissionChannelAnalysis on Julia 1.14.0-DEV.1893 (b4aba01002*) started at 2026-03-15T16:22:17.664 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 14.56s ################################################################################ # Installation # Installing TransmissionChannelAnalysis... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [d500094b] + TransmissionChannelAnalysis v0.2.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [861a8166] + Combinatorics v1.1.0 [34da2185] + Compat v4.18.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [82899510] + IteratorInterfaceExtensions v1.0.0 ⌅ [682c06a0] + JSON v0.21.4 [b964fa9f] + LaTeXStrings v1.4.0 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.2 [08abe8d2] + PrettyTables v3.2.3 [189a3867] + Reexport v1.2.2 [91c51154] + SentinelArrays v1.4.9 [a2af1166] + SortingAlgorithms v1.2.2 [10745b16] + Statistics v1.11.1 [892a3eda] + StringManipulation v0.4.4 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [d500094b] + TransmissionChannelAnalysis v0.2.0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [6462fe0b] + Sockets v1.11.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.30+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 4.96s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 7559.6 ms ✓ TransmissionChannelAnalysis 1 dependency successfully precompiled in 8 seconds. 44 already precompiled. 9 dependencies precompiled but different versions are currently loaded (Base64, Dates, JuliaSyntaxHighlighting, Logging, Markdown, Printf, StyledStrings, TOML and UUIDs). Restart julia to access the new versions. Otherwise, 15 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompilation completed after 29.79s ################################################################################ # Testing # Testing TransmissionChannelAnalysis Status `/tmp/jl_8BJVQx/Project.toml` [861a8166] Combinatorics v1.1.0 [a93c6f00] DataFrames v1.8.1 ⌅ [682c06a0] JSON v0.21.4 [d500094b] TransmissionChannelAnalysis v0.2.0 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [9e88b42a] Serialization v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_8BJVQx/Manifest.toml` [861a8166] Combinatorics v1.1.0 [34da2185] Compat v4.18.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [842dd82b] InlineStrings v1.4.5 [41ab1584] InvertedIndices v1.3.1 [82899510] IteratorInterfaceExtensions v1.0.0 ⌅ [682c06a0] JSON v0.21.4 [b964fa9f] LaTeXStrings v1.4.0 [e1d29d7a] Missings v1.2.0 [bac558e1] OrderedCollections v1.8.1 [69de0a69] Parsers v2.8.3 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.2 [08abe8d2] PrettyTables v3.2.3 [189a3867] Reexport v1.2.2 [91c51154] SentinelArrays v1.4.9 [a2af1166] SortingAlgorithms v1.2.2 [10745b16] Statistics v1.11.1 [892a3eda] StringManipulation v0.4.4 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [d500094b] TransmissionChannelAnalysis v0.2.0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [f489334b] StyledStrings v1.13.0 [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [4536629a] OpenBLAS_jll v0.3.30+0 [8e850b90] libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Test Summary: | Pass Total Time Utils | 19 19 6.5s Test Summary: | Pass Total Time Representation | 14 14 29.7s [ Info: Using method :BOmega to calculate transmission effect. [ Info: Using method :irfs to calculate transmission effect. create_transmission_function: Test Failed at /home/pkgeval/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:10 Expression: isapprox(mat[:, 1], mat[:, 4]; atol = sqrt(eps())) Evaluated: isapprox([2.1667842882283024, 0.0, -2.9849714175541595, 0.27551276438827765, 0.0, -1.6706139405326756], [4.333568576456605, -2.4339027166510006, -3.812545456127995, 0.5510255287765553, -0.4375062083084245, -2.133786457875311]; atol = 1.4901161193847656e-8) Stacktrace: [1] top-level scope @ ~/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:3 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:10 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] create_transmission_function: Test Failed at /home/pkgeval/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:14 Expression: isapprox(mat[:, 1], mat[:, 4]; atol = sqrt(eps())) Evaluated: isapprox([-2.9849714175541595, 0.27551276438827765, 0.0, -1.6706139405326756], [-3.812545456127995, 0.5510255287765553, -0.4375062083084245, -2.133786457875311]; atol = 1.4901161193847656e-8) Stacktrace: [1] top-level scope @ ~/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:3 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:14 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] [ Info: Using method :BOmega to calculate transmission effect. [ Info: Using method :irfs to calculate transmission effect. create_transmission_function: Test Failed at /home/pkgeval/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:17 Expression: isapprox(mat[:, 1], mat[:, 4]; atol = sqrt(eps())) Evaluated: isapprox([-0.0, -0.0, -2.9849714175541595, -0.0, -0.0, -1.6706139405326756], [-0.0, -0.0, -3.812545456127995, -0.0, -0.0, -2.133786457875311]; atol = 1.4901161193847656e-8) Stacktrace: [1] top-level scope @ ~/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:3 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:17 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] create_transmission_function: Test Failed at /home/pkgeval/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:21 Expression: isapprox(mat[:, 1], mat[:, 4]; atol = sqrt(eps())) Evaluated: isapprox([-0.0, -0.0, -1.6706139405326756], [-0.0, -0.0, -2.133786457875311]; atol = 1.4901161193847656e-8) Stacktrace: [1] top-level scope @ ~/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:3 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:21 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] [ Info: Using method :BOmega to calculate transmission effect. [ Info: Using method :irfs to calculate transmission effect. [ Info: Using method :BOmega to calculate transmission effect. [ Info: Using method :irfs to calculate transmission effect. create_transmission_function: Test Failed at /home/pkgeval/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:31 Expression: isapprox(mat[:, 1], mat[:, 4]; atol = sqrt(eps())) Evaluated: isapprox([-0.0, -2.4339027166510006, -2.9849714175541595, -0.0, -0.43750620830842457, -1.6706139405326759], [-0.0, -4.867805433302001, -1.6551480771476705, -0.0, -0.8750124166168493, -0.9263450346852715]; atol = 1.4901161193847656e-8) Stacktrace: [1] top-level scope @ ~/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:3 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:31 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] create_transmission_function: Test Failed at /home/pkgeval/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:35 Expression: isapprox(mat[:, 1], mat[:, 4]; atol = sqrt(eps())) Evaluated: isapprox([-0.0, -0.43750620830842457, -1.6706139405326759], [-0.0, -0.8750124166168493, -0.9263450346852715]; atol = 1.4901161193847656e-8) Stacktrace: [1] top-level scope @ ~/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:3 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:35 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] [ Info: Using method :BOmega to calculate transmission effect. [ Info: Using method :irfs to calculate transmission effect. create_transmission_function: Test Failed at /home/pkgeval/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:38 Expression: isapprox(mat[:, 1], mat[:, 4]; atol = sqrt(eps())) Evaluated: isapprox([0.0, -2.4339027166510006, 2.1573973789803245, 0.0, -0.43750620830842457, 1.2074414231900399], [0.0, -4.867805433302001, 4.314794757960649, 0.0, -0.875012416616849, 2.4148828463800793]; atol = 1.4901161193847656e-8) Stacktrace: [1] top-level scope @ ~/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:3 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:38 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] create_transmission_function: Test Failed at /home/pkgeval/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:42 Expression: isapprox(mat[:, 1], mat[:, 4]; atol = sqrt(eps())) Evaluated: isapprox([1.2074414231900399], [2.4148828463800793]; atol = 1.4901161193847656e-8) Stacktrace: [1] top-level scope @ ~/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:3 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:42 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] [ Info: Using method :BOmega to calculate transmission effect. [ Info: Using method :irfs to calculate transmission effect. create_transmission_function: Test Failed at /home/pkgeval/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:45 Expression: isapprox(mat[:, 1], mat[:, 4]; atol = sqrt(eps())) Evaluated: isapprox([0.0, -2.4339027166510006, 0.0, 0.0, 0.0, -0.3878029884411187], [0.0, -4.867805433302001, 2.1573973789803245, 0.0, -0.4375062083084246, 0.8196384347489212]; atol = 1.4901161193847656e-8) Stacktrace: [1] top-level scope @ ~/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:3 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:45 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] create_transmission_function: Test Failed at /home/pkgeval/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:48 Expression: isapprox(mat[:, 1], mat[:, 4]; atol = sqrt(eps())) Evaluated: isapprox([-0.3878029884411187], [0.8196384347489212]; atol = 1.4901161193847656e-8) Stacktrace: [1] top-level scope @ ~/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:3 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:48 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] [ Info: Using method :BOmega to calculate transmission effect. [ Info: Using method :irfs to calculate transmission effect. create_transmission_function: Test Failed at /home/pkgeval/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:52 Expression: isapprox(mat[:, 1], mat[:, 4]; atol = sqrt(eps())) Evaluated: isapprox([2.1667842882283024, -2.4339027166510006, -0.8275740385738352, 0.27551276438827765, -0.43750620830842457, -0.46317251734263565], [4.333568576456605, -4.867805433302001, -1.6551480771476703, 0.5510255287765553, -0.8750124166168491, -0.9263450346852713]; atol = 1.4901161193847656e-8) Stacktrace: [1] top-level scope @ ~/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:3 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/transmission-function.jl:52 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] Test Summary: | Pass Fail Total Time TransmissionChannelAnalysis.jl REMOVE_CONTRADICTIONS = true | 71 11 82 44.2s Q constructors | 5 5 0.9s collect_terms | 6 6 1.5s string_and | 5 5 1.7s AND | 7 7 3.3s OR | 10 10 1.2s NOT | 24 24 0.4s create_transmission_function | 14 11 25 35.0s RNG of the outermost testset: Xoshiro(0xcc2b0419d2efbf3b, 0x51a103edcf6d0dfc, 0xc2b1a017f1dfd4b2, 0xc4646d917f7a56b9, 0xed452f5576ee6fb8) ERROR: LoadError: Some tests did not pass: 71 passed, 11 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/TransmissionChannelAnalysis/Ln3jm/test/runtests.jl:23 Testing failed after 100.15s ERROR: LoadError: Package TransmissionChannelAnalysis errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3138 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3003 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:586 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:562 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [12] include(mod::Module, _path::String) @ Base ./Base.jl:323 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:585 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 171.04s: package has test failures