Package evaluation to test SpectralInference on Julia 1.14.0-DEV.1893 (b4aba01002*) started at 2026-03-15T17:05:47.694


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# Set-up
#

Installing PkgEval dependencies (TestEnv)...
  Activating project at `~/.julia/environments/v1.14`

Set-up completed after 14.17s


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# Installation
#

Installing SpectralInference...
   Resolving package versions...
    Updating `~/.julia/environments/v1.14/Project.toml`
  [a959a40c] + SpectralInference v0.4.1
    Updating `~/.julia/environments/v1.14/Manifest.toml`
  [1520ce14] + AbstractTrees v0.4.5
  [66dad0bd] + AliasTables v1.1.3
⌅ [324d7699] + CategoricalArrays v0.10.9
  [aaaa29a8] + Clustering v0.15.8
  [861a8166] + Combinatorics v1.1.0
  [9a962f9c] + DataAPI v1.16.0
  [864edb3b] + DataStructures v0.19.3
  [e2d170a0] + DataValueInterfaces v1.0.0
  [8bb1440f] + DelimitedFiles v1.9.1
  [b4f34e82] + Distances v0.10.12
  [ffbed154] + DocStringExtensions v0.9.5
⌅ [da1fdf0e] + FreqTables v0.4.6
  [41ab1584] + InvertedIndices v1.3.1
  [92d709cd] + IrrationalConstants v0.2.6
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [e1d29d7a] + Missings v1.2.0
  [86f7a689] + NamedArrays v0.10.5
  [b8a86587] + NearestNeighbors v0.4.27
  [bac558e1] + OrderedCollections v1.8.1
  [aea7be01] + PrecompileTools v1.3.3
  [21216c6a] + Preferences v1.5.2
  [43287f4e] + PtrArrays v1.4.0
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [a2af1166] + SortingAlgorithms v1.2.2
  [a959a40c] + SpectralInference v0.4.1
  [90137ffa] + StaticArrays v1.9.18
  [1e83bf80] + StaticArraysCore v1.4.4
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.8.0
  [2913bbd2] + StatsBase v0.34.10
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.1
  [56f22d72] + Artifacts v1.11.0
  [ade2ca70] + Dates v1.11.0
  [9fa8497b] + Future v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [a63ad114] + Mmap v1.11.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v1.0.0
  [9e88b42a] + Serialization v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [fa267f1f] + TOML v1.0.3
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [4536629a] + OpenBLAS_jll v0.3.30+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [8e850b90] + libblastrampoline_jll v5.15.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 4.81s


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# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...
Precompiling packages...
   2632.3 ms  ✓ FreqTables
   1930.2 ms  ✓ NewickTree
   1968.5 ms  ✓ CategoricalArrays → CategoricalArraysRecipesBaseExt
   4732.0 ms  ✓ Clustering
  19980.7 ms  ✓ SpectralInference
   3402.4 ms  ✓ NewickTree → ClusteringExt
  26172.2 ms  ✓ SpectralInference → NewickTreeExt
  7 dependencies successfully precompiled in 62 seconds. 71 already precompiled.
  9 dependencies precompiled but different versions are currently loaded (Base64, Dates, JuliaSyntaxHighlighting, Logging, Markdown, Printf, StyledStrings, TOML and UUIDs). Restart julia to access the new versions. Otherwise, 30 dependents of these packages may trigger further precompilation to work with the unexpected versions.

Precompilation completed after 86.33s


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# Testing
#

     Testing SpectralInference
      Status `/tmp/jl_Vxse6p/Project.toml`
⌅ [324d7699] CategoricalArrays v0.10.9
  [aaaa29a8] Clustering v0.15.8
  [b4f34e82] Distances v0.10.12
  [31c24e10] Distributions v0.25.123
⌅ [da1fdf0e] FreqTables v0.4.6
  [b0a14db8] NewickTree v0.4.0
  [aea7be01] PrecompileTools v1.3.3
  [189a3867] Reexport v1.2.2
  [a959a40c] SpectralInference v0.4.1
  [2913bbd2] StatsBase v0.34.10
  [37e2e46d] LinearAlgebra v1.13.0
  [de0858da] Printf v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_Vxse6p/Manifest.toml`
  [1520ce14] AbstractTrees v0.4.5
  [66dad0bd] AliasTables v1.1.3
⌅ [324d7699] CategoricalArrays v0.10.9
  [aaaa29a8] Clustering v0.15.8
  [861a8166] Combinatorics v1.1.0
  [9a962f9c] DataAPI v1.16.0
  [864edb3b] DataStructures v0.19.3
  [e2d170a0] DataValueInterfaces v1.0.0
  [8bb1440f] DelimitedFiles v1.9.1
  [b4f34e82] Distances v0.10.12
  [31c24e10] Distributions v0.25.123
  [ffbed154] DocStringExtensions v0.9.5
  [1a297f60] FillArrays v1.16.0
⌅ [da1fdf0e] FreqTables v0.4.6
  [34004b35] HypergeometricFunctions v0.3.28
  [41ab1584] InvertedIndices v1.3.1
  [92d709cd] IrrationalConstants v0.2.6
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.7.1
  [2ab3a3ac] LogExpFunctions v0.3.29
  [e1d29d7a] Missings v1.2.0
  [86f7a689] NamedArrays v0.10.5
  [b8a86587] NearestNeighbors v0.4.27
  [b0a14db8] NewickTree v0.4.0
  [bac558e1] OrderedCollections v1.8.1
  [90014a1f] PDMats v0.11.37
  [aea7be01] PrecompileTools v1.3.3
  [21216c6a] Preferences v1.5.2
  [43287f4e] PtrArrays v1.4.0
  [1fd47b50] QuadGK v2.11.2
  [3cdcf5f2] RecipesBase v1.3.4
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [79098fc4] Rmath v0.9.0
  [a2af1166] SortingAlgorithms v1.2.2
  [276daf66] SpecialFunctions v2.7.1
  [a959a40c] SpectralInference v0.4.1
  [90137ffa] StaticArrays v1.9.18
  [1e83bf80] StaticArraysCore v1.4.4
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.8.0
  [2913bbd2] StatsBase v0.34.10
  [4c63d2b9] StatsFuns v1.5.2
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.1
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [f50d1b31] Rmath_jll v0.5.1+0
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [9fa8497b] Future v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.13.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v1.0.0
  [9e88b42a] Serialization v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [f489334b] StyledStrings v1.13.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [4536629a] OpenBLAS_jll v0.3.30+0
  [05823500] OpenLibm_jll v0.8.7+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [8e850b90] libblastrampoline_jll v5.15.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
Test Summary:     | Pass  Total     Time
SpectralInference |   44     44  1m39.6s
     Testing SpectralInference tests passed 

Testing completed after 122.5s

PkgEval succeeded after 239.39s