Package evaluation to test QuantitativeMRI on Julia 1.14.0-DEV.1886 (984ad247db*) started at 2026-03-15T19:20:02.994 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 14.63s ################################################################################ # Installation # Installing QuantitativeMRI... Resolving package versions... Installed Rmath_jll ──────────────── v0.5.1+0 Installed DiffResults ────────────── v1.1.0 Installed DataStructures ─────────── v0.19.3 Installed ConstructionBase ───────── v1.6.0 Installed ForwardDiff ────────────── v1.3.2 Installed Adapt ──────────────────── v4.5.0 Installed FillArrays ─────────────── v1.16.0 Installed MacroTools ─────────────── v0.5.16 Installed AliasTables ────────────── v1.1.3 Installed OrderedCollections ─────── v1.8.1 Installed DataAPI ────────────────── v1.16.0 Installed Compat ─────────────────── v4.18.1 Installed HypergeometricFunctions ── v0.3.28 Installed ArrayInterface ─────────── v7.23.0 Installed StatsBase ──────────────── v0.34.10 Installed Optim ──────────────────── v1.13.3 Installed StatsAPI ───────────────── v1.8.0 Installed PositiveFactorizations ─── v0.2.4 Installed Statistics ─────────────── v1.11.1 Installed IrrationalConstants ────── v0.2.6 Installed CommonSubexpressions ───── v0.3.1 Installed QuadGK ─────────────────── v2.11.2 Installed LsqFit ─────────────────── v0.15.1 Installed OpenSpecFun_jll ────────── v0.5.6+0 Installed StaticArraysCore ───────── v1.4.4 Installed NaNMath ────────────────── v1.1.3 Installed Requires ───────────────── v1.3.1 Installed LogExpFunctions ────────── v0.3.29 Installed DiffRules ──────────────── v1.15.1 Installed Rmath ──────────────────── v0.9.0 Installed FiniteDiff ─────────────── v2.29.0 Installed StatsFuns ──────────────── v1.5.2 Installed EnumX ──────────────────── v1.0.7 Installed PtrArrays ──────────────── v1.4.0 Installed NLSolversBase ──────────── v7.10.0 Installed Reexport ───────────────── v1.2.2 Installed Setfield ───────────────── v1.1.2 Installed QuantitativeMRI ────────── v0.2.0 Installed SpecialFunctions ───────── v2.7.1 Installed Distributions ──────────── v0.25.123 Installed Missings ───────────────── v1.2.0 Installed JLLWrappers ────────────── v1.7.1 Installed EPGsim ─────────────────── v0.1.1 Installed PDMats ─────────────────── v0.11.37 Installed ADTypes ────────────────── v1.21.0 Installed Preferences ────────────── v1.5.2 Installed LineSearches ───────────── v7.5.1 Installed SortingAlgorithms ──────── v1.2.2 Installed DocStringExtensions ────── v0.9.5 Installed DifferentiationInterface ─ v0.7.16 Installing 2 artifacts Installed artifact OpenSpecFun 194.9 KiB Installed artifact Rmath 121.9 KiB Updating `~/.julia/environments/v1.14/Project.toml` [659767e3] + QuantitativeMRI v0.2.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [47edcb42] + ADTypes v1.21.0 [79e6a3ab] + Adapt v4.5.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.23.0 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.18.1 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.3 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.16 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [b6a82cc1] + EPGsim v0.1.1 [4e289a0a] + EnumX v1.0.7 [1a297f60] + FillArrays v1.16.0 [6a86dc24] + FiniteDiff v2.29.0 [f6369f11] + ForwardDiff v1.3.2 [34004b35] + HypergeometricFunctions v0.3.28 [92d709cd] + IrrationalConstants v0.2.6 [692b3bcd] + JLLWrappers v1.7.1 ⌃ [d3d80556] + LineSearches v7.5.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [2fda8390] + LsqFit v0.15.1 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 ⌅ [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 ⌃ [429524aa] + Optim v1.13.3 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 [85a6dd25] + PositiveFactorizations v0.2.4 [21216c6a] + Preferences v1.5.2 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.2 [659767e3] + QuantitativeMRI v0.2.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.7.1 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [9fa8497b] + Future v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.30+0 [05823500] + OpenLibm_jll v0.8.7+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 9.82s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4925.2 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. Precompiling package dependencies... Precompiling packages... 4612.0 ms ✓ MacroTools 829.7 ms ✓ Reexport 1053.8 ms ✓ MappedArrays 1015.8 ms ✓ PositiveFactorizations 956.5 ms ✓ DataAPI 1255.5 ms ✓ Statistics 1348.6 ms ✓ TensorCore 1226.6 ms ✓ ConstructionBase 2323.2 ms ✓ IrrationalConstants 1036.5 ms ✓ StaticArraysCore 974.7 ms ✓ StatsAPI 1352.9 ms ✓ Requires 1526.2 ms ✓ OrderedCollections 913.3 ms ✓ EPGsim 1538.1 ms ✓ ADTypes 1217.0 ms ✓ DocStringExtensions 921.7 ms ✓ EnumX 1712.2 ms ✓ OffsetArrays 2398.9 ms ✓ FillArrays 861.1 ms ✓ PtrArrays 2180.8 ms ✓ PDMats 1126.0 ms ✓ NaNMath 1304.3 ms ✓ Compat 1595.5 ms ✓ Preferences 1897.9 ms ✓ CommonSubexpressions 1044.9 ms ✓ Missings 4357.0 ms ✓ FixedPointNumbers 1615.5 ms ✓ Statistics → SparseArraysExt 886.5 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 972.0 ms ✓ DiffResults 1085.7 ms ✓ Adapt 4004.4 ms ✓ DataStructures 2164.7 ms ✓ DifferentiationInterface 847.8 ms ✓ ADTypes → ADTypesConstructionBaseExt 1543.7 ms ✓ LogExpFunctions 958.4 ms ✓ StackViews 1064.4 ms ✓ PaddedViews 1828.7 ms ✓ FillArrays → FillArraysSparseArraysExt 1166.3 ms ✓ FillArrays → FillArraysStatisticsExt 1105.3 ms ✓ AliasTables 1758.7 ms ✓ FillArrays → FillArraysPDMatsExt 930.5 ms ✓ Compat → CompatLinearAlgebraExt 1684.6 ms ✓ JLLWrappers 1367.6 ms ✓ PrecompileTools 2977.8 ms ✓ ColorTypes 3177.8 ms ✓ Setfield 1305.8 ms ✓ ArrayInterface 1527.1 ms ✓ Adapt → AdaptSparseArraysExt 976.6 ms ✓ OffsetArrays → OffsetArraysAdaptExt 1294.5 ms ✓ SortingAlgorithms 2639.6 ms ✓ QuadGK 1595.5 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseArraysExt 1082.1 ms ✓ PoissonRandom 1130.6 ms ✓ MosaicViews 2512.5 ms ✓ Rmath_jll 2452.6 ms ✓ OpenSpecFun_jll 1438.9 ms ✓ ColorTypes → StyledStringsExt 4300.6 ms ✓ ColorVectorSpace 8668.8 ms ✓ Colors 877.2 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 1549.5 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 5139.7 ms ✓ StatsBase 2045.9 ms ✓ Rmath 5774.5 ms ✓ SpecialFunctions 34115.2 ms ✓ ImageCore 1528.8 ms ✓ FiniteDiff 1726.9 ms ✓ PDMats → StatsBaseExt 2858.0 ms ✓ HypergeometricFunctions 1422.5 ms ✓ DiffRules 1919.0 ms ✓ ColorVectorSpace → SpecialFunctionsExt 4168.4 ms ✓ Noise 1595.2 ms ✓ FiniteDiff → FiniteDiffSparseArraysExt 1136.6 ms ✓ DifferentiationInterface → DifferentiationInterfaceFiniteDiffExt 3673.1 ms ✓ StatsFuns 7898.8 ms ✓ ForwardDiff 10451.6 ms ✓ Distributions 1825.1 ms ✓ DifferentiationInterface → DifferentiationInterfaceForwardDiffExt 4042.9 ms ✓ Distributions → DistributionsTestExt 2288.8 ms ✓ NLSolversBase 2821.1 ms ✓ LineSearches 3841.3 ms ✓ LsqFit 6857.2 ms ✓ Optim 3587.1 ms ✓ QuantitativeMRI 83 dependencies successfully precompiled in 218 seconds. 19 already precompiled. Precompilation completed after 248.25s ################################################################################ # Testing # Testing QuantitativeMRI Status `/tmp/jl_jta1nB/Project.toml` [b6a82cc1] EPGsim v0.1.1 [2fda8390] LsqFit v0.15.1 [81d43f40] Noise v0.3.3 ⌃ [429524aa] Optim v1.13.3 [659767e3] QuantitativeMRI v0.2.0 [10745b16] Statistics v1.11.1 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_jta1nB/Manifest.toml` [47edcb42] ADTypes v1.21.0 [79e6a3ab] Adapt v4.5.0 [66dad0bd] AliasTables v1.1.3 [4fba245c] ArrayInterface v7.23.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [187b0558] ConstructionBase v1.6.0 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.3 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.16 [31c24e10] Distributions v0.25.123 [ffbed154] DocStringExtensions v0.9.5 [b6a82cc1] EPGsim v0.1.1 [4e289a0a] EnumX v1.0.7 [1a297f60] FillArrays v1.16.0 [6a86dc24] FiniteDiff v2.29.0 [53c48c17] FixedPointNumbers v0.8.5 [f6369f11] ForwardDiff v1.3.2 [34004b35] HypergeometricFunctions v0.3.28 [a09fc81d] ImageCore v0.10.5 [92d709cd] IrrationalConstants v0.2.6 [692b3bcd] JLLWrappers v1.7.1 ⌃ [d3d80556] LineSearches v7.5.1 [2ab3a3ac] LogExpFunctions v0.3.29 [2fda8390] LsqFit v0.15.1 [1914dd2f] MacroTools v0.5.16 [dbb5928d] MappedArrays v0.4.3 [e1d29d7a] Missings v1.2.0 [e94cdb99] MosaicViews v0.3.4 ⌅ [d41bc354] NLSolversBase v7.10.0 [77ba4419] NaNMath v1.1.3 [81d43f40] Noise v0.3.3 [6fe1bfb0] OffsetArrays v1.17.0 ⌃ [429524aa] Optim v1.13.3 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.37 [5432bcbf] PaddedViews v0.5.12 [e409e4f3] PoissonRandom v0.4.7 [85a6dd25] PositiveFactorizations v0.2.4 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.2 [43287f4e] PtrArrays v1.4.0 [1fd47b50] QuadGK v2.11.2 [659767e3] QuantitativeMRI v0.2.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [efcf1570] Setfield v1.1.2 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.7.1 [cae243ae] StackViews v0.1.2 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.10 [4c63d2b9] StatsFuns v1.5.2 [62fd8b95] TensorCore v0.1.1 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [4536629a] OpenBLAS_jll v0.3.30+0 [05823500] OpenLibm_jll v0.8.7+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [8e850b90] libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... [ Info: T2Fit [ Info: T2Fit + remove [ Info: T2Fit_ExpNoise [ Info: T2Fit_EpgNoise T2Fit EPG: Test Failed at /home/pkgeval/.julia/packages/QuantitativeMRI/BAK18/test/runtests.jl:69 Expression: (abs(fit_param[1, 1, 1, 1]) - M0) / M0 < 0.05 Evaluated: 0.06484418451367162 < 0.05 Stacktrace: [1] top-level scope @ ~/.julia/packages/QuantitativeMRI/BAK18/test/runtests.jl:7 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/QuantitativeMRI/BAK18/test/runtests.jl:46 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [5] macro expansion @ ~/.julia/packages/QuantitativeMRI/BAK18/test/runtests.jl:69 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] Test Summary: | Pass Fail Total Time QuantitativeMRI.jl | 10 1 11 1m56.8s T2Fit | 3 3 30.5s T2Fit EPG | 3 1 4 39.8s MP2RAGE | 4 4 46.4s RNG of the outermost testset: Xoshiro(0xe52802e6a85f624c, 0xd19541f75a2c3dc0, 0xfc483ea821a19e9b, 0xd103152bda9b5c42, 0xfe669648594bba61) ERROR: LoadError: Some tests did not pass: 10 passed, 1 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/QuantitativeMRI/BAK18/test/runtests.jl:6 Testing failed after 136.58s ERROR: LoadError: Package QuantitativeMRI errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3138 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3003 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:586 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:562 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [12] include(mod::Module, _path::String) @ Base ./Base.jl:323 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:585 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 428.27s: package has test failures