Package evaluation to test MCMCTempering on Julia 1.14.0-DEV.1893 (b4aba01002*) started at 2026-03-15T22:35:02.566 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 14.83s ################################################################################ # Installation # Installing MCMCTempering... Resolving package versions... Installed CompositionsBase ──────────── v0.1.2 Installed MacroTools ────────────────── v0.5.16 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed DataStructures ────────────── v0.19.3 Installed MicroCollections ──────────── v0.1.4 Installed MCMCTempering ─────────────── v0.3.2 Installed AbstractTrees ─────────────── v0.4.5 Installed FillArrays ────────────────── v1.16.0 Installed ConstructionBase ──────────── v1.6.0 Installed DefineSingletons ──────────── v0.1.2 Installed FFTA ──────────────────────── v0.3.1 Installed OrderedCollections ────────── v1.8.1 Installed AliasTables ───────────────── v1.1.3 Installed Adapt ─────────────────────── v4.5.0 Installed HypergeometricFunctions ───── v0.3.28 Installed StatsBase ─────────────────── v0.34.10 Installed KernelDensity ─────────────── v0.6.11 Installed Compat ────────────────────── v4.18.1 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed RecipesBase ───────────────── v1.3.4 Installed DataAPI ───────────────────── v1.16.0 Installed StatsAPI ──────────────────── v1.8.0 Installed DataValueInterfaces ───────── v1.0.0 Installed ProgressLogging ───────────── v0.1.6 Installed Statistics ────────────────── v1.11.1 Installed InitialValues ─────────────── v0.3.1 Installed PrecompileTools ───────────── v1.3.3 Installed OffsetArrays ──────────────── v1.17.0 Installed StaticArraysCore ──────────── v1.4.4 Installed ConsoleProgressMonitor ────── v0.1.2 Installed MCMCDiagnosticTools ───────── v0.3.16 Installed StaticArrays ──────────────── v1.9.18 Installed LoggingExtras ─────────────── v1.2.0 Installed ConcreteStructs ───────────── v0.2.3 Installed ArgCheck ──────────────────── v2.5.0 Installed ProgressMeter ─────────────── v1.11.0 Installed LogDensityProblems ────────── v2.2.0 Installed ChainRulesCore ────────────── v1.26.0 Installed IrrationalConstants ───────── v0.2.6 Installed AxisAlgorithms ────────────── v1.1.0 Installed AbstractFFTs ──────────────── v1.5.0 Installed QuadGK ────────────────────── v2.11.2 Installed IntegerMathUtils ──────────── v0.1.3 Installed Ratios ────────────────────── v0.4.5 Installed TerminalLoggers ───────────── v0.1.7 Installed BangBang ──────────────────── v0.3.40 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed LogExpFunctions ───────────── v0.3.29 Installed Rmath ─────────────────────── v0.9.0 Installed LeftChildRightSiblingTrees ── v0.2.1 Installed StringManipulation ────────── v0.4.4 Installed Requires ──────────────────── v1.3.1 Installed SplittablesBase ───────────── v0.1.15 Installed WoodburyMatrices ──────────── v1.1.0 Installed StatsFuns ─────────────────── v1.5.2 Installed MuladdMacro ───────────────── v0.2.4 Installed Transducers ───────────────── v0.4.80 Installed PrettyTables ──────────────── v2.4.0 Installed Distributions ─────────────── v0.25.123 Installed Interpolations ────────────── v0.16.2 Installed Tables ────────────────────── v1.12.1 Installed Reexport ──────────────────── v1.2.2 Installed SpecialFunctions ──────────── v2.7.1 Installed InverseFunctions ──────────── v0.1.17 Installed PtrArrays ─────────────────── v1.4.0 Installed AbstractMCMC ──────────────── v4.4.2 Installed IntervalSets ──────────────── v0.7.13 Installed Missings ──────────────────── v1.2.0 Installed Setfield ──────────────────── v1.1.2 Installed Baselet ───────────────────── v0.1.1 Installed JLLWrappers ───────────────── v1.7.1 Installed ScientificTypesBase ───────── v3.1.0 Installed LaTeXStrings ──────────────── v1.4.0 Installed TableTraits ───────────────── v1.0.1 Installed SortingAlgorithms ─────────── v1.2.2 Installed Crayons ───────────────────── v4.1.1 Installed PDMats ────────────────────── v0.11.37 Installed RangeArrays ───────────────── v0.3.2 Installed IterTools ─────────────────── v1.10.0 Installed MCMCChains ────────────────── v6.0.7 Installed Preferences ───────────────── v1.5.2 Installed Primes ────────────────────── v0.5.7 Installed AxisArrays ────────────────── v0.4.8 Installed DocStringExtensions ───────── v0.9.5 Installed NaturalSort ───────────────── v1.0.0 Installed StatisticalTraits ─────────── v3.5.0 Installed MLJModelInterface ─────────── v1.12.1 Installing 2 artifacts Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Updating `~/.julia/environments/v1.14/Project.toml` [ce233488] + MCMCTempering v0.3.2 Updating `~/.julia/environments/v1.14/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 ⌅ [80f14c24] + AbstractMCMC v4.4.2 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.5.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.8 ⌅ [198e06fe] + BangBang v0.3.40 [9718e550] + Baselet v0.1.1 [d360d2e6] + ChainRulesCore v1.26.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [88cd18e8] + ConsoleProgressMonitor v0.1.2 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [b86e33f2] + FFTA v0.3.1 [1a297f60] + FillArrays v1.16.0 [34004b35] + HypergeometricFunctions v0.3.28 [22cec73e] + InitialValues v0.3.1 [18e54dd8] + IntegerMathUtils v0.1.3 [a98d9a8b] + Interpolations v0.16.2 [8197267c] + IntervalSets v0.7.13 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [5ab0869b] + KernelDensity v0.6.11 [b964fa9f] + LaTeXStrings v1.4.0 [1d6d02ad] + LeftChildRightSiblingTrees v0.2.1 [6fdf6af0] + LogDensityProblems v2.2.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 ⌅ [c7f686f2] + MCMCChains v6.0.7 [be115224] + MCMCDiagnosticTools v0.3.16 [ce233488] + MCMCTempering v0.3.2 [e80e1ace] + MLJModelInterface v1.12.1 [1914dd2f] + MacroTools v0.5.16 ⌅ [128add7d] + MicroCollections v0.1.4 [e1d29d7a] + Missings v1.2.0 [46d2c3a1] + MuladdMacro v0.2.4 [c020b1a1] + NaturalSort v1.0.0 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.2 ⌅ [08abe8d2] + PrettyTables v2.4.0 [27ebfcd6] + Primes v0.5.7 [33c8b6b6] + ProgressLogging v0.1.6 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.2 [b3c3ace0] + RangeArrays v0.3.2 [c84ed2f1] + Ratios v0.4.5 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [30f210dd] + ScientificTypesBase v3.1.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.7.1 [171d559e] + SplittablesBase v0.1.15 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 [64bff920] + StatisticalTraits v3.5.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [892a3eda] + StringManipulation v0.4.4 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [5d786b92] + TerminalLoggers v0.1.7 ⌃ [28d57a85] + Transducers v0.4.80 [efce3f68] + WoodburyMatrices v1.1.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.30+0 [05823500] + OpenLibm_jll v0.8.7+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 10.19s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4824.2 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. 26 dependencies precompiled but different versions are currently loaded (ArgTools, Base64, Dates, Downloads, JuliaSyntaxHighlighting, LibCURL, LibCURL_jll, LibGit2, LibGit2_jll, LibSSH2_jll, Logging, Markdown, MozillaCACerts_jll, NetworkOptions, OpenSSL_jll, PCRE2_jll, Pkg, Printf, StyledStrings, TOML, Tar, UUIDs, Zlib_jll, Zstd_jll, nghttp2_jll and p7zip_jll). Restart julia to access the new versions. Otherwise, 1 dependent of these packages may trigger further precompilation to work with the unexpected versions. ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/RUPmD/src/julia-1.13/activate_set.jl:78 Precompiling package dependencies... Precompiling packages... 4869.8 ms ✓ MacroTools 1743.8 ms ✓ InlineStrings 825.5 ms ✓ Reexport 1103.3 ms ✓ MappedArrays 1277.5 ms ✓ ConstructionBase 2329.8 ms ✓ IrrationalConstants 952.4 ms ✓ ChangesOfVariables 797.3 ms ✓ DataValueInterfaces 902.5 ms ✓ StatsAPI 1216.7 ms ✓ IterTools 1126.3 ms ✓ IntervalSets 1004.6 ms ✓ Functors 2210.2 ms ✓ Combinatorics 947.9 ms ✓ ArgCheck 808.9 ms ✓ CommonSolve 906.6 ms ✓ LaTeXStrings 2628.5 ms ✓ Baselet 1212.2 ms ✓ Statistics 1052.9 ms ✓ Tricks 1045.3 ms ✓ StaticArraysCore 1130.7 ms ✓ LRUCache 846.1 ms ✓ PtrArrays 786.1 ms ✓ NaturalSort 888.3 ms ✓ DataAPI 825.7 ms ✓ RealDot 3612.6 ms ✓ UnsafeAtomics 1703.6 ms ✓ RandomNumbers 881.1 ms ✓ InvertedIndices 971.6 ms ✓ InverseFunctions 875.8 ms ✓ CompositionsBase 1173.9 ms ✓ AbstractTrees 862.8 ms ✓ SimpleUnPack 1688.7 ms ✓ InitialValues 861.8 ms ✓ MuladdMacro 1105.0 ms ✓ AbstractFFTs 941.8 ms ✓ EnumX 2421.4 ms ✓ FillArrays 916.7 ms ✓ IntegerMathUtils 966.1 ms ✓ ExprTools 881.6 ms ✓ ConcreteStructs 899.0 ms ✓ RangeArrays 1434.1 ms ✓ OrderedCollections 1437.1 ms ✓ FunctionWrappers 986.2 ms ✓ HashArrayMappedTries 1160.1 ms ✓ DocStringExtensions 859.3 ms ✓ DefineSingletons 1815.7 ms ✓ OffsetArrays 782.9 ms ✓ IteratorInterfaceExtensions 1944.4 ms ✓ Crayons 1012.5 ms ✓ DelimitedFiles 1096.6 ms ✓ NaNMath 2158.8 ms ✓ PDMats 1467.3 ms ✓ SparseInverseSubset 1564.8 ms ✓ WoodburyMatrices 1141.7 ms ✓ ProgressLogging 1829.3 ms ✓ ProgressMeter 1253.4 ms ✓ Requires 2537.0 ms ✓ SentinelArrays 1480.8 ms ✓ LoggingExtras 1235.9 ms ✓ Compat 1475.9 ms ✓ Preferences 1410.5 ms ✓ ScientificTypesBase 841.3 ms ✓ InplaceOps 5971.2 ms ✓ Lazy 1814.5 ms ✓ CommonSubexpressions 887.4 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 4401.9 ms ✓ ChangesOfVariables → ChangesOfVariablesTestExt 830.1 ms ✓ IntervalSets → IntervalSetsRandomExt 817.1 ms ✓ ConstructionBase → ConstructionBaseIntervalSetsExt 1537.0 ms ✓ Statistics → SparseArraysExt 819.1 ms ✓ IntervalSets → IntervalSetsStatisticsExt 942.8 ms ✓ DiffResults 825.9 ms ✓ LRUCache → SerializationExt 1024.1 ms ✓ AliasTables 1005.8 ms ✓ Missings 1072.6 ms ✓ PooledArrays 1070.6 ms ✓ Atomix 1964.8 ms ✓ Random123 1284.0 ms ✓ InverseFunctions → InverseFunctionsDatesExt 1724.5 ms ✓ InverseFunctions → InverseFunctionsTestExt 905.2 ms ✓ ChangesOfVariables → ChangesOfVariablesInverseFunctionsExt 845.6 ms ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 915.4 ms ✓ LeftChildRightSiblingTrees 4378.5 ms ✓ AbstractFFTs → AbstractFFTsTestExt 1726.6 ms ✓ FillArrays → FillArraysSparseArraysExt 1063.3 ms ✓ FillArrays → FillArraysStatisticsExt 1286.0 ms ✓ Primes 1014.7 ms ✓ RuntimeGeneratedFunctions 822.5 ms ✓ FunctionWrappersWrappers 1496.5 ms ✓ Libtask 943.0 ms ✓ ScopedValues 1386.9 ms ✓ LogExpFunctions 1215.4 ms ✓ SymbolicIndexingInterface 2023.0 ms ✓ LogDensityProblems 825.3 ms ✓ TableTraits 1628.0 ms ✓ FillArrays → FillArraysPDMatsExt 1554.8 ms ✓ AxisAlgorithms 994.0 ms ✓ ConsoleProgressMonitor 883.8 ms ✓ Ratios 1031.7 ms ✓ Adapt 895.7 ms ✓ Compat → CompatLinearAlgebraExt 1248.5 ms ✓ PrecompileTools 1585.4 ms ✓ JLLWrappers 2323.9 ms ✓ TruncatedStacktraces 1345.8 ms ✓ StatisticalTraits 3010.9 ms ✓ Setfield 1986.2 ms ✓ AxisArrays 1789.6 ms ✓ DensityInterface 5614.9 ms ✓ Accessors 1885.6 ms ✓ TerminalLoggers 2623.3 ms ✓ FFTA 846.0 ms ✓ LogExpFunctions → LogExpFunctionsChangesOfVariablesExt 838.8 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 1137.6 ms ✓ LogDensityProblemsAD 1947.5 ms ✓ Tables 1891.8 ms ✓ ArrayInterface 1282.1 ms ✓ GPUArraysCore 883.9 ms ✓ OffsetArrays → OffsetArraysAdaptExt 2840.4 ms ✓ ChainRulesCore 4143.2 ms ✓ DataStructures 4198.0 ms ✓ StringManipulation 15357.2 ms ✓ StaticArrays 3819.2 ms ✓ RecipesBase 2354.9 ms ✓ Rmath_jll 2377.8 ms ✓ OpenSpecFun_jll 3684.9 ms ✓ MLJModelInterface 3745.2 ms ✓ SplittablesBase 2218.3 ms ✓ Accessors → TestExt 3010.5 ms ✓ Accessors → IntervalSetsExt 2907.6 ms ✓ Accessors → LinearAlgebraExt 1752.0 ms ✓ StructArrays 1744.0 ms ✓ BangBang 1376.4 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 1442.8 ms ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt 1501.5 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 2238.9 ms ✓ Optimisers 2537.2 ms ✓ ZygoteRules 965.9 ms ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 3527.9 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 1655.7 ms ✓ SortingAlgorithms 3019.1 ms ✓ QuadGK WARNING: Imported binding Base._sortslices was undeclared at import time during import to NamedArrays. WARNING: Imported binding Base._negdims was undeclared at import time during import to NamedArrays. WARNING: Imported binding Base.DimSelector was undeclared at import time during import to NamedArrays. ERROR: LoadError: invalid method definition in NamedArrays: exported function Base._sortslices does not exist Stacktrace:  [1] top-level scope  @ ~/.julia/packages/NamedArrays/spYk1/src/rearrange.jl:106  [2] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:324  [3] top-level scope  @ ~/.julia/packages/NamedArrays/spYk1/src/NamedArrays.jl:35  [4] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [5] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3289  [6] top-level scope  @ stdin:5  [7] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3131  [9] include_string  @ ./loading.jl:3141 [inlined]  [10] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [11] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/NamedArrays/spYk1/src/rearrange.jl:106 in expression starting at /home/pkgeval/.julia/packages/NamedArrays/spYk1/src/NamedArrays.jl:9 in expression starting at stdin:5 ✗ NamedArrays 29589.0 ms ✓ PrettyTables 1947.0 ms ✓ StaticArrays → StaticArraysStatisticsExt 2057.7 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1963.8 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 2194.1 ms ✓ FillArrays → FillArraysStaticArraysExt 2013.7 ms ✓ Adapt → AdaptStaticArraysExt 2155.4 ms ✓ Accessors → StaticArraysExt 1788.2 ms ✓ IntervalSets → IntervalSetsRecipesBaseExt 2062.5 ms ✓ Rmath 5586.1 ms ✓ SpecialFunctions 8044.5 ms ✓ Roots 1274.3 ms ✓ StructArrays → StructArraysSparseArraysExt 916.4 ms ✓ StructArrays → StructArraysGPUArraysCoreExt 954.9 ms ✓ StructArrays → StructArraysAdaptExt 2055.5 ms ✓ StructArrays → StructArraysStaticArraysExt 1674.2 ms ✓ Accessors → StructArraysExt 2180.5 ms ✓ MicroCollections 1198.4 ms ✓ BangBang → BangBangChainRulesCoreExt 1188.4 ms ✓ BangBang → BangBangStructArraysExt 2015.2 ms ✓ BangBang → BangBangStaticArraysExt 4753.5 ms ✓ SciMLOperators 3950.2 ms ✓ RecursiveArrayTools 5352.1 ms ✓ StatsBase 77420.6 ms ✓ DataFrames 9902.1 ms ✓ KernelAbstractions 4893.0 ms ✓ Interpolations 4813.0 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 2761.0 ms ✓ HypergeometricFunctions 1403.3 ms ✓ DiffRules 1573.2 ms ✓ Roots → RootsChainRulesCoreExt 12934.3 ms ✓ ChainRules 7972.8 ms ✓ Transducers 12998.1 ms ✓ SciMLBase 6536.2 ms ✓ BangBang → BangBangDataFramesExt 3430.5 ms ✓ KernelAbstractions → SparseArraysExt 2598.7 ms ✓ KernelAbstractions → LinearAlgebraExt 3453.5 ms ✓ StatsFuns 8295.0 ms ✓ ForwardDiff 6756.8 ms ✓ Transducers → TransducersDataFramesExt 5374.0 ms ✓ AbstractMCMC 15058.0 ms ✓ NNlib 4020.0 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 1398.3 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 10528.8 ms ✓ Distributions 2457.1 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 2043.4 ms ✓ LogDensityProblemsAD → LogDensityProblemsADForwardDiffExt 1696.2 ms ✓ Roots → RootsForwardDiffExt 3135.1 ms ✓ Interpolations → InterpolationsForwardDiffExt 7315.4 ms ✓ AdvancedHMC 4524.0 ms ✓ AbstractPPL 2884.9 ms ✓ NNlib → NNlibSpecialFunctionsExt 3107.9 ms ✓ NNlib → NNlibForwardDiffExt 4216.3 ms ✓ Distributions → DistributionsTestExt 3758.7 ms ✓ Distributions → DistributionsDensityInterfaceExt 4210.1 ms ✓ Distributions → DistributionsChainRulesCoreExt 5588.8 ms ✓ MCMCDiagnosticTools 13750.3 ms ✓ Tracker 4949.6 ms ✓ AdvancedPS 4571.6 ms ✓ AdvancedMH 4338.9 ms ✓ EllipticalSliceSampling 5028.3 ms ✓ KernelDensity 9338.5 ms ✓ Bijectors 10074.7 ms ✓ DistributionsAD 4081.4 ms ✓ Tracker → TrackerPDMatsExt 3609.8 ms ✓ LogDensityProblemsAD → LogDensityProblemsADTrackerExt 4066.9 ms ✓ ArrayInterface → ArrayInterfaceTrackerExt 4112.6 ms ✓ RecursiveArrayTools → RecursiveArrayToolsTrackerExt 4092.8 ms ✓ AdvancedMH → AdvancedMHStructArraysExt 4093.2 ms ✓ AdvancedMH → AdvancedMHForwardDiffExt 9590.9 ms ✓ MCMCChains 22852.7 ms ✓ DynamicPPL 3869.6 ms ✓ DistributionsAD → DistributionsADForwardDiffExt 8076.3 ms ✓ DistributionsAD → DistributionsADTrackerExt 14341.7 ms ✓ MCMCTempering 7303.3 ms ✓ AdvancedHMC → AdvancedHMCMCMCChainsExt 7403.8 ms ✓ AdvancedMH → AdvancedMHMCMCChainsExt 6231.2 ms ✓ AdvancedVI 12416.6 ms ✓ Turing 219 dependencies successfully precompiled in 755 seconds. 22 already precompiled. 9 dependencies precompiled but different versions are currently loaded (Base64, Dates, JuliaSyntaxHighlighting, Logging, Markdown, Printf, StyledStrings, TOML and UUIDs). Restart julia to access the new versions. Otherwise, 132 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompilation completed after 788.0s ################################################################################ # Testing # Testing MCMCTempering Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_qBFG1T/Project.toml` ⌅ [0bf59076] + AdvancedHMC v0.4.6 ⌅ [5b7e9947] + AdvancedMH v0.7.5 ⌅ [76274a88] + Bijectors v0.10.8 [a93c6f00] + DataFrames v1.8.1 ⌅ [f6369f11] + ForwardDiff v0.10.39 [996a588d] + LogDensityProblemsAD v1.13.1 ⌃ [be115224] ↓ MCMCDiagnosticTools v0.3.16 ⇒ v0.3.15 [ce233488] + MCMCTempering v0.3.2 ⌅ [fce5fe82] + Turing v0.24.4 Updating `/tmp/jl_qBFG1T/Manifest.toml` ⌅ [7a57a42e] + AbstractPPL v0.5.4 [7d9f7c33] + Accessors v0.1.43 ⌅ [79e6a3ab] ↓ Adapt v4.5.0 ⇒ v3.7.2 ⌅ [0bf59076] + AdvancedHMC v0.4.6 ⌅ [5b7e9947] + AdvancedMH v0.7.5 ⌅ [576499cb] + AdvancedPS v0.4.3 ⌅ [b5ca4192] + AdvancedVI v0.1.6 ⌃ [4fba245c] + ArrayInterface v7.7.1 [a9b6321e] + Atomix v1.1.2 ⌅ [76274a88] + Bijectors v0.10.8 [082447d4] + ChainRules v1.73.0 [9e997f8a] + ChangesOfVariables v0.1.10 [861a8166] + Combinatorics v1.1.0 [38540f10] + CommonSolve v0.2.6 [bbf7d656] + CommonSubexpressions v0.3.1 [2569d6c7] + ConcreteStructs v0.2.3 [a93c6f00] + DataFrames v1.8.1 ⌅ [864edb3b] ↓ DataStructures v0.19.3 ⇒ v0.18.22 [8bb1440f] + DelimitedFiles v1.9.1 [b429d917] + DensityInterface v0.4.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [ced4e74d] + DistributionsAD v0.6.58 ⌅ [366bfd00] + DynamicPPL v0.21.6 ⌅ [cad2338a] + EllipticalSliceSampling v1.1.0 [4e289a0a] + EnumX v1.0.7 [e2ba6199] + ExprTools v0.1.10 ⌅ [f6369f11] + ForwardDiff v0.10.39 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 ⌅ [d9f16b24] + Functors v0.3.0 ⌅ [46192b85] + GPUArraysCore v0.1.5 [076d061b] + HashArrayMappedTries v0.2.0 [842dd82b] + InlineStrings v1.4.5 [505f98c9] + InplaceOps v0.3.0 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [63c18a36] + KernelAbstractions v0.9.40 [8ac3fa9e] + LRUCache v1.6.2 [50d2b5c4] + Lazy v0.15.1 ⌅ [6f1fad26] + Libtask v0.8.8 [996a588d] + LogDensityProblemsAD v1.13.1 ⌃ [be115224] ↓ MCMCDiagnosticTools v0.3.16 ⇒ v0.3.15 [ce233488] + MCMCTempering v0.3.2 [dbb5928d] + MappedArrays v0.4.3 ⌃ [872c559c] + NNlib v0.9.31 [77ba4419] + NaNMath v1.1.3 ⌅ [86f7a689] + NamedArrays v0.9.8 ⌃ [3bd65402] + Optimisers v0.2.15 ⌃ [90014a1f] ↓ PDMats v0.11.37 ⇒ v0.11.35 [2dfb63ee] + PooledArrays v1.4.3 [74087812] + Random123 v1.7.1 [e6cf234a] + RandomNumbers v1.6.0 [c1ae055f] + RealDot v0.1.0 ⌅ [731186ca] + RecursiveArrayTools v2.38.10 [f2b01f46] + Roots v2.2.13 [7e49a35a] + RuntimeGeneratedFunctions v0.5.17 ⌅ [0bca4576] + SciMLBase v1.92.0 ⌅ [c0aeaf25] + SciMLOperators v0.2.12 [7e506255] + ScopedValues v1.6.0 [91c51154] + SentinelArrays v1.4.9 [ce78b400] + SimpleUnPack v1.1.0 [dc90abb0] + SparseInverseSubset v0.1.2 ⌅ [2913bbd2] ↓ StatsBase v0.34.10 ⇒ v0.33.21 ⌃ [09ab397b] + StructArrays v0.6.18 ⌅ [2efcf032] + SymbolicIndexingInterface v0.2.2 [9f7883ad] + Tracker v0.2.38 [410a4b4d] + Tricks v0.1.13 [781d530d] + TruncatedStacktraces v1.4.0 ⌅ [fce5fe82] + Turing v0.24.4 [013be700] + UnsafeAtomics v0.3.0 [700de1a5] + ZygoteRules v0.2.7 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_qBFG1T/Project.toml` ⌅ [80f14c24] AbstractMCMC v4.4.2 ⌅ [0bf59076] AdvancedHMC v0.4.6 ⌅ [5b7e9947] AdvancedMH v0.7.5 ⌅ [76274a88] Bijectors v0.10.8 [a93c6f00] DataFrames v1.8.1 [31c24e10] Distributions v0.25.123 [1a297f60] FillArrays v1.16.0 ⌅ [f6369f11] ForwardDiff v0.10.39 [6fdf6af0] LogDensityProblems v2.2.0 [996a588d] LogDensityProblemsAD v1.13.1 ⌅ [c7f686f2] MCMCChains v6.0.7 ⌃ [be115224] MCMCDiagnosticTools v0.3.15 [ce233488] MCMCTempering v0.3.2 [efcf1570] Setfield v1.1.2 [10745b16] Statistics v1.11.1 ⌅ [fce5fe82] Turing v0.24.4 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_qBFG1T/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 ⌅ [80f14c24] AbstractMCMC v4.4.2 ⌅ [7a57a42e] AbstractPPL v0.5.4 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.43 ⌅ [79e6a3ab] Adapt v3.7.2 ⌅ [0bf59076] AdvancedHMC v0.4.6 ⌅ [5b7e9947] AdvancedMH v0.7.5 ⌅ [576499cb] AdvancedPS v0.4.3 ⌅ [b5ca4192] AdvancedVI v0.1.6 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 ⌃ [4fba245c] ArrayInterface v7.7.1 [a9b6321e] Atomix v1.1.2 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.8 ⌅ [198e06fe] BangBang v0.3.40 [9718e550] Baselet v0.1.1 ⌅ [76274a88] Bijectors v0.10.8 [082447d4] ChainRules v1.73.0 [d360d2e6] ChainRulesCore v1.26.0 [9e997f8a] ChangesOfVariables v0.1.10 [861a8166] Combinatorics v1.1.0 [38540f10] CommonSolve v0.2.6 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [88cd18e8] ConsoleProgressMonitor v0.1.2 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [244e2a9f] DefineSingletons v0.1.2 [8bb1440f] DelimitedFiles v1.9.1 [b429d917] DensityInterface v0.4.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [31c24e10] Distributions v0.25.123 [ced4e74d] DistributionsAD v0.6.58 [ffbed154] DocStringExtensions v0.9.5 ⌅ [366bfd00] DynamicPPL v0.21.6 ⌅ [cad2338a] EllipticalSliceSampling v1.1.0 [4e289a0a] EnumX v1.0.7 [e2ba6199] ExprTools v0.1.10 [b86e33f2] FFTA v0.3.1 [1a297f60] FillArrays v1.16.0 ⌅ [f6369f11] ForwardDiff v0.10.39 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 ⌅ [d9f16b24] Functors v0.3.0 ⌅ [46192b85] GPUArraysCore v0.1.5 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [22cec73e] InitialValues v0.3.1 [842dd82b] InlineStrings v1.4.5 [505f98c9] InplaceOps v0.3.0 [18e54dd8] IntegerMathUtils v0.1.3 [a98d9a8b] Interpolations v0.16.2 [8197267c] IntervalSets v0.7.13 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [63c18a36] KernelAbstractions v0.9.40 [5ab0869b] KernelDensity v0.6.11 [8ac3fa9e] LRUCache v1.6.2 [b964fa9f] LaTeXStrings v1.4.0 [50d2b5c4] Lazy v0.15.1 [1d6d02ad] LeftChildRightSiblingTrees v0.2.1 ⌅ [6f1fad26] Libtask v0.8.8 [6fdf6af0] LogDensityProblems v2.2.0 [996a588d] LogDensityProblemsAD v1.13.1 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 ⌅ [c7f686f2] MCMCChains v6.0.7 ⌃ [be115224] MCMCDiagnosticTools v0.3.15 [ce233488] MCMCTempering v0.3.2 [e80e1ace] MLJModelInterface v1.12.1 [1914dd2f] MacroTools v0.5.16 [dbb5928d] MappedArrays v0.4.3 ⌅ [128add7d] MicroCollections v0.1.4 [e1d29d7a] Missings v1.2.0 [46d2c3a1] MuladdMacro v0.2.4 ⌃ [872c559c] NNlib v0.9.31 [77ba4419] NaNMath v1.1.3 ⌅ [86f7a689] NamedArrays v0.9.8 [c020b1a1] NaturalSort v1.0.0 [6fe1bfb0] OffsetArrays v1.17.0 ⌃ [3bd65402] Optimisers v0.2.15 [bac558e1] OrderedCollections v1.8.1 ⌃ [90014a1f] PDMats v0.11.35 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.2 ⌅ [08abe8d2] PrettyTables v2.4.0 [27ebfcd6] Primes v0.5.7 [33c8b6b6] ProgressLogging v0.1.6 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.4.0 [1fd47b50] QuadGK v2.11.2 [74087812] Random123 v1.7.1 [e6cf234a] RandomNumbers v1.6.0 [b3c3ace0] RangeArrays v0.3.2 [c84ed2f1] Ratios v0.4.5 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 ⌅ [731186ca] RecursiveArrayTools v2.38.10 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [f2b01f46] Roots v2.2.13 [7e49a35a] RuntimeGeneratedFunctions v0.5.17 ⌅ [0bca4576] SciMLBase v1.92.0 ⌅ [c0aeaf25] SciMLOperators v0.2.12 [30f210dd] ScientificTypesBase v3.1.0 [7e506255] ScopedValues v1.6.0 [91c51154] SentinelArrays v1.4.9 [efcf1570] Setfield v1.1.2 [ce78b400] SimpleUnPack v1.1.0 [a2af1166] SortingAlgorithms v1.2.2 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.7.1 [171d559e] SplittablesBase v0.1.15 [90137ffa] StaticArrays v1.9.18 [1e83bf80] StaticArraysCore v1.4.4 [64bff920] StatisticalTraits v3.5.0 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 ⌅ [2913bbd2] StatsBase v0.33.21 [4c63d2b9] StatsFuns v1.5.2 [892a3eda] StringManipulation v0.4.4 ⌃ [09ab397b] StructArrays v0.6.18 ⌅ [2efcf032] SymbolicIndexingInterface v0.2.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [5d786b92] TerminalLoggers v0.1.7 [9f7883ad] Tracker v0.2.38 ⌃ [28d57a85] Transducers v0.4.80 [410a4b4d] Tricks v0.1.13 [781d530d] TruncatedStacktraces v1.4.0 ⌅ [fce5fe82] Turing v0.24.4 [013be700] UnsafeAtomics v0.3.0 [efce3f68] WoodburyMatrices v1.1.0 [700de1a5] ZygoteRules v0.2.7 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [4536629a] OpenBLAS_jll v0.3.30+0 [05823500] OpenLibm_jll v0.8.7+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [8e850b90] libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... WARNING: Method definition (::Type{Main.StateHistoryCallback{A, F} where F where A})(Any, Any) in module Main at /home/pkgeval/.julia/packages/MCMCTempering/movdr/test/utils.jl:17 overwritten at /home/pkgeval/.julia/packages/MCMCTempering/movdr/test/utils.jl:21. The temperature was sorted to ensure decreasing order. ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 517.961 │ :param_1 => 435.307 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 443.361 └ :param_1 => 379.113 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 517.961 │ :param_1 => 435.307 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 719.111 └ :param_1 => 539.808 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 517.961 │ :param_1 => 435.307 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 421.236 └ :param_1 => 534.423 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 517.961 │ :param_1 => 435.307 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 322.773 └ :param_1 => 538.382 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 517.961 │ :param_1 => 435.307 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 433.9 └ :param_1 => 635.436 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :m => 1624.3 │ :s => 1420.82 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :m => 1342.81 └ :s => 1770.66 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :m => 1624.3 │ :s => 1420.82 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :m => 2575.64 └ :s => 2820.06 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :m => 75.1928 │ :s => 84.4782 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :m => 90.6161 └ :s => 112.162 AdvancedMH.jl: Test Failed at /home/pkgeval/.julia/packages/MCMCTempering/movdr/test/runtests.jl:170 Expression: all((isapprox(mean[sym], mean_tempered[sym]; atol, rtol) for sym = keys(mean))) Evaluated: all(Base.Generator{Base.KeySet{Symbol, Dict{Symbol, Float64}}, var"#75#76"{Float64, Float64, Dict{Symbol, Float64}, Dict{Symbol, Float64}}}(var"#75#76"{Float64, Float64, Dict{Symbol, Float64}, Dict{Symbol, Float64}}(0.2, 1.0e-6, Dict(:m => 0.7649606823579133, :s => 3.269951762267081), Dict(:m => 0.718788310360831, :s => 3.5790488002484473)), [:m, :s])) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] [2] compare_chains(chain::Chains{Float64, AxisArrays.AxisArray{Float64, 3, Array{Float64, 3}, Tuple{AxisArrays.Axis{:iter, StepRange{Int64, Int64}}, AxisArrays.Axis{:var, Vector{Symbol}}, AxisArrays.Axis{:chain, UnitRange{Int64}}}}, Missing, @NamedTuple{parameters::Vector{Symbol}, internals::Vector{Symbol}}, @NamedTuple{}}, chain_tempered::Chains{Float64, AxisArrays.AxisArray{Float64, 3, Array{Float64, 3}, Tuple{AxisArrays.Axis{:iter, StepRange{Int64, Int64}}, AxisArrays.Axis{:var, Vector{Symbol}}, AxisArrays.Axis{:chain, UnitRange{Int64}}}}, Missing, @NamedTuple{parameters::Vector{Symbol}, internals::Vector{Symbol}}, @NamedTuple{}}; atol::Float64, rtol::Float64, compare_ess::Bool, compare_ess_slack::Float64, isbroken::Bool) @ Main ~/.julia/packages/MCMCTempering/movdr/test/runtests.jl:170 [3] kwcall(::@NamedTuple{atol::Float64, compare_ess::Bool, isbroken::Bool}, ::typeof(compare_chains), chain::Chains{Float64, AxisArrays.AxisArray{Float64, 3, Array{Float64, 3}, Tuple{AxisArrays.Axis{:iter, StepRange{Int64, Int64}}, AxisArrays.Axis{:var, Vector{Symbol}}, AxisArrays.Axis{:chain, UnitRange{Int64}}}}, Missing, @NamedTuple{parameters::Vector{Symbol}, internals::Vector{Symbol}}, @NamedTuple{}}, chain_tempered::Chains{Float64, AxisArrays.AxisArray{Float64, 3, Array{Float64, 3}, Tuple{AxisArrays.Axis{:iter, StepRange{Int64, Int64}}, AxisArrays.Axis{:var, Vector{Symbol}}, AxisArrays.Axis{:chain, UnitRange{Int64}}}}, Missing, @NamedTuple{parameters::Vector{Symbol}, internals::Vector{Symbol}}, @NamedTuple{}}) @ Main ~/.julia/packages/MCMCTempering/movdr/test/runtests.jl:156 [4] top-level scope @ ~/.julia/packages/MCMCTempering/movdr/test/runtests.jl:187 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [6] macro expansion @ ~/.julia/packages/MCMCTempering/movdr/test/runtests.jl:337 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [8] macro expansion @ ~/.julia/packages/MCMCTempering/movdr/test/runtests.jl:415 [inlined] [9] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [10] macro expansion @ ~/.julia/packages/MCMCTempering/movdr/test/runtests.jl:464 [inlined] ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :m => 75.1928 │ :s => 84.4782 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :m => 96.9201 └ :s => 100.558 SwapSampler: Test Failed at /home/pkgeval/.julia/packages/MCMCTempering/movdr/test/abstractmcmc.jl:225 Expression: ≈(vec(mean(params_resolved; dims = 2)), [5.0, 5.0], atol = 0.2) Evaluated: [4.804847495685061, 4.792659688089595] ≈ [5.0, 5.0] (atol=0.2) Stacktrace: [1] top-level scope @ ~/.julia/packages/MCMCTempering/movdr/test/abstractmcmc.jl:2 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/MCMCTempering/movdr/test/abstractmcmc.jl:171 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [5] macro expansion @ ~/.julia/packages/MCMCTempering/movdr/test/abstractmcmc.jl:225 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (0.9899694133449635, 1.0, 0.07240076210293342) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.0929515361349853, 1.118033988749895, 0.10069662926398812) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.2334711297149639, 1.25, 0.08781196823107634) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.4377526085402785, 1.3975424859373684, 0.09994380892799037) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.6638806278322613, 1.5624999999999998, 0.11814313519258904) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.825145857120255, 1.7469281074217102, 0.13500502921338448) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.948231311666848, 1.9531249999999996, 0.16207782578285368) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.1693938284266054, 2.1836601342771376, 0.16924824279957865) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.582476544442474, 2.4414062499999996, 0.19152031755677013) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.7691276680535246, 2.729575167846422, 0.23110287200440952) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (3.2179700516704535, 3.051757812499999, 0.293869491822889) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.0038753558363243, 1.0, 0.07205878173627403) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.126325877638106, 1.118033988749895, 0.08427671772448828) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.263532513326759, 1.25, 0.10128706545772459) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.384996267726739, 1.3975424859373684, 0.1275023223857304) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.527495846164912, 1.5624999999999998, 0.11966135322903149) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.7578078116371312, 1.7469281074217102, 0.17586161753656332) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.9566257012834751, 1.9531249999999996, 0.180855834604205) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.2852598059897185, 2.1836601342771376, 0.2428826931090308) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.442830583187233, 2.4414062499999996, 0.35161285644326323) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.505404752026571, 2.729575167846422, 0.28281930167664265) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.99134525761523, 3.051757812499999, 0.3298095880671899) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (0.9619967069163039, 1.0, 0.0695626374155905) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.1079004218402007, 1.118033988749895, 0.07595187686565281) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.20714791659201, 1.25, 0.09212359855488388) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.4431237215198849, 1.3975424859373684, 0.0973747098457633) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.633897642654441, 1.5624999999999998, 0.10764464571569025) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.6847080843760256, 1.7469281074217102, 0.12862951610449574) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.9821474628192046, 1.9531249999999996, 0.1825179756377636) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.1389557227054143, 2.1836601342771376, 0.1593987357412375) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.5508596231553216, 2.4414062499999996, 0.20597589917809153) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.9684888885846794, 2.729575167846422, 0.25194056084893407) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (3.0679444966580114, 3.051757812499999, 0.2791019286260017) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (0.9619967069163039, 1.0, 0.0695626374155905) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.1079004218402007, 1.118033988749895, 0.07595187686565281) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.20714791659201, 1.25, 0.09212359855488388) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.4431237215198849, 1.3975424859373684, 0.0973747098457633) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.633897642654441, 1.5624999999999998, 0.10764464571569025) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.6847080843760256, 1.7469281074217102, 0.12862951610449574) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.9821474628192046, 1.9531249999999996, 0.1825179756377636) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.1389557227054143, 2.1836601342771376, 0.1593987357412375) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.5508596231553216, 2.4414062499999996, 0.20597589917809153) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.9684888885846794, 2.729575167846422, 0.25194056084893407) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (3.0679444966580114, 3.051757812499999, 0.2791019286260017) Test Summary: | Pass Fail Total Time MCMCTempering.jl | 1519 2 1521 5m26.2s Swapping | 34 34 1.5s Simple MvNormal with no expected swaps | 9 9 29.9s GMM 1D | 9 9 9.2s MvNormal 2D with different swap strategies | 53 53 56.0s Turing.jl | 25 1 26 2m27.4s Tempering of models | 2 2 8.3s AdvancedHMC.jl | 12 12 1m33.3s AdvancedMH.jl | 11 1 12 31.5s AbstractMCMC | 1261 1 1262 39.1s CompositionSampler(.., saveall=true) | 205 205 6.3s CompositionSampler(.., saveall=false) | 105 105 0.2s CompositionSampler(.., saveall=Val{true}()) | 205 205 1.7s CompositionSampler(.., saveall=Val{false}()) | 105 105 1.7s RepeatedSampler(..., saveall=true) | 204 204 2.5s RepeatedSampler(..., saveall=false) | 104 104 0.1s RepeatedSampler(..., saveall=Val{true}()) | 204 204 2.5s RepeatedSampler(..., saveall=Val{false}()) | 104 104 1.6s MultiSampler | 15 15 7.5s SwapSampler | 9 1 10 14.8s bundle_samples with Vector | 2 2 1.4s bundle_samples with Vector{MCMCChains.Chains} | 3 3 2.6s Simple tempered Gaussian (closed form) | 128 128 42.7s RNG of the outermost testset: Random.Xoshiro(0xee4dfad4ead663b7, 0xb63e416af83dd5da, 0x6c691af510241b2a, 0x215352ac6f0122d1, 0x185d88962d4c60ce) ERROR: LoadError: Some tests did not pass: 1519 passed, 2 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/MCMCTempering/movdr/test/runtests.jl:186 Testing failed after 368.4s ERROR: LoadError: Package MCMCTempering errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3138 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3003 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:586 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:562 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [12] include(mod::Module, _path::String) @ Base ./Base.jl:323 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:585 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 1209.15s: package has test failures