Package evaluation to test KissABC on Julia 1.14.0-DEV.1893 (b4aba01002*) started at 2026-03-15T21:35:36.171 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 13.6s ################################################################################ # Installation # Installing KissABC... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [9c9dad79] + KissABC v3.0.1 Updating `~/.julia/environments/v1.14/Manifest.toml` ⌅ [80f14c24] + AbstractMCMC v3.0.0 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.5.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [4fba245c] + ArrayInterface v7.23.0 ⌅ [198e06fe] + BangBang v0.3.40 [9718e550] + Baselet v0.1.1 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [2a0fbf3d] + CPUSummary v0.2.7 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [88cd18e8] + ConsoleProgressMonitor v0.1.2 [187b0558] + ConstructionBase v1.6.0 [adafc99b] + CpuId v0.3.1 [9a962f9c] + DataAPI v1.16.0 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [1a297f60] + FillArrays v1.16.0 [3e5b6fbb] + HostCPUFeatures v0.1.18 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [22cec73e] + InitialValues v0.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [9c9dad79] + KissABC v3.0.1 [10f19ff3] + LayoutPointers v0.1.17 [1d6d02ad] + LeftChildRightSiblingTrees v0.2.1 [2ab3a3ac] + LogExpFunctions v0.3.29 ⌅ [e6f89c97] + LoggingExtras v0.4.9 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 ⌅ [128add7d] + MicroCollections v0.1.4 [e1d29d7a] + Missings v1.2.0 ⌅ [0987c9cc] + MonteCarloMeasurements v1.0.0 [bac558e1] + OrderedCollections v1.8.1 ⌃ [90014a1f] + PDMats v0.11.35 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.2 [33c8b6b6] + ProgressLogging v0.1.6 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.2 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [94e857df] + SIMDTypes v0.1.0 [476501e8] + SLEEFPirates v0.6.43 [431bcebd] + SciMLPublic v1.0.1 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.7.1 [171d559e] + SplittablesBase v0.1.15 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.9.0 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 ⌅ [2913bbd2] + StatsBase v0.33.21 [4c63d2b9] + StatsFuns v1.5.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [5d786b92] + TerminalLoggers v0.1.7 ⌃ [28d57a85] + Transducers v0.4.80 [3d5dd08c] + VectorizationBase v0.21.72 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.30+0 [05823500] + OpenLibm_jll v0.8.7+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 5.71s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 5382.8 ms ✓ AbstractMCMC 9838.9 ms ✓ MonteCarloMeasurements 8001.0 ms ✓ KissABC 3 dependencies successfully precompiled in 25 seconds. 106 already precompiled. 9 dependencies precompiled but different versions are currently loaded (Base64, Dates, JuliaSyntaxHighlighting, Logging, Markdown, Printf, StyledStrings, TOML and UUIDs). Restart julia to access the new versions. Otherwise, 54 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompilation completed after 49.44s ################################################################################ # Testing # Testing KissABC Status `/tmp/jl_qm4hPB/Project.toml` ⌅ [80f14c24] AbstractMCMC v3.0.0 [31c24e10] Distributions v0.25.123 [9c9dad79] KissABC v3.0.1 ⌅ [0987c9cc] MonteCarloMeasurements v1.0.0 [10745b16] Statistics v1.11.1 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_qm4hPB/Manifest.toml` ⌅ [80f14c24] AbstractMCMC v3.0.0 [1520ce14] AbstractTrees v0.4.5 [79e6a3ab] Adapt v4.5.0 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 [4fba245c] ArrayInterface v7.23.0 ⌅ [198e06fe] BangBang v0.3.40 [9718e550] Baselet v0.1.1 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [2a0fbf3d] CPUSummary v0.2.7 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [88cd18e8] ConsoleProgressMonitor v0.1.2 [187b0558] ConstructionBase v1.6.0 [adafc99b] CpuId v0.3.1 [9a962f9c] DataAPI v1.16.0 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [244e2a9f] DefineSingletons v0.1.2 [31c24e10] Distributions v0.25.123 [ffbed154] DocStringExtensions v0.9.5 [1a297f60] FillArrays v1.16.0 [3e5b6fbb] HostCPUFeatures v0.1.18 [34004b35] HypergeometricFunctions v0.3.28 [615f187c] IfElse v0.1.1 [22cec73e] InitialValues v0.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [9c9dad79] KissABC v3.0.1 [10f19ff3] LayoutPointers v0.1.17 [1d6d02ad] LeftChildRightSiblingTrees v0.2.1 [2ab3a3ac] LogExpFunctions v0.3.29 ⌅ [e6f89c97] LoggingExtras v0.4.9 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 ⌅ [128add7d] MicroCollections v0.1.4 [e1d29d7a] Missings v1.2.0 ⌅ [0987c9cc] MonteCarloMeasurements v1.0.0 [bac558e1] OrderedCollections v1.8.1 ⌃ [90014a1f] PDMats v0.11.35 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.2 [33c8b6b6] ProgressLogging v0.1.6 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.4.0 [1fd47b50] QuadGK v2.11.2 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [94e857df] SIMDTypes v0.1.0 [476501e8] SLEEFPirates v0.6.43 [431bcebd] SciMLPublic v1.0.1 [efcf1570] Setfield v1.1.2 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.7.1 [171d559e] SplittablesBase v0.1.15 [aedffcd0] Static v1.3.1 [0d7ed370] StaticArrayInterface v1.9.0 [90137ffa] StaticArrays v1.9.18 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 ⌅ [2913bbd2] StatsBase v0.33.21 [4c63d2b9] StatsFuns v1.5.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [5d786b92] TerminalLoggers v0.1.7 ⌃ [28d57a85] Transducers v0.4.80 [3d5dd08c] VectorizationBase v0.21.72 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [4536629a] OpenBLAS_jll v0.3.30+0 [05823500] OpenLibm_jll v0.8.7+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [8e850b90] libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Test Summary: | Pass Total Time Factored | 10 10 1.6s ┌ Warning: `Product(v)` is deprecated, please use `product_distribution(v)` │ caller = top-level scope at runtests.jl:25 └ @ Core ~/.julia/packages/KissABC/lBWGp/test/runtests.jl:25 Test Summary: | Pass Total Time Push | 4 4 4.5s Test Summary: | Pass Total Time Tiny Data, Approximate Bayesian Computation and the Socks of Karl Broman | 4 4 27.4s Test Summary: | Pass Total Time Normal dist -> Dirac Delta inference | 2 2 9.4s ┌ Warning: Only a single thread available: MCMC chains are not sampled in parallel └ @ AbstractMCMC ~/.julia/packages/AbstractMCMC/088Ow/src/sample.jl:253 sim(res) = 1.5 ± 0.004 Test Summary: | Pass Total Time Normal dist -> Dirac Delta inference, MCMCThreads | 1 1 4.8s Test Summary: | Pass Total Time Normal dist + Uniform Distr inference | 2 2 6.6s Test Summary: | Pass Total Time Inference on drifted Wiener Process | 2 2 7.1s :Hard threshold: testing m = 0.25 ± 4.8e-15 r = -0.0226 ± 0.67 Classical Mixture Model 0.1N+N: Test Failed at /home/pkgeval/.julia/packages/KissABC/lBWGp/test/runtests.jl:172 Expression: testst("Hard threshold", res) Evaluated: testst("Hard threshold", -0.0226 ± 0.67) Stacktrace: [1] top-level scope @ ~/.julia/packages/KissABC/lBWGp/test/runtests.jl:134 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/KissABC/lBWGp/test/runtests.jl:172 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] :Kernelized threshold: testing m = 0.25 ± 4.8e-15 r = 0.00848 ± 0.71 Classical Mixture Model 0.1N+N: Test Failed at /home/pkgeval/.julia/packages/KissABC/lBWGp/test/runtests.jl:173 Expression: testst("Kernelized threshold", resk) Evaluated: testst("Kernelized threshold", 0.00848 ± 0.71) Stacktrace: [1] top-level scope @ ~/.julia/packages/KissABC/lBWGp/test/runtests.jl:134 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/KissABC/lBWGp/test/runtests.jl:173 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] :SMC: testing m = 0.25 ± 4.8e-15 r = -0.0321 ± 0.64 Classical Mixture Model 0.1N+N: Test Failed at /home/pkgeval/.julia/packages/KissABC/lBWGp/test/runtests.jl:174 Expression: testst("SMC", ressmc) Evaluated: testst("SMC", -0.0321 ± 0.64) Stacktrace: [1] top-level scope @ ~/.julia/packages/KissABC/lBWGp/test/runtests.jl:134 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/KissABC/lBWGp/test/runtests.jl:174 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] Test Summary: | Fail Total Time Classical Mixture Model 0.1N+N | 3 3 28.5s RNG of the outermost testset: Xoshiro(0xfff0241072ddab67, 0xc53bc12f4c3f0b4e, 0x56d451780b2dd4ba, 0x50a4aa153d208dd8, 0x3649a58b3b63d5db) ERROR: LoadError: Some tests did not pass: 0 passed, 3 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/KissABC/lBWGp/test/runtests.jl:133 Testing failed after 109.87s ERROR: LoadError: Package KissABC errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3138 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3003 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:586 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:562 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [12] include(mod::Module, _path::String) @ Base ./Base.jl:323 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:585 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 200.17s: package has test failures