Package evaluation to test ExactWrightFisher on Julia 1.14.0-DEV.1893 (b4aba01002*) started at 2026-03-15T18:17:21.164 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 14.04s ################################################################################ # Installation # Installing ExactWrightFisher... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [8c1589a6] + ExactWrightFisher v0.1.12 Updating `~/.julia/environments/v1.14/Manifest.toml` ⌅ [c3fe647b] + AbstractAlgebra v0.47.6 [66dad0bd] + AliasTables v1.1.3 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.3 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [8c1589a6] + ExactWrightFisher v0.1.12 [1a297f60] + FillArrays v1.16.0 [34004b35] + HypergeometricFunctions v0.3.28 [92d709cd] + IrrationalConstants v0.2.6 [692b3bcd] + JLLWrappers v1.7.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 ⌅ [2edaba10] + Nemo v0.52.4 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 [21216c6a] + Preferences v1.5.2 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.2 [fb686558] + RandomExtensions v0.4.4 [189a3867] + Reexport v1.2.2 [79098fc4] + Rmath v0.9.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.7.1 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 ⌅ [e134572f] + FLINT_jll v301.300.102+0 [656ef2d0] + OpenBLAS32_jll v0.3.30+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [781609d7] + GMP_jll v6.3.0+2 [3a97d323] + MPFR_jll v4.2.2+0 [4536629a] + OpenBLAS_jll v0.3.30+0 [05823500] + OpenLibm_jll v0.8.7+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 6.1s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 2420.7 ms ✓ FLINT_jll 34975.0 ms ✓ Nemo 9115.1 ms ✓ ExactWrightFisher 3 dependencies successfully precompiled in 47 seconds. 57 already precompiled. 8 dependencies precompiled but different versions are currently loaded (Base64, Dates, JuliaSyntaxHighlighting, Logging, Markdown, Printf, StyledStrings and TOML). Restart julia to access the new versions. Otherwise, 21 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompilation completed after 72.49s ################################################################################ # Testing # Testing ExactWrightFisher Status `/tmp/jl_AlyywF/Project.toml` [31c24e10] Distributions v0.25.123 [8c1589a6] ExactWrightFisher v0.1.12 ⌅ [2edaba10] Nemo v0.52.4 [92933f4c] ProgressMeter v1.11.0 [276daf66] SpecialFunctions v2.7.1 [4c63d2b9] StatsFuns v1.5.2 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_AlyywF/Manifest.toml` ⌅ [c3fe647b] AbstractAlgebra v0.47.6 [66dad0bd] AliasTables v1.1.3 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.3 [31c24e10] Distributions v0.25.123 [ffbed154] DocStringExtensions v0.9.5 [8c1589a6] ExactWrightFisher v0.1.12 [1a297f60] FillArrays v1.16.0 [34004b35] HypergeometricFunctions v0.3.28 [92d709cd] IrrationalConstants v0.2.6 [692b3bcd] JLLWrappers v1.7.1 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 ⌅ [2edaba10] Nemo v0.52.4 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.37 [21216c6a] Preferences v1.5.2 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.4.0 [1fd47b50] QuadGK v2.11.2 [fb686558] RandomExtensions v0.4.4 [189a3867] Reexport v1.2.2 [79098fc4] Rmath v0.9.0 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.7.1 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.10 [4c63d2b9] StatsFuns v1.5.2 ⌅ [e134572f] FLINT_jll v301.300.102+0 [656ef2d0] OpenBLAS32_jll v0.3.30+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [781609d7] GMP_jll v6.3.0+2 [3a97d323] MPFR_jll v4.2.2+0 [4536629a] OpenBLAS_jll v0.3.30+0 [05823500] OpenLibm_jll v0.8.7+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [8e850b90] libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Testing... Test Summary: | Pass Total Time helper functions | 15 15 6.8s 8.146905 seconds (4.50 M allocations: 265.891 MiB, 5.42% gc time, 99.41% compilation time: 8% of which was recompilation) Test Summary: | Pass Total Time testing Ancestor(A∞) functions | 37 37 1m40.4s 100.920865 seconds (201.99 M allocations: 10.689 GiB, 20.66% gc time, 8.59% compilation time) Test Summary: | Pass Total Time testing approximate Ancestor(A∞) functions | 3 3 0.2s 0.285255 seconds (52.38 k allocations: 2.841 MiB, 93.16% compilation time) kvec = [4, 5, 5, 6, 6, 6, 6, 7, 7, 7, 7, 7, 7, 7, 7, 7, 7, 7, 7, 7, 7, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 5, 5, 5, 5, 5, 5] S_kvec_M_BOTH = Nemo.ArbFieldElem[[-1122356852547.868845637122861097715065729303161555426610938684904225601574 +/- 2.48e-61], [1656805132233.661875391728083125338318932187371023550227053657153063630665 +/- 5.88e-61]], U = 0.07336635446929285 kvec = [5, 6, 6, 7, 7, 7, 7, 8, 8, 8, 8, 8, 8, 8, 8, 8, 8, 8, 8, 8, 8, 7, 7, 7, 7, 7, 7, 7, 7, 7, 7, 7, 7, 7, 6, 6, 6, 6, 6, 6] S_kvec_M_BOTH = Nemo.ArbFieldElem[[-379917688363.241798947470362389798366510231909011743080820398646015357710 +/- 2.45e-61], [685982935677.033005109117450030037015245789893404186135322326301660233328 +/- 2.77e-61]], U = 0.07336635446929285 kvec = [6, 7, 7, 8, 8, 8, 8, 9, 9, 9, 9, 9, 9, 9, 9, 9, 9, 9, 9, 9, 9, 8, 8, 8, 8, 8, 8, 8, 8, 8, 8, 8, 8, 8, 7, 7, 7, 7, 7, 7] S_kvec_M_BOTH = Nemo.ArbFieldElem[[-87990209913.062948885012767415603710886921421299766113562405101213209007 +/- 2.83e-61], [191385650181.982735758774283273612954068520054087690938301257682129791722 +/- 2.43e-61]], U = 0.07336635446929285 kvec = [7, 8, 8, 9, 9, 9, 9, 10, 10, 10, 10, 10, 10, 10, 10, 10, 10, 10, 10, 10, 10, 9, 9, 9, 9, 9, 9, 9, 9, 9, 9, 9, 9, 9, 8, 8, 8, 8, 8, 8] S_kvec_M_BOTH = Nemo.ArbFieldElem[[-14304142309.770676405384573430695939487387763697265882200425305362184442 +/- 5.09e-61], [37030935678.188908517159546023453314231556132945252915614101750603237243 +/- 5.74e-61]], U = 0.07336635446929285 kvec = [8, 9, 9, 10, 10, 10, 10, 11, 11, 11, 11, 11, 11, 11, 11, 11, 11, 11, 11, 11, 11, 10, 10, 10, 10, 10, 10, 10, 10, 10, 10, 10, 10, 10, 9, 9, 9, 9, 9, 9] S_kvec_M_BOTH = Nemo.ArbFieldElem[[-1665781695.747302030334676883770430077386683065789036705613364053741996 +/- 3.04e-61], [5083551330.581034855432522251504929703688104865219347270337844880334020 +/- 2.60e-61]], U = 0.07336635446929285 kvec = [9, 10, 10, 11, 11, 11, 11, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 11, 11, 11, 11, 11, 11, 11, 11, 11, 11, 11, 11, 11, 10, 10, 10, 10, 10, 10] S_kvec_M_BOTH = Nemo.ArbFieldElem[[-141274005.855485740280864478606062613199878708043781699234166748120438 +/- 5.51e-61], [504267300.322598074701738536120576517884450668413527657425605592875887 +/- 7.11e-61]], U = 0.07336635446929285 kvec = [10, 11, 11, 12, 12, 12, 12, 13, 13, 13, 13, 13, 13, 13, 13, 13, 13, 13, 13, 13, 13, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 11, 11, 11, 11, 11, 11] S_kvec_M_BOTH = Nemo.ArbFieldElem[[-8844405.774395850006394948875788191209074259859075347282999940901172 +/- 2.97e-61], [36687626.758827863245137070597511680781702497813695658110390485123038 +/- 2.82e-61]], U = 0.07336635446929285 kvec = [11, 12, 12, 13, 13, 13, 13, 14, 14, 14, 14, 14, 14, 14, 14, 14, 14, 14, 14, 14, 14, 13, 13, 13, 13, 13, 13, 13, 13, 13, 13, 13, 13, 13, 12, 12, 12, 12, 12, 12] S_kvec_M_BOTH = Nemo.ArbFieldElem[[-413352.702423903440207779504441333897254139126557444412692332424862 +/- 5.69e-61], [1981944.147099526107870140344768473956614952243222212314249108119777 +/- 2.69e-61]], U = 0.07336635446929285 kvec = [12, 13, 13, 14, 14, 14, 14, 15, 15, 15, 15, 15, 15, 15, 15, 15, 15, 15, 15, 15, 15, 14, 14, 14, 14, 14, 14, 14, 14, 14, 14, 14, 14, 14, 13, 13, 13, 13, 13, 13] S_kvec_M_BOTH = Nemo.ArbFieldElem[[-14558.486612199973416003836831555942644764339086290611552878067546 +/- 4.60e-61], [80325.671740279813298946328228137471587633481641712067263848742579 +/- 4.27e-61]], U = 0.07336635446929285 kvec = [13, 14, 14, 15, 15, 15, 15, 16, 16, 16, 16, 16, 16, 16, 16, 16, 16, 16, 16, 16, 16, 15, 15, 15, 15, 15, 15, 15, 15, 15, 15, 15, 15, 15, 14, 14, 14, 14, 14, 14] S_kvec_M_BOTH = Nemo.ArbFieldElem[[-388.984757233658758732222460538066511585069048562979566604731260 +/- 5.78e-61], [2464.351819474594209048811406595993722307290223782216575468158140 +/- 7.28e-61]], U = 0.07336635446929285 kvec = [14, 15, 15, 16, 16, 16, 16, 17, 17, 17, 17, 17, 17, 17, 17, 17, 17, 17, 17, 17, 17, 16, 16, 16, 16, 16, 16, 16, 16, 16, 16, 16, 16, 16, 15, 15, 15, 15, 15, 15] S_kvec_M_BOTH = Nemo.ArbFieldElem[[-7.359395198187307781501220655887686354966919904057703527810047 +/- 4.41e-61], [58.238772657494741519683194652174969025723736285211834195817218 +/- 5.60e-61]], U = 0.07336635446929285 kvec = [15, 16, 16, 17, 17, 17, 17, 18, 18, 18, 18, 18, 18, 18, 18, 18, 18, 18, 18, 18, 18, 17, 17, 17, 17, 17, 17, 17, 17, 17, 17, 17, 17, 17, 16, 16, 16, 16, 16, 16] S_kvec_M_BOTH = Nemo.ArbFieldElem[[0.491632434503653238476497790980110369167234779351382580834744 +/- 4.56e-61], [1.651728605916412462968508104696263904327458125748122812085394 +/- 4.59e-61]], U = 0.07336635446929285 Test Summary: | Pass Total Time testing Wright-Fisher transition and simulation functions | 59 59 12.6s 12.654400 seconds (7.15 M allocations: 408.189 MiB, 2.69% gc time, 89.29% compilation time) Test Summary: | Pass Total Time testing Wright-Fisher semi exact transition and simulation functions | 9 9 0.6s 1.232616 seconds (663.22 k allocations: 35.004 MiB, 80.86% compilation time: 1% of which was recompilation) Testing ExactWrightFisher tests passed Testing completed after 142.3s PkgEval succeeded after 246.21s