Package evaluation to test BaytesSMC on Julia 1.14.0-DEV.1893 (b4aba01002*) started at 2026-03-15T21:50:46.618 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 13.91s ################################################################################ # Installation # Installing BaytesSMC... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [2428e3a5] + BaytesSMC v0.3.6 Updating `~/.julia/environments/v1.14/Manifest.toml` [7d9f7c33] + Accessors v0.1.43 [79e6a3ab] + Adapt v4.5.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [e5a8efeb] + BaytesCore v0.2.0 [12a76ff9] + BaytesDiff v0.3.1 [26b78818] + BaytesFilters v0.3.6 [8e6e46a0] + BaytesMCMC v0.3.4 [c78c806d] + BaytesOptim v0.1.9 [c4a8eb41] + BaytesPMCMC v0.3.3 [2428e3a5] + BaytesSMC v0.3.6 ⌅ [76274a88] + Bijectors v0.13.18 [082447d4] + ChainRules v1.73.0 [d360d2e6] + ChainRulesCore v1.26.0 [9e997f8a] + ChangesOfVariables v0.1.10 [38540f10] + CommonSolve v0.2.6 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [fdbdab4c] + ElasticArrays v1.2.12 [1a297f60] + FillArrays v1.16.0 ⌅ [d9f16b24] + Functors v0.4.12 [46192b85] + GPUArraysCore v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [dbb5928d] + MappedArrays v0.4.3 [e1d29d7a] + Missings v1.2.0 [44c54197] + ModelWrappers v0.5.6 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 [21216c6a] + Preferences v1.5.2 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.2 [c1ae055f] + RealDot v0.1.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [f2b01f46] + Roots v2.2.13 [ce78b400] + SimpleUnPack v1.1.0 [a2af1166] + SortingAlgorithms v1.2.2 [dc90abb0] + SparseInverseSubset v0.1.2 [276daf66] + SpecialFunctions v2.7.1 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [09ab397b] + StructArrays v0.7.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.30+0 [05823500] + OpenLibm_jll v0.8.7+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 6.18s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 6634.7 ms ✓ BaytesMCMC 5689.8 ms ✓ BaytesPMCMC 6215.3 ms ✓ BaytesSMC 3 dependencies successfully precompiled in 21 seconds. 139 already precompiled. 9 dependencies precompiled but different versions are currently loaded (Base64, Dates, JuliaSyntaxHighlighting, Logging, Markdown, Printf, StyledStrings, TOML and UUIDs). Restart julia to access the new versions. Otherwise, 69 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompilation completed after 46.41s ################################################################################ # Testing # Testing BaytesSMC Status `/tmp/jl_RJZhqV/Project.toml` [dce04be8] ArgCheck v2.5.0 [e5a8efeb] BaytesCore v0.2.0 [12a76ff9] BaytesDiff v0.3.1 [26b78818] BaytesFilters v0.3.6 [8e6e46a0] BaytesMCMC v0.3.4 [c78c806d] BaytesOptim v0.1.9 [c4a8eb41] BaytesPMCMC v0.3.3 [2428e3a5] BaytesSMC v0.3.6 [31c24e10] Distributions v0.25.123 [ffbed154] DocStringExtensions v0.9.5 ⌃ [f6369f11] ForwardDiff v0.10.39 [44c54197] ModelWrappers v0.5.6 ⌅ [d41bc354] NLSolversBase v7.10.0 ⌃ [429524aa] Optim v1.13.3 [ce78b400] SimpleUnPack v1.1.0 [10745b16] Statistics v1.11.1 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_RJZhqV/Manifest.toml` [47edcb42] ADTypes v1.21.0 [7d9f7c33] Accessors v0.1.43 [79e6a3ab] Adapt v4.5.0 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 [4fba245c] ArrayInterface v7.23.0 [e5a8efeb] BaytesCore v0.2.0 [12a76ff9] BaytesDiff v0.3.1 [26b78818] BaytesFilters v0.3.6 [8e6e46a0] BaytesMCMC v0.3.4 [c78c806d] BaytesOptim v0.1.9 [c4a8eb41] BaytesPMCMC v0.3.3 [2428e3a5] BaytesSMC v0.3.6 ⌅ [76274a88] Bijectors v0.13.18 [082447d4] ChainRules v1.73.0 [d360d2e6] ChainRulesCore v1.26.0 [9e997f8a] ChangesOfVariables v0.1.10 [38540f10] CommonSolve v0.2.6 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [187b0558] ConstructionBase v1.6.0 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.16 [31c24e10] Distributions v0.25.123 [ffbed154] DocStringExtensions v0.9.5 [fdbdab4c] ElasticArrays v1.2.12 [4e289a0a] EnumX v1.0.7 [1a297f60] FillArrays v1.16.0 [6a86dc24] FiniteDiff v2.29.0 ⌃ [f6369f11] ForwardDiff v0.10.39 ⌅ [d9f16b24] Functors v0.4.12 [46192b85] GPUArraysCore v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 ⌃ [d3d80556] LineSearches v7.5.1 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 [dbb5928d] MappedArrays v0.4.3 [e1d29d7a] Missings v1.2.0 [44c54197] ModelWrappers v0.5.6 ⌅ [d41bc354] NLSolversBase v7.10.0 [77ba4419] NaNMath v1.1.3 ⌃ [429524aa] Optim v1.13.3 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.37 [85a6dd25] PositiveFactorizations v0.2.4 [21216c6a] Preferences v1.5.2 [43287f4e] PtrArrays v1.4.0 [1fd47b50] QuadGK v2.11.2 [c1ae055f] RealDot v0.1.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [f2b01f46] Roots v2.2.13 [efcf1570] Setfield v1.1.2 [ce78b400] SimpleUnPack v1.1.0 [a2af1166] SortingAlgorithms v1.2.2 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.7.1 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.10 [4c63d2b9] StatsFuns v1.5.2 [09ab397b] StructArrays v0.7.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [4536629a] OpenBLAS_jll v0.3.30+0 [05823500] OpenLibm_jll v0.8.7+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [8e850b90] libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Warning: Number of θ particles is no multiple of available number of threads. SMC algorithm with jitter kernel MCMC Diagnostics: Sampler finished after 100 iterations with average acceptance ratio of 100.0%. Initial average ℓlikelihood per particle: -3738.1, variance: 0.01 Final average ℓlikelihood per particle: -3738.1, variance: 0.01 Total number of jittering steps: 0. Rejuvenations on average every Inf step, every Inf steps in first half, every Inf steps in second half. Quantiles for ESS: [4.0, 4.0, 4.0, 4.0, 4.0] for 4 chains. SMC algorithm with jitter kernel MCMC Diagnostics: Sampler finished after 100 iterations with average acceptance ratio of 100.0%. Initial average ℓlikelihood per particle: -3738.03, variance: 0.04 Final average ℓlikelihood per particle: -3738.03, variance: 0.04 Total number of jittering steps: 0. Rejuvenations on average every Inf step, every Inf steps in first half, every Inf steps in second half. Quantiles for ESS: [4.0, 4.0, 4.0, 4.0, 4.0] for 4 chains. SMC algorithm with jitter kernel PMCMC Diagnostics: Sampler finished after 100 iterations with average acceptance ratio of 100.0%. Initial average ℓlikelihood per particle: -228.17, variance: 1062.06 Final average ℓlikelihood per particle: -228.17, variance: 1062.06 Total number of jittering steps: 0. Rejuvenations on average every Inf step, every Inf steps in first half, every Inf steps in second half. Quantiles for ESS: [4.0, 4.0, 4.0, 4.0, 4.0] for 4 chains. SMC algorithm with jitter kernel MCMC Diagnostics: Sampler finished after 949 iterations with average acceptance ratio of 99.58%. Initial average ℓlikelihood per particle: -204.97, variance: 0.38 Final average ℓlikelihood per particle: -3734.0, variance: 0.01 Total number of jittering steps: 20. Rejuvenations on average every 237.25 step, every 118.5 steps in first half, every Inf steps in second half. Quantiles for average rejuvenation correlation of parameter: [-0.06, 0.2, 0.59, 0.69, 0.74]. Quantiles for average number rejuvenation steps: [1.3, 1.6, 4.5, 8.2, 9.1]. Quantiles for ESS: [3.37, 3.62, 3.86, 3.98, 3.99] for 4 chains. SMC algorithm with jitter kernel MCMC Diagnostics: Sampler finished after 949 iterations with average acceptance ratio of 99.37%. Initial average ℓlikelihood per particle: -204.98, variance: 0.17 Final average ℓlikelihood per particle: -3734.37, variance: 0.15 Total number of jittering steps: 19. Rejuvenations on average every 158.17 step, every 94.8 steps in first half, every 475.0 steps in second half. Quantiles for average rejuvenation correlation of parameter: [-0.12, -0.09, 0.42, 0.7, 0.76]. Quantiles for average number rejuvenation steps: [1.0, 1.0, 2.0, 3.0, 6.5]. Quantiles for ESS: [3.18, 3.29, 3.58, 3.96, 3.98] for 4 chains. SMC algorithm with jitter kernel Optimizer Diagnostics: Sampler finished after 100 iterations with average acceptance ratio of 100.0%. Initial average ℓlikelihood per particle: -206.82, variance: 0.0 Final average ℓlikelihood per particle: -206.82, variance: 0.0 Total number of jittering steps: 0. Rejuvenations on average every Inf step, every Inf steps in first half, every Inf steps in second half. Quantiles for ESS: [4.0, 4.0, 4.0, 4.0, 4.0] for 4 chains. SMC algorithm with jitter kernel Optimizer Diagnostics: Sampler finished after 949 iterations with average acceptance ratio of 0.0%. Initial average ℓlikelihood per particle: -204.3, variance: 0.0 Final average ℓlikelihood per particle: -3733.93, variance: 0.0 Total number of jittering steps: 4745. Rejuvenations on average every 1.0 step, every 1.0 steps in first half, every 1.0 steps in second half. Quantiles for ESS: [4.0, 4.0, 4.0, 4.0, 4.0] for 4 chains. SMC algorithm with jitter kernel Optimizer Diagnostics: Sampler finished after 949 iterations with average acceptance ratio of 0.0%. Initial average ℓlikelihood per particle: -204.3, variance: 0.0 Final average ℓlikelihood per particle: -3733.93, variance: 0.0 Total number of jittering steps: 4745. Rejuvenations on average every 1.0 step, every 1.0 steps in first half, every 1.0 steps in second half. Quantiles for ESS: [4.0, 4.0, 4.0, 4.0, 4.0] for 4 chains. SMC algorithm with jitter kernel SMC2Kernel Diagnostics: Sampler finished after 100 iterations with average acceptance ratio of 97.0%. Initial average ℓlikelihood per particle: -158.69, variance: 6.72 Final average ℓlikelihood per particle: -322.08, variance: 1.35 Total number of jittering steps: 13. Rejuvenations on average every 33.33 step, every 50.0 steps in first half, every 25.0 steps in second half. Quantiles for average rejuvenation correlation of parameter: [0.22, 0.25, 0.34, 0.46, 0.49]. Quantiles for average number rejuvenation steps: [2.6, 3.2, 5.0, 5.6, 5.8]. Quantiles for ESS: [3.33, 3.47, 3.74, 3.91, 3.97] for 4 chains. Test Summary: | Pass Total Time All tests | 39 39 2m51.2s Testing BaytesSMC tests passed Testing completed after 204.45s PkgEval succeeded after 285.3s