Package evaluation to test MCMCTempering on Julia 1.14.0-DEV.1877 (00654c1407*) started at 2026-03-12T21:39:05.910 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 14.62s ################################################################################ # Installation # Installing MCMCTempering... Resolving package versions... Installed CompositionsBase ──────────── v0.1.2 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed MacroTools ────────────────── v0.5.16 Installed DefineSingletons ──────────── v0.1.2 Installed FFTA ──────────────────────── v0.3.1 Installed DataStructures ────────────── v0.19.3 Installed MicroCollections ──────────── v0.1.4 Installed MCMCTempering ─────────────── v0.3.2 Installed AbstractTrees ─────────────── v0.4.5 Installed FillArrays ────────────────── v1.16.0 Installed KernelDensity ─────────────── v0.6.11 Installed AliasTables ───────────────── v1.1.3 Installed ConstructionBase ──────────── v1.6.0 Installed StatsBase ─────────────────── v0.34.10 Installed Adapt ─────────────────────── v4.5.0 Installed HypergeometricFunctions ───── v0.3.28 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed Compat ────────────────────── v4.18.1 Installed OrderedCollections ────────── v1.8.1 Installed RecipesBase ───────────────── v1.3.4 Installed ProgressLogging ───────────── v0.1.6 Installed ConsoleProgressMonitor ────── v0.1.2 Installed DataAPI ───────────────────── v1.16.0 Installed DataValueInterfaces ───────── v1.0.0 Installed Statistics ────────────────── v1.11.1 Installed StatsAPI ──────────────────── v1.8.0 Installed InitialValues ─────────────── v0.3.1 Installed OffsetArrays ──────────────── v1.17.0 Installed ArgCheck ──────────────────── v2.5.0 Installed LoggingExtras ─────────────── v1.2.0 Installed StaticArraysCore ──────────── v1.4.4 Installed MCMCDiagnosticTools ───────── v0.3.16 Installed ConcreteStructs ───────────── v0.2.3 Installed ProgressMeter ─────────────── v1.11.0 Installed PrecompileTools ───────────── v1.3.3 Installed IrrationalConstants ───────── v0.2.6 Installed Ratios ────────────────────── v0.4.5 Installed AbstractFFTs ──────────────── v1.5.0 Installed QuadGK ────────────────────── v2.11.2 Installed ChainRulesCore ────────────── v1.26.0 Installed LogDensityProblems ────────── v2.2.0 Installed BangBang ──────────────────── v0.3.40 Installed StaticArrays ──────────────── v1.9.18 Installed TerminalLoggers ───────────── v0.1.7 Installed AxisAlgorithms ────────────── v1.1.0 Installed IntegerMathUtils ──────────── v0.1.3 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed LogExpFunctions ───────────── v0.3.29 Installed LeftChildRightSiblingTrees ── v0.2.1 Installed StringManipulation ────────── v0.4.4 Installed Requires ──────────────────── v1.3.1 Installed Rmath ─────────────────────── v0.9.0 Installed PrettyTables ──────────────── v2.4.0 Installed SplittablesBase ───────────── v0.1.15 Installed Distributions ─────────────── v0.25.123 Installed StatsFuns ─────────────────── v1.5.2 Installed WoodburyMatrices ──────────── v1.1.0 Installed MuladdMacro ───────────────── v0.2.4 Installed Interpolations ────────────── v0.16.2 Installed Transducers ───────────────── v0.4.80 Installed AbstractMCMC ──────────────── v4.4.2 Installed Tables ────────────────────── v1.12.1 Installed Reexport ──────────────────── v1.2.2 Installed InverseFunctions ──────────── v0.1.17 Installed SpecialFunctions ──────────── v2.7.1 Installed PtrArrays ─────────────────── v1.4.0 Installed IntervalSets ──────────────── v0.7.13 Installed Setfield ──────────────────── v1.1.2 Installed Missings ──────────────────── v1.2.0 Installed Baselet ───────────────────── v0.1.1 Installed JLLWrappers ───────────────── v1.7.1 Installed ScientificTypesBase ───────── v3.1.0 Installed TableTraits ───────────────── v1.0.1 Installed LaTeXStrings ──────────────── v1.4.0 Installed SortingAlgorithms ─────────── v1.2.2 Installed Preferences ───────────────── v1.5.2 Installed MCMCChains ────────────────── v6.0.7 Installed Crayons ───────────────────── v4.1.1 Installed RangeArrays ───────────────── v0.3.2 Installed Primes ────────────────────── v0.5.7 Installed PDMats ────────────────────── v0.11.37 Installed NaturalSort ───────────────── v1.0.0 Installed IterTools ─────────────────── v1.10.0 Installed StatisticalTraits ─────────── v3.5.0 Installed AxisArrays ────────────────── v0.4.8 Installed MLJModelInterface ─────────── v1.12.1 Installed DocStringExtensions ───────── v0.9.5 Installing 2 artifacts Installed artifact OpenSpecFun 194.9 KiB Installed artifact Rmath 121.9 KiB Updating `~/.julia/environments/v1.14/Project.toml` [ce233488] + MCMCTempering v0.3.2 Updating `~/.julia/environments/v1.14/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 ⌅ [80f14c24] + AbstractMCMC v4.4.2 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.5.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.8 ⌅ [198e06fe] + BangBang v0.3.40 [9718e550] + Baselet v0.1.1 [d360d2e6] + ChainRulesCore v1.26.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [88cd18e8] + ConsoleProgressMonitor v0.1.2 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [b86e33f2] + FFTA v0.3.1 [1a297f60] + FillArrays v1.16.0 [34004b35] + HypergeometricFunctions v0.3.28 [22cec73e] + InitialValues v0.3.1 [18e54dd8] + IntegerMathUtils v0.1.3 [a98d9a8b] + Interpolations v0.16.2 [8197267c] + IntervalSets v0.7.13 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [5ab0869b] + KernelDensity v0.6.11 [b964fa9f] + LaTeXStrings v1.4.0 [1d6d02ad] + LeftChildRightSiblingTrees v0.2.1 [6fdf6af0] + LogDensityProblems v2.2.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 ⌅ [c7f686f2] + MCMCChains v6.0.7 [be115224] + MCMCDiagnosticTools v0.3.16 [ce233488] + MCMCTempering v0.3.2 [e80e1ace] + MLJModelInterface v1.12.1 [1914dd2f] + MacroTools v0.5.16 ⌅ [128add7d] + MicroCollections v0.1.4 [e1d29d7a] + Missings v1.2.0 [46d2c3a1] + MuladdMacro v0.2.4 [c020b1a1] + NaturalSort v1.0.0 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.2 ⌅ [08abe8d2] + PrettyTables v2.4.0 [27ebfcd6] + Primes v0.5.7 [33c8b6b6] + ProgressLogging v0.1.6 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.2 [b3c3ace0] + RangeArrays v0.3.2 [c84ed2f1] + Ratios v0.4.5 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [30f210dd] + ScientificTypesBase v3.1.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.7.1 [171d559e] + SplittablesBase v0.1.15 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 [64bff920] + StatisticalTraits v3.5.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [892a3eda] + StringManipulation v0.4.4 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [5d786b92] + TerminalLoggers v0.1.7 ⌃ [28d57a85] + Transducers v0.4.80 [efce3f68] + WoodburyMatrices v1.1.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.30+0 [05823500] + OpenLibm_jll v0.8.7+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 10.28s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4809.6 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/RUPmD/src/julia-1.13/activate_set.jl:78 Precompiling package dependencies... Precompiling packages... 4575.9 ms ✓ MacroTools 1694.6 ms ✓ InlineStrings 804.7 ms ✓ Reexport 1040.6 ms ✓ MappedArrays 1251.1 ms ✓ ConstructionBase 2181.8 ms ✓ IrrationalConstants 947.2 ms ✓ ChangesOfVariables 800.6 ms ✓ DataValueInterfaces 913.1 ms ✓ StatsAPI 1190.8 ms ✓ IterTools 1091.2 ms ✓ IntervalSets 1030.2 ms ✓ Functors 2187.5 ms ✓ Combinatorics 944.3 ms ✓ ArgCheck 817.5 ms ✓ CommonSolve 897.7 ms ✓ LaTeXStrings 2508.3 ms ✓ Baselet 1136.6 ms ✓ Statistics 1017.0 ms ✓ Tricks 1068.2 ms ✓ StaticArraysCore 1106.2 ms ✓ LRUCache 893.6 ms ✓ PtrArrays 837.6 ms ✓ NaturalSort 943.1 ms ✓ DataAPI 847.1 ms ✓ RealDot 3581.6 ms ✓ UnsafeAtomics 904.5 ms ✓ InvertedIndices 1706.9 ms ✓ RandomNumbers 965.7 ms ✓ InverseFunctions 884.9 ms ✓ CompositionsBase 1167.5 ms ✓ AbstractTrees 848.6 ms ✓ SimpleUnPack 1645.1 ms ✓ InitialValues 864.4 ms ✓ MuladdMacro 1091.8 ms ✓ AbstractFFTs 909.0 ms ✓ EnumX 2260.3 ms ✓ FillArrays 918.5 ms ✓ ExprTools 845.4 ms ✓ IntegerMathUtils 844.5 ms ✓ ConcreteStructs 896.2 ms ✓ RangeArrays 1410.7 ms ✓ OrderedCollections 1484.6 ms ✓ FunctionWrappers 947.0 ms ✓ HashArrayMappedTries 1124.9 ms ✓ ProgressLogging 1148.2 ms ✓ DocStringExtensions 862.4 ms ✓ DefineSingletons 1677.0 ms ✓ OffsetArrays 792.0 ms ✓ IteratorInterfaceExtensions 1950.5 ms ✓ Crayons 1017.4 ms ✓ DelimitedFiles 1057.9 ms ✓ NaNMath 1281.8 ms ✓ Requires 1997.1 ms ✓ PDMats 1529.0 ms ✓ SparseInverseSubset 1720.7 ms ✓ WoodburyMatrices 2520.7 ms ✓ SentinelArrays 1468.5 ms ✓ LoggingExtras 1944.1 ms ✓ ProgressMeter 1358.7 ms ✓ ScientificTypesBase 1203.3 ms ✓ Compat 1467.8 ms ✓ Preferences 777.0 ms ✓ InplaceOps 5950.6 ms ✓ Lazy 1810.1 ms ✓ CommonSubexpressions 828.7 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 4132.7 ms ✓ ChangesOfVariables → ChangesOfVariablesTestExt 794.0 ms ✓ IntervalSets → IntervalSetsRandomExt 843.3 ms ✓ ConstructionBase → ConstructionBaseIntervalSetsExt 1458.4 ms ✓ Statistics → SparseArraysExt 778.5 ms ✓ IntervalSets → IntervalSetsStatisticsExt 892.5 ms ✓ DiffResults 781.0 ms ✓ LRUCache → SerializationExt 956.0 ms ✓ AliasTables 986.7 ms ✓ Missings 1027.4 ms ✓ PooledArrays 972.1 ms ✓ Atomix 1901.1 ms ✓ Random123 1229.7 ms ✓ InverseFunctions → InverseFunctionsDatesExt 1680.4 ms ✓ InverseFunctions → InverseFunctionsTestExt 895.0 ms ✓ ChangesOfVariables → ChangesOfVariablesInverseFunctionsExt 840.0 ms ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 889.7 ms ✓ LeftChildRightSiblingTrees 4332.1 ms ✓ AbstractFFTs → AbstractFFTsTestExt 1700.6 ms ✓ FillArrays → FillArraysSparseArraysExt 1064.2 ms ✓ FillArrays → FillArraysStatisticsExt 943.0 ms ✓ RuntimeGeneratedFunctions 1207.9 ms ✓ Primes 828.9 ms ✓ FunctionWrappersWrappers 1473.3 ms ✓ Libtask 959.0 ms ✓ ScopedValues 1404.7 ms ✓ LogExpFunctions 1483.6 ms ✓ SymbolicIndexingInterface 2132.6 ms ✓ LogDensityProblems 830.0 ms ✓ TableTraits 876.6 ms ✓ Ratios 981.6 ms ✓ Adapt 1723.8 ms ✓ FillArrays → FillArraysPDMatsExt 1578.2 ms ✓ AxisAlgorithms 967.3 ms ✓ ConsoleProgressMonitor 1318.6 ms ✓ StatisticalTraits 873.5 ms ✓ Compat → CompatLinearAlgebraExt 1255.5 ms ✓ PrecompileTools 1543.2 ms ✓ JLLWrappers 2331.4 ms ✓ TruncatedStacktraces 3154.2 ms ✓ Setfield 1923.9 ms ✓ AxisArrays 1813.8 ms ✓ DensityInterface 5620.8 ms ✓ Accessors 1897.2 ms ✓ TerminalLoggers 2763.7 ms ✓ FFTA 890.9 ms ✓ LogExpFunctions → LogExpFunctionsChangesOfVariablesExt 948.5 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 1254.7 ms ✓ LogDensityProblemsAD 1997.1 ms ✓ Tables 2016.7 ms ✓ ArrayInterface 1375.1 ms ✓ GPUArraysCore 855.1 ms ✓ OffsetArrays → OffsetArraysAdaptExt 3562.6 ms ✓ MLJModelInterface 2859.1 ms ✓ ChainRulesCore 3968.8 ms ✓ DataStructures 4112.7 ms ✓ StringManipulation 14062.4 ms ✓ StaticArrays 3612.4 ms ✓ RecipesBase 2290.2 ms ✓ Rmath_jll 2285.4 ms ✓ OpenSpecFun_jll 3588.3 ms ✓ SplittablesBase 2138.8 ms ✓ Accessors → TestExt 2979.4 ms ✓ Accessors → IntervalSetsExt 2905.3 ms ✓ Accessors → LinearAlgebraExt 1737.7 ms ✓ StructArrays 1783.0 ms ✓ BangBang 1462.9 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 1469.5 ms ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt 1525.2 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 2241.1 ms ✓ Optimisers 2512.5 ms ✓ ZygoteRules 956.5 ms ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 3607.6 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 1715.4 ms ✓ SortingAlgorithms 2949.5 ms ✓ QuadGK WARNING: Imported binding Base._sortslices was undeclared at import time during import to NamedArrays. WARNING: Imported binding Base._negdims was undeclared at import time during import to NamedArrays. WARNING: Imported binding Base.DimSelector was undeclared at import time during import to NamedArrays. ERROR: LoadError: invalid method definition in NamedArrays: exported function Base._sortslices does not exist Stacktrace:  [1] top-level scope  @ ~/.julia/packages/NamedArrays/spYk1/src/rearrange.jl:106  [2] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:324  [3] top-level scope  @ ~/.julia/packages/NamedArrays/spYk1/src/NamedArrays.jl:35  [4] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [5] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3289  [6] top-level scope  @ stdin:5  [7] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3131  [9] include_string  @ ./loading.jl:3141 [inlined]  [10] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [11] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/NamedArrays/spYk1/src/rearrange.jl:106 in expression starting at /home/pkgeval/.julia/packages/NamedArrays/spYk1/src/NamedArrays.jl:9 in expression starting at stdin:5 ✗ NamedArrays 29102.6 ms ✓ PrettyTables 1896.9 ms ✓ StaticArrays → StaticArraysStatisticsExt 1971.7 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1902.6 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 2049.3 ms ✓ FillArrays → FillArraysStaticArraysExt 1837.7 ms ✓ Adapt → AdaptStaticArraysExt 1994.2 ms ✓ Accessors → StaticArraysExt 1730.0 ms ✓ IntervalSets → IntervalSetsRecipesBaseExt 2020.2 ms ✓ Rmath 5704.4 ms ✓ SpecialFunctions 7839.5 ms ✓ Roots 1512.3 ms ✓ StructArrays → StructArraysSparseArraysExt 964.3 ms ✓ StructArrays → StructArraysGPUArraysCoreExt 948.6 ms ✓ StructArrays → StructArraysAdaptExt 1999.7 ms ✓ StructArrays → StructArraysStaticArraysExt 1401.2 ms ✓ Accessors → StructArraysExt 2010.5 ms ✓ MicroCollections 1216.9 ms ✓ BangBang → BangBangChainRulesCoreExt 1270.5 ms ✓ BangBang → BangBangStructArraysExt 2125.0 ms ✓ BangBang → BangBangStaticArraysExt 4152.6 ms ✓ SciMLOperators 2813.6 ms ✓ RecursiveArrayTools 4272.4 ms ✓ StatsBase 72649.1 ms ✓ DataFrames 9333.9 ms ✓ KernelAbstractions 4943.2 ms ✓ Interpolations 4585.6 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 2723.0 ms ✓ HypergeometricFunctions 1388.3 ms ✓ DiffRules 1493.1 ms ✓ Roots → RootsChainRulesCoreExt 11948.2 ms ✓ ChainRules 6883.5 ms ✓ Transducers 11312.5 ms ✓ SciMLBase 6028.9 ms ✓ BangBang → BangBangDataFramesExt 3534.8 ms ✓ KernelAbstractions → SparseArraysExt 2516.7 ms ✓ KernelAbstractions → LinearAlgebraExt 3436.4 ms ✓ StatsFuns 7499.7 ms ✓ ForwardDiff 6089.6 ms ✓ Transducers → TransducersDataFramesExt 4790.9 ms ✓ AbstractMCMC 13496.5 ms ✓ NNlib 3930.8 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 1408.9 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 10748.6 ms ✓ Distributions 2585.5 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 2202.9 ms ✓ LogDensityProblemsAD → LogDensityProblemsADForwardDiffExt 1770.3 ms ✓ Roots → RootsForwardDiffExt 3305.1 ms ✓ Interpolations → InterpolationsForwardDiffExt 7578.5 ms ✓ AdvancedHMC 4753.7 ms ✓ AbstractPPL 3071.6 ms ✓ NNlib → NNlibSpecialFunctionsExt 3232.4 ms ✓ NNlib → NNlibForwardDiffExt 4262.6 ms ✓ Distributions → DistributionsTestExt 3824.5 ms ✓ Distributions → DistributionsDensityInterfaceExt 4241.7 ms ✓ Distributions → DistributionsChainRulesCoreExt 5640.4 ms ✓ MCMCDiagnosticTools 14144.1 ms ✓ Tracker 4218.2 ms ✓ AdvancedPS 4274.3 ms ✓ AdvancedMH 4365.5 ms ✓ EllipticalSliceSampling 5112.6 ms ✓ KernelDensity 9145.1 ms ✓ Bijectors 9546.0 ms ✓ DistributionsAD 4127.5 ms ✓ Tracker → TrackerPDMatsExt 3550.2 ms ✓ LogDensityProblemsAD → LogDensityProblemsADTrackerExt 4104.9 ms ✓ ArrayInterface → ArrayInterfaceTrackerExt 4165.1 ms ✓ RecursiveArrayTools → RecursiveArrayToolsTrackerExt 4092.8 ms ✓ AdvancedMH → AdvancedMHStructArraysExt 4083.0 ms ✓ AdvancedMH → AdvancedMHForwardDiffExt 9245.5 ms ✓ MCMCChains 22295.7 ms ✓ DynamicPPL 3150.0 ms ✓ DistributionsAD → DistributionsADForwardDiffExt 6513.3 ms ✓ DistributionsAD → DistributionsADTrackerExt 13955.5 ms ✓ MCMCTempering 7324.6 ms ✓ AdvancedHMC → AdvancedHMCMCMCChainsExt 6859.7 ms ✓ AdvancedMH → AdvancedMHMCMCChainsExt 5769.0 ms ✓ AdvancedVI 10638.4 ms ✓ Turing 219 dependencies successfully precompiled in 728 seconds. 22 already precompiled. Precompilation completed after 761.1s ################################################################################ # Testing # Testing MCMCTempering Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_A7EqbM/Project.toml` ⌅ [0bf59076] + AdvancedHMC v0.4.6 ⌅ [5b7e9947] + AdvancedMH v0.7.5 ⌅ [76274a88] + Bijectors v0.10.8 [a93c6f00] + DataFrames v1.8.1 ⌅ [f6369f11] + ForwardDiff v0.10.39 [996a588d] + LogDensityProblemsAD v1.13.1 ⌃ [be115224] ↓ MCMCDiagnosticTools v0.3.16 ⇒ v0.3.15 [ce233488] + MCMCTempering v0.3.2 ⌅ [fce5fe82] + Turing v0.24.4 Updating `/tmp/jl_A7EqbM/Manifest.toml` ⌅ [7a57a42e] + AbstractPPL v0.5.4 [7d9f7c33] + Accessors v0.1.43 ⌅ [79e6a3ab] ↓ Adapt v4.5.0 ⇒ v3.7.2 ⌅ [0bf59076] + AdvancedHMC v0.4.6 ⌅ [5b7e9947] + AdvancedMH v0.7.5 ⌅ [576499cb] + AdvancedPS v0.4.3 ⌅ [b5ca4192] + AdvancedVI v0.1.6 ⌃ [4fba245c] + ArrayInterface v7.7.1 [a9b6321e] + Atomix v1.1.2 ⌅ [76274a88] + Bijectors v0.10.8 [082447d4] + ChainRules v1.73.0 [9e997f8a] + ChangesOfVariables v0.1.10 [861a8166] + Combinatorics v1.1.0 [38540f10] + CommonSolve v0.2.6 [bbf7d656] + CommonSubexpressions v0.3.1 [2569d6c7] + ConcreteStructs v0.2.3 [a93c6f00] + DataFrames v1.8.1 ⌅ [864edb3b] ↓ DataStructures v0.19.3 ⇒ v0.18.22 [8bb1440f] + DelimitedFiles v1.9.1 [b429d917] + DensityInterface v0.4.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [ced4e74d] + DistributionsAD v0.6.58 ⌅ [366bfd00] + DynamicPPL v0.21.6 ⌅ [cad2338a] + EllipticalSliceSampling v1.1.0 [4e289a0a] + EnumX v1.0.7 [e2ba6199] + ExprTools v0.1.10 ⌅ [f6369f11] + ForwardDiff v0.10.39 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 ⌅ [d9f16b24] + Functors v0.3.0 ⌅ [46192b85] + GPUArraysCore v0.1.5 [076d061b] + HashArrayMappedTries v0.2.0 [842dd82b] + InlineStrings v1.4.5 [505f98c9] + InplaceOps v0.3.0 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [63c18a36] + KernelAbstractions v0.9.40 [8ac3fa9e] + LRUCache v1.6.2 [50d2b5c4] + Lazy v0.15.1 ⌅ [6f1fad26] + Libtask v0.8.8 [996a588d] + LogDensityProblemsAD v1.13.1 ⌃ [be115224] ↓ MCMCDiagnosticTools v0.3.16 ⇒ v0.3.15 [ce233488] + MCMCTempering v0.3.2 [dbb5928d] + MappedArrays v0.4.3 ⌃ [872c559c] + NNlib v0.9.31 [77ba4419] + NaNMath v1.1.3 ⌅ [86f7a689] + NamedArrays v0.9.8 ⌃ [3bd65402] + Optimisers v0.2.15 ⌃ [90014a1f] ↓ PDMats v0.11.37 ⇒ v0.11.35 [2dfb63ee] + PooledArrays v1.4.3 [74087812] + Random123 v1.7.1 [e6cf234a] + RandomNumbers v1.6.0 [c1ae055f] + RealDot v0.1.0 ⌅ [731186ca] + RecursiveArrayTools v2.38.10 [f2b01f46] + Roots v2.2.13 [7e49a35a] + RuntimeGeneratedFunctions v0.5.17 ⌅ [0bca4576] + SciMLBase v1.92.0 ⌅ [c0aeaf25] + SciMLOperators v0.2.12 [7e506255] + ScopedValues v1.6.0 [91c51154] + SentinelArrays v1.4.9 [ce78b400] + SimpleUnPack v1.1.0 [dc90abb0] + SparseInverseSubset v0.1.2 ⌅ [2913bbd2] ↓ StatsBase v0.34.10 ⇒ v0.33.21 ⌃ [09ab397b] + StructArrays v0.6.18 ⌅ [2efcf032] + SymbolicIndexingInterface v0.2.2 [9f7883ad] + Tracker v0.2.38 [410a4b4d] + Tricks v0.1.13 [781d530d] + TruncatedStacktraces v1.4.0 ⌅ [fce5fe82] + Turing v0.24.4 [013be700] + UnsafeAtomics v0.3.0 [700de1a5] + ZygoteRules v0.2.7 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_A7EqbM/Project.toml` ⌅ [80f14c24] AbstractMCMC v4.4.2 ⌅ [0bf59076] AdvancedHMC v0.4.6 ⌅ [5b7e9947] AdvancedMH v0.7.5 ⌅ [76274a88] Bijectors v0.10.8 [a93c6f00] DataFrames v1.8.1 [31c24e10] Distributions v0.25.123 [1a297f60] FillArrays v1.16.0 ⌅ [f6369f11] ForwardDiff v0.10.39 [6fdf6af0] LogDensityProblems v2.2.0 [996a588d] LogDensityProblemsAD v1.13.1 ⌅ [c7f686f2] MCMCChains v6.0.7 ⌃ [be115224] MCMCDiagnosticTools v0.3.15 [ce233488] MCMCTempering v0.3.2 [efcf1570] Setfield v1.1.2 [10745b16] Statistics v1.11.1 ⌅ [fce5fe82] Turing v0.24.4 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_A7EqbM/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 ⌅ [80f14c24] AbstractMCMC v4.4.2 ⌅ [7a57a42e] AbstractPPL v0.5.4 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.43 ⌅ [79e6a3ab] Adapt v3.7.2 ⌅ [0bf59076] AdvancedHMC v0.4.6 ⌅ [5b7e9947] AdvancedMH v0.7.5 ⌅ [576499cb] AdvancedPS v0.4.3 ⌅ [b5ca4192] AdvancedVI v0.1.6 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 ⌃ [4fba245c] ArrayInterface v7.7.1 [a9b6321e] Atomix v1.1.2 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.8 ⌅ [198e06fe] BangBang v0.3.40 [9718e550] Baselet v0.1.1 ⌅ [76274a88] Bijectors v0.10.8 [082447d4] ChainRules v1.73.0 [d360d2e6] ChainRulesCore v1.26.0 [9e997f8a] ChangesOfVariables v0.1.10 [861a8166] Combinatorics v1.1.0 [38540f10] CommonSolve v0.2.6 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [88cd18e8] ConsoleProgressMonitor v0.1.2 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [244e2a9f] DefineSingletons v0.1.2 [8bb1440f] DelimitedFiles v1.9.1 [b429d917] DensityInterface v0.4.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [31c24e10] Distributions v0.25.123 [ced4e74d] DistributionsAD v0.6.58 [ffbed154] DocStringExtensions v0.9.5 ⌅ [366bfd00] DynamicPPL v0.21.6 ⌅ [cad2338a] EllipticalSliceSampling v1.1.0 [4e289a0a] EnumX v1.0.7 [e2ba6199] ExprTools v0.1.10 [b86e33f2] FFTA v0.3.1 [1a297f60] FillArrays v1.16.0 ⌅ [f6369f11] ForwardDiff v0.10.39 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 ⌅ [d9f16b24] Functors v0.3.0 ⌅ [46192b85] GPUArraysCore v0.1.5 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [22cec73e] InitialValues v0.3.1 [842dd82b] InlineStrings v1.4.5 [505f98c9] InplaceOps v0.3.0 [18e54dd8] IntegerMathUtils v0.1.3 [a98d9a8b] Interpolations v0.16.2 [8197267c] IntervalSets v0.7.13 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [63c18a36] KernelAbstractions v0.9.40 [5ab0869b] KernelDensity v0.6.11 [8ac3fa9e] LRUCache v1.6.2 [b964fa9f] LaTeXStrings v1.4.0 [50d2b5c4] Lazy v0.15.1 [1d6d02ad] LeftChildRightSiblingTrees v0.2.1 ⌅ [6f1fad26] Libtask v0.8.8 [6fdf6af0] LogDensityProblems v2.2.0 [996a588d] LogDensityProblemsAD v1.13.1 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 ⌅ [c7f686f2] MCMCChains v6.0.7 ⌃ [be115224] MCMCDiagnosticTools v0.3.15 [ce233488] MCMCTempering v0.3.2 [e80e1ace] MLJModelInterface v1.12.1 [1914dd2f] MacroTools v0.5.16 [dbb5928d] MappedArrays v0.4.3 ⌅ [128add7d] MicroCollections v0.1.4 [e1d29d7a] Missings v1.2.0 [46d2c3a1] MuladdMacro v0.2.4 ⌃ [872c559c] NNlib v0.9.31 [77ba4419] NaNMath v1.1.3 ⌅ [86f7a689] NamedArrays v0.9.8 [c020b1a1] NaturalSort v1.0.0 [6fe1bfb0] OffsetArrays v1.17.0 ⌃ [3bd65402] Optimisers v0.2.15 [bac558e1] OrderedCollections v1.8.1 ⌃ [90014a1f] PDMats v0.11.35 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.2 ⌅ [08abe8d2] PrettyTables v2.4.0 [27ebfcd6] Primes v0.5.7 [33c8b6b6] ProgressLogging v0.1.6 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.4.0 [1fd47b50] QuadGK v2.11.2 [74087812] Random123 v1.7.1 [e6cf234a] RandomNumbers v1.6.0 [b3c3ace0] RangeArrays v0.3.2 [c84ed2f1] Ratios v0.4.5 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 ⌅ [731186ca] RecursiveArrayTools v2.38.10 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [f2b01f46] Roots v2.2.13 [7e49a35a] RuntimeGeneratedFunctions v0.5.17 ⌅ [0bca4576] SciMLBase v1.92.0 ⌅ [c0aeaf25] SciMLOperators v0.2.12 [30f210dd] ScientificTypesBase v3.1.0 [7e506255] ScopedValues v1.6.0 [91c51154] SentinelArrays v1.4.9 [efcf1570] Setfield v1.1.2 [ce78b400] SimpleUnPack v1.1.0 [a2af1166] SortingAlgorithms v1.2.2 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.7.1 [171d559e] SplittablesBase v0.1.15 [90137ffa] StaticArrays v1.9.18 [1e83bf80] StaticArraysCore v1.4.4 [64bff920] StatisticalTraits v3.5.0 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 ⌅ [2913bbd2] StatsBase v0.33.21 [4c63d2b9] StatsFuns v1.5.2 [892a3eda] StringManipulation v0.4.4 ⌃ [09ab397b] StructArrays v0.6.18 ⌅ [2efcf032] SymbolicIndexingInterface v0.2.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [5d786b92] TerminalLoggers v0.1.7 [9f7883ad] Tracker v0.2.38 ⌃ [28d57a85] Transducers v0.4.80 [410a4b4d] Tricks v0.1.13 [781d530d] TruncatedStacktraces v1.4.0 ⌅ [fce5fe82] Turing v0.24.4 [013be700] UnsafeAtomics v0.3.0 [efce3f68] WoodburyMatrices v1.1.0 [700de1a5] ZygoteRules v0.2.7 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [4536629a] OpenBLAS_jll v0.3.30+0 [05823500] OpenLibm_jll v0.8.7+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [8e850b90] libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... WARNING: Method definition (::Type{Main.StateHistoryCallback{A, F} where F where A})(Any, Any) in module Main at /home/pkgeval/.julia/packages/MCMCTempering/movdr/test/utils.jl:17 overwritten at /home/pkgeval/.julia/packages/MCMCTempering/movdr/test/utils.jl:21. The temperature was sorted to ensure decreasing order. ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 529.958 │ :param_1 => 509.967 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 410.473 └ :param_1 => 344.417 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 529.958 │ :param_1 => 509.967 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 513.181 └ :param_1 => 688.077 SingleSwap(): Test Failed at /home/pkgeval/.julia/packages/MCMCTempering/movdr/test/runtests.jl:170 Expression: all((isapprox(mean[sym], mean_tempered[sym]; atol, rtol) for sym = keys(mean))) Evaluated: all(Base.Generator{Base.KeySet{Symbol, Dict{Symbol, Float64}}, var"#75#76"{Float64, Float64, Dict{Symbol, Float64}, Dict{Symbol, Float64}}}(var"#75#76"{Float64, Float64, Dict{Symbol, Float64}, Dict{Symbol, Float64}}(1.0e-6, 0.1, Dict(:param_2 => 4.365047055008618, :param_1 => -5.030130182767534), Dict(:param_2 => 4.9014301205891035, :param_1 => -4.92370807168618)), [:param_2, :param_1])) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] [2] compare_chains(chain::Chains{Float64, AxisArrays.AxisArray{Float64, 3, Array{Float64, 3}, Tuple{AxisArrays.Axis{:iter, StepRange{Int64, Int64}}, AxisArrays.Axis{:var, Vector{Symbol}}, AxisArrays.Axis{:chain, UnitRange{Int64}}}}, Missing, @NamedTuple{parameters::Vector{Symbol}, internals::Vector{Symbol}}, @NamedTuple{}}, chain_tempered::Chains{Float64, AxisArrays.AxisArray{Float64, 3, Array{Float64, 3}, Tuple{AxisArrays.Axis{:iter, StepRange{Int64, Int64}}, AxisArrays.Axis{:var, Vector{Symbol}}, AxisArrays.Axis{:chain, UnitRange{Int64}}}}, Missing, @NamedTuple{parameters::Vector{Symbol}, internals::Vector{Symbol}}, @NamedTuple{}}; atol::Float64, rtol::Float64, compare_ess::Bool, compare_ess_slack::Float64, isbroken::Bool) @ Main ~/.julia/packages/MCMCTempering/movdr/test/runtests.jl:170 [3] kwcall(::@NamedTuple{rtol::Float64, compare_ess::Bool}, ::typeof(compare_chains), chain::Chains{Float64, AxisArrays.AxisArray{Float64, 3, Array{Float64, 3}, Tuple{AxisArrays.Axis{:iter, StepRange{Int64, Int64}}, AxisArrays.Axis{:var, Vector{Symbol}}, AxisArrays.Axis{:chain, UnitRange{Int64}}}}, Missing, @NamedTuple{parameters::Vector{Symbol}, internals::Vector{Symbol}}, @NamedTuple{}}, chain_tempered::Chains{Float64, AxisArrays.AxisArray{Float64, 3, Array{Float64, 3}, Tuple{AxisArrays.Axis{:iter, StepRange{Int64, Int64}}, AxisArrays.Axis{:var, Vector{Symbol}}, AxisArrays.Axis{:chain, UnitRange{Int64}}}}, Missing, @NamedTuple{parameters::Vector{Symbol}, internals::Vector{Symbol}}, @NamedTuple{}}) @ Main ~/.julia/packages/MCMCTempering/movdr/test/runtests.jl:156 [4] top-level scope @ ~/.julia/packages/MCMCTempering/movdr/test/runtests.jl:187 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [6] macro expansion @ ~/.julia/packages/MCMCTempering/movdr/test/runtests.jl:290 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [8] macro expansion @ ~/.julia/packages/MCMCTempering/movdr/test/runtests.jl:319 [inlined] [9] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2324 [inlined] [10] macro expansion @ ~/.julia/packages/MCMCTempering/movdr/test/runtests.jl:331 [inlined] ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 529.958 │ :param_1 => 509.967 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 239.112 └ :param_1 => 480.049 SingleSwap(): Test Failed at /home/pkgeval/.julia/packages/MCMCTempering/movdr/test/runtests.jl:181 Expression: all((ess_tempered[sym] ≥ ess[sym] * compare_ess_slack for sym = keys(ess))) Evaluated: all(Base.Generator{Base.KeySet{Symbol, Dict{Symbol, Float64}}, var"#79#80"{Float64, Dict{Symbol, Float64}, Dict{Symbol, Float64}}}(var"#79#80"{Float64, Dict{Symbol, Float64}, Dict{Symbol, Float64}}(0.5, Dict(:param_2 => 239.11201736370205, :param_1 => 480.04866984390276), Dict(:param_2 => 529.9581654995346, :param_1 => 509.96684899401845)), [:param_2, :param_1])) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] [2] compare_chains(chain::Chains{Float64, AxisArrays.AxisArray{Float64, 3, Array{Float64, 3}, Tuple{AxisArrays.Axis{:iter, StepRange{Int64, Int64}}, AxisArrays.Axis{:var, Vector{Symbol}}, AxisArrays.Axis{:chain, UnitRange{Int64}}}}, Missing, @NamedTuple{parameters::Vector{Symbol}, internals::Vector{Symbol}}, @NamedTuple{}}, chain_tempered::Chains{Float64, AxisArrays.AxisArray{Float64, 3, Array{Float64, 3}, Tuple{AxisArrays.Axis{:iter, StepRange{Int64, Int64}}, AxisArrays.Axis{:var, Vector{Symbol}}, AxisArrays.Axis{:chain, UnitRange{Int64}}}}, Missing, @NamedTuple{parameters::Vector{Symbol}, internals::Vector{Symbol}}, @NamedTuple{}}; atol::Float64, rtol::Float64, compare_ess::Bool, compare_ess_slack::Float64, isbroken::Bool) @ Main ~/.julia/packages/MCMCTempering/movdr/test/runtests.jl:181 [3] kwcall(::@NamedTuple{rtol::Float64, compare_ess::Bool}, ::typeof(compare_chains), chain::Chains{Float64, AxisArrays.AxisArray{Float64, 3, Array{Float64, 3}, Tuple{AxisArrays.Axis{:iter, StepRange{Int64, Int64}}, AxisArrays.Axis{:var, Vector{Symbol}}, AxisArrays.Axis{:chain, UnitRange{Int64}}}}, Missing, @NamedTuple{parameters::Vector{Symbol}, internals::Vector{Symbol}}, @NamedTuple{}}, chain_tempered::Chains{Float64, AxisArrays.AxisArray{Float64, 3, Array{Float64, 3}, Tuple{AxisArrays.Axis{:iter, StepRange{Int64, Int64}}, AxisArrays.Axis{:var, Vector{Symbol}}, AxisArrays.Axis{:chain, UnitRange{Int64}}}}, Missing, @NamedTuple{parameters::Vector{Symbol}, internals::Vector{Symbol}}, @NamedTuple{}}) @ Main ~/.julia/packages/MCMCTempering/movdr/test/runtests.jl:156 [4] top-level scope @ ~/.julia/packages/MCMCTempering/movdr/test/runtests.jl:187 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [6] macro expansion @ ~/.julia/packages/MCMCTempering/movdr/test/runtests.jl:290 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [8] macro expansion @ ~/.julia/packages/MCMCTempering/movdr/test/runtests.jl:319 [inlined] [9] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2324 [inlined] [10] macro expansion @ ~/.julia/packages/MCMCTempering/movdr/test/runtests.jl:331 [inlined] ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 529.958 │ :param_1 => 509.967 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 429.292 └ :param_1 => 517.301 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 529.958 │ :param_1 => 509.967 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 640.843 └ :param_1 => 498.374 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :m => 1357.35 │ :s => 1632.42 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :m => 1704.85 └ :s => 2101.31 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :m => 1357.35 │ :s => 1632.42 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :m => 2368.27 └ :s => 2995.57 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :m => 309.912 │ :s => 373.127 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :m => 253.78 └ :s => 381.188 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :m => 309.912 │ :s => 373.127 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :m => 642.206 └ :s => 1410.16 ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.0263426128752462, 1.0, 0.07758592644882205) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.143567179069554, 1.118033988749895, 0.09558778134131526) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.2804181682573301, 1.25, 0.11272369542204065) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.4259164025295676, 1.3975424859373684, 0.10599679788115217) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.5382032425521739, 1.5624999999999998, 0.11426972835768244) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.7591854639194306, 1.7469281074217102, 0.15197302095626464) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.0267154247501393, 1.9531249999999996, 0.1645203830695141) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.200018720923818, 2.1836601342771376, 0.1650461264276135) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.5087179986177457, 2.4414062499999996, 0.19521958096639433) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.832179579880958, 2.729575167846422, 0.23591834274489218) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (3.2439016233306357, 3.051757812499999, 0.31620931509346534) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (0.9998046504633284, 1.0, 0.08128750920561577) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.1088030994095808, 1.118033988749895, 0.08742368371482077) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.2473300951814053, 1.25, 0.09758896264485813) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.4087084237689522, 1.3975424859373684, 0.10549852496330393) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.584663889706748, 1.5624999999999998, 0.1344491095804994) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.7701509488882343, 1.7469281074217102, 0.154903195594856) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.0025246514459183, 1.9531249999999996, 0.19078944853073773) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.1957714375532924, 2.1836601342771376, 0.3364790898575469) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.4479336942084498, 2.4414062499999996, 0.24525756218647635) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.6717970947237135, 2.729575167846422, 0.27694708026276066) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (3.197649225726745, 3.051757812499999, 0.4406323701609585) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.0355936202785962, 1.0, 0.07338751707352112) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.120644214826034, 1.118033988749895, 0.09327557344682258) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.2705842590981378, 1.25, 0.09797815989509945) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.4092040385323399, 1.3975424859373684, 0.11087545478681077) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.5207150508341951, 1.5624999999999998, 0.10539652731700963) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.7851311068977784, 1.7469281074217102, 0.12645108119336348) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.9744423969051115, 1.9531249999999996, 0.1436947652443436) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.265656526405267, 2.1836601342771376, 0.18564551980997335) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.432607971664817, 2.4414062499999996, 0.18848481613931156) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.6874743872871067, 2.729575167846422, 0.22945349519600092) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (3.067779255050703, 3.051757812499999, 0.26248200006120764) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.0355936202785962, 1.0, 0.07338751707352112) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.120644214826034, 1.118033988749895, 0.09327557344682258) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.2705842590981378, 1.25, 0.09797815989509945) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.4092040385323399, 1.3975424859373684, 0.11087545478681077) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.5207150508341951, 1.5624999999999998, 0.10539652731700963) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.7851311068977784, 1.7469281074217102, 0.12645108119336348) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.9744423969051115, 1.9531249999999996, 0.1436947652443436) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.265656526405267, 2.1836601342771376, 0.18564551980997335) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.432607971664817, 2.4414062499999996, 0.18848481613931156) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.6874743872871067, 2.729575167846422, 0.22945349519600092) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (3.067779255050703, 3.051757812499999, 0.26248200006120764) Test Summary: | Pass Fail Total Time MCMCTempering.jl | 1519 2 1521 5m12.3s Swapping | 34 34 1.5s Simple MvNormal with no expected swaps | 9 9 29.4s GMM 1D | 9 9 9.0s MvNormal 2D with different swap strategies | 51 2 53 59.9s ReversibleSwap() | 11 11 33.5s NonReversibleSwap() | 11 11 4.1s SingleSwap() | 9 2 11 9.9s SingleRandomSwap() | 10 10 4.3s RandomSwap() | 10 10 4.3s Turing.jl | 26 26 2m14.1s AbstractMCMC | 1262 1262 37.1s Simple tempered Gaussian (closed form) | 128 128 41.0s RNG of the outermost testset: Random.Xoshiro(0x6700f8e09d965234, 0xe60bb6157d15f6fd, 0x51c4fd4895ac8b0c, 0x455ca2445afd0dd2, 0x97857d6a7e224f25) ERROR: LoadError: Some tests did not pass: 1519 passed, 2 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/MCMCTempering/movdr/test/runtests.jl:186 Testing failed after 348.84s ERROR: LoadError: Package MCMCTempering errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3138 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3003 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:586 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:562 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [12] include(mod::Module, _path::String) @ Base ./Base.jl:323 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:585 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 1159.3s: package has test failures