Package evaluation to test MendelIHT on Julia 1.14.0-DEV.1851 (d64c0da64c*) started at 2026-03-06T00:15:57.194 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 14.49s ################################################################################ # Installation # Installing MendelIHT... Resolving package versions... Installed Glob ───────────────────────────── v1.4.0 Installed CompositionsBase ───────────────── v0.1.2 Installed CommonSolve ────────────────────── v0.2.6 Installed CommonWorldInvalidations ───────── v1.0.0 Installed CodecZstd ──────────────────────── v0.8.7 Installed MacroTools ─────────────────────── v0.5.16 Installed DataStructures ─────────────────── v0.19.3 Installed FilePathsBase ──────────────────── v0.9.24 Installed Rmath_jll ──────────────────────── v0.5.1+0 Installed GLM ────────────────────────────── v1.9.3 Installed ManualMemory ───────────────────── v0.1.8 Installed Bzip2_jll ──────────────────────── v1.0.9+0 Installed FillArrays ─────────────────────── v1.16.0 Installed VCFTools ───────────────────────── v0.2.10 Installed InlineStrings ──────────────────── v1.4.5 Installed Adapt ──────────────────────────── v4.5.0 Installed VectorizationBase ──────────────── v0.21.72 Installed ConstructionBase ───────────────── v1.6.0 Installed StatsModels ────────────────────── v0.7.9 Installed HypergeometricFunctions ────────── v0.3.28 Installed SLEEFPirates ───────────────────── v0.6.43 Installed DelimitedFiles ─────────────────── v1.9.1 Installed AliasTables ────────────────────── v1.1.3 Installed BitTwiddlingConvenienceFunctions ─ v0.1.6 Installed StatsBase ──────────────────────── v0.34.10 Installed CodecZlib ──────────────────────── v0.7.8 Installed SIMDTypes ──────────────────────── v0.1.0 Installed CSV ────────────────────────────── v0.10.16 Installed ShiftedArrays ──────────────────── v2.0.0 Installed TranscodingStreams ─────────────── v0.9.13 Installed ArrayInterface ─────────────────── v7.22.0 Installed OrderedCollections ─────────────── v1.8.1 Installed Compat ─────────────────────────── v4.18.1 Installed IteratorInterfaceExtensions ────── v1.0.0 Installed HypothesisTests ────────────────── v0.11.6 Installed Combinatorics ──────────────────── v1.1.0 Installed HostCPUFeatures ────────────────── v0.1.18 Installed SIMD ───────────────────────────── v3.7.2 Installed DataAPI ────────────────────────── v1.16.0 Installed LoopVectorization ──────────────── v0.12.173 Installed InvertedIndices ────────────────── v1.3.1 Installed Statistics ─────────────────────── v1.11.1 Installed dlfcn_win32_jll ────────────────── v1.4.2+0 Installed StatsAPI ───────────────────────── v1.8.0 Installed DataValueInterfaces ────────────── v1.0.0 Installed CpuId ──────────────────────────── v0.3.1 Installed OffsetArrays ───────────────────── v1.17.0 Installed SentinelArrays ─────────────────── v1.4.9 Installed PrecompileTools ────────────────── v1.3.3 Installed LayoutPointers ─────────────────── v0.1.17 Installed IrrationalConstants ────────────── v0.2.6 Installed Distances ──────────────────────── v0.10.12 Installed ProgressMeter ──────────────────── v1.11.0 Installed StaticArrayInterface ───────────── v1.9.0 Installed QuadGK ─────────────────────────── v2.11.2 Installed CodecBzip2 ─────────────────────── v0.8.5 Installed CPUSummary ─────────────────────── v0.2.7 Installed SciMLPublic ────────────────────── v1.0.1 Installed OpenSpecFun_jll ────────────────── v0.5.6+0 Installed StringManipulation ─────────────── v0.4.4 Installed Requires ───────────────────────── v1.3.1 Installed LogExpFunctions ────────────────── v0.3.29 Installed BufferedStreams ────────────────── v1.2.2 Installed Parsers ────────────────────────── v2.8.3 Installed Rmath ──────────────────────────── v0.9.0 Installed IfElse ─────────────────────────── v0.1.1 Installed Roots ──────────────────────────── v2.2.13 Installed PrettyTables ───────────────────── v3.2.3 Installed Distributions ──────────────────── v0.25.123 Installed BioGenerics ────────────────────── v0.1.5 Installed StatsFuns ──────────────────────── v1.5.2 Installed CloseOpenIntervals ─────────────── v0.1.13 Installed Tables ─────────────────────────── v1.12.1 Installed PtrArrays ──────────────────────── v1.4.0 Installed Reexport ───────────────────────── v1.2.2 Installed Missings ───────────────────────── v1.2.0 Installed InverseFunctions ───────────────── v0.1.17 Installed SpecialFunctions ───────────────── v2.7.1 Installed DataFrames ─────────────────────── v1.8.1 Installed Static ─────────────────────────── v1.3.1 Installed Preferences ────────────────────── v1.5.2 Installed WeakRefStrings ─────────────────── v1.4.2 Installed PooledArrays ───────────────────── v1.4.3 Installed DBInterface ────────────────────── v2.6.1 Installed JLLWrappers ────────────────────── v1.7.1 Installed TableTraits ────────────────────── v1.0.1 Installed XZ_jll ─────────────────────────── v5.8.2+0 Installed LaTeXStrings ───────────────────── v1.4.0 Installed Automa ─────────────────────────── v1.1.0 Installed SortingAlgorithms ──────────────── v1.2.2 Installed PDMats ─────────────────────────── v0.11.37 Installed Crayons ────────────────────────── v4.1.1 Installed SQLite_jll ─────────────────────── v3.51.2+0 Installed BGZFStreams ────────────────────── v0.3.2 Installed CodecXz ────────────────────────── v0.7.4 Installed VariantCallFormat ──────────────── v0.5.9 Installed SQLite ─────────────────────────── v1.8.0 Installed ThreadingUtilities ─────────────── v0.5.5 Installed UnPack ─────────────────────────── v1.0.2 Installed PolyesterWeave ─────────────────── v0.2.2 Installed WorkerUtilities ────────────────── v1.6.1 Installed DocStringExtensions ────────────── v0.9.5 Installed Accessors ──────────────────────── v0.1.43 Installed SnpArrays ──────────────────────── v0.3.23 Installed BGEN ───────────────────────────── v0.1.17 Installed MendelIHT ──────────────────────── v1.4.11 Installing 6 artifacts Installed artifact OpenSpecFun 194.9 KiB Installed artifact Rmath 121.9 KiB Installed artifact Bzip2 503.5 KiB Installed artifact SQLite 1.7 MiB Installed artifact XZ 1.5 MiB Installed artifact testfiles 6.2 MiB Updating `~/.julia/environments/v1.14/Project.toml` [921c7187] + MendelIHT v1.4.11 Updating `~/.julia/environments/v1.14/Manifest.toml` [7d9f7c33] + Accessors v0.1.43 [79e6a3ab] + Adapt v4.5.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.22.0 [67c07d97] + Automa v1.1.0 ⌅ [6db4b851] + BGEN v0.1.17 [28d598bf] + BGZFStreams v0.3.2 [47718e42] + BioGenerics v0.1.5 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [e1450e63] + BufferedStreams v1.2.2 [2a0fbf3d] + CPUSummary v0.2.7 [336ed68f] + CSV v0.10.16 [fb6a15b2] + CloseOpenIntervals v0.1.13 [523fee87] + CodecBzip2 v0.8.5 [ba30903b] + CodecXz v0.7.4 [944b1d66] + CodecZlib v0.7.8 [6b39b394] + CodecZstd v0.8.7 [861a8166] + Combinatorics v1.1.0 [38540f10] + CommonSolve v0.2.6 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [a10d1c49] + DBInterface v2.6.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.16.0 [38e38edf] + GLM v1.9.3 [c27321d9] + Glob v1.4.0 [3e5b6fbb] + HostCPUFeatures v0.1.18 [34004b35] + HypergeometricFunctions v0.3.28 [09f84164] + HypothesisTests v0.11.6 [615f187c] + IfElse v0.1.1 [842dd82b] + InlineStrings v1.4.5 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 [2ab3a3ac] + LogExpFunctions v0.3.29 [bdcacae8] + LoopVectorization v0.12.173 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [921c7187] + MendelIHT v1.4.11 [e1d29d7a] + Missings v1.2.0 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 [69de0a69] + Parsers v2.8.3 [1d0040c9] + PolyesterWeave v0.2.2 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.2 [08abe8d2] + PrettyTables v3.2.3 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [f2b01f46] + Roots v2.2.13 [fdea26ae] + SIMD v3.7.2 [94e857df] + SIMDTypes v0.1.0 [476501e8] + SLEEFPirates v0.6.43 [0aa819cd] + SQLite v1.8.0 [431bcebd] + SciMLPublic v1.0.1 [91c51154] + SentinelArrays v1.4.9 [1277b4bf] + ShiftedArrays v2.0.0 [4e780e97] + SnpArrays v0.3.23 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.7.1 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.9.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [3eaba693] + StatsModels v0.7.9 [892a3eda] + StringManipulation v0.4.4 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [8290d209] + ThreadingUtilities v0.5.5 ⌅ [3bb67fe8] + TranscodingStreams v0.9.13 [3a884ed6] + UnPack v1.0.2 [a620830f] + VCFTools v0.2.10 [28eba6e3] + VariantCallFormat v0.5.9 [3d5dd08c] + VectorizationBase v0.21.72 [ea10d353] + WeakRefStrings v1.4.2 [76eceee3] + WorkerUtilities v1.6.1 [6e34b625] + Bzip2_jll v1.0.9+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [76ed43ae] + SQLite_jll v3.51.2+0 [ffd25f8a] + XZ_jll v5.8.2+0 [c4b69c83] + dlfcn_win32_jll v1.4.2+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.18.0+0 [e37daf67] + LibGit2_jll v1.9.2+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.12.2 [4536629a] + OpenBLAS_jll v0.3.30+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.5+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 16.2s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4751.6 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. Precompiling package dependencies... Precompiling packages... 4425.7 ms ✓ MacroTools 1692.1 ms ✓ InlineStrings 814.8 ms ✓ Reexport 1231.8 ms ✓ ConstructionBase 2044.2 ms ✓ IrrationalConstants 797.0 ms ✓ DataValueInterfaces 926.6 ms ✓ StatsAPI 2125.1 ms ✓ Combinatorics 802.9 ms ✓ CommonSolve 863.6 ms ✓ LaTeXStrings 985.9 ms ✓ Glob 1117.0 ms ✓ Statistics 814.1 ms ✓ IfElse 819.3 ms ✓ PtrArrays 976.2 ms ✓ ManualMemory 934.6 ms ✓ DataAPI 852.3 ms ✓ SciMLPublic 886.4 ms ✓ CommonWorldInvalidations 900.9 ms ✓ InvertedIndices 1022.2 ms ✓ InverseFunctions 868.0 ms ✓ CompositionsBase 913.9 ms ✓ ShiftedArrays 1068.7 ms ✓ WorkerUtilities 2156.7 ms ✓ FillArrays 837.5 ms ✓ UnPack 859.1 ms ✓ DBInterface 1331.5 ms ✓ OrderedCollections 1156.2 ms ✓ DocStringExtensions 1658.1 ms ✓ OffsetArrays 1057.0 ms ✓ BufferedStreams 794.2 ms ✓ SIMDTypes 808.9 ms ✓ IteratorInterfaceExtensions 1949.8 ms ✓ Crayons 1030.2 ms ✓ DelimitedFiles 1315.5 ms ✓ Requires 1808.1 ms ✓ CpuId 1873.6 ms ✓ PDMats 2039.6 ms ✓ SentinelArrays 1471.8 ms ✓ StructUtils 1879.8 ms ✓ ProgressMeter 1245.6 ms ✓ Compat 1225.2 ms ✓ Preferences 2277.6 ms ✓ TranscodingStreams 838.8 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 1320.5 ms ✓ Statistics → SparseArraysExt 1533.9 ms ✓ Distances 1013.6 ms ✓ AliasTables 1857.5 ms ✓ ThreadingUtilities 976.5 ms ✓ Missings 1048.0 ms ✓ PooledArrays 878.6 ms ✓ InverseFunctions → InverseFunctionsDatesExt 1677.7 ms ✓ InverseFunctions → InverseFunctionsTestExt 822.1 ms ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 1572.8 ms ✓ FillArrays → FillArraysSparseArraysExt 1061.3 ms ✓ FillArrays → FillArraysStatisticsExt 3597.3 ms ✓ DataStructures 1424.9 ms ✓ LogExpFunctions 808.4 ms ✓ TableTraits 937.9 ms ✓ Adapt 1483.6 ms ✓ FillArrays → FillArraysPDMatsExt 893.2 ms ✓ Compat → CompatLinearAlgebraExt 967.9 ms ✓ PrecompileTools 1297.1 ms ✓ JLLWrappers 1542.8 ms ✓ BioGenerics 2618.8 ms ✓ CodecZstd 1665.3 ms ✓ CodecZlib 1383.0 ms ✓ Distances → DistancesSparseArraysExt  [335] signal 11 (1): Segmentation fault in expression starting at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/functionlenses.jl:2 checkbounds at ./essentials.jl:381 [inlined] _iterate_abstractarray at ./abstractarray.jl:1248 [inlined] iterate at ./abstractarray.jl:1241 [inlined] iterate at ./abstractarray.jl:1241 [inlined] _foldl_impl at ./reduce.jl:54 foldl_impl at ./reduce.jl:46 mapfoldl_impl at ./reduce.jl:42 unknown function (ip: 0x7dc45333f98c) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 #mapfoldl#265 at ./reduce.jl:173 mapfoldl at ./reduce.jl:173 [inlined] #foldl#266 at ./reduce.jl:196 unknown function (ip: 0x7dc45333f86d) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_invoke at /source/src/gf.c:4120 foldl at ./reduce.jl:196 [inlined] foldtree at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/sugar.jl:139 need_dynamic_optic at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/sugar.jl:142 unknown function (ip: 0x7dc45333f612) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 _any at ./anyall.jl:124 unknown function (ip: 0x7dc45333f53e) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 #any#756 at ./reducedim.jl:993 any at ./reducedim.jl:993 unknown function (ip: 0x7dc45333ed34) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 parse_obj_optics at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/sugar.jl:205 parse_obj_optic at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/sugar.jl:278 unknown function (ip: 0x7dc453322599) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 #setmacro#67 at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/sugar.jl:321 setmacro at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/sugar.jl:312 unknown function (ip: 0x7dc45332013d) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 @set at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/sugar.jl:33 unknown function (ip: 0x7dc45331aaf9) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_invoke at /source/src/gf.c:4120 jl_invoke_julia_macro at /source/src/ast.c:1064 jl_expand_macros at /source/src/ast.c:1126 jl_expand_macros at /source/src/ast.c:1175 jl_expand_macros at /source/src/ast.c:1175 jl_fl_lower at /source/src/ast.c:1204 fl_lower at ./flfrontend.jl:24 jfptr_fl_lower_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2295 [inlined] ijl_lower at /source/src/ast.c:1271 jl_eval_toplevel_stmts at /source/src/toplevel.c:598 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:780 ijl_toplevel_eval_in at /source/src/toplevel.c:825 eval at ./boot.jl:517 include_string at ./loading.jl:3130 _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 _include at ./loading.jl:3190 include at ./Base.jl:324 IncludeInto at ./Base.jl:325 jfptr_IncludeInto_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2295 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:766 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_eval_module_expr at /source/src/toplevel.c:263 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:665 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:780 ijl_toplevel_eval_in at /source/src/toplevel.c:825 eval at ./boot.jl:517 include_string at ./loading.jl:3130 _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 _include at ./loading.jl:3190 include at ./Base.jl:323 include_package_for_output at ./loading.jl:3288 jfptr_include_package_for_output_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2295 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:766 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:780 ijl_toplevel_eval_in at /source/src/toplevel.c:825 eval at ./boot.jl:517 include_string at ./loading.jl:3130 include_string at ./loading.jl:3140 [inlined] exec_options at ./client.jl:342 _start at ./client.jl:585 jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2295 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7dc46949e249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S Allocations: 1473094 (Pool: 1473078; Big: 16); GC: 2 ✗ Accessors 1118.0 ms ✓ SortingAlgorithms 2457.3 ms ✓ QuadGK 919.1 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 1862.3 ms ✓ Tables 1206.3 ms ✓ ArrayInterface 1294.8 ms ✓ Adapt → AdaptSparseArraysExt 849.6 ms ✓ OffsetArrays → OffsetArraysAdaptExt 2189.0 ms ✓ FilePathsBase 3331.2 ms ✓ StringManipulation 14113.4 ms ✓ SIMD 16002.3 ms ✓ Parsers 6826.2 ms ✓ Static 1552.5 ms ✓ Bzip2_jll 1692.1 ms ✓ XZ_jll 1541.6 ms ✓ Rmath_jll 1503.8 ms ✓ OpenSpecFun_jll 1279.7 ms ✓ dlfcn_win32_jll 1704.3 ms ✓ BGZFStreams ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("7d9f7c33-5ae7-4f3b-8dc6-eff91059b697"), "Accessors") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2840  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2694  [4] macro expansion  @ ./loading.jl:2621 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2585  [7] require  @ ./loading.jl:2561 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_using  @ ./module.jl:137 [inlined]  [11] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [12] top-level scope  @ ~/.julia/packages/Accessors/cfsTn/ext/TestExt.jl:3  [13] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3288  [15] top-level scope  @ stdin:5  [16] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3130  [18] include_string  @ ./loading.jl:3140 [inlined]  [19] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [20] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/Accessors/cfsTn/ext/TestExt.jl:1 in expression starting at stdin:5 ✗ Accessors → TestExt ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("7d9f7c33-5ae7-4f3b-8dc6-eff91059b697"), "Accessors") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2840  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2694  [4] macro expansion  @ ./loading.jl:2621 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2585  [7] require  @ ./loading.jl:2561 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})  @ Base ./module.jl:101  [11] top-level scope  @ ~/.julia/packages/Accessors/cfsTn/ext/LinearAlgebraExt.jl:3  [12] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3288  [14] top-level scope  @ stdin:5  [15] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3130  [17] include_string  @ ./loading.jl:3140 [inlined]  [18] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [19] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/Accessors/cfsTn/ext/LinearAlgebraExt.jl:1 in expression starting at stdin:5 ✗ Accessors → LinearAlgebraExt 5090.7 ms ✓ StatsBase 966.9 ms ✓ StructUtils → StructUtilsTablesExt 1350.1 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 2902.6 ms ✓ FilePathsBase → FilePathsBaseTestExt 1006.3 ms ✓ FilePathsBase → FilePathsBaseMmapExt 40431.3 ms ✓ PrettyTables 18281.5 ms ✓ Automa 6946.2 ms ✓ JSON 971.4 ms ✓ InlineStrings → ParsersExt 961.0 ms ✓ BitTwiddlingConvenienceFunctions 2276.7 ms ✓ CPUSummary 8193.0 ms ✓ StaticArrayInterface 2145.4 ms ✓ CodecBzip2 1620.9 ms ✓ CodecXz 1546.7 ms ✓ Rmath 4712.5 ms ✓ SpecialFunctions 1483.1 ms ✓ SQLite_jll ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("7d9f7c33-5ae7-4f3b-8dc6-eff91059b697"), "Accessors") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2840  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2694  [4] macro expansion  @ ./loading.jl:2621 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2585  [7] require  @ ./loading.jl:2561 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_using  @ ./module.jl:137 [inlined]  [11] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [12] top-level scope  @ ~/.julia/packages/Roots/yr5ZP/src/Roots.jl:24  [13] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3288  [15] top-level scope  @ stdin:5  [16] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3130  [18] include_string  @ ./loading.jl:3140 [inlined]  [19] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [20] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/Roots/yr5ZP/src/Roots.jl:1 in expression starting at stdin:5 ✗ Roots 1480.3 ms ✓ PDMats → StatsBaseExt 81943.4 ms ✓ DataFrames [ Info: Compiling VCF parser... 15714.1 ms ✓ VariantCallFormat 2994.9 ms ✓ BenchmarkTools 2447.5 ms ✓ WeakRefStrings 2036.7 ms ✓ HostCPUFeatures 1738.3 ms ✓ PolyesterWeave 1100.0 ms ✓ StaticArrayInterface → StaticArrayInterfaceOffsetArraysExt 1144.3 ms ✓ CloseOpenIntervals 1357.9 ms ✓ LayoutPointers 2315.2 ms ✓ HypergeometricFunctions 27286.1 ms ✓ CSV 4188.4 ms ✓ SQLite 14849.7 ms ✓ VectorizationBase 3001.0 ms ✓ StatsFuns 4072.1 ms ✓ BGEN 3549.8 ms ✓ SLEEFPirates 1231.3 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 5013.2 ms ✓ StatsModels 9486.4 ms ✓ Distributions 38081.7 ms ✓ LoopVectorization 5441.7 ms ✓ GLM 3504.1 ms ✓ Distributions → DistributionsTestExt ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("f2b01f46-fcfa-551c-844a-d8ac1e96c665"), "Roots") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2840  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2694  [4] macro expansion  @ ./loading.jl:2621 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2585  [7] require  @ ./loading.jl:2561 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_using  @ ./module.jl:137 [inlined]  [11] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [12] top-level scope  @ ~/.julia/packages/HypothesisTests/FtZtp/src/HypothesisTests.jl:28  [13] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3288  [15] top-level scope  @ stdin:5  [16] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3130  [18] include_string  @ ./loading.jl:3140 [inlined]  [19] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [20] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/HypothesisTests/FtZtp/src/HypothesisTests.jl:25 in expression starting at stdin:5 ✗ HypothesisTests 3317.0 ms ✓ LoopVectorization → SpecialFunctionsExt ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("09f84164-cd44-5f33-b23f-e6b0d136a0d5"), "HypothesisTests") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2840  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2694  [4] macro expansion  @ ./loading.jl:2621 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2585  [7] require  @ ./loading.jl:2561 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_using  @ ./module.jl:137 [inlined]  [11] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [12] top-level scope  @ ~/.julia/packages/VCFTools/IWkMe/src/VCFTools.jl:5  [13] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3288  [15] top-level scope  @ stdin:5  [16] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3130  [18] include_string  @ ./loading.jl:3140 [inlined]  [19] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [20] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/VCFTools/IWkMe/src/VCFTools.jl:1 in expression starting at stdin:5 ✗ VCFTools 27161.3 ms ✓ SnpArrays ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("a620830f-fdd7-5ebc-8d26-3621ab35fbfe"), "VCFTools") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2840  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2694  [4] macro expansion  @ ./loading.jl:2621 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2585  [7] require  @ ./loading.jl:2561 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})  @ Base ./module.jl:101  [11] top-level scope  @ ~/.julia/packages/MendelIHT/ZcxZT/src/MendelIHT.jl:11  [12] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3288  [14] top-level scope  @ stdin:5  [15] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3130  [17] include_string  @ ./loading.jl:3140 [inlined]  [18] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [19] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/MendelIHT/ZcxZT/src/MendelIHT.jl:3 in expression starting at stdin:5 ✗ MendelIHT 127 dependencies successfully precompiled in 551 seconds. 40 already precompiled. 1 dependency had output during precompilation: ┌ VariantCallFormat │ [ Info: Compiling VCF parser... └ Precompilation completed after 577.23s ################################################################################ # Testing # Testing MendelIHT Status `/tmp/jl_DEbtJK/Project.toml` ⌅ [6db4b851] BGEN v0.1.17 [6e4b80f9] BenchmarkTools v1.6.3 [336ed68f] CSV v0.10.16 [a93c6f00] DataFrames v1.8.1 [8bb1440f] DelimitedFiles v1.9.1 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.123 [38e38edf] GLM v1.9.3 [921c7187] MendelIHT v1.4.11 [92933f4c] ProgressMeter v1.11.0 [189a3867] Reexport v1.2.2 [4e780e97] SnpArrays v0.3.23 [276daf66] SpecialFunctions v2.7.1 [2913bbd2] StatsBase v0.34.10 [a620830f] VCFTools v0.2.10 [37e2e46d] LinearAlgebra v1.13.0 [44cfe95a] Pkg v1.14.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_DEbtJK/Manifest.toml` [7d9f7c33] Accessors v0.1.43 [79e6a3ab] Adapt v4.5.0 [66dad0bd] AliasTables v1.1.3 [4fba245c] ArrayInterface v7.22.0 [67c07d97] Automa v1.1.0 ⌅ [6db4b851] BGEN v0.1.17 [28d598bf] BGZFStreams v0.3.2 [6e4b80f9] BenchmarkTools v1.6.3 [47718e42] BioGenerics v0.1.5 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [e1450e63] BufferedStreams v1.2.2 [2a0fbf3d] CPUSummary v0.2.7 [336ed68f] CSV v0.10.16 [fb6a15b2] CloseOpenIntervals v0.1.13 [523fee87] CodecBzip2 v0.8.5 [ba30903b] CodecXz v0.7.4 [944b1d66] CodecZlib v0.7.8 [6b39b394] CodecZstd v0.8.7 [861a8166] Combinatorics v1.1.0 [38540f10] CommonSolve v0.2.6 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [187b0558] ConstructionBase v1.6.0 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [a10d1c49] DBInterface v2.6.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.123 [ffbed154] DocStringExtensions v0.9.5 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.16.0 [38e38edf] GLM v1.9.3 [c27321d9] Glob v1.4.0 [3e5b6fbb] HostCPUFeatures v0.1.18 [34004b35] HypergeometricFunctions v0.3.28 [09f84164] HypothesisTests v0.11.6 [615f187c] IfElse v0.1.1 [842dd82b] InlineStrings v1.4.5 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.4.0 [b964fa9f] LaTeXStrings v1.4.0 [10f19ff3] LayoutPointers v0.1.17 [2ab3a3ac] LogExpFunctions v0.3.29 [bdcacae8] LoopVectorization v0.12.173 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [921c7187] MendelIHT v1.4.11 [e1d29d7a] Missings v1.2.0 [6fe1bfb0] OffsetArrays v1.17.0 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.37 [69de0a69] Parsers v2.8.3 [1d0040c9] PolyesterWeave v0.2.2 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.2 [08abe8d2] PrettyTables v3.2.3 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.4.0 [1fd47b50] QuadGK v2.11.2 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [f2b01f46] Roots v2.2.13 [fdea26ae] SIMD v3.7.2 [94e857df] SIMDTypes v0.1.0 [476501e8] SLEEFPirates v0.6.43 [0aa819cd] SQLite v1.8.0 [431bcebd] SciMLPublic v1.0.1 [91c51154] SentinelArrays v1.4.9 [1277b4bf] ShiftedArrays v2.0.0 [4e780e97] SnpArrays v0.3.23 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.7.1 [aedffcd0] Static v1.3.1 [0d7ed370] StaticArrayInterface v1.9.0 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.10 [4c63d2b9] StatsFuns v1.5.2 [3eaba693] StatsModels v0.7.9 [892a3eda] StringManipulation v0.4.4 [ec057cc2] StructUtils v2.6.3 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [8290d209] ThreadingUtilities v0.5.5 ⌅ [3bb67fe8] TranscodingStreams v0.9.13 [3a884ed6] UnPack v1.0.2 [a620830f] VCFTools v0.2.10 [28eba6e3] VariantCallFormat v0.5.9 [3d5dd08c] VectorizationBase v0.21.72 [ea10d353] WeakRefStrings v1.4.2 [76eceee3] WorkerUtilities v1.6.1 [6e34b625] Bzip2_jll v1.0.9+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [76ed43ae] SQLite_jll v3.51.2+0 [ffd25f8a] XZ_jll v5.8.2+0 [c4b69c83] dlfcn_win32_jll v1.4.2+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [9abbd945] Profile v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.18.0+0 [e37daf67] LibGit2_jll v1.9.2+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.30+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.5+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests...  [541] signal 11 (1): Segmentation fault in expression starting at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/functionlenses.jl:2 checkbounds at ./essentials.jl:381 [inlined] _iterate_abstractarray at ./abstractarray.jl:1248 [inlined] iterate at ./abstractarray.jl:1241 [inlined] iterate at ./abstractarray.jl:1241 [inlined] _foldl_impl at ./reduce.jl:54 foldl_impl at ./reduce.jl:46 mapfoldl_impl at ./reduce.jl:42 unknown function (ip: 0x7a3f67541b4c) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 #mapfoldl#265 at ./reduce.jl:173 mapfoldl at ./reduce.jl:173 [inlined] #foldl#266 at ./reduce.jl:196 unknown function (ip: 0x7a3f67541a2d) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_invoke at /source/src/gf.c:4120 foldl at ./reduce.jl:196 [inlined] foldtree at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/sugar.jl:139 need_dynamic_optic at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/sugar.jl:142 unknown function (ip: 0x7a3f675417d2) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 _any at ./anyall.jl:124 unknown function (ip: 0x7a3f675416fe) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 #any#756 at ./reducedim.jl:993 any at ./reducedim.jl:993 unknown function (ip: 0x7a3f67540ef4) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 parse_obj_optics at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/sugar.jl:205 parse_obj_optic at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/sugar.jl:278 unknown function (ip: 0x7a3f67524759) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 #setmacro#67 at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/sugar.jl:321 setmacro at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/sugar.jl:312 unknown function (ip: 0x7a3f675222fd) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 @set at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/sugar.jl:33 unknown function (ip: 0x7a3f6751ccb9) at (unknown file) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_invoke at /source/src/gf.c:4120 jl_invoke_julia_macro at /source/src/ast.c:1064 jl_expand_macros at /source/src/ast.c:1126 jl_expand_macros at /source/src/ast.c:1175 jl_expand_macros at /source/src/ast.c:1175 jl_fl_lower at /source/src/ast.c:1204 fl_lower at ./flfrontend.jl:24 jfptr_fl_lower_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2295 [inlined] ijl_lower at /source/src/ast.c:1271 jl_eval_toplevel_stmts at /source/src/toplevel.c:598 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:780 ijl_toplevel_eval_in at /source/src/toplevel.c:825 eval at ./boot.jl:517 include_string at ./loading.jl:3130 _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 _include at ./loading.jl:3190 include at ./Base.jl:324 IncludeInto at ./Base.jl:325 jfptr_IncludeInto_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2295 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:766 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_eval_module_expr at /source/src/toplevel.c:263 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:665 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:780 ijl_toplevel_eval_in at /source/src/toplevel.c:825 eval at ./boot.jl:517 include_string at ./loading.jl:3130 _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 _include at ./loading.jl:3190 include at ./Base.jl:323 include_package_for_output at ./loading.jl:3288 jfptr_include_package_for_output_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2295 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:766 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:780 ijl_toplevel_eval_in at /source/src/toplevel.c:825 eval at ./boot.jl:517 include_string at ./loading.jl:3130 include_string at ./loading.jl:3140 [inlined] exec_options at ./client.jl:342 _start at ./client.jl:585 jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4113 [inlined] ijl_apply_generic at /source/src/gf.c:4339 jl_apply at /source/src/julia.h:2295 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7a3f68e09249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S Allocations: 1472337 (Pool: 1472321; Big: 16); GC: 2 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("7d9f7c33-5ae7-4f3b-8dc6-eff91059b697"), "Accessors") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2840  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2694  [4] macro expansion  @ ./loading.jl:2621 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2585  [7] require  @ ./loading.jl:2561 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_using  @ ./module.jl:137 [inlined]  [11] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [12] top-level scope  @ ~/.julia/packages/Accessors/cfsTn/ext/TestExt.jl:3  [13] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3288  [15] top-level scope  @ stdin:5  [16] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3130  [18] include_string  @ ./loading.jl:3140 [inlined]  [19] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [20] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/Accessors/cfsTn/ext/TestExt.jl:1 in expression starting at stdin:5 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("7d9f7c33-5ae7-4f3b-8dc6-eff91059b697"), "Accessors") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2840  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2694  [4] macro expansion  @ ./loading.jl:2621 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2585  [7] require  @ ./loading.jl:2561 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})  @ Base ./module.jl:101  [11] top-level scope  @ ~/.julia/packages/Accessors/cfsTn/ext/LinearAlgebraExt.jl:3  [12] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3288  [14] top-level scope  @ stdin:5  [15] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3130  [17] include_string  @ ./loading.jl:3140 [inlined]  [18] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [19] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/Accessors/cfsTn/ext/LinearAlgebraExt.jl:1 in expression starting at stdin:5 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("7d9f7c33-5ae7-4f3b-8dc6-eff91059b697"), "Accessors") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2840  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2694  [4] macro expansion  @ ./loading.jl:2621 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2585  [7] require  @ ./loading.jl:2561 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_using  @ ./module.jl:137 [inlined]  [11] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [12] top-level scope  @ ~/.julia/packages/Roots/yr5ZP/src/Roots.jl:24  [13] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3288  [15] top-level scope  @ stdin:5  [16] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3130  [18] include_string  @ ./loading.jl:3140 [inlined]  [19] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [20] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/Roots/yr5ZP/src/Roots.jl:1 in expression starting at stdin:5 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("f2b01f46-fcfa-551c-844a-d8ac1e96c665"), "Roots") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2840  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2694  [4] macro expansion  @ ./loading.jl:2621 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2585  [7] require  @ ./loading.jl:2561 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_using  @ ./module.jl:137 [inlined]  [11] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [12] top-level scope  @ ~/.julia/packages/HypothesisTests/FtZtp/src/HypothesisTests.jl:28  [13] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3288  [15] top-level scope  @ stdin:5  [16] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3130  [18] include_string  @ ./loading.jl:3140 [inlined]  [19] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [20] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/HypothesisTests/FtZtp/src/HypothesisTests.jl:25 in expression starting at stdin:5 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("09f84164-cd44-5f33-b23f-e6b0d136a0d5"), "HypothesisTests") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2840  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2694  [4] macro expansion  @ ./loading.jl:2621 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2585  [7] require  @ ./loading.jl:2561 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_using  @ ./module.jl:137 [inlined]  [11] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [12] top-level scope  @ ~/.julia/packages/VCFTools/IWkMe/src/VCFTools.jl:5  [13] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3288  [15] top-level scope  @ stdin:5  [16] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3130  [18] include_string  @ ./loading.jl:3140 [inlined]  [19] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [20] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/VCFTools/IWkMe/src/VCFTools.jl:1 in expression starting at stdin:5 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("a620830f-fdd7-5ebc-8d26-3621ab35fbfe"), "VCFTools") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2840  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2694  [4] macro expansion  @ ./loading.jl:2621 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2585  [7] require  @ ./loading.jl:2561 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})  @ Base ./module.jl:101  [11] top-level scope  @ ~/.julia/packages/MendelIHT/ZcxZT/src/MendelIHT.jl:11  [12] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3288  [14] top-level scope  @ stdin:5  [15] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3130  [17] include_string  @ ./loading.jl:3140 [inlined]  [18] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [19] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/MendelIHT/ZcxZT/src/MendelIHT.jl:3 in expression starting at stdin:5 7 dependencies had output during precompilation: ┌ HypothesisTests │ ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("f2b01f46-fcfa-551c-844a-d8ac1e96c665"), "Roots") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:56 │ [2] __require_prelocked(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2840 │ [3] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2694 │ [4] macro expansion │ @ ./loading.jl:2621 [inlined] │ [5] macro expansion │ @ ./lock.jl:376 [inlined] │ [6] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2585 │ [7] require │ @ ./loading.jl:2561 [inlined] │ [8] eval_import_path │ @ ./module.jl:36 [inlined] │ [9] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [10] _eval_using │ @ ./module.jl:137 [inlined] │ [11] _eval_using(to::Module, path::Expr) │ @ Base ./module.jl:137 │ [12] top-level scope │ @ ~/.julia/packages/HypothesisTests/FtZtp/src/HypothesisTests.jl:28 │ [13] include(mod::Module, _path::String) │ @ Base ./Base.jl:323 │ [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base ./loading.jl:3288 │ [15] top-level scope │ @ stdin:5 │ [16] eval(m::Module, e::Any) │ @ Core ./boot.jl:517 │ [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:3130 │ [18] include_string │ @ ./loading.jl:3140 [inlined] │ [19] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:342 │ [20] _start() │ @ Base ./client.jl:585 │ in expression starting at /home/pkgeval/.julia/packages/HypothesisTests/FtZtp/src/HypothesisTests.jl:25 │ in expression starting at stdin:5 └ ┌ Accessors │ [541] signal 11 (1): Segmentation fault │ in expression starting at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/functionlenses.jl:2 │ checkbounds at ./essentials.jl:381 [inlined] │ _iterate_abstractarray at ./abstractarray.jl:1248 [inlined] │ iterate at ./abstractarray.jl:1241 [inlined] │ iterate at ./abstractarray.jl:1241 [inlined] │ _foldl_impl at ./reduce.jl:54 │ foldl_impl at ./reduce.jl:46 │ mapfoldl_impl at ./reduce.jl:42 │ unknown function (ip: 0x7a3f67541b4c) at (unknown file) │ _jl_invoke at /source/src/gf.c:4113 [inlined] │ ijl_apply_generic at /source/src/gf.c:4339 │ #mapfoldl#265 at ./reduce.jl:173 │ mapfoldl at ./reduce.jl:173 [inlined] │ #foldl#266 at ./reduce.jl:196 │ unknown function (ip: 0x7a3f67541a2d) at (unknown file) │ _jl_invoke at /source/src/gf.c:4113 [inlined] │ ijl_invoke at /source/src/gf.c:4120 │ foldl at ./reduce.jl:196 [inlined] │ foldtree at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/sugar.jl:139 │ need_dynamic_optic at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/sugar.jl:142 │ unknown function (ip: 0x7a3f675417d2) at (unknown file) │ _jl_invoke at /source/src/gf.c:4113 [inlined] │ ijl_apply_generic at /source/src/gf.c:4339 │ _any at ./anyall.jl:124 │ unknown function (ip: 0x7a3f675416fe) at (unknown file) │ _jl_invoke at /source/src/gf.c:4113 [inlined] │ ijl_apply_generic at /source/src/gf.c:4339 │ #any#756 at ./reducedim.jl:993 │ any at ./reducedim.jl:993 │ unknown function (ip: 0x7a3f67540ef4) at (unknown file) │ _jl_invoke at /source/src/gf.c:4113 [inlined] │ ijl_apply_generic at /source/src/gf.c:4339 │ parse_obj_optics at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/sugar.jl:205 │ parse_obj_optic at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/sugar.jl:278 │ unknown function (ip: 0x7a3f67524759) at (unknown file) │ _jl_invoke at /source/src/gf.c:4113 [inlined] │ ijl_apply_generic at /source/src/gf.c:4339 │ #setmacro#67 at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/sugar.jl:321 │ setmacro at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/sugar.jl:312 │ unknown function (ip: 0x7a3f675222fd) at (unknown file) │ _jl_invoke at /source/src/gf.c:4113 [inlined] │ ijl_apply_generic at /source/src/gf.c:4339 │ @set at /home/pkgeval/.julia/packages/Accessors/cfsTn/src/sugar.jl:33 │ unknown function (ip: 0x7a3f6751ccb9) at (unknown file) │ _jl_invoke at /source/src/gf.c:4113 [inlined] │ ijl_invoke at /source/src/gf.c:4120 │ jl_invoke_julia_macro at /source/src/ast.c:1064 │ jl_expand_macros at /source/src/ast.c:1126 │ jl_expand_macros at /source/src/ast.c:1175 │ jl_expand_macros at /source/src/ast.c:1175 │ jl_fl_lower at /source/src/ast.c:1204 │ fl_lower at ./flfrontend.jl:24 │ jfptr_fl_lower_1.1 at /opt/julia/lib/julia/sys.so (unknown line) │ _jl_invoke at /source/src/gf.c:4113 [inlined] │ ijl_apply_generic at /source/src/gf.c:4339 │ jl_apply at /source/src/julia.h:2295 [inlined] │ ijl_lower at /source/src/ast.c:1271 │ jl_eval_toplevel_stmts at /source/src/toplevel.c:598 │ jl_toplevel_eval_flex at /source/src/toplevel.c:684 │ ijl_toplevel_eval at /source/src/toplevel.c:780 │ ijl_toplevel_eval_in at /source/src/toplevel.c:825 │ eval at ./boot.jl:517 │ include_string at ./loading.jl:3130 │ _jl_invoke at /source/src/gf.c:4113 [inlined] │ ijl_apply_generic at /source/src/gf.c:4339 │ _include at ./loading.jl:3190 │ include at ./Base.jl:324 │ IncludeInto at ./Base.jl:325 │ jfptr_IncludeInto_1.1 at /opt/julia/lib/julia/sys.so (unknown line) │ _jl_invoke at /source/src/gf.c:4113 [inlined] │ ijl_apply_generic at /source/src/gf.c:4339 │ jl_apply at /source/src/julia.h:2295 [inlined] │ do_call at /source/src/interpreter.c:123 │ eval_value at /source/src/interpreter.c:243 │ eval_stmt_value at /source/src/interpreter.c:194 [inlined] │ eval_body at /source/src/interpreter.c:693 │ jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 │ ijl_eval_thunk at /source/src/toplevel.c:766 │ jl_toplevel_eval_flex at /source/src/toplevel.c:712 │ jl_eval_toplevel_stmts at /source/src/toplevel.c:602 │ jl_eval_module_expr at /source/src/toplevel.c:263 [inlined] │ jl_toplevel_eval_flex at /source/src/toplevel.c:665 │ jl_eval_toplevel_stmts at /source/src/toplevel.c:602 │ jl_toplevel_eval_flex at /source/src/toplevel.c:684 │ ijl_toplevel_eval at /source/src/toplevel.c:780 │ ijl_toplevel_eval_in at /source/src/toplevel.c:825 │ eval at ./boot.jl:517 │ include_string at ./loading.jl:3130 │ _jl_invoke at /source/src/gf.c:4113 [inlined] │ ijl_apply_generic at /source/src/gf.c:4339 │ _include at ./loading.jl:3190 │ include at ./Base.jl:323 │ include_package_for_output at ./loading.jl:3288 │ jfptr_include_package_for_output_1.1 at /opt/julia/lib/julia/sys.so (unknown line) │ _jl_invoke at /source/src/gf.c:4113 [inlined] │ ijl_apply_generic at /source/src/gf.c:4339 │ jl_apply at /source/src/julia.h:2295 [inlined] │ do_call at /source/src/interpreter.c:123 │ eval_value at /source/src/interpreter.c:243 │ eval_stmt_value at /source/src/interpreter.c:194 [inlined] │ eval_body at /source/src/interpreter.c:693 │ jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 │ ijl_eval_thunk at /source/src/toplevel.c:766 │ jl_toplevel_eval_flex at /source/src/toplevel.c:712 │ jl_eval_toplevel_stmts at /source/src/toplevel.c:602 │ jl_toplevel_eval_flex at /source/src/toplevel.c:684 │ ijl_toplevel_eval at /source/src/toplevel.c:780 │ ijl_toplevel_eval_in at /source/src/toplevel.c:825 │ eval at ./boot.jl:517 │ include_string at ./loading.jl:3130 │ include_string at ./loading.jl:3140 [inlined] │ exec_options at ./client.jl:342 │ _start at ./client.jl:585 │ jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) │ _jl_invoke at /source/src/gf.c:4113 [inlined] │ ijl_apply_generic at /source/src/gf.c:4339 │ jl_apply at /source/src/julia.h:2295 [inlined] │ true_main at /source/src/jlapi.c:971 │ jl_repl_entrypoint at /source/src/jlapi.c:1138 │ main at /source/cli/loader_exe.c:58 │ unknown function (ip: 0x7a3f68e09249) at /lib/x86_64-linux-gnu/libc.so.6 │ __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) │ unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S │ Allocations: 1472337 (Pool: 1472321; Big: 16); GC: 2 └ ┌ Accessors → TestExt │ ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("7d9f7c33-5ae7-4f3b-8dc6-eff91059b697"), "Accessors") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:56 │ [2] __require_prelocked(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2840 │ [3] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2694 │ [4] macro expansion │ @ ./loading.jl:2621 [inlined] │ [5] macro expansion │ @ ./lock.jl:376 [inlined] │ [6] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2585 │ [7] require │ @ ./loading.jl:2561 [inlined] │ [8] eval_import_path │ @ ./module.jl:36 [inlined] │ [9] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [10] _eval_using │ @ ./module.jl:137 [inlined] │ [11] _eval_using(to::Module, path::Expr) │ @ Base ./module.jl:137 │ [12] top-level scope │ @ ~/.julia/packages/Accessors/cfsTn/ext/TestExt.jl:3 │ [13] include(mod::Module, _path::String) │ @ Base ./Base.jl:323 │ [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base ./loading.jl:3288 │ [15] top-level scope │ @ stdin:5 │ [16] eval(m::Module, e::Any) │ @ Core ./boot.jl:517 │ [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:3130 │ [18] include_string │ @ ./loading.jl:3140 [inlined] │ [19] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:342 │ [20] _start() │ @ Base ./client.jl:585 │ in expression starting at /home/pkgeval/.julia/packages/Accessors/cfsTn/ext/TestExt.jl:1 │ in expression starting at stdin:5 └ ┌ Accessors → LinearAlgebraExt │ ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("7d9f7c33-5ae7-4f3b-8dc6-eff91059b697"), "Accessors") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:56 │ [2] __require_prelocked(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2840 │ [3] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2694 │ [4] macro expansion │ @ ./loading.jl:2621 [inlined] │ [5] macro expansion │ @ ./lock.jl:376 [inlined] │ [6] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2585 │ [7] require │ @ ./loading.jl:2561 [inlined] │ [8] eval_import_path │ @ ./module.jl:36 [inlined] │ [9] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [10] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr}) │ @ Base ./module.jl:101 │ [11] top-level scope │ @ ~/.julia/packages/Accessors/cfsTn/ext/LinearAlgebraExt.jl:3 │ [12] include(mod::Module, _path::String) │ @ Base ./Base.jl:323 │ [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base ./loading.jl:3288 │ [14] top-level scope │ @ stdin:5 │ [15] eval(m::Module, e::Any) │ @ Core ./boot.jl:517 │ [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:3130 │ [17] include_string │ @ ./loading.jl:3140 [inlined] │ [18] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:342 │ [19] _start() │ @ Base ./client.jl:585 │ in expression starting at /home/pkgeval/.julia/packages/Accessors/cfsTn/ext/LinearAlgebraExt.jl:1 │ in expression starting at stdin:5 └ ┌ Roots │ ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("7d9f7c33-5ae7-4f3b-8dc6-eff91059b697"), "Accessors") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:56 │ [2] __require_prelocked(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2840 │ [3] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2694 │ [4] macro expansion │ @ ./loading.jl:2621 [inlined] │ [5] macro expansion │ @ ./lock.jl:376 [inlined] │ [6] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2585 │ [7] require │ @ ./loading.jl:2561 [inlined] │ [8] eval_import_path │ @ ./module.jl:36 [inlined] │ [9] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [10] _eval_using │ @ ./module.jl:137 [inlined] │ [11] _eval_using(to::Module, path::Expr) │ @ Base ./module.jl:137 │ [12] top-level scope │ @ ~/.julia/packages/Roots/yr5ZP/src/Roots.jl:24 │ [13] include(mod::Module, _path::String) │ @ Base ./Base.jl:323 │ [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base ./loading.jl:3288 │ [15] top-level scope │ @ stdin:5 │ [16] eval(m::Module, e::Any) │ @ Core ./boot.jl:517 │ [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:3130 │ [18] include_string │ @ ./loading.jl:3140 [inlined] │ [19] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:342 │ [20] _start() │ @ Base ./client.jl:585 │ in expression starting at /home/pkgeval/.julia/packages/Roots/yr5ZP/src/Roots.jl:1 │ in expression starting at stdin:5 └ ┌ MendelIHT │ [Output was shown above] └ ┌ VCFTools │ ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("09f84164-cd44-5f33-b23f-e6b0d136a0d5"), "HypothesisTests") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:56 │ [2] __require_prelocked(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2840 │ [3] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2694 │ [4] macro expansion │ @ ./loading.jl:2621 [inlined] │ [5] macro expansion │ @ ./lock.jl:376 [inlined] │ [6] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2585 │ [7] require │ @ ./loading.jl:2561 [inlined] │ [8] eval_import_path │ @ ./module.jl:36 [inlined] │ [9] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [10] _eval_using │ @ ./module.jl:137 [inlined] │ [11] _eval_using(to::Module, path::Expr) │ @ Base ./module.jl:137 │ [12] top-level scope │ @ ~/.julia/packages/VCFTools/IWkMe/src/VCFTools.jl:5 │ [13] include(mod::Module, _path::String) │ @ Base ./Base.jl:323 │ [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base ./loading.jl:3288 │ [15] top-level scope │ @ stdin:5 │ [16] eval(m::Module, e::Any) │ @ Core ./boot.jl:517 │ [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:3130 │ [18] include_string │ @ ./loading.jl:3140 [inlined] │ [19] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:342 │ [20] _start() │ @ Base ./client.jl:585 │ in expression starting at /home/pkgeval/.julia/packages/VCFTools/IWkMe/src/VCFTools.jl:1 │ in expression starting at stdin:5 └ ERROR: LoadError: The following 7 packages failed to precompile: HypothesisTests Failed to precompile HypothesisTests [09f84164-cd44-5f33-b23f-e6b0d136a0d5] to "/home/pkgeval/.julia/compiled/v1.14/HypothesisTests/jl_IIWXrq" (ProcessExited(1)). Accessors Failed to precompile Accessors [7d9f7c33-5ae7-4f3b-8dc6-eff91059b697] to "/home/pkgeval/.julia/compiled/v1.14/Accessors/jl_0DPrwV" (ProcessSignaled(11)). Accessors → TestExt Failed to precompile TestExt [80cb845e-b389-59f1-b05e-94f5b8a87482] to "/home/pkgeval/.julia/compiled/v1.14/TestExt/jl_9CO8qI" (ProcessExited(1)). Accessors → LinearAlgebraExt Failed to precompile LinearAlgebraExt [286ce1b1-6c8d-5016-ac43-97cd5558974d] to "/home/pkgeval/.julia/compiled/v1.14/LinearAlgebraExt/jl_xbUeY6" (ProcessExited(1)). Roots Failed to precompile Roots [f2b01f46-fcfa-551c-844a-d8ac1e96c665] to "/home/pkgeval/.julia/compiled/v1.14/Roots/jl_Ov0tJY" (ProcessExited(1)). MendelIHT Failed to precompile MendelIHT [921c7187-1484-5754-b919-5d3ed9ac03c4] to "/home/pkgeval/.julia/compiled/v1.14/MendelIHT/jl_GhDxJs" (ProcessExited(1)). VCFTools Failed to precompile VCFTools [a620830f-fdd7-5ebc-8d26-3621ab35fbfe] to "/home/pkgeval/.julia/compiled/v1.14/VCFTools/jl_YVe21k" (ProcessExited(1)). in expression starting at /home/pkgeval/.julia/packages/MendelIHT/ZcxZT/test/runtests.jl:1 Testing failed after 46.57s ERROR: LoadError: Package MendelIHT errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3138 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3003 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:586 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:562 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [12] include(mod::Module, _path::String) @ Base ./Base.jl:323 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:585 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 697.53s: package fails to precompile