Package evaluation to test YetAnotherSimulationSuite on Julia 1.14.0-DEV.1826 (44c835795b*) started at 2026-03-03T00:14:15.851 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 14.72s ################################################################################ # Installation # Installing YetAnotherSimulationSuite... Resolving package versions... Installed MKL_jll ───────────────────────────── v2025.2.0+0 Installed CommonWorldInvalidations ──────────── v1.0.0 Installed FastPower ─────────────────────────── v1.3.1 Installed SIMDTypes ─────────────────────────── v0.1.0 Installed ChunkCodecLibZstd ─────────────────── v1.0.0 Installed EnzymeCore ────────────────────────── v0.8.18 Installed InlineStrings ─────────────────────── v1.4.5 Installed OrderedCollections ────────────────── v1.8.1 Installed PreallocationTools ────────────────── v1.1.2 Installed OrdinaryDiffEqRosenbrock ──────────── v1.25.0 Installed Optim ─────────────────────────────── v1.13.3 Installed OrdinaryDiffEqExponentialRK ───────── v1.13.0 Installed NonlinearSolveSpectralMethods ─────── v1.6.0 Installed CpuId ─────────────────────────────── v0.3.1 Installed OrdinaryDiffEqFIRK ────────────────── v1.23.0 Installed UnitfulAtomic ─────────────────────── v1.0.0 Installed NearestNeighbors ──────────────────── v0.4.27 Installed FileIO ────────────────────────────── v1.18.0 Installed SentinelArrays ────────────────────── v1.4.9 Installed Distances ─────────────────────────── v0.10.12 Installed StaticArrayInterface ──────────────── v1.9.0 Installed NaNMath ───────────────────────────── v1.1.3 Installed OpenSpecFun_jll ───────────────────── v0.5.6+0 Installed OrdinaryDiffEqQPRK ────────────────── v1.8.0 Installed QuadGK ────────────────────────────── v2.11.2 Installed PyCall ────────────────────────────── v1.96.4 Installed WoodburyMatrices ──────────────────── v1.1.0 Installed FastBroadcast ─────────────────────── v0.3.5 Installed Tables ────────────────────────────── v1.12.1 Installed Chemfiles ─────────────────────────── v0.10.43 Installed OrdinaryDiffEqLowOrderRK ──────────── v1.10.0 Installed EnumX ─────────────────────────────── v1.0.7 Installed NonlinearSolveBase ────────────────── v2.15.0 Installed ScopedValues ──────────────────────── v1.5.0 Installed NLSolversBase ─────────────────────── v7.10.0 Installed LinearSolve ───────────────────────── v3.62.0 Installed Reexport ──────────────────────────── v1.2.2 Installed InverseFunctions ──────────────────── v0.1.17 Installed Jieko ─────────────────────────────── v0.2.1 Installed Missings ──────────────────────────── v1.2.0 Installed DiffEqBase ────────────────────────── v6.210.1 Installed BracketingNonlinearSolve ──────────── v1.11.0 Installed Static ────────────────────────────── v1.3.1 Installed LaTeXStrings ──────────────────────── v1.4.0 Installed MaybeInplace ──────────────────────── v0.1.4 Installed TableTraits ───────────────────────── v1.0.1 Installed Preferences ───────────────────────── v1.5.2 Installed OrdinaryDiffEqNordsieck ───────────── v1.9.0 Installed SortingAlgorithms ─────────────────── v1.2.2 Installed NonlinearSolve ────────────────────── v4.16.0 Installed OrdinaryDiffEqAdamsBashforthMoulton ─ v1.9.0 Installed Crayons ───────────────────────────── v4.1.1 Installed OrdinaryDiffEqLinear ──────────────── v1.10.0 Installed ADTypes ───────────────────────────── v1.21.0 Installed MacroTools ────────────────────────── v0.5.16 Installed RecursiveArrayTools ───────────────── v3.48.0 Installed DataStructures ────────────────────── v0.19.3 Installed GenericSchur ──────────────────────── v0.5.6 Installed DiffResults ───────────────────────── v1.1.0 Installed ManualMemory ──────────────────────── v0.1.8 Installed FillArrays ────────────────────────── v1.16.0 Installed AbstractTrees ─────────────────────── v0.4.5 Installed oneTBB_jll ────────────────────────── v2022.0.0+1 Installed ExprTools ─────────────────────────── v0.1.10 Installed SciMLJacobianOperators ────────────── v0.1.12 Installed StatsBase ─────────────────────────── v0.34.10 Installed AtomsBase ─────────────────────────── v0.5.2 Installed ArrayInterface ────────────────────── v7.22.0 Installed SparseMatrixColorings ─────────────── v0.4.24 Installed IntelOpenMP_jll ───────────────────── v2025.2.0+0 Installed CommonSubexpressions ──────────────── v0.3.1 Installed LayoutPointers ────────────────────── v0.1.17 Installed ConcreteStructs ───────────────────── v0.2.3 Installed StructUtils ───────────────────────── v2.6.3 Installed DataValueInterfaces ───────────────── v1.0.0 Installed Clustering ────────────────────────── v0.15.8 Installed LoggingExtras ─────────────────────── v1.2.0 Installed TruncatedStacktraces ──────────────── v1.4.0 Installed GPUArraysCore ─────────────────────── v0.2.0 Installed IntegerMathUtils ──────────────────── v0.1.3 Installed IrrationalConstants ───────────────── v0.2.6 Installed OrdinaryDiffEqStabilizedIRK ───────── v1.11.0 Installed OrdinaryDiffEqExtrapolation ───────── v1.16.0 Installed OrdinaryDiffEqRKN ─────────────────── v1.10.0 Installed Setfield ──────────────────────────── v1.1.2 Installed PooledArrays ──────────────────────── v1.4.3 Installed Interpolations ────────────────────── v0.16.2 Installed Moshi ─────────────────────────────── v0.3.7 Installed OrdinaryDiffEqPRK ─────────────────── v1.8.0 Installed PDMats ────────────────────────────── v0.11.37 Installed NonlinearSolveQuasiNewton ─────────── v1.12.0 Installed OrdinaryDiffEqHighOrderRK ─────────── v1.9.0 Installed CompositionsBase ──────────────────── v0.1.2 Installed DocStringExtensions ───────────────── v0.9.5 Installed CommonSolve ───────────────────────── v0.2.6 Installed ForwardDiff ───────────────────────── v1.3.2 Installed Rmath_jll ─────────────────────────── v0.5.1+0 Installed DifferentiationInterface ──────────── v0.7.16 Installed OrdinaryDiffEq ────────────────────── v6.108.0 Installed KernelDensity ─────────────────────── v0.6.11 Installed OrdinaryDiffEqStabilizedRK ────────── v1.8.0 Installed VersionParsing ────────────────────── v1.3.0 Installed BitTwiddlingConvenienceFunctions ──── v0.1.6 Installed AliasTables ───────────────────────── v1.1.3 Installed LineSearch ────────────────────────── v0.1.6 Installed HashArrayMappedTries ──────────────── v0.2.0 Installed IteratorInterfaceExtensions ───────── v1.0.0 Installed FunctionWrappersWrappers ──────────── v0.1.3 Installed RecipesBase ───────────────────────── v1.3.4 Installed SciMLOperators ────────────────────── v1.15.1 Installed DataAPI ───────────────────────────── v1.16.0 Installed YetAnotherSimulationSuite ─────────── v0.1.2 Installed OrdinaryDiffEqSymplecticRK ────────── v1.11.0 Installed Conda ─────────────────────────────── v1.10.3 Installed SciMLStructures ───────────────────── v1.10.0 Installed InvertedIndices ───────────────────── v1.3.1 Installed OrdinaryDiffEqBDF ─────────────────── v1.22.0 Installed FastGaussQuadrature ───────────────── v1.1.0 Installed StaticArraysCore ──────────────────── v1.4.4 Installed OrdinaryDiffEqLowStorageRK ────────── v1.12.0 Installed StaticArrays ──────────────────────── v1.9.17 Installed AbstractFFTs ──────────────────────── v1.5.0 Installed AxisAlgorithms ────────────────────── v1.1.0 Installed SciMLPublic ───────────────────────── v1.0.1 Installed Krylov ────────────────────────────── v0.10.5 Installed FunctionWrappers ──────────────────── v1.1.3 Installed LogExpFunctions ───────────────────── v0.3.29 Installed DiffRules ─────────────────────────── v1.15.1 Installed Requires ──────────────────────────── v1.3.1 Installed OrdinaryDiffEqNonlinearSolve ──────── v1.23.0 Installed StringManipulation ────────────────── v0.4.4 Installed OrdinaryDiffEqDifferentiation ─────── v2.2.0 Installed Distributions ─────────────────────── v0.25.123 Installed Parsers ───────────────────────────── v2.8.3 Installed JSON ──────────────────────────────── v1.4.0 Installed OrdinaryDiffEqCore ────────────────── v3.12.0 Installed PrettyTables ──────────────────────── v3.2.3 Installed Rmath ─────────────────────────────── v0.9.0 Installed SciMLBase ─────────────────────────── v2.148.0 Installed OrdinaryDiffEqExplicitRK ──────────── v1.9.0 Installed FiniteDiff ────────────────────────── v2.29.0 Installed FastClosures ──────────────────────── v0.3.2 Installed NonlinearSolveFirstOrder ──────────── v2.0.0 Installed CloseOpenIntervals ────────────────── v0.1.13 Installed Polyester ─────────────────────────── v0.7.19 Installed OrdinaryDiffEqIMEXMultistep ───────── v1.12.0 Installed StatsFuns ─────────────────────────── v1.5.2 Installed OrdinaryDiffEqFeagin ──────────────── v1.8.0 Installed JLLWrappers ───────────────────────── v1.7.1 Installed Primes ────────────────────────────── v0.5.7 Installed Unitful ───────────────────────────── v1.28.0 Installed OrdinaryDiffEqPDIRK ───────────────── v1.11.0 Installed ChunkCodecCore ────────────────────── v1.0.1 Installed OrdinaryDiffEqSSPRK ───────────────── v1.11.0 Installed ThreadingUtilities ────────────────── v0.5.5 Installed OrdinaryDiffEqSDIRK ───────────────── v1.12.0 Installed Accessors ─────────────────────────── v0.1.43 Installed Chemfiles_jll ─────────────────────── v0.10.4+0 Installed Adapt ─────────────────────────────── v4.4.0 Installed FFTA ──────────────────────────────── v0.3.1 Installed OrdinaryDiffEqVerner ──────────────── v1.11.0 Installed RuntimeGeneratedFunctions ─────────── v0.5.17 Installed JLD2 ──────────────────────────────── v0.6.3 Installed ExponentialUtilities ──────────────── v1.30.0 Installed DataFrames ────────────────────────── v1.8.1 Installed OrdinaryDiffEqDefault ─────────────── v1.13.0 Installed ConstructionBase ──────────────────── v1.6.0 Installed Compat ────────────────────────────── v4.18.1 Installed HypergeometricFunctions ───────────── v0.3.28 Installed PositiveFactorizations ────────────── v0.2.4 Installed SymbolicIndexingInterface ─────────── v0.3.46 Installed PeriodicTable ─────────────────────── v1.2.1 Installed StrideArraysCore ──────────────────── v0.5.8 Installed Statistics ────────────────────────── v1.11.1 Installed StatsAPI ──────────────────────────── v1.8.0 Installed TimerOutputs ──────────────────────── v0.5.29 Installed Ratios ────────────────────────────── v0.4.5 Installed OffsetArrays ──────────────────────── v1.17.0 Installed CPUSummary ────────────────────────── v0.2.7 Installed ExproniconLite ────────────────────── v0.10.14 Installed ChainRulesCore ────────────────────── v1.26.0 Installed PrecompileTools ───────────────────── v1.3.3 Installed IfElse ────────────────────────────── v0.1.1 Installed MuladdMacro ───────────────────────── v0.2.4 Installed FFTW ──────────────────────────────── v1.10.0 Installed ChunkCodecLibZlib ─────────────────── v1.0.0 Installed PtrArrays ─────────────────────────── v1.4.0 Installed SimpleNonlinearSolve ──────────────── v2.11.0 Installed SpecialFunctions ──────────────────── v2.7.1 Installed SciMLLogging ──────────────────────── v1.9.1 Installed FFTW_jll ──────────────────────────── v3.3.11+0 Installed OrdinaryDiffEqTsit5 ───────────────── v1.9.0 Installed LineSearches ──────────────────────── v7.5.1 Installed PolyesterWeave ────────────────────── v0.2.2 Installed OrdinaryDiffEqFunctionMap ─────────── v1.9.0 Installing 4 artifacts Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact FFTW 2.2 MiB Installed artifact Chemfiles 1.6 MiB Updating `~/.julia/environments/v1.14/Project.toml` [d3ec4d54] + YetAnotherSimulationSuite v0.1.2 Updating `~/.julia/environments/v1.14/Manifest.toml` [47edcb42] + ADTypes v1.21.0 [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.43 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.22.0 [a963bdd2] + AtomsBase v0.5.2 [13072b0f] + AxisAlgorithms v1.1.0 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] + BracketingNonlinearSolve v1.11.0 [2a0fbf3d] + CPUSummary v0.2.7 [d360d2e6] + ChainRulesCore v1.26.0 [46823bd8] + Chemfiles v0.10.43 [0b6fb165] + ChunkCodecCore v1.0.1 [4c0bbee4] + ChunkCodecLibZlib v1.0.0 [55437552] + ChunkCodecLibZstd v1.0.0 [fb6a15b2] + CloseOpenIntervals v0.1.13 [aaaa29a8] + Clustering v0.15.8 [38540f10] + CommonSolve v0.2.6 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [8f4d0f93] + Conda v1.10.3 [187b0558] + ConstructionBase v1.6.0 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [2b5f629d] + DiffEqBase v6.210.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.16 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.7 [f151be2c] + EnzymeCore v0.8.18 [d4d017d3] + ExponentialUtilities v1.30.0 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [b86e33f2] + FFTA v0.3.1 [7a1cc6ca] + FFTW v1.10.0 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [442a2c76] + FastGaussQuadrature v1.1.0 [a4df4552] + FastPower v1.3.1 [5789e2e9] + FileIO v1.18.0 [1a297f60] + FillArrays v1.16.0 [6a86dc24] + FiniteDiff v2.29.0 [f6369f11] + ForwardDiff v1.3.2 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [46192b85] + GPUArraysCore v0.2.0 [c145ed77] + GenericSchur v0.5.6 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [842dd82b] + InlineStrings v1.4.5 [18e54dd8] + IntegerMathUtils v0.1.3 [a98d9a8b] + Interpolations v0.16.2 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [033835bb] + JLD2 v0.6.3 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v1.4.0 [ae98c720] + Jieko v0.2.1 [5ab0869b] + KernelDensity v0.6.11 [ba0b0d4f] + Krylov v0.10.5 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 [87fe0de2] + LineSearch v0.1.6 ⌃ [d3d80556] + LineSearches v7.5.1 [7ed4a6bd] + LinearSolve v3.62.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [bb5d69b7] + MaybeInplace v0.1.4 [e1d29d7a] + Missings v1.2.0 [2e0e35c7] + Moshi v0.3.7 [46d2c3a1] + MuladdMacro v0.2.4 ⌅ [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [b8a86587] + NearestNeighbors v0.4.27 [8913a72c] + NonlinearSolve v4.16.0 [be0214bd] + NonlinearSolveBase v2.15.0 [5959db7a] + NonlinearSolveFirstOrder v2.0.0 [9a2c21bd] + NonlinearSolveQuasiNewton v1.12.0 [26075421] + NonlinearSolveSpectralMethods v1.6.0 [6fe1bfb0] + OffsetArrays v1.17.0 ⌅ [429524aa] + Optim v1.13.3 [bac558e1] + OrderedCollections v1.8.1 [1dea7af3] + OrdinaryDiffEq v6.108.0 [89bda076] + OrdinaryDiffEqAdamsBashforthMoulton v1.9.0 [6ad6398a] + OrdinaryDiffEqBDF v1.22.0 [bbf590c4] + OrdinaryDiffEqCore v3.12.0 [50262376] + OrdinaryDiffEqDefault v1.13.0 [4302a76b] + OrdinaryDiffEqDifferentiation v2.2.0 [9286f039] + OrdinaryDiffEqExplicitRK v1.9.0 [e0540318] + OrdinaryDiffEqExponentialRK v1.13.0 [becaefa8] + OrdinaryDiffEqExtrapolation v1.16.0 [5960d6e9] + OrdinaryDiffEqFIRK v1.23.0 [101fe9f7] + OrdinaryDiffEqFeagin v1.8.0 [d3585ca7] + OrdinaryDiffEqFunctionMap v1.9.0 [d28bc4f8] + OrdinaryDiffEqHighOrderRK v1.9.0 [9f002381] + OrdinaryDiffEqIMEXMultistep v1.12.0 [521117fe] + OrdinaryDiffEqLinear v1.10.0 [1344f307] + OrdinaryDiffEqLowOrderRK v1.10.0 [b0944070] + OrdinaryDiffEqLowStorageRK v1.12.0 [127b3ac7] + OrdinaryDiffEqNonlinearSolve v1.23.0 [c9986a66] + OrdinaryDiffEqNordsieck v1.9.0 [5dd0a6cf] + OrdinaryDiffEqPDIRK v1.11.0 [5b33eab2] + OrdinaryDiffEqPRK v1.8.0 [04162be5] + OrdinaryDiffEqQPRK v1.8.0 [af6ede74] + OrdinaryDiffEqRKN v1.10.0 [43230ef6] + OrdinaryDiffEqRosenbrock v1.25.0 [2d112036] + OrdinaryDiffEqSDIRK v1.12.0 [669c94d9] + OrdinaryDiffEqSSPRK v1.11.0 [e3e12d00] + OrdinaryDiffEqStabilizedIRK v1.11.0 [358294b1] + OrdinaryDiffEqStabilizedRK v1.8.0 [fa646aed] + OrdinaryDiffEqSymplecticRK v1.11.0 [b1df2697] + OrdinaryDiffEqTsit5 v1.9.0 [79d7bb75] + OrdinaryDiffEqVerner v1.11.0 [90014a1f] + PDMats v0.11.37 [69de0a69] + Parsers v2.8.3 [7b2266bf] + PeriodicTable v1.2.1 [f517fe37] + Polyester v0.7.19 [1d0040c9] + PolyesterWeave v0.2.2 [2dfb63ee] + PooledArrays v1.4.3 [85a6dd25] + PositiveFactorizations v0.2.4 [d236fae5] + PreallocationTools v1.1.2 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.2 [08abe8d2] + PrettyTables v3.2.3 [27ebfcd6] + Primes v0.5.7 [43287f4e] + PtrArrays v1.4.0 [438e738f] + PyCall v1.96.4 [1fd47b50] + QuadGK v2.11.2 [c84ed2f1] + Ratios v0.4.5 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.48.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [7e49a35a] + RuntimeGeneratedFunctions v0.5.17 [94e857df] + SIMDTypes v0.1.0 [0bca4576] + SciMLBase v2.148.0 [19f34311] + SciMLJacobianOperators v0.1.12 [a6db7da4] + SciMLLogging v1.9.1 [c0aeaf25] + SciMLOperators v1.15.1 [431bcebd] + SciMLPublic v1.0.1 [53ae85a6] + SciMLStructures v1.10.0 [7e506255] + ScopedValues v1.5.0 [91c51154] + SentinelArrays v1.4.9 [efcf1570] + Setfield v1.1.2 [727e6d20] + SimpleNonlinearSolve v2.11.0 [a2af1166] + SortingAlgorithms v1.2.2 [0a514795] + SparseMatrixColorings v0.4.24 [276daf66] + SpecialFunctions v2.7.1 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.9.0 [90137ffa] + StaticArrays v1.9.17 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [7792a7ef] + StrideArraysCore v0.5.8 [892a3eda] + StringManipulation v0.4.4 [ec057cc2] + StructUtils v2.6.3 [2efcf032] + SymbolicIndexingInterface v0.3.46 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [8290d209] + ThreadingUtilities v0.5.5 [a759f4b9] + TimerOutputs v0.5.29 [781d530d] + TruncatedStacktraces v1.4.0 [1986cc42] + Unitful v1.28.0 [a7773ee8] + UnitfulAtomic v1.0.0 [81def892] + VersionParsing v1.3.0 [efce3f68] + WoodburyMatrices v1.1.0 [d3ec4d54] + YetAnotherSimulationSuite v0.1.2 [78a364fa] + Chemfiles_jll v0.10.4+0 [f5851436] + FFTW_jll v3.3.11+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [856f044c] + MKL_jll v2025.2.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.18.0+0 [e37daf67] + LibGit2_jll v1.9.2+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.12.2 [4536629a] + OpenBLAS_jll v0.3.30+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.5+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building Conda ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/8f06b0cfa4c514c7b9546756dbae91fcfbc92dc9/build.log` Building PyCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9816a3826b0ebf49ab4926e2b18842ad8b5c8f04/build.log` Installation completed after 121.97s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4285.3 ms ✓ TestEnv 1 dependency successfully precompiled in 4 seconds. 27 already precompiled. Precompiling package dependencies... Precompiling packages... 4619.4 ms ✓ MacroTools 1708.4 ms ✓ InlineStrings 844.2 ms ✓ Reexport 1186.8 ms ✓ ConstructionBase 2169.3 ms ✓ IrrationalConstants 779.0 ms ✓ DataValueInterfaces 896.9 ms ✓ StatsAPI 953.9 ms ✓ VersionParsing 822.0 ms ✓ CommonSolve 942.8 ms ✓ LaTeXStrings 1027.1 ms ✓ ChunkCodecCore 1171.9 ms ✓ Statistics 1030.4 ms ✓ StaticArraysCore 1486.2 ms ✓ EnzymeCore 819.1 ms ✓ IfElse 835.8 ms ✓ PtrArrays 954.3 ms ✓ ManualMemory 990.9 ms ✓ PositiveFactorizations 912.0 ms ✓ DataAPI 899.5 ms ✓ SciMLPublic 3741.0 ms ✓ ExproniconLite 814.3 ms ✓ CommonWorldInvalidations 856.0 ms ✓ FastPower 908.6 ms ✓ InvertedIndices 962.7 ms ✓ InverseFunctions 839.0 ms ✓ CompositionsBase 1109.0 ms ✓ AbstractTrees 833.2 ms ✓ MuladdMacro 1040.5 ms ✓ AbstractFFTs 899.9 ms ✓ EnumX 2088.3 ms ✓ FillArrays 864.7 ms ✓ ExprTools 822.5 ms ✓ IntegerMathUtils 809.2 ms ✓ ConcreteStructs 1250.1 ms ✓ OrderedCollections 1504.8 ms ✓ FunctionWrappers 951.8 ms ✓ HashArrayMappedTries 1452.1 ms ✓ ADTypes 1097.2 ms ✓ DocStringExtensions 857.5 ms ✓ FastClosures 1607.3 ms ✓ OffsetArrays 754.6 ms ✓ SIMDTypes 846.8 ms ✓ IteratorInterfaceExtensions 1836.0 ms ✓ Crayons 14858.0 ms ✓ Krylov 2443.4 ms ✓ GenericSchur 1023.2 ms ✓ NaNMath 1206.0 ms ✓ Requires 1715.2 ms ✓ CpuId 1855.7 ms ✓ PDMats 1423.2 ms ✓ WoodburyMatrices 33422.5 ms ✓ Unitful 2014.0 ms ✓ SentinelArrays 1099.5 ms ✓ LoggingExtras 1469.6 ms ✓ StructUtils 1296.3 ms ✓ Compat 1353.5 ms ✓ Preferences 1794.0 ms ✓ CommonSubexpressions 828.1 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 1011.7 ms ✓ ChunkCodecLibZlib 1216.9 ms ✓ ChunkCodecLibZstd 1421.4 ms ✓ Statistics → SparseArraysExt 1480.8 ms ✓ Distances 856.1 ms ✓ DiffResults 959.1 ms ✓ AliasTables 1857.6 ms ✓ ThreadingUtilities 985.1 ms ✓ Missings 1087.4 ms ✓ PooledArrays 3263.2 ms ✓ Jieko 922.9 ms ✓ InverseFunctions → InverseFunctionsDatesExt 1670.6 ms ✓ InverseFunctions → InverseFunctionsTestExt 836.7 ms ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 4129.9 ms ✓ AbstractFFTs → AbstractFFTsTestExt 1529.4 ms ✓ FillArrays → FillArraysSparseArraysExt 949.4 ms ✓ FillArrays → FillArraysStatisticsExt 3116.5 ms ✓ TimerOutputs 905.5 ms ✓ RuntimeGeneratedFunctions 1160.5 ms ✓ Primes 3476.1 ms ✓ DataStructures 767.2 ms ✓ FunctionWrappersWrappers 847.0 ms ✓ ScopedValues 767.9 ms ✓ ADTypes → ADTypesConstructionBaseExt 1833.4 ms ✓ DifferentiationInterface 762.2 ms ✓ ADTypes → ADTypesEnzymeCoreExt 1330.4 ms ✓ LogExpFunctions 781.8 ms ✓ TableTraits 838.9 ms ✓ Ratios 995.8 ms ✓ Adapt 8531.0 ms ✓ FileIO 1479.1 ms ✓ FillArrays → FillArraysPDMatsExt 1451.7 ms ✓ AxisAlgorithms 1687.3 ms ✓ Unitful → ConstructionBaseUnitfulExt 2017.8 ms ✓ Unitful → PrintfExt 1804.1 ms ✓ Unitful → InverseFunctionsUnitfulExt 1701.9 ms ✓ Unitful → NaNMathExt 848.2 ms ✓ Compat → CompatLinearAlgebraExt 977.8 ms ✓ PrecompileTools 1332.5 ms ✓ JLLWrappers 1549.2 ms ✓ TruncatedStacktraces 1430.1 ms ✓ SciMLLogging 2934.4 ms ✓ Setfield 1345.2 ms ✓ Distances → DistancesSparseArraysExt 17630.5 ms ✓ Moshi 5200.6 ms ✓ Accessors 2435.2 ms ✓ FFTA 1055.0 ms ✓ SortingAlgorithms 2259.8 ms ✓ QuadGK 1333.3 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseArraysExt 814.5 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 1702.1 ms ✓ Tables 1249.0 ms ✓ ArrayInterface 1226.4 ms ✓ Adapt → AdaptSparseArraysExt 1223.5 ms ✓ GPUArraysCore 795.2 ms ✓ EnzymeCore → AdaptExt 835.5 ms ✓ OffsetArrays → OffsetArraysAdaptExt 9194.5 ms ✓ UnitfulAtomic 6112.5 ms ✓ PeriodicTable 2752.7 ms ✓ ChainRulesCore 6747.2 ms ✓ Aqua 3367.6 ms ✓ StringManipulation 14351.3 ms ✓ StaticArrays 2971.9 ms ✓ RecipesBase 16866.5 ms ✓ Parsers 6741.5 ms ✓ Static 11429.9 ms ✓ SparseMatrixColorings 43880.8 ms ✓ JLD2 1362.9 ms ✓ Chemfiles_jll 1462.7 ms ✓ Rmath_jll 1412.4 ms ✓ OpenSpecFun_jll 4440.9 ms ✓ IntelOpenMP_jll 4803.7 ms ✓ oneTBB_jll 1536.6 ms ✓ FFTW_jll 1759.7 ms ✓ Accessors → TestExt 2610.5 ms ✓ Accessors → LinearAlgebraExt 2284.1 ms ✓ Accessors → UnitfulExt 4767.3 ms ✓ StatsBase 866.0 ms ✓ StructUtils → StructUtilsTablesExt 794.6 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 2194.1 ms ✓ MaybeInplace 1305.9 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 1333.4 ms ✓ SciMLStructures 2270.9 ms ✓ PreallocationTools 805.5 ms ✓ DifferentiationInterface → DifferentiationInterfaceGPUArraysCoreExt 831.7 ms ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt 1292.6 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 1349.3 ms ✓ EnzymeCore → EnzymeCoreChainRulesCoreExt 909.2 ms ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 813.2 ms ✓ ADTypes → ADTypesChainRulesCoreExt 861.2 ms ✓ Distances → DistancesChainRulesCoreExt 900.9 ms ✓ DifferentiationInterface → DifferentiationInterfaceChainRulesCoreExt 3277.2 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 848.7 ms ✓ ArrayInterface → ArrayInterfaceChainRulesCoreExt 38546.9 ms ✓ PrettyTables 1519.6 ms ✓ StaticArrays → StaticArraysStatisticsExt 1616.4 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1548.1 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1673.0 ms ✓ FillArrays → FillArraysStaticArraysExt 1534.0 ms ✓ DifferentiationInterface → DifferentiationInterfaceStaticArraysExt 1441.8 ms ✓ Adapt → AdaptStaticArraysExt 1597.3 ms ✓ Accessors → StaticArraysExt 6794.5 ms ✓ AtomsBase 7475.8 ms ✓ JSON 1031.5 ms ✓ InlineStrings → ParsersExt 1061.9 ms ✓ BitTwiddlingConvenienceFunctions 2775.0 ms ✓ CPUSummary 5352.2 ms ✓ StaticArrayInterface 1897.2 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseMatrixColoringsExt 1650.6 ms ✓ Rmath 5125.3 ms ✓ SpecialFunctions  Downloading artifact: IntelOpenMP  Downloading artifact: oneTBB 10385.6 ms ✓ MKL_jll 4952.1 ms ✓ SciMLOperators 1614.9 ms ✓ PDMats → StatsBaseExt 1428.7 ms ✓ FiniteDiff 3887.8 ms ✓ SymbolicIndexingInterface 1414.3 ms ✓ MaybeInplace → MaybeInplaceSparseArraysExt 43521.4 ms ✓ ExponentialUtilities 86753.7 ms ✓ DataFrames 8458.1 ms ✓ NearestNeighbors 4416.2 ms ✓ Interpolations 6779.6 ms ✓ Chemfiles 1912.5 ms ✓ Conda 1799.8 ms ✓ PolyesterWeave 1510.4 ms ✓ StaticArrayInterface → StaticArrayInterfaceOffsetArraysExt 1663.4 ms ✓ StaticArrayInterface → StaticArrayInterfaceStaticArraysExt 1123.8 ms ✓ CloseOpenIntervals 1345.1 ms ✓ LayoutPointers 4423.9 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 5230.4 ms ✓ FastGaussQuadrature 2296.3 ms ✓ HypergeometricFunctions 1324.1 ms ✓ DiffRules 7219.7 ms ✓ FFTW 1405.4 ms ✓ SciMLOperators → SciMLOperatorsStaticArraysCoreExt 1593.5 ms ✓ SciMLOperators → SciMLOperatorsSparseArraysExt 1538.5 ms ✓ FiniteDiff → FiniteDiffStaticArraysExt 1303.5 ms ✓ FiniteDiff → FiniteDiffSparseArraysExt 1006.2 ms ✓ DifferentiationInterface → DifferentiationInterfaceFiniteDiffExt 3659.6 ms ✓ SymbolicIndexingInterface → SymbolicIndexingInterfacePrettyTablesExt 8215.5 ms ✓ RecursiveArrayTools 6757.8 ms ✓ ExponentialUtilities → ExponentialUtilitiesStaticArraysExt 4168.5 ms ✓ Clustering 3927.4 ms ✓ Interpolations → InterpolationsUnitfulExt 19055.1 ms ✓ PyCall 2068.2 ms ✓ StrideArraysCore 3001.1 ms ✓ StatsFuns 5741.8 ms ✓ ForwardDiff 1794.4 ms ✓ RecursiveArrayTools → RecursiveArrayToolsSparseArraysExt 1325.7 ms ✓ RecursiveArrayTools → RecursiveArrayToolsTablesExt 1346.7 ms ✓ RecursiveArrayTools → RecursiveArrayToolsStatisticsExt 2013.3 ms ✓ Polyester 3950.5 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 1049.9 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 9819.2 ms ✓ Distributions 1753.4 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 1150.3 ms ✓ FastPower → FastPowerForwardDiffExt 2458.2 ms ✓ Unitful → ForwardDiffExt 1413.5 ms ✓ DifferentiationInterface → DifferentiationInterfaceForwardDiffExt 2411.3 ms ✓ PreallocationTools → PreallocationToolsForwardDiffExt 2740.4 ms ✓ Interpolations → InterpolationsForwardDiffExt 1452.1 ms ✓ RecursiveArrayTools → RecursiveArrayToolsForwardDiffExt 32081.3 ms ✓ SciMLBase 1999.8 ms ✓ FastBroadcast 3438.0 ms ✓ Distributions → DistributionsTestExt 3158.2 ms ✓ Distributions → DistributionsChainRulesCoreExt 1925.6 ms ✓ NLSolversBase 3915.0 ms ✓ SciMLBase → SciMLBaseChainRulesCoreExt 6286.6 ms ✓ SciMLBase → SciMLBasePyCallExt 3984.4 ms ✓ SciMLBase → SciMLBaseForwardDiffExt 3141.9 ms ✓ SciMLBase → SciMLBaseDifferentiationInterfaceExt 4402.0 ms ✓ SciMLBase → SciMLBaseDistributionsExt 2013.0 ms ✓ RecursiveArrayTools → RecursiveArrayToolsFastBroadcastExt 3578.9 ms ✓ KernelDensity 2299.9 ms ✓ LineSearches 18771.9 ms ✓ LinearSolve 7779.2 ms ✓ SciMLJacobianOperators 5662.0 ms ✓ Optim 7987.8 ms ✓ LinearSolve → LinearSolveSparseArraysExt 6997.8 ms ✓ LinearSolve → LinearSolveForwardDiffExt 12321.5 ms ✓ LineSearch 19416.3 ms ✓ NonlinearSolveBase 4731.2 ms ✓ LinearSolve → LinearSolveEnzymeExt 4109.5 ms ✓ LineSearch → LineSearchLineSearchesExt 4128.4 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseMatrixColoringsExt 4358.5 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseArraysExt 3414.2 ms ✓ NonlinearSolveBase → NonlinearSolveBaseChainRulesCoreExt 4475.8 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLinearSolveExt 3416.3 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLineSearchExt 4228.7 ms ✓ NonlinearSolveBase → NonlinearSolveBaseForwardDiffExt 8595.4 ms ✓ BracketingNonlinearSolve 27620.6 ms ✓ NonlinearSolveQuasiNewton 18799.3 ms ✓ NonlinearSolveSpectralMethods 52911.0 ms ✓ NonlinearSolveFirstOrder 3937.9 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveForwardDiffExt 7523.1 ms ✓ DiffEqBase 5510.9 ms ✓ NonlinearSolveQuasiNewton → NonlinearSolveQuasiNewtonForwardDiffExt 4270.8 ms ✓ NonlinearSolveSpectralMethods → NonlinearSolveSpectralMethodsForwardDiffExt 3404.6 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveChainRulesCoreExt 19928.9 ms ✓ SimpleNonlinearSolve 4473.4 ms ✓ DiffEqBase → DiffEqBaseSparseArraysExt 5517.1 ms ✓ DiffEqBase → DiffEqBaseUnitfulExt 3663.4 ms ✓ DiffEqBase → DiffEqBaseChainRulesCoreExt 4230.9 ms ✓ DiffEqBase → DiffEqBaseForwardDiffExt 12247.6 ms ✓ OrdinaryDiffEqCore 4102.1 ms ✓ SimpleNonlinearSolve → SimpleNonlinearSolveChainRulesCoreExt 4842.3 ms ✓ OrdinaryDiffEqCore → OrdinaryDiffEqCoreSparseArraysExt 7439.8 ms ✓ OrdinaryDiffEqStabilizedRK 5345.4 ms ✓ OrdinaryDiffEqFunctionMap 61844.5 ms ✓ OrdinaryDiffEqVerner 6478.4 ms ✓ OrdinaryDiffEqQPRK 6852.0 ms ✓ OrdinaryDiffEqSymplecticRK 9913.2 ms ✓ OrdinaryDiffEqLowOrderRK 7122.2 ms ✓ OrdinaryDiffEqFeagin 8790.3 ms ✓ OrdinaryDiffEqSSPRK 7565.4 ms ✓ OrdinaryDiffEqRKN 7631.2 ms ✓ OrdinaryDiffEqHighOrderRK 6826.4 ms ✓ OrdinaryDiffEqExplicitRK 14921.1 ms ✓ OrdinaryDiffEqTsit5 7210.2 ms ✓ OrdinaryDiffEqPRK 9921.1 ms ✓ OrdinaryDiffEqLowStorageRK 39994.9 ms ✓ NonlinearSolve 10497.7 ms ✓ OrdinaryDiffEqLinear 12452.4 ms ✓ OrdinaryDiffEqDifferentiation 6948.5 ms ✓ OrdinaryDiffEqAdamsBashforthMoulton 6091.5 ms ✓ OrdinaryDiffEqNordsieck 6001.2 ms ✓ OrdinaryDiffEqDifferentiation → OrdinaryDiffEqDifferentiationSparseArraysExt 12754.1 ms ✓ OrdinaryDiffEqExtrapolation 45579.9 ms ✓ OrdinaryDiffEqRosenbrock 15137.6 ms ✓ OrdinaryDiffEqExponentialRK 14924.9 ms ✓ OrdinaryDiffEqNonlinearSolve 13422.7 ms ✓ OrdinaryDiffEqIMEXMultistep 12886.6 ms ✓ OrdinaryDiffEqStabilizedIRK 14563.8 ms ✓ OrdinaryDiffEqPDIRK 16403.3 ms ✓ OrdinaryDiffEqSDIRK 56486.4 ms ✓ OrdinaryDiffEqFIRK 31309.5 ms ✓ OrdinaryDiffEqBDF 69160.2 ms ✓ OrdinaryDiffEqDefault 25599.7 ms ✓ OrdinaryDiffEq ┌ Warning: MBX is not properly installed. │ MBX pot not available! └ @ YetAnotherSimulationSuite ~/.julia/packages/YetAnotherSimulationSuite/Xapcb/src/lib/MBX/libmbx.jl:9 69192.1 ms ✓ YetAnotherSimulationSuite 297 dependencies successfully precompiled in 1810 seconds. 41 already precompiled. 2 dependencies had output during precompilation: ┌ YetAnotherSimulationSuite │ ┌ Warning: MBX is not properly installed. │ │ MBX pot not available! │ └ @ YetAnotherSimulationSuite ~/.julia/packages/YetAnotherSimulationSuite/Xapcb/src/lib/MBX/libmbx.jl:9 └ ┌ MKL_jll │ Downloading artifact: IntelOpenMP │ Downloading artifact: oneTBB └ Precompilation completed after 1828.67s ################################################################################ # Testing # Testing YetAnotherSimulationSuite Status `/tmp/jl_lVA4T1/Project.toml` [4c88cf16] Aqua v0.8.14 ⌅ [429524aa] Optim v1.13.3 [d3ec4d54] YetAnotherSimulationSuite v0.1.2 [37e2e46d] LinearAlgebra v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_lVA4T1/Manifest.toml` [47edcb42] ADTypes v1.21.0 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.43 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [4c88cf16] Aqua v0.8.14 [4fba245c] ArrayInterface v7.22.0 [a963bdd2] AtomsBase v0.5.2 [13072b0f] AxisAlgorithms v1.1.0 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] BracketingNonlinearSolve v1.11.0 [2a0fbf3d] CPUSummary v0.2.7 [d360d2e6] ChainRulesCore v1.26.0 [46823bd8] Chemfiles v0.10.43 [0b6fb165] ChunkCodecCore v1.0.1 [4c0bbee4] ChunkCodecLibZlib v1.0.0 [55437552] ChunkCodecLibZstd v1.0.0 [fb6a15b2] CloseOpenIntervals v0.1.13 [aaaa29a8] Clustering v0.15.8 [38540f10] CommonSolve v0.2.6 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [8f4d0f93] Conda v1.10.3 [187b0558] ConstructionBase v1.6.0 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [2b5f629d] DiffEqBase v6.210.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.16 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.123 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.7 [f151be2c] EnzymeCore v0.8.18 [d4d017d3] ExponentialUtilities v1.30.0 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [b86e33f2] FFTA v0.3.1 [7a1cc6ca] FFTW v1.10.0 [7034ab61] FastBroadcast v0.3.5 [9aa1b823] FastClosures v0.3.2 [442a2c76] FastGaussQuadrature v1.1.0 [a4df4552] FastPower v1.3.1 [5789e2e9] FileIO v1.18.0 [1a297f60] FillArrays v1.16.0 [6a86dc24] FiniteDiff v2.29.0 [f6369f11] ForwardDiff v1.3.2 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 [46192b85] GPUArraysCore v0.2.0 [c145ed77] GenericSchur v0.5.6 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [615f187c] IfElse v0.1.1 [842dd82b] InlineStrings v1.4.5 [18e54dd8] IntegerMathUtils v0.1.3 [a98d9a8b] Interpolations v0.16.2 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.6.3 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.4.0 [ae98c720] Jieko v0.2.1 [5ab0869b] KernelDensity v0.6.11 [ba0b0d4f] Krylov v0.10.5 [b964fa9f] LaTeXStrings v1.4.0 [10f19ff3] LayoutPointers v0.1.17 [87fe0de2] LineSearch v0.1.6 ⌃ [d3d80556] LineSearches v7.5.1 [7ed4a6bd] LinearSolve v3.62.0 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [bb5d69b7] MaybeInplace v0.1.4 [e1d29d7a] Missings v1.2.0 [2e0e35c7] Moshi v0.3.7 [46d2c3a1] MuladdMacro v0.2.4 ⌅ [d41bc354] NLSolversBase v7.10.0 [77ba4419] NaNMath v1.1.3 [b8a86587] NearestNeighbors v0.4.27 [8913a72c] NonlinearSolve v4.16.0 [be0214bd] NonlinearSolveBase v2.15.0 [5959db7a] NonlinearSolveFirstOrder v2.0.0 [9a2c21bd] NonlinearSolveQuasiNewton v1.12.0 [26075421] NonlinearSolveSpectralMethods v1.6.0 [6fe1bfb0] OffsetArrays v1.17.0 ⌅ [429524aa] Optim v1.13.3 [bac558e1] OrderedCollections v1.8.1 [1dea7af3] OrdinaryDiffEq v6.108.0 [89bda076] OrdinaryDiffEqAdamsBashforthMoulton v1.9.0 [6ad6398a] OrdinaryDiffEqBDF v1.22.0 [bbf590c4] OrdinaryDiffEqCore v3.12.0 [50262376] OrdinaryDiffEqDefault v1.13.0 [4302a76b] OrdinaryDiffEqDifferentiation v2.2.0 [9286f039] OrdinaryDiffEqExplicitRK v1.9.0 [e0540318] OrdinaryDiffEqExponentialRK v1.13.0 [becaefa8] OrdinaryDiffEqExtrapolation v1.16.0 [5960d6e9] OrdinaryDiffEqFIRK v1.23.0 [101fe9f7] OrdinaryDiffEqFeagin v1.8.0 [d3585ca7] OrdinaryDiffEqFunctionMap v1.9.0 [d28bc4f8] OrdinaryDiffEqHighOrderRK v1.9.0 [9f002381] OrdinaryDiffEqIMEXMultistep v1.12.0 [521117fe] OrdinaryDiffEqLinear v1.10.0 [1344f307] OrdinaryDiffEqLowOrderRK v1.10.0 [b0944070] OrdinaryDiffEqLowStorageRK v1.12.0 [127b3ac7] OrdinaryDiffEqNonlinearSolve v1.23.0 [c9986a66] OrdinaryDiffEqNordsieck v1.9.0 [5dd0a6cf] OrdinaryDiffEqPDIRK v1.11.0 [5b33eab2] OrdinaryDiffEqPRK v1.8.0 [04162be5] OrdinaryDiffEqQPRK v1.8.0 [af6ede74] OrdinaryDiffEqRKN v1.10.0 [43230ef6] OrdinaryDiffEqRosenbrock v1.25.0 [2d112036] OrdinaryDiffEqSDIRK v1.12.0 [669c94d9] OrdinaryDiffEqSSPRK v1.11.0 [e3e12d00] OrdinaryDiffEqStabilizedIRK v1.11.0 [358294b1] OrdinaryDiffEqStabilizedRK v1.8.0 [fa646aed] OrdinaryDiffEqSymplecticRK v1.11.0 [b1df2697] OrdinaryDiffEqTsit5 v1.9.0 [79d7bb75] OrdinaryDiffEqVerner v1.11.0 [90014a1f] PDMats v0.11.37 [69de0a69] Parsers v2.8.3 [7b2266bf] PeriodicTable v1.2.1 [f517fe37] Polyester v0.7.19 [1d0040c9] PolyesterWeave v0.2.2 [2dfb63ee] PooledArrays v1.4.3 [85a6dd25] PositiveFactorizations v0.2.4 [d236fae5] PreallocationTools v1.1.2 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.2 [08abe8d2] PrettyTables v3.2.3 [27ebfcd6] Primes v0.5.7 [43287f4e] PtrArrays v1.4.0 [438e738f] PyCall v1.96.4 [1fd47b50] QuadGK v2.11.2 [c84ed2f1] Ratios v0.4.5 [3cdcf5f2] RecipesBase v1.3.4 [731186ca] RecursiveArrayTools v3.48.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [7e49a35a] RuntimeGeneratedFunctions v0.5.17 [94e857df] SIMDTypes v0.1.0 [0bca4576] SciMLBase v2.148.0 [19f34311] SciMLJacobianOperators v0.1.12 [a6db7da4] SciMLLogging v1.9.1 [c0aeaf25] SciMLOperators v1.15.1 [431bcebd] SciMLPublic v1.0.1 [53ae85a6] SciMLStructures v1.10.0 [7e506255] ScopedValues v1.5.0 [91c51154] SentinelArrays v1.4.9 [efcf1570] Setfield v1.1.2 [727e6d20] SimpleNonlinearSolve v2.11.0 [a2af1166] SortingAlgorithms v1.2.2 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[4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.18.0+0 [e37daf67] LibGit2_jll v1.9.2+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.30+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.5+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Test Summary: | Pass Total Time Aqua.jl | 11 11 5m20.0s ┌ Warning: Extended XYZ: expected whitespace after the value for occupancy, got 0 └ @ Chemfiles ~/.julia/packages/Chemfiles/50h9K/src/misc.jl:29 Test Summary: | Pass Total Time IO | 40 40 28.8s Test Summary: | Pass Total Time Helpers | 7 7 2.8s Test Summary: | Pass Total Time Bodies | 5 5 2.2s Test Summary: | Pass Total Time Cells | 17 17 16.1s ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1294 running 1 of 1 signal (10): User defined signal 1 _ZNK4llvm5Value12getValueNameEv at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1246 wait_forever at ./task.jl:1168 jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4342 jl_apply at /source/src/julia.h:2295 [inlined] start_task at /source/src/task.c:1275 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007cf1d8cdb1c0 Total snapshots: 483. Utilization: 0% ╎483 @Base/task.jl:1168 wait_forever() 482╎ 483 @Base/task.jl:1246 wait() [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1246 wait_forever at ./task.jl:1168 jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4342 jl_apply at /source/src/julia.h:2295 [inlined] start_task at /source/src/task.c:1275 unknown function (ip: (nil)) at (unknown file) Allocations: 30978938 (Pool: 30977852; Big: 1086); GC: 32 [1294] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/YetAnotherSimulationSuite/Xapcb/test/potentials/hgnn_test.jl:2 _ZN4llvm13LiveVariables17HandlePhysRegKillENS_8RegisterEPNS_12MachineInstrE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm13LiveVariables16HandlePhysRegDefENS_8RegisterEPNS_12MachineInstrERNS_15SmallVectorImplIS1_EE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm13LiveVariables10runOnBlockEPNS_17MachineBasicBlockEj at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm13LiveVariables7analyzeERNS_15MachineFunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm24LiveVariablesWrapperPass20runOnMachineFunctionERNS_15MachineFunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm19MachineFunctionPass13runOnFunctionERNS_8FunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm13FPPassManager13runOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm13FPPassManager11runOnModuleERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm6legacy15PassManagerImpl3runERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) operator() at /source/src/jitlayers.cpp:1380 compileModule at /source/src/jitlayers.cpp:2299 materialize at /source/src/jitlayers.cpp:884 _ZN4llvm3orc19MaterializationTask3runEv at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) process_tasks at /source/src/julia-task-dispatcher.h:370 [inlined] work_until at /source/src/julia-task-dispatcher.h:352 wait at /source/src/julia-task-dispatcher.h:84 [inlined] get at /source/src/julia-task-dispatcher.h:171 [inlined] publishCIs at /source/src/jitlayers.cpp:2027 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:487 jl_compile_method_internal at /source/src/gf.c:3655 _jl_invoke at /source/src/gf.c:4108 [inlined] ijl_apply_generic at /source/src/gf.c:4342 jl_apply at /source/src/julia.h:2295 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_body at /source/src/interpreter.c:581 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:766 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:780 ijl_toplevel_eval_in at /source/src/toplevel.c:825 eval at ./boot.jl:517 include_string at ./loading.jl:3130 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4342 _include at ./loading.jl:3190 include at ./Base.jl:324 IncludeInto at ./Base.jl:325 unknown function (ip: 0x7f968350fc12) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4342 jl_apply at /source/src/julia.h:2295 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:766 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:780 ijl_toplevel_eval_in at /source/src/toplevel.c:825 eval at ./boot.jl:517 include_string at ./loading.jl:3130 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4342 _include at ./loading.jl:3190 include at ./Base.jl:324 IncludeInto at ./Base.jl:325 jfptr_IncludeInto_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4342 jl_apply at /source/src/julia.h:2295 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:766 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:780 ijl_toplevel_eval_in at /source/src/toplevel.c:825 eval at ./boot.jl:517 exec_options at ./client.jl:310 _start at ./client.jl:585 jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4342 jl_apply at /source/src/julia.h:2295 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7f96e58f8249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 167634976 (Pool: 167632395; Big: 2581); GC: 52 PkgEval terminated after 2726.7s: test duration exceeded the time limit