Package evaluation to test MRIFiles on Julia 1.14.0-DEV.1826 (44c835795b*) started at 2026-03-02T18:13:06.173 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 15.27s ################################################################################ # Installation # Installing MRIFiles... Resolving package versions... Installed libaec_jll ─────────── v1.1.5+0 Installed MKL_jll ────────────── v2025.2.0+0 Installed MPICH_jll ──────────── v4.3.2+0 Installed LightXML ───────────── v0.9.3 Installed MicrosoftMPI_jll ───── v10.1.4+3 Installed oneTBB_jll ─────────── v2022.0.0+1 Installed HashArrayMappedTries ─ v0.2.0 Installed NFFTTools ──────────── v0.2.7 Installed IntelOpenMP_jll ────── v2025.2.0+0 Installed Compat ─────────────── v4.18.1 Installed AbstractFFTs ───────── v1.5.0 Installed FileIO ─────────────── v1.18.0 Installed MRIFiles ───────────── v0.3.2 Installed Requires ───────────── v1.3.1 Installed Reexport ───────────── v1.2.2 Installed HDF5_jll ───────────── v1.14.6+0 Installed Hwloc_jll ──────────── v2.12.1+0 Installed OpenMPI_jll ────────── v5.0.10+0 Installed ScopedValues ───────── v1.5.0 Installed XML2_jll ───────────── v2.15.1+0 Installed Preferences ────────── v1.5.2 Installed FFTW_jll ───────────── v3.3.11+0 Installed JLLWrappers ────────── v1.7.1 Installed FFTW ───────────────── v1.10.0 Installed Libiconv_jll ───────── v1.18.0+0 Installed MPIPreferences ─────── v0.1.11 Installed MPItrampoline_jll ──── v5.5.5+0 Installed MRIBase ────────────── v0.4.6 Installed HDF5 ───────────────── v0.17.2 Installed AbstractNFFTs ──────── v0.9.1 Installing 7 artifacts Installed artifact libaec 49.6 KiB Installed artifact Libiconv 1.9 MiB Installed artifact FFTW 2.2 MiB Installed artifact XML2 2.2 MiB Installed artifact MPICH 3.3 MiB Installed artifact Hwloc 3.5 MiB Installed artifact HDF5 5.7 MiB Updating `~/.julia/environments/v1.14/Project.toml` [5a6f062f] + MRIFiles v0.3.2 Updating `~/.julia/environments/v1.14/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [7f219486] + AbstractNFFTs v0.9.1 [34da2185] + Compat v4.18.1 [7a1cc6ca] + FFTW v1.10.0 [5789e2e9] + FileIO v1.18.0 [f67ccb44] + HDF5 v0.17.2 [076d061b] + HashArrayMappedTries v0.2.0 [692b3bcd] + JLLWrappers v1.7.1 [9c8b4983] + LightXML v0.9.3 [3da0fdf6] + MPIPreferences v0.1.11 [f7771a9a] + MRIBase v0.4.6 [5a6f062f] + MRIFiles v0.3.2 ⌅ [7424e34d] + NFFTTools v0.2.7 [21216c6a] + Preferences v1.5.2 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [7e506255] + ScopedValues v1.5.0 [f5851436] + FFTW_jll v3.3.11+0 ⌅ [0234f1f7] + HDF5_jll v1.14.6+0 ⌃ [e33a78d0] + Hwloc_jll v2.12.1+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] + MKL_jll v2025.2.0+0 ⌅ [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.5+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.10+0 [02c8fc9c] + XML2_jll v2.15.1+0 [477f73a3] + libaec_jll v1.1.5+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.18.0+0 [e37daf67] + LibGit2_jll v1.9.2+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.12.2 [4536629a] + OpenBLAS_jll v0.3.30+0 [458c3c95] + OpenSSL_jll v3.5.5+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 15.51s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4960.2 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. Precompiling package dependencies... Precompiling packages... 4500.8 ms ✓ MacroTools 813.3 ms ✓ Reexport 1018.4 ms ✓ MappedArrays 918.2 ms ✓ TensorCore 1191.9 ms ✓ ConstructionBase 2265.8 ms ✓ IrrationalConstants 915.5 ms ✓ StatsAPI 1234.4 ms ✓ IterTools 1097.9 ms ✓ IntervalSets 866.9 ms ✓ CEnum 1070.8 ms ✓ Inflate 794.1 ms ✓ CommonSolve 995.2 ms ✓ ChunkCodecCore 1116.9 ms ✓ StableTasks 1157.8 ms ✓ Statistics 1023.0 ms ✓ StaticArraysCore 949.7 ms ✓ ChunkSplitters 803.7 ms ✓ IfElse 840.6 ms ✓ PtrArrays 817.0 ms ✓ TaskLocalValues 989.9 ms ✓ ManualMemory 892.1 ms ✓ DataAPI 895.0 ms ✓ SciMLPublic 831.4 ms ✓ RealDot 813.4 ms ✓ CommonWorldInvalidations 818.0 ms ✓ CustomUnitRanges 1062.9 ms ✓ LazyModules 1019.9 ms ✓ InverseFunctions 879.8 ms ✓ CompositionsBase 926.0 ms ✓ ShiftedArrays 1174.5 ms ✓ AbstractTrees 1663.5 ms ✓ InitialValues 1159.4 ms ✓ AbstractFFTs 1081.0 ms ✓ ComputationalResources 942.8 ms ✓ ExprTools 887.4 ms ✓ IndirectArrays 821.3 ms ✓ UnPack 2657.5 ms ✓ Bessels 875.0 ms ✓ RangeArrays 1299.8 ms ✓ OrderedCollections 981.8 ms ✓ HashArrayMappedTries 1150.4 ms ✓ DocStringExtensions 834.4 ms ✓ FastClosures 1741.7 ms ✓ OffsetArrays 789.8 ms ✓ SIMDTypes 1080.1 ms ✓ NaNMath 1283.5 ms ✓ Requires 1829.8 ms ✓ CpuId 1459.1 ms ✓ WoodburyMatrices 929.9 ms ✓ Scratch 35555.1 ms ✓ Unitful 1911.4 ms ✓ ProgressMeter 1241.7 ms ✓ Compat 1201.7 ms ✓ Preferences 2410.0 ms ✓ TranscodingStreams 4706.7 ms ✓ PkgVersion 883.8 ms ✓ Memoize 3533.6 ms ✓ SimpleTraits 825.4 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 785.7 ms ✓ IntervalSets → IntervalSetsRandomExt 805.8 ms ✓ ConstructionBase → ConstructionBaseIntervalSetsExt 1046.0 ms ✓ ChunkCodecLibZlib 1166.6 ms ✓ ChunkCodecLibZstd 1288.7 ms ✓ Statistics → SparseArraysExt 3955.3 ms ✓ FixedPointNumbers 1628.3 ms ✓ Distances 824.5 ms ✓ IntervalSets → IntervalSetsStatisticsExt 980.6 ms ✓ AliasTables 1837.9 ms ✓ ThreadingUtilities 998.9 ms ✓ Missings 1119.9 ms ✓ Quaternions 922.4 ms ✓ InverseFunctions → InverseFunctionsDatesExt 1675.2 ms ✓ InverseFunctions → InverseFunctionsTestExt 825.1 ms ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 4248.9 ms ✓ AbstractFFTs → AbstractFFTsTestExt 3459.9 ms ✓ TimerOutputs 981.5 ms ✓ Parameters 3852.8 ms ✓ DataStructures 921.3 ms ✓ ScopedValues 1435.7 ms ✓ LogExpFunctions 958.0 ms ✓ PaddedViews 910.1 ms ✓ StackViews 899.1 ms ✓ CatIndices 852.5 ms ✓ Ratios 973.6 ms ✓ Adapt 9522.3 ms ✓ FileIO 1456.4 ms ✓ AxisAlgorithms 1992.2 ms ✓ Unitful → ConstructionBaseUnitfulExt 2242.4 ms ✓ Unitful → PrintfExt 2122.9 ms ✓ Unitful → InverseFunctionsUnitfulExt 2073.6 ms ✓ Unitful → NaNMathExt 868.9 ms ✓ Compat → CompatLinearAlgebraExt 925.2 ms ✓ PrecompileTools 1277.1 ms ✓ JLLWrappers 1498.6 ms ✓ MPIPreferences 1719.6 ms ✓ CodecZlib 3521.3 ms ✓ BasicInterpolators 3042.4 ms ✓ Setfield 1568.5 ms ✓ AxisArrays 4746.1 ms ✓ ColorTypes 1282.1 ms ✓ Distances → DistancesSparseArraysExt 1389.8 ms ✓ StringDistances 5196.1 ms ✓ Accessors 4014.6 ms ✓ LinearOperators 1131.6 ms ✓ SortingAlgorithms 1652.9 ms ✓ AbstractNFFTs 855.9 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 1050.0 ms ✓ MosaicViews 934.7 ms ✓ Ratios → RatiosFixedPointNumbersExt 1230.8 ms ✓ ArrayInterface 1310.6 ms ✓ Adapt → AdaptSparseArraysExt 958.8 ms ✓ TSVD 871.8 ms ✓ OffsetArrays → OffsetArraysAdaptExt 2878.0 ms ✓ ChainRulesCore 14800.0 ms ✓ SIMD 14832.6 ms ✓ StaticArrays 3062.9 ms ✓ RecipesBase 7433.8 ms ✓ Static 49260.1 ms ✓ JLD2 1489.5 ms ✓ Bzip2_jll 1597.3 ms ✓ XZ_jll 1504.7 ms ✓ Hwloc_jll 1292.7 ms ✓ MicrosoftMPI_jll 1491.0 ms ✓ OpenSpecFun_jll 1285.6 ms ✓ Xorg_xtrans_jll 5172.7 ms ✓ IntelOpenMP_jll 1520.2 ms ✓ libpng_jll 5203.2 ms ✓ oneTBB_jll 1465.8 ms ✓ Imath_jll 1604.0 ms ✓ LERC_jll 1547.9 ms ✓ Xorg_libXau_jll 1566.8 ms ✓ FFTW_jll 1553.1 ms ✓ libaec_jll 1603.7 ms ✓ Libiconv_jll 1571.0 ms ✓ Xorg_libXdmcp_jll 1577.8 ms ✓ Giflib_jll 1593.3 ms ✓ JpegTurbo_jll 4946.2 ms ✓ MPItrampoline_jll 2303.0 ms ✓ NIfTI 36055.7 ms ✓ Polynomials 1160.8 ms ✓ IntegralArrays 7076.8 ms ✓ Colors 4072.4 ms ✓ ColorVectorSpace 6122.4 ms ✓ QOI 1815.9 ms ✓ Accessors → TestExt 2657.8 ms ✓ Accessors → IntervalSetsExt 2590.6 ms ✓ Accessors → LinearAlgebraExt 2266.4 ms ✓ Accessors → UnitfulExt 4688.2 ms ✓ StatsBase 785.2 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 1274.4 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 1340.6 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 964.4 ms ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 916.8 ms ✓ Distances → DistancesChainRulesCoreExt 3398.6 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 1505.9 ms ✓ LinearOperators → LinearOperatorsChainRulesCoreExt 1039.8 ms ✓ AbstractNFFTs → AbstractNFFTsChainRulesCoreExt 884.4 ms ✓ ArrayInterface → ArrayInterfaceChainRulesCoreExt 50278.5 ms ✓ TiffImages 4223.4 ms ✓ ArnoldiMethod 3385.0 ms ✓ CoordinateTransformations 1607.7 ms ✓ StaticArrays → StaticArraysStatisticsExt 1473.5 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1473.5 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1612.9 ms ✓ RegionTrees 5451.5 ms ✓ Rotations 1463.7 ms ✓ Adapt → AdaptStaticArraysExt 1653.3 ms ✓ Accessors → StaticArraysExt 4157.2 ms ✓ IterativeSolvers 1410.7 ms ✓ IntervalSets → IntervalSetsRecipesBaseExt 1006.8 ms ✓ BitTwiddlingConvenienceFunctions 2668.9 ms ✓ CPUSummary 5478.1 ms ✓ StaticArrayInterface 6251.1 ms ✓ JLD2 → UnPackExt 1569.2 ms ✓ libzip_jll 5609.5 ms ✓ MPICH_jll 5006.2 ms ✓ OpenMPI_jll 5328.4 ms ✓ SpecialFunctions  Downloading artifact: IntelOpenMP  Downloading artifact: oneTBB 10719.2 ms ✓ MKL_jll 1543.0 ms ✓ OpenEXR_jll 1500.9 ms ✓ XML2_jll 1495.4 ms ✓ Xorg_libxcb_jll 1681.0 ms ✓ Ghostscript_jll 1590.4 ms ✓ Libtiff_jll 1545.7 ms ✓ libsixel_jll 3647.7 ms ✓ Polynomials → PolynomialsRecipesBaseExt 3097.7 ms ✓ Polynomials → PolynomialsChainRulesCoreExt 1418.8 ms ✓ Graphics 30576.0 ms ✓ ImageCore 9139.0 ms ✓ ColorSchemes 1787.4 ms ✓ BangBang 7240.3 ms ✓ Roots 8645.8 ms ✓ NearestNeighbors 10128.5 ms ✓ Graphs WARNING: method definition for checkbounds at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/Interpolations.jl:454 declares type variable N but does not use it. WARNING: method definition for checkbounds at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/Interpolations.jl:457 declares type variable N but does not use it. WARNING: method definition for GriddedInterpolation at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/gridded/gridded.jl:37 declares type variable pad but does not use it. WARNING: method definition for GriddedInterpolation at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/gridded/gridded.jl:60 declares type variable pad but does not use it. WARNING: method definition for interpolate! at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/deprecations.jl:30 declares type variable TWeights but does not use it. 4832.7 ms ✓ Interpolations 1962.9 ms ✓ Rotations → RotationsRecipesBaseExt 2190.8 ms ✓ HostCPUFeatures 1777.4 ms ✓ PolyesterWeave 1097.0 ms ✓ StaticArrayInterface → StaticArrayInterfaceOffsetArraysExt 1737.5 ms ✓ StaticArrayInterface → StaticArrayInterfaceStaticArraysExt 1188.4 ms ✓ CloseOpenIntervals 1423.8 ms ✓ LayoutPointers 6050.2 ms ✓ HDF5_jll 4312.1 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 1418.4 ms ✓ ColorVectorSpace → SpecialFunctionsExt 7202.0 ms ✓ FFTW 6079.0 ms ✓ OpenEXR 1162.2 ms ✓ LightXML 1590.9 ms ✓ Xorg_libX11_jll 1536.8 ms ✓ LittleCMS_jll 4340.1 ms ✓ ImageBase 7041.2 ms ✓ PNGFiles 12134.1 ms ✓ Sixel 9584.6 ms ✓ JpegTurbo 2421.5 ms ✓ OhMyThreads 1243.4 ms ✓ BangBang → BangBangChainRulesCoreExt 1776.8 ms ✓ BangBang → BangBangStaticArraysExt 1208.1 ms ✓ Roots → RootsChainRulesCoreExt 2713.9 ms ✓ Roots → RootsUnitfulExt 4539.0 ms ✓ Clustering 9644.6 ms ✓ MetaGraphs 3762.3 ms ✓ SimpleWeightedGraphs 3398.5 ms ✓ Graphs → GraphsSharedArraysExt 1278.9 ms ✓ TiledIteration 14749.6 ms ✓ VectorizationBase 16141.7 ms ✓ HDF5 1350.9 ms ✓ FFTViews 1390.7 ms ✓ NFFTTools 3769.1 ms ✓ Polynomials → PolynomialsFFTWExt 1587.7 ms ✓ Xorg_libXext_jll 1560.3 ms ✓ OpenJpeg_jll 3405.9 ms ✓ HistogramThresholding 6285.9 ms ✓ ImageAxes 6622.1 ms ✓ ImageTransformations 8794.3 ms ✓ ImageShow 1630.6 ms ✓ OhMyThreads → MarkdownExt 3580.9 ms ✓ SLEEFPirates 92610.6 ms ✓ ImageFiltering 2433.1 ms ✓ MRIBase 6370.3 ms ✓ DSP 1525.7 ms ✓ Libglvnd_jll 5854.0 ms ✓ ImageBinarization 3956.1 ms ✓ ImageMetadata 7488.8 ms ✓ ImageContrastAdjustment 5376.4 ms ✓ LinearOperatorCollection 19387.9 ms ✓ NFFT 40319.9 ms ✓ LoopVectorization 28707.1 ms ✓ ImageCorners 3160.9 ms ✓ MRICoilSensitivities 7536.9 ms ✓ MRIFiles 3902.5 ms ✓ DSP → OffsetArraysExt 5853.8 ms ✓ Wavelets 1738.6 ms ✓ libwebp_jll 8176.9 ms ✓ Netpbm 2942.4 ms ✓ LinearOperatorCollection → LinearOperatorFFTWExt 7118.9 ms ✓ RegularizedLeastSquares 3534.3 ms ✓ LoopVectorization → SpecialFunctionsExt 17664.7 ms ✓ ImageMorphology 5007.7 ms ✓ LinearOperatorCollection → LinearOperatorWaveletExt 9297.5 ms ✓ WebP 1733.4 ms ✓ ImageMagick_jll 3114.6 ms ✓ LinearOperatorCollection → LinearOperatorNFFTExt 6491.0 ms ✓ ImageDistances 18591.8 ms ✓ ImageSegmentation 8437.7 ms ✓ MRIOperators 5280.1 ms ✓ ImageIO 13181.0 ms ✓ ImageMagick 25680.5 ms ✓ ImageQualityIndexes 11221.6 ms ✓ MRIReco 8260.1 ms ✓ TestImages 25296.2 ms ✓ Images 31547.6 ms ✓ ImageUtils 272 dependencies successfully precompiled in 1263 seconds. 40 already precompiled. 2 dependencies had output during precompilation: ┌ MKL_jll │ Downloading artifact: IntelOpenMP │ Downloading artifact: oneTBB └ ┌ Interpolations │ WARNING: method definition for checkbounds at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/Interpolations.jl:454 declares type variable N but does not use it. │ WARNING: method definition for checkbounds at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/Interpolations.jl:457 declares type variable N but does not use it. │ WARNING: method definition for GriddedInterpolation at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/gridded/gridded.jl:37 declares type variable pad but does not use it. │ WARNING: method definition for GriddedInterpolation at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/gridded/gridded.jl:60 declares type variable pad but does not use it. │ WARNING: method definition for interpolate! at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/deprecations.jl:30 declares type variable TWeights but does not use it. └ Precompilation completed after 1313.96s ################################################################################ # Testing # Testing MRIFiles Status `/tmp/jl_ssIT1L/Project.toml` [5789e2e9] FileIO v1.18.0 [f67ccb44] HDF5 v0.17.2 [8ad4436d] ImageUtils v0.2.12 [9c8b4983] LightXML v0.9.3 [f7771a9a] MRIBase v0.4.6 [c57eb701] MRICoilSensitivities v0.1.4 [5a6f062f] MRIFiles v0.3.2 [bdf86e05] MRIReco v0.9.2 [189a3867] Reexport v1.2.2 [6c6a2e73] Scratch v1.3.0 [4af54fe1] LazyArtifacts v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [de0858da] Printf v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_ssIT1L/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [7f219486] AbstractNFFTs v0.9.1 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.43 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.22.0 ⌃ [13072b0f] AxisAlgorithms v1.0.1 [39de3d68] AxisArrays v0.4.8 [198e06fe] BangBang v0.4.8 [26cce99e] BasicInterpolators v0.7.1 [0e736298] Bessels v0.2.8 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [fa961155] CEnum v0.5.0 [2a0fbf3d] CPUSummary v0.2.7 [aafaddc9] CatIndices v0.2.2 [d360d2e6] ChainRulesCore v1.26.0 [0b6fb165] ChunkCodecCore v1.0.1 [4c0bbee4] ChunkCodecLibZlib v1.0.0 [55437552] ChunkCodecLibZstd v1.0.0 [ae650224] ChunkSplitters v3.2.0 [fb6a15b2] CloseOpenIntervals v0.1.13 [aaaa29a8] Clustering v0.15.8 [944b1d66] CodecZlib v0.7.8 [35d6a980] ColorSchemes v3.31.0 ⌅ [3da002f7] ColorTypes v0.11.5 ⌅ [c3611d14] ColorVectorSpace v0.10.0 ⌅ [5ae59095] Colors v0.12.11 [38540f10] CommonSolve v0.2.6 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [ed09eef8] ComputationalResources v0.3.2 [187b0558] ConstructionBase v1.6.0 [150eb455] CoordinateTransformations v0.6.4 [adafc99b] CpuId v0.3.1 [dc8bdbbb] CustomUnitRanges v1.0.2 [717857b8] DSP v0.8.4 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.3 [b4f34e82] Distances v0.10.12 [ffbed154] DocStringExtensions v0.9.5 [e2ba6199] ExprTools v0.1.10 [4f61f5a4] FFTViews v0.3.2 [7a1cc6ca] FFTW v1.10.0 [9aa1b823] FastClosures v0.3.2 [5789e2e9] FileIO v1.18.0 [53c48c17] FixedPointNumbers v0.8.5 [a2bd30eb] Graphics v1.1.3 [86223c79] Graphs v1.14.0 [f67ccb44] HDF5 v0.17.2 [076d061b] HashArrayMappedTries v0.2.0 [2c695a8d] HistogramThresholding v0.3.1 [3e5b6fbb] HostCPUFeatures v0.1.18 [615f187c] IfElse v0.1.1 [2803e5a7] ImageAxes v0.6.12 [c817782e] ImageBase v0.1.7 [cbc4b850] ImageBinarization v0.3.1 [f332f351] ImageContrastAdjustment v0.3.12 [a09fc81d] ImageCore v0.10.5 [89d5987c] ImageCorners v0.1.3 [51556ac3] ImageDistances v0.2.17 [6a3955dd] ImageFiltering v0.7.12 [82e4d734] ImageIO v0.6.9 [6218d12a] ImageMagick v1.4.2 [bc367c6b] ImageMetadata v0.9.10 [787d08f9] ImageMorphology v0.4.7 [2996bd0c] ImageQualityIndexes v0.3.7 [80713f31] ImageSegmentation v1.10.0 [4e3cecfd] ImageShow v0.3.8 [02fcd773] ImageTransformations v0.10.2 [8ad4436d] ImageUtils v0.2.12 [916415d5] Images v0.26.2 [9b13fd28] IndirectArrays v1.0.0 [d25df0c9] Inflate v0.1.5 [22cec73e] InitialValues v0.3.1 [1d092043] IntegralArrays v0.1.6 ⌅ [a98d9a8b] Interpolations v0.14.0 [8197267c] IntervalSets v0.7.13 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.6 [c8e1da08] IterTools v1.10.0 [42fd0dbc] IterativeSolvers v0.9.4 [033835bb] JLD2 v0.6.3 [692b3bcd] JLLWrappers v1.7.1 [b835a17e] JpegTurbo v0.1.6 [10f19ff3] LayoutPointers v0.1.17 [8cdb02fc] LazyModules v0.3.1 [9c8b4983] LightXML v0.9.3 [a4a2c56f] LinearOperatorCollection v2.4.1 [5c8ed15e] LinearOperators v2.13.0 [2ab3a3ac] LogExpFunctions v0.3.29 [bdcacae8] LoopVectorization v0.12.173 [3da0fdf6] MPIPreferences v0.1.11 [f7771a9a] MRIBase v0.4.6 [c57eb701] MRICoilSensitivities v0.1.4 [5a6f062f] MRIFiles v0.3.2 [fb1137e3] MRIOperators v0.4.3 [bdf86e05] MRIReco v0.9.2 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [dbb5928d] MappedArrays v0.4.3 [c03570c3] Memoize v0.4.4 ⌅ [626554b9] MetaGraphs v0.8.1 [e1d29d7a] Missings v1.2.0 [e94cdb99] MosaicViews v0.3.4 [efe261a4] NFFT v0.14.3 ⌅ [7424e34d] NFFTTools v0.2.7 [a3a9e032] NIfTI v0.6.1 [77ba4419] NaNMath v1.1.3 [b8a86587] NearestNeighbors v0.4.27 [f09324ee] Netpbm v1.1.1 [6fe1bfb0] OffsetArrays v1.17.0 [67456a42] OhMyThreads v0.8.5 [52e1d378] 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v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.18.0+0 [e37daf67] LibGit2_jll v1.9.2+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.30+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.5+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Downloading artifact: MRIRecoTestData [ Info: The test data is located at /home/pkgeval/.julia/artifacts/4a7a5048b08057bc2e03c69b78296a2eb04edfdd. [ Info: If you want to check the output of the tests, please head to /home/pkgeval/.julia/scratchspaces/00000000-0000-0000-0000-000000000000/tmp. ┌ Info: Read parameters timing │ t1 = 4.991617635 └ t2 = 1.205e-5 ┌ Warning: 1st half of image are the REAL part and 2nd half is the imaginary └ @ MRIFiles ~/.julia/packages/MRIFiles/9hXgx/src/Bruker/Bruker.jl:424 [ Info: Bruker protocol name : T2_RARE Direct Reconstruction... 13%|███▋ | ETA: 0:01:05 Direct Reconstruction... 100%|███████████████████████████| Time: 0:00:10 [ Info: Bruker protocol name : FLASH [ Info: Bruker protocol name : FLASH Direct Reconstruction... 50%|█████████████▌ | ETA: 0:00:05 Direct Reconstruction... 100%|███████████████████████████| Time: 0:00:04 [ Info: Bruker protocol name : FLASH [ Info: read offset not performed (only phase + slice) [ Info: Reconstruction of 3DUTE [ Info: Bruker protocol name : UTE3D BrukerFile Reco: Error During Test at /home/pkgeval/.julia/packages/MRIFiles/9hXgx/test/testBrukerFile.jl:46 Got exception outside of a @test MethodError: no method matching zero(::Type{Any}) This error has been manually thrown, explicitly, so the method may exist but be intentionally marked as unimplemented. Closest candidates are: zero(::Type{Any}) @ Base missing.jl:106 zero(::Type{T}) where T>:Missing @ Base missing.jl:108 zero(!Matched::Type{Union{}}, Any...) @ Base number.jl:365 ... Stacktrace: [1] zero(::Type{Any}) @ Base ./missing.jl:106 [2] _qreltype(::Type{Any}) @ LinearAlgebra /opt/julia/share/julia/stdlib/v1.14/LinearAlgebra/src/qr.jl:341 [3] qr(A::Matrix{Any}, arg::ColumnNorm; kwargs::@Kwargs{}) @ LinearAlgebra /opt/julia/share/julia/stdlib/v1.14/LinearAlgebra/src/qr.jl:424 [4] qr(A::Matrix{Any}, arg::ColumnNorm) @ LinearAlgebra /opt/julia/share/julia/stdlib/v1.14/LinearAlgebra/src/qr.jl:422 [5] \(A::Adjoint{Float64, Matrix{Float64}}, B::Vector{AbstractFloat}) @ LinearAlgebra /opt/julia/share/julia/stdlib/v1.14/LinearAlgebra/src/generic.jl:1243 [6] precomputePolyInterp(win::Function, m::Int64, σ::Float32, T::Type) @ NFFT ~/.julia/packages/NFFT/66xVn/src/precomputation.jl:317 [7] precomputation(k::Matrix{Float32}, N::Tuple{Int64, Int64, Int64}, Ñ::Tuple{Int64, Int64, Int64}, params::NFFT.NFFTParams{Float32, 3}) @ NFFT ~/.julia/packages/NFFT/66xVn/src/precomputation.jl:385 [8] NFFT.NFFTPlan(k::Matrix{Float32}, N::Tuple{Int64, Int64, Int64}; dims::UnitRange{Int64}, fftflags::UInt32, kwargs::@Kwargs{m::Int64, σ::Float64, blocking::Bool}) @ NFFT ~/.julia/packages/NFFT/66xVn/src/implementation.jl:97 [9] NFFTPlan @ ~/.julia/packages/NFFT/66xVn/src/implementation.jl:73 [inlined] [10] macro expansion @ ~/.julia/packages/NFFT/66xVn/src/NFFT.jl:52 [inlined] [11] macro expansion @ ./timing.jl:503 [inlined] [12] #plan_nfft#70 @ ~/.julia/packages/NFFT/66xVn/src/NFFT.jl:51 [inlined] [13] kwcall(::@NamedTuple{m::Int64, σ::Float64, fftflags::UInt32, blocking::Bool}, ::typeof(AbstractNFFTs.plan_nfft), ::NFFT.NFFTBackend, ::Type{Array}, ::Matrix{Float32}, ::Tuple{Int64, Int64, Int64}) @ NFFT ~/.julia/packages/NFFT/66xVn/src/NFFT.jl:49 [14] plan_nfft(::Type, ::Matrix{Float32}, ::Vararg{Any}; kwargs::@Kwargs{m::Int64, σ::Float64, fftflags::UInt32, blocking::Bool}) @ AbstractNFFTs ~/.julia/packages/AbstractNFFTs/xXIFn/src/derived.jl:32 [15] plan_nfft @ ~/.julia/packages/AbstractNFFTs/xXIFn/src/derived.jl:32 [inlined] [16] LinearOperatorNFFTExt.NFFTOpImpl(shape::Tuple{Int64, Int64, Int64}, tr::Matrix{Float32}; toeplitz::Bool, oversamplingFactor::Float64, kernelSize::Int64, S::Type{Vector{ComplexF32}}, kargs::@Kwargs{fftflags::UInt32}) @ LinearOperatorNFFTExt ~/.julia/packages/LinearOperatorCollection/BZigU/ext/LinearOperatorNFFTExt/NFFTOp.jl:44 [17] kwcall(::@NamedTuple{toeplitz::Bool, oversamplingFactor::Float64, kernelSize::Int64, S::DataType, fftflags::UInt32}, ::Type{LinearOperatorNFFTExt.NFFTOpImpl}, shape::Tuple{Int64, Int64, Int64}, tr::Matrix{Float32}) @ LinearOperatorNFFTExt ~/.julia/packages/LinearOperatorCollection/BZigU/ext/LinearOperatorNFFTExt/NFFTOp.jl:41 [18] #NFFTOp#1 @ ~/.julia/packages/LinearOperatorCollection/BZigU/ext/LinearOperatorNFFTExt/NFFTOp.jl:19 [inlined] [19] kwcall(::@NamedTuple{nodes::Matrix{Float32}, shape::Tuple{Int64, Int64, Int64}, S::DataType, fftflags::UInt32}, ::Type{NFFTOp}, ::Type{ComplexF32}) @ LinearOperatorNFFTExt ~/.julia/packages/LinearOperatorCollection/BZigU/ext/LinearOperatorNFFTExt/NFFTOp.jl:16 [20] fourierEncodingOp(shape::Tuple{Int64, Int64, Int64}, tr::Trajectory{Float32}, opName::String; subsampleIdx::Vector{Int64}, slice::Int64, correctionMap::Vector{ComplexF32}, echoImage::Bool, S::Type, copyOpsFn::Function, kargs::@Kwargs{}) @ MRIOperators ~/.julia/packages/MRIOperators/Ul2Uo/src/EncodingOp.jl:167 [21] fourierEncodingOp @ ~/.julia/packages/MRIOperators/Ul2Uo/src/EncodingOp.jl:140 [inlined] [22] #84 @ ./none:-1 [inlined] [23] iterate @ ./generator.jl:48 [inlined] [24] collect(itr::Base.Generator{UnitRange{Int64}, MRIOperators.var"#84#85"{@Kwargs{slice::Int64, correctionMap::Vector{ComplexF32}, S::DataType}, Tuple{Int64, Int64, Int64}, Vector{Vector{Int64}}, Vector{Trajectory{Float32}}}}) @ Base ./array.jl:828 [25] encodingOps_simple(acqData::AcquisitionData{Float32, 3}, shape::Tuple{Int64, Int64, Int64}; kargs::@Kwargs{slice::Int64, correctionMap::Vector{ComplexF32}, S::DataType}) @ MRIOperators ~/.julia/packages/MRIOperators/Ul2Uo/src/EncodingOp.jl:19 [26] kwcall(::@NamedTuple{slice::Int64, correctionMap::Vector{ComplexF32}, S::DataType}, ::typeof(encodingOps_simple), acqData::AcquisitionData{Float32, 3}, shape::Tuple{Int64, Int64, Int64}) @ MRIOperators ~/.julia/packages/MRIOperators/Ul2Uo/src/EncodingOp.jl:15 [27] reconstruction_direct(acqData::AcquisitionData{Float32, 3}, reconSize::Tuple{Int64, Int64, Int64}, weights::Vector{Vector{ComplexF32}}, correctionMap::Vector{ComplexF32}, arrayType::Type{Array}, S::Type) @ MRIReco ~/.julia/packages/MRIReco/XF7fg/src/Reconstruction/DirectReconstruction.jl:31 [28] reconstruction(acqData::AcquisitionData{Float32, 3}, recoParams::Dict{Symbol, Any}) @ MRIReco ~/.julia/packages/MRIReco/XF7fg/src/Reconstruction/Reconstruction.jl:40 [29] macro expansion @ ~/.julia/packages/MRIFiles/9hXgx/test/testBrukerFile.jl:129 [inlined] [30] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [31] macro expansion @ ~/.julia/packages/MRIFiles/9hXgx/test/testBrukerFile.jl:47 [inlined] [32] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [33] top-level scope @ ~/.julia/packages/MRIFiles/9hXgx/test/testBrukerFile.jl:3 [34] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:324 [35] top-level scope @ ~/.julia/packages/MRIFiles/9hXgx/test/runtests.jl:13 [36] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:324 [37] top-level scope @ none:6 [38] eval(m::Module, e::Any) @ Core ./boot.jl:517 [39] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [40] _start() @ Base ./client.jl:585 Test Summary: | Pass Error Total Time BrukerFile | 16 1 17 7m00.4s BrukerFile read parameters | 7 7 6.2s BrukerFile read 2dseq | 3 3 5.8s BrukerFile Reco | 6 1 7 6m48.3s RNG of the outermost testset: Random.Xoshiro(0x8906d754c97ec65c, 0xcf7ba3d11a5f3327, 0x1a6f69556496adf8, 0xf2286d4228745007, 0x1ac1ce422abbf5da) ERROR: LoadError: Some tests did not pass: 16 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/MRIFiles/9hXgx/test/testBrukerFile.jl:1 in expression starting at /home/pkgeval/.julia/packages/MRIFiles/9hXgx/test/runtests.jl:13 Testing failed after 495.48s ERROR: LoadError: Package MRIFiles errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3138 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3003 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:586 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:562 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [12] include(mod::Module, _path::String) @ Base ./Base.jl:323 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:585 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 1878.98s: package tests unexpectedly errored