Package evaluation to test MCMCTempering on Julia 1.14.0-DEV.1808 (1cd77b505e*) started at 2026-02-26T22:30:37.230 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 14.46s ################################################################################ # Installation # Installing MCMCTempering... Resolving package versions... Installed CompositionsBase ──────────── v0.1.2 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed MacroTools ────────────────── v0.5.16 Installed DataStructures ────────────── v0.19.3 Installed DefineSingletons ──────────── v0.1.2 Installed MicroCollections ──────────── v0.1.4 Installed FFTA ──────────────────────── v0.3.1 Installed MCMCTempering ─────────────── v0.3.2 Installed Adapt ─────────────────────── v4.4.0 Installed ConstructionBase ──────────── v1.6.0 Installed AbstractTrees ─────────────── v0.4.5 Installed AliasTables ───────────────── v1.1.3 Installed HypergeometricFunctions ───── v0.3.28 Installed KernelDensity ─────────────── v0.6.11 Installed StatsBase ─────────────────── v0.34.10 Installed FillArrays ────────────────── v1.16.0 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed Compat ────────────────────── v4.18.1 Installed OrderedCollections ────────── v1.8.1 Installed RecipesBase ───────────────── v1.3.4 Installed DataAPI ───────────────────── v1.16.0 Installed ProgressLogging ───────────── v0.1.6 Installed ConsoleProgressMonitor ────── v0.1.2 Installed Statistics ────────────────── v1.11.1 Installed DataValueInterfaces ───────── v1.0.0 Installed StatsAPI ──────────────────── v1.8.0 Installed InitialValues ─────────────── v0.3.1 Installed OffsetArrays ──────────────── v1.17.0 Installed ProgressMeter ─────────────── v1.11.0 Installed ArgCheck ──────────────────── v2.5.0 Installed MCMCDiagnosticTools ───────── v0.3.16 Installed PrecompileTools ───────────── v1.3.3 Installed LoggingExtras ─────────────── v1.2.0 Installed IrrationalConstants ───────── v0.2.6 Installed StaticArraysCore ──────────── v1.4.4 Installed ConcreteStructs ───────────── v0.2.3 Installed AbstractFFTs ──────────────── v1.5.0 Installed LogDensityProblems ────────── v2.2.0 Installed Ratios ────────────────────── v0.4.5 Installed StaticArrays ──────────────── v1.9.17 Installed TerminalLoggers ───────────── v0.1.7 Installed QuadGK ────────────────────── v2.11.2 Installed BangBang ──────────────────── v0.3.40 Installed ChainRulesCore ────────────── v1.26.0 Installed AxisAlgorithms ────────────── v1.1.0 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed IntegerMathUtils ──────────── v0.1.3 Installed LogExpFunctions ───────────── v0.3.29 Installed LeftChildRightSiblingTrees ── v0.2.1 Installed Rmath ─────────────────────── v0.9.0 Installed StringManipulation ────────── v0.4.4 Installed Requires ──────────────────── v1.3.1 Installed SplittablesBase ───────────── v0.1.15 Installed PrettyTables ──────────────── v2.4.0 Installed Distributions ─────────────── v0.25.123 Installed StatsFuns ─────────────────── v1.5.2 Installed MuladdMacro ───────────────── v0.2.4 Installed Interpolations ────────────── v0.16.2 Installed Tables ────────────────────── v1.12.1 Installed WoodburyMatrices ──────────── v1.1.0 Installed Reexport ──────────────────── v1.2.2 Installed IntervalSets ──────────────── v0.7.13 Installed SpecialFunctions ──────────── v2.7.1 Installed InverseFunctions ──────────── v0.1.17 Installed PtrArrays ─────────────────── v1.4.0 Installed AbstractMCMC ──────────────── v4.4.2 Installed Transducers ───────────────── v0.4.80 Installed Setfield ──────────────────── v1.1.2 Installed Missings ──────────────────── v1.2.0 Installed Baselet ───────────────────── v0.1.1 Installed JLLWrappers ───────────────── v1.7.1 Installed TableTraits ───────────────── v1.0.1 Installed LaTeXStrings ──────────────── v1.4.0 Installed Primes ────────────────────── v0.5.7 Installed SortingAlgorithms ─────────── v1.2.2 Installed ScientificTypesBase ───────── v3.1.0 Installed Preferences ───────────────── v1.5.2 Installed Crayons ───────────────────── v4.1.1 Installed MCMCChains ────────────────── v6.0.7 Installed PDMats ────────────────────── v0.11.37 Installed AxisArrays ────────────────── v0.4.8 Installed NaturalSort ───────────────── v1.0.0 Installed IterTools ─────────────────── v1.10.0 Installed DocStringExtensions ───────── v0.9.5 Installed RangeArrays ───────────────── v0.3.2 Installed StatisticalTraits ─────────── v3.5.0 Installed MLJModelInterface ─────────── v1.12.1 Installing 2 artifacts Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Updating `~/.julia/environments/v1.14/Project.toml` [ce233488] + MCMCTempering v0.3.2 Updating `~/.julia/environments/v1.14/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 ⌅ [80f14c24] + AbstractMCMC v4.4.2 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.8 ⌅ [198e06fe] + BangBang v0.3.40 [9718e550] + Baselet v0.1.1 [d360d2e6] + ChainRulesCore v1.26.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [88cd18e8] + ConsoleProgressMonitor v0.1.2 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [b86e33f2] + FFTA v0.3.1 [1a297f60] + FillArrays v1.16.0 [34004b35] + HypergeometricFunctions v0.3.28 [22cec73e] + InitialValues v0.3.1 [18e54dd8] + IntegerMathUtils v0.1.3 [a98d9a8b] + Interpolations v0.16.2 [8197267c] + IntervalSets v0.7.13 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [5ab0869b] + KernelDensity v0.6.11 [b964fa9f] + LaTeXStrings v1.4.0 [1d6d02ad] + LeftChildRightSiblingTrees v0.2.1 [6fdf6af0] + LogDensityProblems v2.2.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 ⌅ [c7f686f2] + MCMCChains v6.0.7 [be115224] + MCMCDiagnosticTools v0.3.16 [ce233488] + MCMCTempering v0.3.2 [e80e1ace] + MLJModelInterface v1.12.1 [1914dd2f] + MacroTools v0.5.16 ⌅ [128add7d] + MicroCollections v0.1.4 [e1d29d7a] + Missings v1.2.0 [46d2c3a1] + MuladdMacro v0.2.4 [c020b1a1] + NaturalSort v1.0.0 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.2 ⌅ [08abe8d2] + PrettyTables v2.4.0 [27ebfcd6] + Primes v0.5.7 [33c8b6b6] + ProgressLogging v0.1.6 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.2 [b3c3ace0] + RangeArrays v0.3.2 [c84ed2f1] + Ratios v0.4.5 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [30f210dd] + ScientificTypesBase v3.1.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.7.1 [171d559e] + SplittablesBase v0.1.15 [90137ffa] + StaticArrays v1.9.17 [1e83bf80] + StaticArraysCore v1.4.4 [64bff920] + StatisticalTraits v3.5.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [892a3eda] + StringManipulation v0.4.4 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [5d786b92] + TerminalLoggers v0.1.7 ⌃ [28d57a85] + Transducers v0.4.80 [efce3f68] + WoodburyMatrices v1.1.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.30+0 [05823500] + OpenLibm_jll v0.8.7+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 9.04s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4648.5 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/VOudJ/src/julia-1.13/activate_set.jl:78 Precompiling package dependencies... Precompiling packages... 4617.0 ms ✓ MacroTools 1720.6 ms ✓ InlineStrings 793.4 ms ✓ Reexport 1014.9 ms ✓ MappedArrays 1241.3 ms ✓ ConstructionBase 2278.1 ms ✓ IrrationalConstants 917.0 ms ✓ ChangesOfVariables 813.6 ms ✓ DataValueInterfaces 1026.7 ms ✓ StatsAPI 1342.3 ms ✓ IterTools 1069.9 ms ✓ IntervalSets 985.5 ms ✓ Functors 2116.8 ms ✓ Combinatorics 968.9 ms ✓ ArgCheck 800.6 ms ✓ CommonSolve 906.1 ms ✓ LaTeXStrings 2451.7 ms ✓ Baselet 1175.7 ms ✓ Statistics 962.1 ms ✓ Tricks 994.7 ms ✓ StaticArraysCore 1122.8 ms ✓ LRUCache 874.6 ms ✓ PtrArrays 775.7 ms ✓ NaturalSort 900.0 ms ✓ DataAPI 837.0 ms ✓ RealDot 3573.7 ms ✓ UnsafeAtomics 892.2 ms ✓ InvertedIndices 1689.9 ms ✓ RandomNumbers 991.0 ms ✓ InverseFunctions 873.7 ms ✓ CompositionsBase 1150.2 ms ✓ AbstractTrees 839.0 ms ✓ SimpleUnPack 1621.3 ms ✓ InitialValues 845.5 ms ✓ MuladdMacro 1093.9 ms ✓ AbstractFFTs 891.9 ms ✓ EnumX 2290.4 ms ✓ FillArrays 1250.6 ms ✓ ExprTools 845.3 ms ✓ IntegerMathUtils 835.0 ms ✓ ConcreteStructs 933.9 ms ✓ RangeArrays 1319.4 ms ✓ OrderedCollections 1576.2 ms ✓ FunctionWrappers 994.2 ms ✓ HashArrayMappedTries 1207.7 ms ✓ ProgressLogging 1194.5 ms ✓ DocStringExtensions 865.6 ms ✓ DefineSingletons 1711.5 ms ✓ OffsetArrays 791.0 ms ✓ IteratorInterfaceExtensions 1991.0 ms ✓ Crayons 1011.9 ms ✓ DelimitedFiles 1082.7 ms ✓ NaNMath 1257.7 ms ✓ Requires 1935.6 ms ✓ PDMats 1358.0 ms ✓ SparseInverseSubset 1480.5 ms ✓ WoodburyMatrices 2081.1 ms ✓ SentinelArrays 1099.4 ms ✓ LoggingExtras 1939.4 ms ✓ ProgressMeter 1345.3 ms ✓ ScientificTypesBase 1264.8 ms ✓ Compat 1195.9 ms ✓ Preferences 776.5 ms ✓ InplaceOps 4991.6 ms ✓ Lazy 1716.2 ms ✓ CommonSubexpressions 810.5 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 4164.7 ms ✓ ChangesOfVariables → ChangesOfVariablesTestExt 796.2 ms ✓ IntervalSets → IntervalSetsRandomExt 801.6 ms ✓ ConstructionBase → ConstructionBaseIntervalSetsExt 1368.7 ms ✓ Statistics → SparseArraysExt 794.0 ms ✓ IntervalSets → IntervalSetsStatisticsExt 888.9 ms ✓ DiffResults 795.8 ms ✓ LRUCache → SerializationExt 1002.1 ms ✓ AliasTables 1000.1 ms ✓ Missings 1035.7 ms ✓ PooledArrays 984.3 ms ✓ Atomix 1924.6 ms ✓ Random123 881.5 ms ✓ InverseFunctions → InverseFunctionsDatesExt 1700.2 ms ✓ InverseFunctions → InverseFunctionsTestExt 887.2 ms ✓ ChangesOfVariables → ChangesOfVariablesInverseFunctionsExt 824.8 ms ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 964.2 ms ✓ LeftChildRightSiblingTrees 4210.5 ms ✓ AbstractFFTs → AbstractFFTsTestExt 1559.3 ms ✓ FillArrays → FillArraysSparseArraysExt 973.4 ms ✓ FillArrays → FillArraysStatisticsExt 905.7 ms ✓ RuntimeGeneratedFunctions 1119.3 ms ✓ Primes 809.7 ms ✓ FunctionWrappersWrappers 1553.4 ms ✓ Libtask 928.4 ms ✓ ScopedValues 1382.4 ms ✓ LogExpFunctions 1163.7 ms ✓ SymbolicIndexingInterface 2002.3 ms ✓ LogDensityProblems 785.6 ms ✓ TableTraits 876.8 ms ✓ Ratios 964.2 ms ✓ Adapt 1449.0 ms ✓ FillArrays → FillArraysPDMatsExt 1451.4 ms ✓ AxisAlgorithms 960.0 ms ✓ ConsoleProgressMonitor 1417.1 ms ✓ StatisticalTraits 876.2 ms ✓ Compat → CompatLinearAlgebraExt 967.8 ms ✓ PrecompileTools 1336.9 ms ✓ JLLWrappers 1606.9 ms ✓ TruncatedStacktraces 3057.7 ms ✓ Setfield 1520.7 ms ✓ AxisArrays 1759.1 ms ✓ DensityInterface 5395.9 ms ✓ Accessors 1902.2 ms ✓ TerminalLoggers 2612.4 ms ✓ FFTA 861.7 ms ✓ LogExpFunctions → LogExpFunctionsChangesOfVariablesExt 854.3 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 1178.2 ms ✓ LogDensityProblemsAD 1847.9 ms ✓ Tables 1761.2 ms ✓ ArrayInterface 1302.4 ms ✓ GPUArraysCore 855.1 ms ✓ OffsetArrays → OffsetArraysAdaptExt 3183.2 ms ✓ MLJModelInterface 2635.4 ms ✓ ChainRulesCore 3384.3 ms ✓ DataStructures 2814.2 ms ✓ StringManipulation 13117.7 ms ✓ StaticArrays 3043.3 ms ✓ RecipesBase 1440.1 ms ✓ Rmath_jll 1588.6 ms ✓ OpenSpecFun_jll 3636.1 ms ✓ SplittablesBase 1921.2 ms ✓ Accessors → TestExt 2777.9 ms ✓ Accessors → IntervalSetsExt 2584.5 ms ✓ Accessors → LinearAlgebraExt 1604.2 ms ✓ StructArrays 1771.0 ms ✓ BangBang 1279.5 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 1341.9 ms ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt 1422.6 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 2188.3 ms ✓ Optimisers 2466.9 ms ✓ ZygoteRules 971.2 ms ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 3503.5 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 1464.2 ms ✓ SortingAlgorithms 2758.1 ms ✓ QuadGK WARNING: Imported binding Base._sortslices was undeclared at import time during import to NamedArrays. WARNING: Imported binding Base._negdims was undeclared at import time during import to NamedArrays. WARNING: Imported binding Base.DimSelector was undeclared at import time during import to NamedArrays. ERROR: LoadError: invalid method definition in NamedArrays: exported function Base._sortslices does not exist Stacktrace:  [1] top-level scope  @ ~/.julia/packages/NamedArrays/spYk1/src/rearrange.jl:106  [2] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:324  [3] top-level scope  @ ~/.julia/packages/NamedArrays/spYk1/src/NamedArrays.jl:35  [4] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [5] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3288  [6] top-level scope  @ stdin:5  [7] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3130  [9] include_string  @ ./loading.jl:3140 [inlined]  [10] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [11] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/NamedArrays/spYk1/src/rearrange.jl:106 in expression starting at /home/pkgeval/.julia/packages/NamedArrays/spYk1/src/NamedArrays.jl:9 in expression starting at stdin:5 ✗ NamedArrays 27919.8 ms ✓ PrettyTables 1517.5 ms ✓ StaticArrays → StaticArraysStatisticsExt 1619.7 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1427.7 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1609.8 ms ✓ FillArrays → FillArraysStaticArraysExt 1393.8 ms ✓ Adapt → AdaptStaticArraysExt 1607.3 ms ✓ Accessors → StaticArraysExt 1365.6 ms ✓ IntervalSets → IntervalSetsRecipesBaseExt 1569.2 ms ✓ Rmath 5314.9 ms ✓ SpecialFunctions 7329.5 ms ✓ Roots 1370.8 ms ✓ StructArrays → StructArraysSparseArraysExt 932.2 ms ✓ StructArrays → StructArraysGPUArraysCoreExt 856.8 ms ✓ StructArrays → StructArraysAdaptExt 1542.9 ms ✓ StructArrays → StructArraysStaticArraysExt 1049.5 ms ✓ Accessors → StructArraysExt 1939.1 ms ✓ MicroCollections 1098.9 ms ✓ BangBang → BangBangChainRulesCoreExt 1045.4 ms ✓ BangBang → BangBangStructArraysExt 1795.5 ms ✓ BangBang → BangBangStaticArraysExt 3506.8 ms ✓ SciMLOperators 2366.6 ms ✓ RecursiveArrayTools 3673.3 ms ✓ StatsBase 68182.6 ms ✓ DataFrames 8531.4 ms ✓ KernelAbstractions 4312.7 ms ✓ Interpolations 4337.4 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 2292.9 ms ✓ HypergeometricFunctions 1308.8 ms ✓ DiffRules 1342.7 ms ✓ Roots → RootsChainRulesCoreExt 12029.0 ms ✓ ChainRules 7324.5 ms ✓ Transducers 11121.4 ms ✓ SciMLBase 5715.7 ms ✓ BangBang → BangBangDataFramesExt 2776.7 ms ✓ KernelAbstractions → SparseArraysExt 2039.0 ms ✓ KernelAbstractions → LinearAlgebraExt 3013.5 ms ✓ StatsFuns 6603.6 ms ✓ ForwardDiff 5525.2 ms ✓ Transducers → TransducersDataFramesExt 4161.9 ms ✓ AbstractMCMC 13854.6 ms ✓ NNlib 3776.7 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 1008.8 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 10105.6 ms ✓ Distributions 2101.0 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 1785.4 ms ✓ LogDensityProblemsAD → LogDensityProblemsADForwardDiffExt 1388.3 ms ✓ Roots → RootsForwardDiffExt 2813.7 ms ✓ Interpolations → InterpolationsForwardDiffExt 6671.9 ms ✓ AdvancedHMC 4179.4 ms ✓ AbstractPPL 2675.3 ms ✓ NNlib → NNlibSpecialFunctionsExt 2829.7 ms ✓ NNlib → NNlibForwardDiffExt 3868.9 ms ✓ Distributions → DistributionsTestExt 3403.7 ms ✓ Distributions → DistributionsDensityInterfaceExt 3756.3 ms ✓ Distributions → DistributionsChainRulesCoreExt 5034.6 ms ✓ MCMCDiagnosticTools 12810.7 ms ✓ Tracker 4441.3 ms ✓ AdvancedPS 3939.6 ms ✓ AdvancedMH 3759.0 ms ✓ EllipticalSliceSampling 4397.7 ms ✓ KernelDensity 8684.4 ms ✓ Bijectors 9640.7 ms ✓ DistributionsAD 3649.0 ms ✓ Tracker → TrackerPDMatsExt 3206.6 ms ✓ LogDensityProblemsAD → LogDensityProblemsADTrackerExt 3695.9 ms ✓ ArrayInterface → ArrayInterfaceTrackerExt 3740.9 ms ✓ RecursiveArrayTools → RecursiveArrayToolsTrackerExt 3655.0 ms ✓ AdvancedMH → AdvancedMHStructArraysExt 3746.6 ms ✓ AdvancedMH → AdvancedMHForwardDiffExt 9130.1 ms ✓ MCMCChains 21925.2 ms ✓ DynamicPPL 3436.9 ms ✓ DistributionsAD → DistributionsADForwardDiffExt 7806.0 ms ✓ DistributionsAD → DistributionsADTrackerExt 13521.7 ms ✓ MCMCTempering 6492.0 ms ✓ AdvancedHMC → AdvancedHMCMCMCChainsExt 6426.1 ms ✓ AdvancedMH → AdvancedMHMCMCChainsExt 5589.9 ms ✓ AdvancedVI 13153.2 ms ✓ Turing 219 dependencies successfully precompiled in 685 seconds. 22 already precompiled. Precompilation completed after 718.67s ################################################################################ # Testing # Testing MCMCTempering Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_inDLgU/Project.toml` ⌅ [0bf59076] + AdvancedHMC v0.4.6 ⌅ [5b7e9947] + AdvancedMH v0.7.5 ⌅ [76274a88] + Bijectors v0.10.8 [a93c6f00] + DataFrames v1.8.1 ⌅ [f6369f11] + ForwardDiff v0.10.39 [996a588d] + LogDensityProblemsAD v1.13.1 ⌃ [be115224] ↓ MCMCDiagnosticTools v0.3.16 ⇒ v0.3.15 [ce233488] + MCMCTempering v0.3.2 ⌅ [fce5fe82] + Turing v0.24.4 Updating `/tmp/jl_inDLgU/Manifest.toml` ⌅ [7a57a42e] + AbstractPPL v0.5.4 [7d9f7c33] + Accessors v0.1.43 ⌅ [79e6a3ab] ↓ Adapt v4.4.0 ⇒ v3.7.2 ⌅ [0bf59076] + AdvancedHMC v0.4.6 ⌅ [5b7e9947] + AdvancedMH v0.7.5 ⌅ [576499cb] + AdvancedPS v0.4.3 ⌅ [b5ca4192] + AdvancedVI v0.1.6 ⌃ [4fba245c] + ArrayInterface v7.7.1 [a9b6321e] + Atomix v1.1.2 ⌅ [76274a88] + Bijectors v0.10.8 [082447d4] + ChainRules v1.73.0 [9e997f8a] + ChangesOfVariables v0.1.10 [861a8166] + Combinatorics v1.1.0 [38540f10] + CommonSolve v0.2.6 [bbf7d656] + CommonSubexpressions v0.3.1 [2569d6c7] + ConcreteStructs v0.2.3 [a93c6f00] + DataFrames v1.8.1 ⌅ [864edb3b] ↓ DataStructures v0.19.3 ⇒ v0.18.22 [8bb1440f] + DelimitedFiles v1.9.1 [b429d917] + DensityInterface v0.4.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [ced4e74d] + DistributionsAD v0.6.58 ⌅ [366bfd00] + DynamicPPL v0.21.6 ⌅ [cad2338a] + EllipticalSliceSampling v1.1.0 [4e289a0a] + EnumX v1.0.7 [e2ba6199] + ExprTools v0.1.10 ⌅ [f6369f11] + ForwardDiff v0.10.39 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 ⌅ [d9f16b24] + Functors v0.3.0 ⌅ [46192b85] + GPUArraysCore v0.1.5 [076d061b] + HashArrayMappedTries v0.2.0 [842dd82b] + InlineStrings v1.4.5 [505f98c9] + InplaceOps v0.3.0 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [63c18a36] + KernelAbstractions v0.9.40 [8ac3fa9e] + LRUCache v1.6.2 [50d2b5c4] + Lazy v0.15.1 ⌅ [6f1fad26] + Libtask v0.8.8 [996a588d] + LogDensityProblemsAD v1.13.1 ⌃ [be115224] ↓ MCMCDiagnosticTools v0.3.16 ⇒ v0.3.15 [ce233488] + MCMCTempering v0.3.2 [dbb5928d] + MappedArrays v0.4.3 ⌃ [872c559c] + NNlib v0.9.31 [77ba4419] + NaNMath v1.1.3 ⌅ [86f7a689] + NamedArrays v0.9.8 ⌃ [3bd65402] + Optimisers v0.2.15 ⌃ [90014a1f] ↓ PDMats v0.11.37 ⇒ v0.11.35 [2dfb63ee] + PooledArrays v1.4.3 [74087812] + Random123 v1.7.1 [e6cf234a] + RandomNumbers v1.6.0 [c1ae055f] + RealDot v0.1.0 ⌅ [731186ca] + RecursiveArrayTools v2.38.10 [f2b01f46] + Roots v2.2.12 [7e49a35a] + RuntimeGeneratedFunctions v0.5.17 ⌅ [0bca4576] + SciMLBase v1.92.0 ⌅ [c0aeaf25] + SciMLOperators v0.2.12 [7e506255] + ScopedValues v1.5.0 [91c51154] + SentinelArrays v1.4.9 [ce78b400] + SimpleUnPack v1.1.0 [dc90abb0] + SparseInverseSubset v0.1.2 ⌅ [2913bbd2] ↓ StatsBase v0.34.10 ⇒ v0.33.21 ⌃ [09ab397b] + StructArrays v0.6.18 ⌅ [2efcf032] + SymbolicIndexingInterface v0.2.2 [9f7883ad] + Tracker v0.2.38 [410a4b4d] + Tricks v0.1.13 [781d530d] + TruncatedStacktraces v1.4.0 ⌅ [fce5fe82] + Turing v0.24.4 [013be700] + UnsafeAtomics v0.3.0 [700de1a5] + ZygoteRules v0.2.7 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_inDLgU/Project.toml` ⌅ [80f14c24] AbstractMCMC v4.4.2 ⌅ [0bf59076] AdvancedHMC v0.4.6 ⌅ [5b7e9947] AdvancedMH v0.7.5 ⌅ [76274a88] Bijectors v0.10.8 [a93c6f00] DataFrames v1.8.1 [31c24e10] Distributions v0.25.123 [1a297f60] FillArrays v1.16.0 ⌅ [f6369f11] ForwardDiff v0.10.39 [6fdf6af0] LogDensityProblems v2.2.0 [996a588d] LogDensityProblemsAD v1.13.1 ⌅ [c7f686f2] MCMCChains v6.0.7 ⌃ [be115224] MCMCDiagnosticTools v0.3.15 [ce233488] MCMCTempering v0.3.2 [efcf1570] Setfield v1.1.2 [10745b16] Statistics v1.11.1 ⌅ [fce5fe82] Turing v0.24.4 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_inDLgU/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 ⌅ [80f14c24] AbstractMCMC v4.4.2 ⌅ [7a57a42e] AbstractPPL v0.5.4 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.43 ⌅ [79e6a3ab] Adapt v3.7.2 ⌅ [0bf59076] AdvancedHMC v0.4.6 ⌅ [5b7e9947] AdvancedMH v0.7.5 ⌅ [576499cb] AdvancedPS v0.4.3 ⌅ [b5ca4192] AdvancedVI v0.1.6 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 ⌃ [4fba245c] ArrayInterface v7.7.1 [a9b6321e] Atomix v1.1.2 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.8 ⌅ [198e06fe] BangBang v0.3.40 [9718e550] Baselet v0.1.1 ⌅ [76274a88] Bijectors v0.10.8 [082447d4] ChainRules v1.73.0 [d360d2e6] ChainRulesCore v1.26.0 [9e997f8a] ChangesOfVariables v0.1.10 [861a8166] Combinatorics v1.1.0 [38540f10] CommonSolve v0.2.6 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [88cd18e8] ConsoleProgressMonitor v0.1.2 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [244e2a9f] DefineSingletons v0.1.2 [8bb1440f] DelimitedFiles v1.9.1 [b429d917] DensityInterface v0.4.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [31c24e10] Distributions v0.25.123 [ced4e74d] DistributionsAD v0.6.58 [ffbed154] DocStringExtensions v0.9.5 ⌅ [366bfd00] DynamicPPL v0.21.6 ⌅ [cad2338a] EllipticalSliceSampling v1.1.0 [4e289a0a] EnumX v1.0.7 [e2ba6199] ExprTools v0.1.10 [b86e33f2] FFTA v0.3.1 [1a297f60] FillArrays v1.16.0 ⌅ [f6369f11] ForwardDiff v0.10.39 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 ⌅ [d9f16b24] Functors v0.3.0 ⌅ [46192b85] GPUArraysCore v0.1.5 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [22cec73e] InitialValues v0.3.1 [842dd82b] InlineStrings v1.4.5 [505f98c9] InplaceOps v0.3.0 [18e54dd8] IntegerMathUtils v0.1.3 [a98d9a8b] Interpolations v0.16.2 [8197267c] IntervalSets v0.7.13 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [63c18a36] KernelAbstractions v0.9.40 [5ab0869b] KernelDensity v0.6.11 [8ac3fa9e] LRUCache v1.6.2 [b964fa9f] LaTeXStrings v1.4.0 [50d2b5c4] Lazy v0.15.1 [1d6d02ad] LeftChildRightSiblingTrees v0.2.1 ⌅ [6f1fad26] Libtask v0.8.8 [6fdf6af0] LogDensityProblems v2.2.0 [996a588d] LogDensityProblemsAD v1.13.1 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 ⌅ [c7f686f2] MCMCChains v6.0.7 ⌃ [be115224] MCMCDiagnosticTools v0.3.15 [ce233488] MCMCTempering v0.3.2 [e80e1ace] MLJModelInterface v1.12.1 [1914dd2f] MacroTools v0.5.16 [dbb5928d] MappedArrays v0.4.3 ⌅ [128add7d] MicroCollections v0.1.4 [e1d29d7a] Missings v1.2.0 [46d2c3a1] MuladdMacro v0.2.4 ⌃ [872c559c] NNlib v0.9.31 [77ba4419] NaNMath v1.1.3 ⌅ [86f7a689] NamedArrays v0.9.8 [c020b1a1] NaturalSort v1.0.0 [6fe1bfb0] OffsetArrays v1.17.0 ⌃ [3bd65402] Optimisers v0.2.15 [bac558e1] OrderedCollections v1.8.1 ⌃ [90014a1f] PDMats v0.11.35 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.2 ⌅ [08abe8d2] PrettyTables v2.4.0 [27ebfcd6] Primes v0.5.7 [33c8b6b6] ProgressLogging v0.1.6 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.4.0 [1fd47b50] QuadGK v2.11.2 [74087812] Random123 v1.7.1 [e6cf234a] RandomNumbers v1.6.0 [b3c3ace0] RangeArrays v0.3.2 [c84ed2f1] Ratios v0.4.5 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 ⌅ [731186ca] RecursiveArrayTools v2.38.10 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [f2b01f46] Roots v2.2.12 [7e49a35a] RuntimeGeneratedFunctions v0.5.17 ⌅ [0bca4576] SciMLBase v1.92.0 ⌅ [c0aeaf25] SciMLOperators v0.2.12 [30f210dd] ScientificTypesBase v3.1.0 [7e506255] ScopedValues v1.5.0 [91c51154] SentinelArrays v1.4.9 [efcf1570] Setfield v1.1.2 [ce78b400] SimpleUnPack v1.1.0 [a2af1166] SortingAlgorithms v1.2.2 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.7.1 [171d559e] SplittablesBase v0.1.15 [90137ffa] StaticArrays v1.9.17 [1e83bf80] StaticArraysCore v1.4.4 [64bff920] StatisticalTraits v3.5.0 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 ⌅ [2913bbd2] StatsBase v0.33.21 [4c63d2b9] StatsFuns v1.5.2 [892a3eda] StringManipulation v0.4.4 ⌃ [09ab397b] StructArrays v0.6.18 ⌅ [2efcf032] SymbolicIndexingInterface v0.2.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [5d786b92] TerminalLoggers v0.1.7 [9f7883ad] Tracker v0.2.38 ⌃ [28d57a85] Transducers v0.4.80 [410a4b4d] Tricks v0.1.13 [781d530d] TruncatedStacktraces v1.4.0 ⌅ [fce5fe82] Turing v0.24.4 [013be700] UnsafeAtomics v0.3.0 [efce3f68] WoodburyMatrices v1.1.0 [700de1a5] ZygoteRules v0.2.7 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [4536629a] OpenBLAS_jll v0.3.30+0 [05823500] OpenLibm_jll v0.8.7+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [8e850b90] libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... WARNING: Method definition (::Type{Main.StateHistoryCallback{A, F} where F where A})(Any, Any) in module Main at /home/pkgeval/.julia/packages/MCMCTempering/movdr/test/utils.jl:17 overwritten at /home/pkgeval/.julia/packages/MCMCTempering/movdr/test/utils.jl:21. The temperature was sorted to ensure decreasing order. ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 525.817 │ :param_1 => 351.861 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 563.374 └ :param_1 => 326.26 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 525.817 │ :param_1 => 351.861 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 547.643 └ :param_1 => 479.411 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 525.817 │ :param_1 => 351.861 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 356.973 └ :param_1 => 379.829 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 525.817 │ :param_1 => 351.861 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 396.094 └ :param_1 => 347.929 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 525.817 │ :param_1 => 351.861 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 693.52 └ :param_1 => 516.749 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :m => 1414.91 │ :s => 1763.37 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :m => 1513.85 └ :s => 1821.69 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :m => 1414.91 │ :s => 1763.37 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :m => 2568.02 └ :s => 2504.84 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :m => 267.382 │ :s => 384.235 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :m => 302.021 └ :s => 444.588 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :m => 267.382 │ :s => 384.235 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :m => 928.538 └ :s => 1222.34 SwapSampler: Test Failed at /home/pkgeval/.julia/packages/MCMCTempering/movdr/test/abstractmcmc.jl:225 Expression: ≈(vec(mean(params_resolved; dims = 2)), [5.0, 5.0], atol = 0.2) Evaluated: [4.82404232826235, 4.844828246893872] ≈ [5.0, 5.0] (atol=0.2) Stacktrace: [1] top-level scope @ ~/.julia/packages/MCMCTempering/movdr/test/abstractmcmc.jl:2 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/MCMCTempering/movdr/test/abstractmcmc.jl:171 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [5] macro expansion @ ~/.julia/packages/MCMCTempering/movdr/test/abstractmcmc.jl:225 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (0.9238767942303391, 1.0, 0.06838600635856704) chain 1: Test Failed at /home/pkgeval/.julia/packages/MCMCTempering/movdr/test/test_utils.jl:71 Expression: all((isapprox(std(chain[sym]), std_true[sym], atol = atol[sym]) for sym = names(chain, :parameters))) Evaluated: all(Base.Generator{Vector{Symbol}, var"#24#25"{Chains{Float64, AxisArrays.AxisArray{Float64, 3, Array{Float64, 3}, Tuple{AxisArrays.Axis{:iter, StepRange{Int64, Int64}}, AxisArrays.Axis{:var, Vector{Symbol}}, AxisArrays.Axis{:chain, UnitRange{Int64}}}}, Missing, @NamedTuple{parameters::Vector{Symbol}, internals::Vector{Symbol}}, @NamedTuple{}}, Dict{Symbol, Float64}, Dict{Symbol, Float64}}}(var"#24#25"{Chains{Float64, AxisArrays.AxisArray{Float64, 3, Array{Float64, 3}, Tuple{AxisArrays.Axis{:iter, StepRange{Int64, Int64}}, AxisArrays.Axis{:var, Vector{Symbol}}, AxisArrays.Axis{:chain, UnitRange{Int64}}}}, Missing, @NamedTuple{parameters::Vector{Symbol}, internals::Vector{Symbol}}, @NamedTuple{}}, Dict{Symbol, Float64}, Dict{Symbol, Float64}}(MCMC chain (1000×2×1 Array{Float64, 3}), Dict(:param_1 => 1.0), Dict(:param_1 => 0.06838600635856704)), [:param_1])) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] [2] test_std(chain::Chains{Float64, AxisArrays.AxisArray{Float64, 3, Array{Float64, 3}, Tuple{AxisArrays.Axis{:iter, StepRange{Int64, Int64}}, AxisArrays.Axis{:var, Vector{Symbol}}, AxisArrays.Axis{:chain, UnitRange{Int64}}}}, Missing, @NamedTuple{parameters::Vector{Symbol}, internals::Vector{Symbol}}, @NamedTuple{}}, std_true::Dict{Symbol, Float64}; n::Int64, kwargs::@Kwargs{}) @ Main ~/.julia/packages/MCMCTempering/movdr/test/test_utils.jl:71 [3] test_std @ ~/.julia/packages/MCMCTempering/movdr/test/test_utils.jl:67 [inlined] [4] macro expansion @ ~/.julia/packages/MCMCTempering/movdr/test/test_utils.jl:123 [inlined] [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2324 [inlined] [6] test_chains_with_monotonic_variance(chains::Vector{Chains{Float64, AxisArrays.AxisArray{Float64, 3, Array{Float64, 3}, Tuple{AxisArrays.Axis{:iter, StepRange{Int64, Int64}}, AxisArrays.Axis{:var, Vector{Symbol}}, AxisArrays.Axis{:chain, UnitRange{Int64}}}}, Missing, @NamedTuple{parameters::Vector{Symbol}, internals::Vector{Symbol}}, @NamedTuple{}}}, mean_true::Zeros{Float64, 1, Tuple{Base.OneTo{Int64}}}, std_true::Vector{Dict{Symbol, Float64}}; significance::Float64, kwargs::@Kwargs{}) @ Main ~/.julia/packages/MCMCTempering/movdr/test/test_utils.jl:121 ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.155766552557887, 1.118033988749895, 0.08408352500070834) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.3038093316684822, 1.25, 0.11029959192172413) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.4366669336186841, 1.3975424859373684, 0.11071059753194522) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.5613005204217578, 1.5624999999999998, 0.10761994481706154) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.8148414353390823, 1.7469281074217102, 0.136948987218433) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.000277222438713, 1.9531249999999996, 0.15647411219260485) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.2612874567595447, 2.1836601342771376, 0.17060115242258558) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.486641503616584, 2.4414062499999996, 0.1948604635802913) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.7263981087461877, 2.729575167846422, 0.23505573204522728) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (3.1692423129491294, 3.051757812499999, 0.2699027380961768) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.001867902621567, 1.0, 0.07782025420574376) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.1685518199573632, 1.118033988749895, 0.09150403810201424) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.2818992139383298, 1.25, 0.10885617163727289) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.3805434842743505, 1.3975424859373684, 0.11186248699120335) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.5623909997001841, 1.5624999999999998, 0.14450149329648873) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.701971720159619, 1.7469281074217102, 0.14339880972641328) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.9555214399814356, 1.9531249999999996, 0.21037677317959683) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.167384342017209, 2.1836601342771376, 0.19855955828254185) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.4761042634620964, 2.4414062499999996, 0.2335728211133848) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.5734399305558195, 2.729575167846422, 0.3036176858138253) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.9247621024483004, 3.051757812499999, 0.4619161806561592) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.0029616548504556, 1.0, 0.06607448701565082) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.1105972755695728, 1.118033988749895, 0.07881476715557675) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.220291186902518, 1.25, 0.08277493181249986) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.4022451206621975, 1.3975424859373684, 0.10594534038967866) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.5263187942543832, 1.5624999999999998, 0.11572597231899756) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.7887773594098377, 1.7469281074217102, 0.14864301891488907) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.9647279324699976, 1.9531249999999996, 0.14436075510587879) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.195408500535964, 2.1836601342771376, 0.16030878821953648) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.4525157164588673, 2.4414062499999996, 0.1964711711538487) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.724790501293317, 2.729575167846422, 0.23935736807318975) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.9846233772679573, 3.051757812499999, 0.2828341330169246) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.0029616548504556, 1.0, 0.06607448701565082) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.1105972755695728, 1.118033988749895, 0.07881476715557675) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.220291186902518, 1.25, 0.08277493181249986) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.4022451206621975, 1.3975424859373684, 0.10594534038967866) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.5263187942543832, 1.5624999999999998, 0.11572597231899756) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.7887773594098377, 1.7469281074217102, 0.14864301891488907) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.9647279324699976, 1.9531249999999996, 0.14436075510587879) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.195408500535964, 2.1836601342771376, 0.16030878821953648) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.4525157164588673, 2.4414062499999996, 0.1964711711538487) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.724790501293317, 2.729575167846422, 0.23935736807318975) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.9846233772679573, 3.051757812499999, 0.2828341330169246) Test Summary: | Pass Fail Total Time MCMCTempering.jl | 1519 2 1521 5m20.2s Swapping | 34 34 1.7s Simple MvNormal with no expected swaps | 9 9 31.4s GMM 1D | 9 9 9.8s MvNormal 2D with different swap strategies | 53 53 56.6s Turing.jl | 26 26 2m16.8s AbstractMCMC | 1261 1 1262 43.2s CompositionSampler(.., saveall=true) | 205 205 6.0s CompositionSampler(.., saveall=false) | 105 105 0.2s CompositionSampler(.., saveall=Val{true}()) | 205 205 1.6s CompositionSampler(.., saveall=Val{false}()) | 105 105 1.6s RepeatedSampler(..., saveall=true) | 204 204 2.6s RepeatedSampler(..., saveall=false) | 104 104 0.1s RepeatedSampler(..., saveall=Val{true}()) | 204 204 2.6s RepeatedSampler(..., saveall=Val{false}()) | 104 104 1.5s MultiSampler | 15 15 7.4s SwapSampler | 9 1 10 19.4s bundle_samples with Vector | 2 2 1.3s bundle_samples with Vector{MCMCChains.Chains} | 3 3 2.5s Simple tempered Gaussian (closed form) | 127 1 128 40.4s TemperedSampler | 31 1 32 24.9s chain 1 | 1 1 2 13.3s chain 2 | 2 2 0.0s chain 3 | 2 2 0.0s chain 4 | 2 2 0.0s chain 5 | 2 2 0.0s chain 6 | 2 2 0.0s chain 7 | 2 2 0.0s chain 8 | 2 2 0.0s chain 9 | 2 2 0.0s chain 10 | 2 2 0.0s chain 11 | 2 2 0.0s MultiSampler without swapping | 32 32 5.9s MultiSampler with swapping (saveall=true) | 32 32 5.2s MultiSampler with swapping (saveall=true) | 32 32 3.7s RNG of the outermost testset: Random.Xoshiro(0x1e27c317a1efa223, 0xcdf66de89bb8c357, 0x08820746d570e9ca, 0xd92e4f00898d2b46, 0xa2d95a37632aac04) ERROR: LoadError: Some tests did not pass: 1519 passed, 2 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/MCMCTempering/movdr/test/runtests.jl:186 Testing failed after 366.53s ERROR: LoadError: Package MCMCTempering errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3138 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3003 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:586 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:562 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [12] include(mod::Module, _path::String) @ Base ./Base.jl:323 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:585 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 1132.61s: package has test failures