Package evaluation to test MendelImpute on Julia 1.14.0-DEV.1720 (f38c537ec6*) started at 2026-02-16T02:54:05.442 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 11.93s ################################################################################ # Installation # Installing MendelImpute... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [e47305d1] + MendelImpute v1.2.6 Updating `~/.julia/environments/v1.14/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.43 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [7d9fca2a] + Arpack v0.5.4 [4fba245c] + ArrayInterface v7.22.0 [4c555306] + ArrayLayouts v1.12.2 [67c07d97] + Automa v1.1.0 [13072b0f] + AxisAlgorithms v1.1.0 ⌅ [6db4b851] + BGEN v0.1.17 [28d598bf] + BGZFStreams v0.3.2 [fbb218c0] + BSON v0.3.9 [47718e42] + BioGenerics v0.1.5 [d1d4a3ce] + BitFlags v0.1.9 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [e1450e63] + BufferedStreams v1.2.2 [2a0fbf3d] + CPUSummary v0.2.7 [336ed68f] + CSV v0.10.15 [d360d2e6] + ChainRulesCore v1.26.0 [fb6a15b2] + CloseOpenIntervals v0.1.13 [aaaa29a8] + Clustering v0.15.8 [523fee87] + CodecBzip2 v0.8.5 [ba30903b] + CodecXz v0.7.4 [944b1d66] + CodecZlib v0.7.8 [6b39b394] + CodecZstd v0.8.7 [35d6a980] + ColorSchemes v3.31.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [861a8166] + Combinatorics v1.1.0 [38540f10] + CommonSolve v0.2.6 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [f0e56b4a] + ConcurrentUtilities v2.5.0 [187b0558] + ConstructionBase v1.6.0 [d38c429a] + Contour v0.6.3 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [a10d1c49] + DBInterface v2.6.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [460bff9d] + ExceptionUnwrapping v0.1.11 [c87230d0] + FFMPEG v0.4.5 [b86e33f2] + FFTA v0.3.1 [5789e2e9] + FileIO v1.18.0 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.16.0 [53c48c17] + FixedPointNumbers v0.8.5 [1fa38f19] + Format v1.3.7 [28b8d3ca] + GR v0.73.22 [c27321d9] + Glob v1.4.0 [42e2da0e] + Grisu v1.0.2 [d853e229] + GroupSlices v0.0.3 [cd3eb016] + HTTP v1.10.19 [3e5b6fbb] + HostCPUFeatures v0.1.18 [34004b35] + HypergeometricFunctions v0.3.28 [09f84164] + HypothesisTests v0.11.6 [615f187c] + IfElse v0.1.1 [842dd82b] + InlineStrings v1.4.5 [18e54dd8] + IntegerMathUtils v0.1.3 [a98d9a8b] + Interpolations v0.16.2 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 ⌅ [033835bb] + JLD2 v0.4.55 [1019f520] + JLFzf v0.1.11 [692b3bcd] + JLLWrappers v1.7.1 [9da8a3cd] + JLSO v2.7.0 [682c06a0] + JSON v1.4.0 [5ab0869b] + KernelDensity v0.6.11 [b964fa9f] + LaTeXStrings v1.4.0 [23fbe1c1] + Latexify v0.16.10 [10f19ff3] + LayoutPointers v0.1.17 ⌅ [5078a376] + LazyArrays v1.10.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [bdcacae8] + LoopVectorization v0.12.173 [1914dd2f] + MacroTools 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[01d81517] + RecipesPipeline v0.6.12 [189a3867] + Reexport v1.2.2 [05181044] + RelocatableFolders v1.0.1 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [f2b01f46] + Roots v2.2.10 [fdea26ae] + SIMD v3.7.2 [94e857df] + SIMDTypes v0.1.0 [476501e8] + SLEEFPirates v0.6.43 [0aa819cd] + SQLite v1.8.0 [431bcebd] + SciMLPublic v1.0.1 [6c6a2e73] + Scratch v1.3.0 [91c51154] + SentinelArrays v1.4.9 [992d4aef] + Showoff v1.0.3 [777ac1f9] + SimpleBufferStream v1.2.0 [4e780e97] + SnpArrays v0.3.23 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.7.1 [860ef19b] + StableRNGs v1.0.4 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.9.0 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [f3b207a7] + StatsPlots v0.15.8 [892a3eda] + StringManipulation v0.4.2 [ec057cc2] + StructUtils v2.6.3 [ab02a1b2] + TableOperations 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Xorg_xtrans_jll v1.6.0+0 [c4b69c83] + dlfcn_win32_jll v1.4.2+0 [35ca27e7] + eudev_jll v3.2.14+0 [214eeab7] + fzf_jll v0.61.1+0 [a4ae2306] + libaom_jll v3.13.1+0 [0ac62f75] + libass_jll v0.17.4+0 [1183f4f0] + libdecor_jll v0.2.2+0 [2db6ffa8] + libevdev_jll v1.13.4+0 [f638f0a6] + libfdk_aac_jll v2.0.4+0 [36db933b] + libinput_jll v1.28.1+0 [b53b4c65] + libpng_jll v1.6.55+0 [f27f6e37] + libvorbis_jll v1.3.8+0 [009596ad] + mtdev_jll v1.1.7+0 ⌅ [1270edf5] + x264_jll v10164.0.1+0 [dfaa095f] + x265_jll v4.1.0+0 [d8fb68d0] + xkbcommon_jll v1.13.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.18.0+0 [e37daf67] + LibGit2_jll v1.9.2+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.12.2 [4536629a] + OpenBLAS_jll v0.3.30+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.5+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 6.02s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 8574.4 ms ✓ JLSO 6453.9 ms ✓ VCFTools 26841.5 ms ✓ SnpArrays 24656.7 ms ✓ StatsPlots 32654.2 ms ✓ MendelImpute 5 dependencies successfully precompiled in 106 seconds. 335 already precompiled. Precompilation completed after 125.44s ################################################################################ # Testing # Testing MendelImpute Status `/tmp/jl_YQPfIF/Project.toml` ⌅ [6db4b851] BGEN v0.1.17 [6e4b80f9] BenchmarkTools v1.6.3 [336ed68f] CSV v0.10.15 [a93c6f00] DataFrames v1.8.1 [b4f34e82] Distances v0.10.12 [5789e2e9] FileIO v1.18.0 [53c48c17] FixedPointNumbers v0.8.5 [d853e229] GroupSlices v0.0.3 ⌅ [033835bb] JLD2 v0.4.55 [9da8a3cd] JLSO v2.7.0 ⌅ [5078a376] LazyArrays v1.10.0 [e47305d1] MendelImpute v1.2.6 [92933f4c] ProgressMeter v1.11.0 [4e780e97] SnpArrays v0.3.23 [276daf66] SpecialFunctions v2.7.1 [10745b16] Statistics v1.11.1 [2913bbd2] StatsBase v0.34.10 [f3b207a7] StatsPlots v0.15.8 [a620830f] VCFTools v0.2.10 [28eba6e3] VariantCallFormat v0.5.9 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_YQPfIF/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.43 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [7d9fca2a] Arpack v0.5.4 [4fba245c] ArrayInterface v7.22.0 [4c555306] ArrayLayouts v1.12.2 [67c07d97] Automa v1.1.0 [13072b0f] AxisAlgorithms v1.1.0 ⌅ [6db4b851] BGEN v0.1.17 [28d598bf] BGZFStreams v0.3.2 [fbb218c0] BSON v0.3.9 [6e4b80f9] BenchmarkTools v1.6.3 [47718e42] BioGenerics v0.1.5 [d1d4a3ce] BitFlags v0.1.9 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [e1450e63] BufferedStreams v1.2.2 [2a0fbf3d] CPUSummary v0.2.7 [336ed68f] CSV v0.10.15 [d360d2e6] ChainRulesCore v1.26.0 [fb6a15b2] CloseOpenIntervals v0.1.13 [aaaa29a8] Clustering v0.15.8 [523fee87] CodecBzip2 v0.8.5 [ba30903b] CodecXz v0.7.4 [944b1d66] CodecZlib v0.7.8 [6b39b394] CodecZstd v0.8.7 [35d6a980] ColorSchemes v3.31.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 [861a8166] Combinatorics v1.1.0 [38540f10] CommonSolve v0.2.6 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [a33af91c] 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[18e54dd8] IntegerMathUtils v0.1.3 [a98d9a8b] Interpolations v0.16.2 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 ⌅ [033835bb] JLD2 v0.4.55 [1019f520] JLFzf v0.1.11 [692b3bcd] JLLWrappers v1.7.1 [9da8a3cd] JLSO v2.7.0 [682c06a0] JSON v1.4.0 [5ab0869b] KernelDensity v0.6.11 [b964fa9f] LaTeXStrings v1.4.0 [23fbe1c1] Latexify v0.16.10 [10f19ff3] LayoutPointers v0.1.17 ⌅ [5078a376] LazyArrays v1.10.0 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 [bdcacae8] LoopVectorization v0.12.173 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 ⌅ [a3b82374] MatrixFactorizations v2.2.0 [739be429] MbedTLS v1.1.9 [442fdcdd] Measures v0.3.3 [f28f55f0] Memento v1.4.1 [e47305d1] MendelImpute v1.2.6 [e1d29d7a] Missings v1.2.0 [46d2c3a1] MuladdMacro v0.2.4 [6f286f6a] MultivariateStats v0.10.3 [77ba4419] NaNMath v1.1.3 [b8a86587] NearestNeighbors v0.4.27 [510215fc] 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Testing Running tests... Test Summary: | Pass Total Time search breakpoints | 8 8 2.5s Test Summary: | Pass Total Time intersect code | 9 9 0.7s Test Summary: | Pass Total Time dynamic programming | 10 10 3.6s ┌ Warning: `Progress(n::Integer, dt::Real, desc::AbstractString = "Progress: ", barlen = nothing, color::Symbol = :green, output::IO = stderr; offset::Integer = 0)` is deprecated, use `Progress(n; dt = dt, desc = desc, barlen = barlen, color = color, output = output, offset = offset)` instead. │ caller = ip:0x0 └ @ Core :-1 importing reference data... 37%|████████▉ | ETA: 0:00:09 importing reference data... 72%|█████████████████▍ | ETA: 0:00:04 importing reference data... 100%|████████████████████████| Time: 0:00:15 115.650460 seconds (219.89 M allocations: 11.806 GiB, 3.58% gc time, 77.49% compilation time: 3% of which was recompilation) 11.312110 seconds (12.63 M allocations: 755.290 MiB, 10.60% gc time, 98.30% compilation time: <1% of which was recompilation) Test Summary: | Pass Total Time compress | 11 11 2m07.6s Number of threads = 1 Importing reference haplotype data... Computing optimal haplotypes... 12%|██▌ | ETA: 0:02:36 Computing optimal haplotypes... 100%|████████████████████| Time: 0:00:25 Phasing... 2%|▉ | ETA: 0:04:10 Phasing... 100%|█████████████████████████████████████████| Time: 0:00:07 Total windows = 16, averaging ~ 708 unique haplotypes per window. Timings: Data import = 1.30352 seconds import target data = 0.945132 seconds import compressed haplotypes = 0.358387 seconds Computing haplotype pair = 27.9253 seconds BLAS3 mul! to get M and N = 0.159176 seconds per thread haplopair search = 3.27046 seconds per thread initializing missing = 0.0115692 seconds per thread allocating and viewing = 0.0280389 seconds per thread index conversion = 0.000225209 seconds per thread Phasing by win-win intersection = 7.9819 seconds Window-by-window intersection = 0.00305513 seconds per thread Breakpoint search = 3.04806 seconds per thread Recording result = 0.000991964 seconds per thread Imputation = 8.99172 seconds Imputing missing = 4.67081 seconds Writing to file = 4.32092 seconds Total time = 46.4015 seconds 52.213672 seconds (18.00 M allocations: 1.082 GiB, 2.64% gc time, 88.95% compilation time: <1% of which was recompilation) Test Summary: | Pass Total Time impute & phasing | 10 10 1m23.1s Number of threads = 1 Importing reference haplotype data... Total windows = 16, averaging ~ 708 unique haplotypes per window. Timings: Data import = 0.378275 seconds import target data = 0.19796 seconds import compressed haplotypes = 0.180314 seconds Computing haplotype pair = 3.76794 seconds BLAS3 mul! to get M and N = 0.15859 seconds per thread haplopair search = 3.56096 seconds per thread initializing missing = 0.0128351 seconds per thread allocating and viewing = 0.0312387 seconds per thread index conversion = 0.000122658 seconds per thread Phasing by win-win intersection = 0.149681 seconds Window-by-window intersection = 0.00255537 seconds per thread Breakpoint search = 0.142257 seconds per thread Recording result = 0.000840724 seconds per thread Imputation = 0.85462 seconds Imputing missing = 0.0548635 seconds Writing to file = 0.799757 seconds Total time = 5.15093 seconds 5.151060 seconds (1.81 M allocations: 154.321 MiB, 2.26% gc time) Number of threads = 1 Importing reference haplotype data... Total windows = 16, averaging ~ 708 unique haplotypes per window. Timings: Data import = 3.37553 seconds import target data = 3.16367 seconds import compressed haplotypes = 0.211859 seconds Computing haplotype pair = 3.52659 seconds BLAS3 mul! to get M and N = 0.149954 seconds per thread haplopair search = 3.33333 seconds per thread initializing missing = 0.0110109 seconds per thread allocating and viewing = 0.0277992 seconds per thread index conversion = 0.00012012 seconds per thread Phasing by win-win intersection = 0.192775 seconds Window-by-window intersection = 0.00302056 seconds per thread Breakpoint search = 0.184314 seconds per thread Recording result = 0.000987772 seconds per thread Imputation = 1.87483 seconds Imputing missing = 0.0675697 seconds Writing to file = 1.80726 seconds Total time = 8.97012 seconds 8.970214 seconds (1.66 M allocations: 152.292 MiB, 0.75% gc time, 46.77% compilation time) Number of threads = 1 Importing reference haplotype data... Computing optimal haplotypes... 81%|████████████████▎ | ETA: 0:00:01 Computing optimal haplotypes... 100%|████████████████████| Time: 0:00:05 Total windows = 16, averaging ~ 708 unique haplotypes per window. Timings: Data import = 1.65739 seconds import target data = 1.47175 seconds import compressed haplotypes = 0.185643 seconds Computing haplotype pair = 6.36093 seconds BLAS3 mul! to get M and N = 0.157776 seconds per thread haplopair search = 3.39054 seconds per thread initializing missing = 0.0128448 seconds per thread allocating and viewing = 0.0299379 seconds per thread index conversion = 0.00012512 seconds per thread Phasing by win-win intersection = 5.30198 seconds Window-by-window intersection = 0.00293027 seconds per thread Breakpoint search = 2.96097 seconds per thread Recording result = 0.000947014 seconds per thread Imputation = 4.0381 seconds Imputing missing = 3.45109 seconds Writing to file = 0.58701 seconds Total time = 17.3595 seconds 17.384510 seconds (6.35 M allocations: 371.774 MiB, 0.52% gc time, 70.10% compilation time) Test Summary: | Pass Total Time PLINK and dosage inputs | 2 2 36.6s Number of threads = 1 Importing reference haplotype data... Total windows = 16, averaging ~ 708 unique haplotypes per window. Timings: Data import = 0.393996 seconds import target data = 0.207176 seconds import compressed haplotypes = 0.18682 seconds Computing haplotype pair = 3.43881 seconds BLAS3 mul! to get M and N = 0.149242 seconds per thread haplopair search = 3.24233 seconds per thread initializing missing = 0.0128554 seconds per thread allocating and viewing = 0.0296754 seconds per thread index conversion = 0.000116909 seconds per thread Phasing by win-win intersection = 1.3526 seconds Window-by-window intersection = 0.00304082 seconds per thread Breakpoint search = 0.19507 seconds per thread Recording result = 0.00016791 seconds per thread Imputation = 2.26632 seconds Imputing missing = 2.97932e-5 seconds Writing to file = 2.26629 seconds Total time = 7.45208 seconds 7.452436 seconds (3.06 M allocations: 173.741 MiB, 0.33% gc time, 45.23% compilation time) importing reference data... 28%|██████▊ | ETA: 0:00:13 importing reference data... 63%|███████████████▎ | ETA: 0:00:06 importing reference data... 99%|███████████████████████▉| ETA: 0:00:00 importing reference data... 100%|████████████████████████| Time: 0:00:15 Test Summary: | Pass Total Time decompress ultra-compressed files | 1 1 29.6s Test Summary: | Pass Total Time 0 allocations in phasing | 2 2 8.5s Test Summary: | Pass Total Time 0 allocation in haplopair | 2 2 18.5s import BGEN: Error During Test at /home/pkgeval/.julia/packages/MendelImpute/z2M6N/test/runtests.jl:316 Got exception outside of a @test startproc must be called before process Stacktrace: [1] error(s::String) @ Base ./error.jl:56 [2] process(codec::CodecZlib.ZlibDecompressor, input::TranscodingStreams.Memory, output::TranscodingStreams.Memory, error_ref::TranscodingStreams.Error) @ CodecZlib ~/.julia/packages/CodecZlib/lEc2s/src/decompression.jl:186 [3] decompress(io::IOStream, v::Variant, h::BGEN.Header; decompressed::Nothing) @ BGEN ~/.julia/packages/BGEN/dfgRU/src/genotypes.jl:72 [4] decompress @ ~/.julia/packages/BGEN/dfgRU/src/genotypes.jl:42 [inlined] [5] first_allele_dosage!(b::Bgen, v::Variant; T::Type, mean_impute::Bool, clear_decompressed::Bool, data::Nothing, decompressed::Nothing, is_decompressed::Bool) @ BGEN ~/.julia/packages/BGEN/dfgRU/src/genotypes.jl:571 [6] first_allele_dosage! @ ~/.julia/packages/BGEN/dfgRU/src/genotypes.jl:549 [inlined] [7] convert_gt(t::Type{Float64}, b::Bgen) @ MendelImpute ~/.julia/packages/MendelImpute/z2M6N/src/read.jl:38 [8] macro expansion @ ./timing.jl:739 [inlined] [9] macro expansion @ ~/.julia/packages/MendelImpute/z2M6N/test/runtests.jl:318 [inlined] [10] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2244 [inlined] [11] top-level scope @ ~/.julia/packages/MendelImpute/z2M6N/test/runtests.jl:318 [12] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [13] top-level scope @ none:6 [14] eval(m::Module, e::Any) @ Core ./boot.jl:489 [15] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [16] _start() @ Base ./client.jl:585 Test Summary: | Error Total Time import BGEN | 1 1 1.4s RNG of the outermost testset: Xoshiro(0x2528e1308607e0ae, 0x12b13b57b4a0b047, 0x383337fe4c294853, 0x5dd79dfdcd293138, 0x0721fd1fbcd8b3aa) ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/MendelImpute/z2M6N/test/runtests.jl:316 Testing failed after 364.45s ERROR: LoadError: Package MendelImpute errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3138 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3003 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:586 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:562 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:585 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 534.0s: package tests unexpectedly errored