Package evaluation to test SBML on Julia 1.14.0-DEV.1640 (5532bea546*) started at 2026-01-30T06:55:06.832


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...
  Activating project at `~/.julia/environments/v1.14`

Set-up completed after 10.24s


################################################################################
# Installation
#

Installing SBML...
   Resolving package versions...
    Updating `~/.julia/environments/v1.14/Project.toml`
  [e5567a89] + SBML v1.6.0
    Updating `~/.julia/environments/v1.14/Manifest.toml`
  [ffbed154] + DocStringExtensions v0.9.5
  [615f187c] + IfElse v0.1.1
  [692b3bcd] + JLLWrappers v1.7.1
  [21216c6a] + Preferences v1.5.1
  [e5567a89] + SBML v1.6.0
  [1986cc42] + Unitful v1.28.0
  [94ce4f54] + Libiconv_jll v1.18.0+0
  [bb12108a] + SBML_jll v5.21.0+0
⌅ [02c8fc9c] + XML2_jll v2.13.9+0
  [56f22d72] + Artifacts v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v1.0.0
  [9e88b42a] + Serialization v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [fa267f1f] + TOML v1.0.3
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [4536629a] + OpenBLAS_jll v0.3.30+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [83775a58] + Zlib_jll v1.3.1+2
  [8e850b90] + libblastrampoline_jll v5.15.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 4.92s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...
Precompiling packages...
   1664.5 ms  ✓ ConstructionBase
   1309.6 ms  ✓ LambertW
   5189.3 ms  ✓ StatsBase
   7267.5 ms  ✓ MultivariatePolynomials
   1485.9 ms  ✓ SBML_jll
   2819.2 ms  ✓ Unitful → ForwardDiffExt
   1404.5 ms  ✓ PreallocationTools → PreallocationToolsForwardDiffExt
   1215.6 ms  ✓ Unityper
    800.7 ms  ✓ ConstructionBase → ConstructionBaseIntervalSetsExt
   3013.0 ms  ✓ Setfield
   1449.3 ms  ✓ ConstructionBase → ConstructionBaseStaticArraysExt
   5173.0 ms  ✓ Accessors
    790.5 ms  ✓ ADTypes → ADTypesConstructionBaseExt
   1840.5 ms  ✓ Unitful → ConstructionBaseUnitfulExt
   1968.5 ms  ✓ PDMats → StatsBaseExt
   4602.1 ms  ✓ DynamicPolynomials
  18096.3 ms  ✓ SBML
   1746.7 ms  ✓ Accessors → StaticArraysExt
   1704.2 ms  ✓ Accessors → TestExt
   2567.3 ms  ✓ Accessors → IntervalSetsExt
   2758.4 ms  ✓ Accessors → LinearAlgebraExt
   2040.2 ms  ✓ Accessors → UnitfulExt
  10141.6 ms  ✓ Distributions
   4902.6 ms  ✓ SciMLOperators
   3821.3 ms  ✓ SymbolicIndexingInterface
   3898.3 ms  ✓ Distributions → DistributionsTestExt
   3644.3 ms  ✓ Distributions → DistributionsChainRulesCoreExt
   1021.2 ms  ✓ SciMLOperators → SciMLOperatorsStaticArraysCoreExt
   1670.9 ms  ✓ SciMLOperators → SciMLOperatorsSparseArraysExt
   7917.9 ms  ✓ RecursiveArrayTools
   1891.1 ms  ✓ RecursiveArrayTools → RecursiveArrayToolsSparseArraysExt
   1320.2 ms  ✓ RecursiveArrayTools → RecursiveArrayToolsStatisticsExt
   1615.9 ms  ✓ RecursiveArrayTools → RecursiveArrayToolsForwardDiffExt
  31075.6 ms  ✓ SciMLBase
   6358.5 ms  ✓ LabelledArrays
   3260.1 ms  ✓ SciMLBase → SciMLBaseChainRulesCoreExt
   4063.3 ms  ✓ SciMLBase → SciMLBaseForwardDiffExt
   4722.9 ms  ✓ SciMLBase → SciMLBaseDistributionsExt
  35994.9 ms  ✓ SymbolicUtils
   7006.5 ms  ✓ SymbolicLimits
  41450.1 ms  ✓ Symbolics
ERROR: LoadError: UndefVarError: `ForwardDiff` not defined in `PreallocationTools`
Suggestion: check for spelling errors or missing imports.
Hint: ForwardDiff is loaded but not imported in the active module Main.
Stacktrace:
  [1] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:62
  [2] _eval_using
    @ ./module.jl:137 [inlined]
  [3] _eval_using(to::Module, path::Expr)
    @ Base ./module.jl:137
  [4] top-level scope
    @ ~/.julia/packages/Symbolics/qKoME/ext/SymbolicsPreallocationToolsExt.jl:5
  [5] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
  [6] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3309
  [7] top-level scope
    @ stdin:5
  [8] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
  [9] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:3151
 [10] include_string
    @ ./loading.jl:3161 [inlined]
 [11] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:342
 [12] _start()
    @ Base ./client.jl:585
in expression starting at /home/pkgeval/.julia/packages/Symbolics/qKoME/ext/SymbolicsPreallocationToolsExt.jl:1
in expression starting at stdin:5
              ✗ Symbolics → SymbolicsPreallocationToolsExt
  41 dependencies successfully precompiled in 261 seconds. 147 already precompiled.

Precompilation completed after 278.84s


################################################################################
# Testing
#

     Testing SBML
      Status `/tmp/jl_MtWRbE/Project.toml`
⌅ [187b0558] ConstructionBase v1.5.6
  [ffbed154] DocStringExtensions v0.9.5
  [615f187c] IfElse v0.1.1
  [e5567a89] SBML v1.6.0
⌅ [0c5d862f] Symbolics v5.36.0
  [1986cc42] Unitful v1.28.0
  [bb12108a] SBML_jll v5.21.0+0
  [f43a241f] Downloads v1.7.0
  [8f399da3] Libdl v1.11.0
  [ea8e919c] SHA v1.0.0
  [2f01184e] SparseArrays v1.13.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_MtWRbE/Manifest.toml`
  [47edcb42] ADTypes v1.21.0
  [1520ce14] AbstractTrees v0.4.5
  [7d9f7c33] Accessors v0.1.43
  [79e6a3ab] Adapt v4.4.0
  [66dad0bd] AliasTables v1.1.3
  [4fba245c] ArrayInterface v7.22.0
⌅ [e2ed5e7c] Bijections v0.1.10
  [d360d2e6] ChainRulesCore v1.26.0
  [861a8166] Combinatorics v1.1.0
  [38540f10] CommonSolve v0.2.6
  [bbf7d656] CommonSubexpressions v0.3.1
  [f70d9fcc] CommonWorldInvalidations v1.0.0
  [34da2185] Compat v4.18.1
  [b152e2b5] CompositeTypes v0.1.4
  [a33af91c] CompositionsBase v0.1.2
⌅ [187b0558] ConstructionBase v1.5.6
  [9a962f9c] DataAPI v1.16.0
⌅ [864edb3b] DataStructures v0.18.22
  [163ba53b] DiffResults v1.1.0
  [b552c78f] DiffRules v1.15.1
  [31c24e10] Distributions v0.25.123
  [ffbed154] DocStringExtensions v0.9.5
  [5b8099bc] DomainSets v0.7.16
⌅ [7c1d4256] DynamicPolynomials v0.5.7
  [4e289a0a] EnumX v1.0.6
  [e2ba6199] ExprTools v0.1.10
  [55351af7] ExproniconLite v0.10.14
  [1a297f60] FillArrays v1.16.0
  [1fa38f19] Format v1.3.7
⌅ [f6369f11] ForwardDiff v0.10.39
  [069b7b12] FunctionWrappers v1.1.3
  [77dc65aa] FunctionWrappersWrappers v0.1.3
  [46192b85] GPUArraysCore v0.2.0
  [34004b35] HypergeometricFunctions v0.3.28
  [615f187c] IfElse v0.1.1
  [8197267c] IntervalSets v0.7.13
  [3587e190] InverseFunctions v0.1.17
  [92d709cd] IrrationalConstants v0.2.6
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.7.1
  [ae98c720] Jieko v0.2.1
  [b964fa9f] LaTeXStrings v1.4.0
  [2ee39098] LabelledArrays v1.18.0
⌅ [984bce1d] LambertW v0.4.6
  [23fbe1c1] Latexify v0.16.10
  [2ab3a3ac] LogExpFunctions v0.3.29
  [e6f89c97] LoggingExtras v1.2.0
  [1914dd2f] MacroTools v0.5.16
  [e1d29d7a] Missings v1.2.0
  [2e0e35c7] Moshi v0.3.7
⌃ [102ac46a] MultivariatePolynomials v0.5.9
  [d8a4904e] MutableArithmetics v1.6.7
  [77ba4419] NaNMath v1.1.3
  [bac558e1] OrderedCollections v1.8.1
  [90014a1f] PDMats v0.11.37
⌃ [d236fae5] PreallocationTools v0.4.34
  [aea7be01] PrecompileTools v1.3.3
  [21216c6a] Preferences v1.5.1
  [43287f4e] PtrArrays v1.3.0
  [1fd47b50] QuadGK v2.11.2
  [3cdcf5f2] RecipesBase v1.3.4
  [731186ca] RecursiveArrayTools v3.47.0
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [79098fc4] Rmath v0.9.0
  [7e49a35a] RuntimeGeneratedFunctions v0.5.16
  [e5567a89] SBML v1.6.0
  [0bca4576] SciMLBase v2.136.0
  [a6db7da4] SciMLLogging v1.8.0
  [c0aeaf25] SciMLOperators v1.14.1
  [431bcebd] SciMLPublic v1.0.1
  [53ae85a6] SciMLStructures v1.10.0
  [efcf1570] Setfield v1.1.2
  [a2af1166] SortingAlgorithms v1.2.2
  [276daf66] SpecialFunctions v2.6.1
  [90137ffa] StaticArrays v1.9.16
  [1e83bf80] StaticArraysCore v1.4.4
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.8.0
  [2913bbd2] StatsBase v0.34.10
  [4c63d2b9] StatsFuns v1.5.2
  [2efcf032] SymbolicIndexingInterface v0.3.46
⌅ [19f23fe9] SymbolicLimits v0.2.1
⌅ [d1185830] SymbolicUtils v2.1.3
⌅ [0c5d862f] Symbolics v5.36.0
⌅ [8ea1fca8] TermInterface v0.4.1
  [a759f4b9] TimerOutputs v0.5.29
  [1986cc42] Unitful v1.28.0
  [a7c27f48] Unityper v0.1.6
  [61579ee1] Ghostscript_jll v9.55.1+0
  [aacddb02] JpegTurbo_jll v3.1.4+0
  [94ce4f54] Libiconv_jll v1.18.0+0
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [f50d1b31] Rmath_jll v0.5.1+0
  [bb12108a] SBML_jll v5.21.0+0
⌅ [02c8fc9c] XML2_jll v2.13.9+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [f43a241f] Downloads v1.7.0
  [7b1f6079] FileWatching v1.11.0
  [9fa8497b] Future v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0
  [b27032c2] LibCURL v1.0.0
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.13.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [44cfe95a] Pkg v1.14.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v1.0.0
  [9e88b42a] Serialization v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [f489334b] StyledStrings v1.13.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] LibCURL_jll v8.18.0+0
  [e37daf67] LibGit2_jll v1.9.2+0
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2025.12.2
  [4536629a] OpenBLAS_jll v0.3.30+0
  [05823500] OpenLibm_jll v0.8.7+0
  [458c3c95] OpenSSL_jll v3.5.4+0
  [efcefdf7] PCRE2_jll v10.47.0+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [83775a58] Zlib_jll v1.3.1+2
  [3161d3a3] Zstd_jll v1.5.7+1
  [8e850b90] libblastrampoline_jll v5.15.0+0
  [8e850ede] nghttp2_jll v1.68.0+1
  [3f19e933] p7zip_jll v17.7.0+0
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading.
     Testing Running tests...
ERROR: LoadError: UndefVarError: `ForwardDiff` not defined in `PreallocationTools`
Suggestion: check for spelling errors or missing imports.
Hint: ForwardDiff is loaded but not imported in the active module Main.
Stacktrace:
  [1] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:62
  [2] _eval_using
    @ ./module.jl:137 [inlined]
  [3] _eval_using(to::Module, path::Expr)
    @ Base ./module.jl:137
  [4] top-level scope
    @ ~/.julia/packages/Symbolics/qKoME/ext/SymbolicsPreallocationToolsExt.jl:5
  [5] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
  [6] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3309
  [7] top-level scope
    @ stdin:5
  [8] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
  [9] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:3151
 [10] include_string
    @ ./loading.jl:3161 [inlined]
 [11] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:342
 [12] _start()
    @ Base ./client.jl:585
in expression starting at /home/pkgeval/.julia/packages/Symbolics/qKoME/ext/SymbolicsPreallocationToolsExt.jl:1
in expression starting at stdin:5

  1 dependency had output during precompilation:
┌ Symbolics → SymbolicsPreallocationToolsExt
│  [Output was shown above]
└  
┌ Error: Error during loading of extension SymbolicsPreallocationToolsExt of Symbolics, use `Base.retry_load_extensions()` to retry.
│   exception =
│    1-element ExceptionStack:
│    The following 1 package failed to precompile:
│    
│    Symbolics → SymbolicsPreallocationToolsExt 
│    Failed to precompile SymbolicsPreallocationToolsExt [cf6f9317-8bac-542e-bce0-9dbc7ae7d397] to "/home/pkgeval/.julia/compiled/v1.14/SymbolicsPreallocationToolsExt/jl_K4hsTP" (ProcessExited(1)).
│    
└ @ Base loading.jl:1774

SBML flux model loading: Test Failed at /home/pkgeval/.julia/packages/SBML/mJIpc/test/ecoli_flux.jl:46
  Expression: mets[10:12] == ["M_akg_e", "M_fum_c", "M_pyr_c"]
   Evaluated: ["M_xu5p_D_c", "M_h2o_b", "M_amp_c"] == ["M_akg_e", "M_fum_c", "M_pyr_c"]
  Stacktrace:
   [1] top-level scope
     @ ~/.julia/packages/SBML/mJIpc/test/ecoli_flux.jl:17
   [2] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2244 [inlined]
   [3] macro expansion
     @ ~/.julia/packages/SBML/mJIpc/test/ecoli_flux.jl:46 [inlined]
   [4] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:782 [inlined]

SBML flux model loading: Test Failed at /home/pkgeval/.julia/packages/SBML/mJIpc/test/ecoli_flux.jl:47
  Expression: rxns[10:12] == ["R_H2Ot", "R_PGL", "R_EX_glc_e_"]
   Evaluated: ["R_FBA", "R_FORt", "R_EX_for_e_"] == ["R_H2Ot", "R_PGL", "R_EX_glc_e_"]
  Stacktrace:
   [1] top-level scope
     @ ~/.julia/packages/SBML/mJIpc/test/ecoli_flux.jl:17
   [2] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2244 [inlined]
   [3] macro expansion
     @ ~/.julia/packages/SBML/mJIpc/test/ecoli_flux.jl:47 [inlined]
   [4] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:782 [inlined]

SBML flux model loading: Test Failed at /home/pkgeval/.julia/packages/SBML/mJIpc/test/ecoli_flux.jl:53
  Expression: ocs[40] == 1.0
   Evaluated: 0.0 == 1.0
  Stacktrace:
   [1] top-level scope
     @ ~/.julia/packages/SBML/mJIpc/test/ecoli_flux.jl:17
   [2] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2244 [inlined]
   [3] macro expansion
     @ ~/.julia/packages/SBML/mJIpc/test/ecoli_flux.jl:53 [inlined]
   [4] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:782 [inlined]

SBML flux model loading: Test Failed at /home/pkgeval/.julia/packages/SBML/mJIpc/test/ecoli_flux.jl:55
  Expression: all(ocs .== 0.0)
   Evaluated: all(Bool[1, 1, 1, 1, 1, 1, 1, 1, 1, 1  …  1, 1, 1, 1, 1, 1, 1, 1, 1, 1])
  Stacktrace:
   [1] top-level scope
     @ ~/.julia/packages/SBML/mJIpc/test/ecoli_flux.jl:17
   [2] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2244 [inlined]
   [3] macro expansion
     @ ~/.julia/packages/SBML/mJIpc/test/ecoli_flux.jl:55 [inlined]
   [4] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:782 [inlined]

SBML flux model loading: Test Failed at /home/pkgeval/.julia/packages/SBML/mJIpc/test/ecoli_flux.jl:66
  Expression: isapprox(lvals[27], uvals[27])
   Evaluated: isapprox(-999999.0, 999999.0)
  Stacktrace:
   [1] top-level scope
     @ ~/.julia/packages/SBML/mJIpc/test/ecoli_flux.jl:17
   [2] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2244 [inlined]
   [3] macro expansion
     @ ~/.julia/packages/SBML/mJIpc/test/ecoli_flux.jl:66 [inlined]
   [4] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:782 [inlined]

SBML flux model loading: Test Failed at /home/pkgeval/.julia/packages/SBML/mJIpc/test/ecoli_flux.jl:67
  Expression: isapprox(lvals[27], 7.6)
   Evaluated: isapprox(-999999.0, 7.6)
  Stacktrace:
   [1] top-level scope
     @ ~/.julia/packages/SBML/mJIpc/test/ecoli_flux.jl:17
   [2] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2244 [inlined]
   [3] macro expansion
     @ ~/.julia/packages/SBML/mJIpc/test/ecoli_flux.jl:67 [inlined]
   [4] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:782 [inlined]

SBML flux model loading: Test Failed at /home/pkgeval/.julia/packages/SBML/mJIpc/test/ecoli_flux.jl:68
  Expression: isapprox(lvals[12], -10)
   Evaluated: isapprox(0.0, -10)
  Stacktrace:
   [1] top-level scope
     @ ~/.julia/packages/SBML/mJIpc/test/ecoli_flux.jl:17
   [2] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2244 [inlined]
   [3] macro expansion
     @ ~/.julia/packages/SBML/mJIpc/test/ecoli_flux.jl:68 [inlined]
   [4] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:782 [inlined]
┌ Warning: The downloaded model `/home/pkgeval/.julia/packages/SBML/mJIpc/test/data/00489-sbml-l3v2.xml' seems to be different from the expected one. Tests will likely fail.
│   cksum = "2613c8e3fe67dc9226c6ed38acf5cc6dd3480d80ed9351c7c78ac97e981c860f"
└ @ Main ~/.julia/packages/SBML/mJIpc/test/loadmodels.jl:186
┌ Warning: The downloaded model `/home/pkgeval/.julia/packages/SBML/mJIpc/test/data/00489-sbml-l3v2.xml' seems to be different from the expected one. Tests will likely fail.
│   cksum = "2613c8e3fe67dc9226c6ed38acf5cc6dd3480d80ed9351c7c78ac97e981c860f"
└ @ Main ~/.julia/packages/SBML/mJIpc/test/loadmodels.jl:186

Model Dasgupta2020.xml writes out as expected: Test Failed at /home/pkgeval/.julia/packages/SBML/mJIpc/test/writemodels.jl:48
  Expression: #= /home/pkgeval/.julia/packages/SBML/mJIpc/test/writemodels.jl:48 =# @test_logs(writeSBML(model)) == expected
   Evaluated: "<?xml version=\"1.0\" encoding=\"UTF-8\"?>\n<sbml xmlns=\"http://www.sbml.org/sbml/level3/version2/core\" level=\"3\" version=\"2\">\n  <model metaid=\"COPASI0\" id=\"Dasgupta2020___Reduced_model_of_receptor_clusturing_and_aggregation\" name=\"Dasgupta2020 - Reduced model of receptor clusturing and aggregation\">\n    <notes>\n      <body xmlns=\"http://www.w3.org/1999/xhtml\">\n        <p>a simple kinetic mass-action-law-based model could be utilized to adequately describe clustering in\nresponse to activation both in 2D and in 3D</p>\n      </body>\n    </notes>\n    <annotation>\n      <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n        <rdf:RDF xmlns:CopasiMT=\"http://www.copasi.org/RDF/MiriamTerms#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\">\n          <rdf:Description rdf:about=\"#COPASI0\">\n            <bqbiol:hasProperty rdf:resource=\"urn:miriam:go:GO:0007596\"/>\n            <bqbiol:hasProperty rdf:resource=\"urn:miriam:go:GO:0070527\"/>\n            <bqbiol:hasProperty rdf:resource=\"urn:miriam:mamo:MAMO_0000046\"/>\n            <bqbiol:hasTaxon rdf:resource=\"urn:miriam:taxonomy:9606\"/>\n            <dcterms:bibliographicCitation>\n              <rdf:Description>\n                <CopasiMT:isDescribedBy rdf:resource=\"urn:miriam:pubmed:32604803\"/>\n              </rdf:Description>\n            </dcterms:bibliographicCitation>\n            <dcterms:created>\n              <rdf:Description>\n                <dcterms:W3CDTF>2020-10-30T15:25:02Z</dcterms:W3CDTF>\n              </rdf:Description>\n            </dcterms:created>\n            <dcterms:creator>\n              <rdf:Description>\n                <vCard:EMAIL>tiwarik@babraham.ac.uk</vCard:EMAIL>\n                <vCard:N>\n                  <rdf:Description>\n                    <vCard:Family>Tiwari</vCard:Family>\n                    <vCard:Given>Krishna</vCard:Given>\n                  </rdf:Description>\n                </vCard:N>\n                <vCard:ORG>\n                  <rdf:Description>\n                    <vCard:Orgname>Babraham Institute</vCard:Orgname>\n                  </rdf:Description>\n                </vCard:ORG>\n              </rdf:Description>\n            </dcterms:creator>\n            <CopasiMT:occursIn rdf:resource=\"urn:miriam:ncit:C77681\"/>\n          </rdf:Description>\n        </rdf:RDF>\n      </COPASI>\n      <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n        <rdf:Description rdf:about=\"#COPASI0\">\n          <dcterms:creator>\n            <rdf:Bag>\n              <rdf:li rdf:parseType=\"Resource\">\n                <vCard4:hasName rdf:parseType=\"Resource\">\n                  <vCard4:family-name>Tiwari</vCard4:family-name>\n                  <vCard4:given-name>Krishna</vCard4:given-name>\n                </vCard4:hasName>\n                <vCard4:hasEmail>tiwarik@babraham.ac.uk</vCard4:hasEmail>\n                <vCard4:organization-name>Babraham Institute</vCard4:organization-name>\n              </rdf:li>\n            </rdf:Bag>\n          </dcterms:creator>\n          <dcterms:created rdf:parseType=\"Resource\">\n            <dcterms:W3CDTF>2020-10-30T15:25:02Z</dcterms:W3CDTF>\n          </dcterms:created>\n          <dcterms:modified rdf:parseType=\"Resource\">\n            <dcterms:W3CDTF>2020-10-30T15:25:02Z</dcterms:W3CDTF>\n          </dcterms:modified>\n          <bqmodel:isDescribedBy>\n            <rdf:Bag>\n              <rdf:li rdf:resource=\"http://identifiers.org/pubmed/32604803\"/>\n            </rdf:Bag>\n          </bqmodel:isDescribedBy>\n          <bqbiol:occursIn>\n            <rdf:Bag>\n              <rdf:li rdf:resource=\"http://identifiers.org/ncit/C77681\"/>\n            </rdf:Bag>\n          </bqbiol:occursIn>\n          <bqbiol:hasTaxon>\n            <rdf:Bag>\n              <rdf:li rdf:resource=\"http://identifiers.org/taxonomy/9606\"/>\n            </rdf:Bag>\n          </bqbiol:hasTaxon>\n          <bqbiol:hasProperty>\n            <rdf:Bag>\n              <rdf:li rdf:resource=\"http://identifiers.org/go/GO:0007596\"/>\n              <rdf:li rdf:resource=\"http://identifiers.org/go/GO:0070527\"/>\n              <rdf:li rdf:resource=\"http://identifiers.org/mamo/MAMO_0000046\"/>\n            </rdf:Bag>\n          </bqbiol:hasProperty>\n          <bqmodel:is>\n            <rdf:Bag>\n              <rdf:li rdf:resource=\"http://identifiers.org/biomodels.db/MODEL2011030002\"/>\n              <rdf:li rdf:resource=\"http://identifiers.org/biomodels.db/BIOMD0000000973\"/>\n            </rdf:Bag>\n          </bqmodel:is>\n        </rdf:Description>\n      </rdf:RDF>\n    </annotation>\n    <listOfFunctionDefinitions>\n      <functionDefinition metaid=\"COPASI18\" id=\"R3_flux\" name=\"R3_flux\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI18\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:44:41Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <lambda>\n            <bvar>\n              <ci> k_1 </ci>\n            </bvar>\n            <bvar>\n              <ci> n </ci>\n            </bvar>\n            <apply>\n              <times/>\n              <ci> k_1 </ci>\n              <ci> n </ci>\n            </apply>\n          </lambda>\n        </math>\n      </functionDefinition>\n      <functionDefinition metaid=\"COPASI19\" id=\"R4_flux\" name=\"R4_flux\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI19\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:44:41Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <lambda>\n            <bvar>\n              <ci> k2 </ci>\n            </bvar>\n            <bvar>\n              <ci> p </ci>\n            </bvar>\n            <apply>\n              <times/>\n              <ci> k2 </ci>\n              <apply>\n                <power/>\n                <ci> p </ci>\n                <cn> 2 </cn>\n              </apply>\n            </apply>\n          </lambda>\n        </math>\n      </functionDefinition>\n      <functionDefinition metaid=\"COPASI17\" id=\"R2_flux\" name=\"R2_flux\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI17\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:44:40Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <lambda>\n            <bvar>\n              <ci> k2 </ci>\n            </bvar>\n            <bvar>\n              <ci> p </ci>\n            </bvar>\n            <apply>\n              <times/>\n              <cn> 2 </cn>\n              <ci> k2 </ci>\n              <apply>\n                <power/>\n                <ci> p </ci>\n                <cn> 2 </cn>\n              </apply>\n            </apply>\n          </lambda>\n        </math>\n      </functionDefinition>\n      <functionDefinition metaid=\"COPASI21\" id=\"R1_flux\" name=\"R1_flux\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI21\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:44:39Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <lambda>\n            <bvar>\n              <ci> k1 </ci>\n            </bvar>\n            <bvar>\n              <ci> n </ci>\n            </bvar>\n            <bvar>\n              <ci> p </ci>\n            </bvar>\n            <apply>\n              <times/>\n              <ci> k1 </ci>\n              <ci> n </ci>\n              <ci> p </ci>\n            </apply>\n          </lambda>\n        </math>\n      </functionDefinition>\n      <functionDefinition metaid=\"COPASI20\" id=\"R5_flux\" name=\"R5_flux\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI20\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:44:42Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <lambda>\n            <bvar>\n              <ci> k_2 </ci>\n            </bvar>\n            <bvar>\n              <ci> n </ci>\n            </bvar>\n            <apply>\n              <times/>\n              <ci> k_2 </ci>\n              <apply>\n                <power/>\n                <ci> n </ci>\n                <cn> 2 </cn>\n              </apply>\n            </apply>\n          </lambda>\n        </math>\n      </functionDefinition>\n    </listOfFunctionDefinitions>\n    <listOfUnitDefinitions>\n      <unitDefinition id=\"length\" name=\"length\">\n        <listOfUnits>\n          <unit kind=\"metre\" exponent=\"1\" scale=\"0\" multiplier=\"1\"/>\n        </listOfUnits>\n      </unitDefinition>\n      <unitDefinition id=\"substance\" name=\"substance\">\n        <listOfUnits>\n          <unit kind=\"mole\" exponent=\"1\" scale=\"0\" multiplier=\"1\"/>\n        </listOfUnits>\n      </unitDefinition>\n      <unitDefinition id=\"time\" name=\"time\">\n        <listOfUnits>\n          <unit kind=\"second\" exponent=\"1\" scale=\"0\" multiplier=\"1\"/>\n        </listOfUnits>\n      </unitDefinition>\n      <unitDefinition id=\"volume\" name=\"volume\">\n        <listOfUnits>\n          <unit kind=\"litre\" exponent=\"1\" scale=\"0\" multiplier=\"1\"/>\n        </listOfUnits>\n      </unitDefinition>\n      <unitDefinition id=\"area\" name=\"area\">\n        <listOfUnits>\n          <unit kind=\"metre\" exponent=\"2\" scale=\"0\" multiplier=\"1\"/>\n        </listOfUnits>\n      </unitDefinition>\n    </listOfUnitDefinitions>\n    <listOfCompartments>\n      <compartment metaid=\"COPASI1\" id=\"Cell\" name=\"Cell\" spatialDimensions=\"3\" size=\"1\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI1\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:29:06Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </compartment>\n    </listOfCompartments>\n    <listOfSpecies>\n      <species metaid=\"COPASI3\" id=\"N\" name=\"N\" compartment=\"Cell\" initialConcentration=\"0\" hasOnlySubstanceUnits=\"false\" boundaryCondition=\"false\" constant=\"false\">\n        <notes>\n          <body xmlns=\"http://www.w3.org/1999/xhtml\">\n            <pre>Concentration of receptor aggregate</pre>\n          </body>\n        </notes>\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:CopasiMT=\"http://www.copasi.org/RDF/MiriamTerms#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI3\">\n                <bqbiol:hasProperty rdf:resource=\"urn:miriam:ncit:C18106\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:32:16Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n                <CopasiMT:isVersionOf rdf:resource=\"urn:miriam:ncit:C62344\"/>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI3\">\n              <bqbiol:isVersionOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C62344\"/>\n                </rdf:Bag>\n              </bqbiol:isVersionOf>\n              <bqbiol:hasProperty>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C18106\"/>\n                </rdf:Bag>\n              </bqbiol:hasProperty>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n      </species>\n      <species metaid=\"COPASI2\" id=\"P\" name=\"P\" compartment=\"Cell\" initialConcentration=\"10000\" hasOnlySubstanceUnits=\"false\" boundaryCondition=\"false\" constant=\"false\">\n        <notes>\n          <body xmlns=\"http://www.w3.org/1999/xhtml\">\n            <pre>Concentration of single receptor/particle</pre>\n          </body>\n        </notes>\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:CopasiMT=\"http://www.copasi.org/RDF/MiriamTerms#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI2\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:31:05Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n                <CopasiMT:isVersionOf rdf:resource=\"urn:miriam:ncit:C18106\"/>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI2\">\n              <bqbiol:isVersionOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C18106\"/>\n                </rdf:Bag>\n              </bqbiol:isVersionOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n      </species>\n    </listOfSpecies>\n    <listOfParameters>\n      <parameter metaid=\"COPASI9\" id=\"s\" name=\"s\" constant=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI9\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:33:36Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter id=\"ModelValue_6\" name=\"Initial for p0\" value=\"10000\" constant=\"true\">\n        <annotation>\n          <initialValue xmlns=\"http://copasi.org/initialValue\" parent=\"p0\"/>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI10\" id=\"p0\" name=\"p0\" value=\"10000\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI10\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:33:48Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI4\" id=\"k1\" name=\"k1\" value=\"0.00021\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI4\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:32:40Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI8\" id=\"k3\" name=\"k3\" value=\"1.16\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI8\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:33:19Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI5\" id=\"k2\" name=\"k2\" value=\"7.5e-06\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI5\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:32:44Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI6\" id=\"k_1\" name=\"k_1\" value=\"6.6e-09\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI6\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:32:52Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI7\" id=\"k_2\" name=\"k_2\" value=\"0.03\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI7\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:33:17Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n    </listOfParameters>\n    <listOfInitialAssignments>\n      <initialAssignment symbol=\"ModelValue_6\">\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <ci> p0 </ci>\n        </math>\n      </initialAssignment>\n    </listOfInitialAssignments>\n    <listOfRules>\n      <assignmentRule variable=\"s\">\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <apply>\n            <divide/>\n            <apply>\n              <minus/>\n              <ci> ModelValue_6 </ci>\n              <ci> P </ci>\n            </apply>\n            <ci> N </ci>\n          </apply>\n        </math>\n      </assignmentRule>\n    </listOfRules>\n    <listOfReactions>\n      <reaction metaid=\"COPASI14\" id=\"R4\" name=\"R4\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI14\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:ncit:C62344\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:30:19Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI14\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C62344\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfProducts>\n          <speciesReference species=\"N\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfProducts>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <apply>\n                <ci> R4_flux </ci>\n                <ci> k2 </ci>\n                <ci> P </ci>\n              </apply>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n      <reaction metaid=\"COPASI15\" id=\"R5\" name=\"R5\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI15\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:sbo:SBO:0000180\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:30:23Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI15\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/sbo/SBO:0000180\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfReactants>\n          <speciesReference species=\"N\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfReactants>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <apply>\n                <ci> R5_flux </ci>\n                <ci> k_2 </ci>\n                <ci> N </ci>\n              </apply>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n      <reaction metaid=\"COPASI13\" id=\"R3\" name=\"R3\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI13\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:sbo:SBO:0000180\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:30:13Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI13\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/sbo/SBO:0000180\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfProducts>\n          <speciesReference species=\"P\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfProducts>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <apply>\n                <ci> R3_flux </ci>\n                <ci> k_1 </ci>\n                <ci> N </ci>\n              </apply>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n      <reaction metaid=\"COPASI16\" id=\"R6\" name=\"R6\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI16\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:ncit:C62344\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:30:27Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI16\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C62344\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfReactants>\n          <speciesReference species=\"N\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfReactants>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <ci> k3 </ci>\n              <ci> N </ci>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n      <reaction metaid=\"COPASI11\" id=\"R1\" name=\"R1\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI11\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:ncit:C61470\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:29:18Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI11\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C61470\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfReactants>\n          <speciesReference species=\"P\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfReactants>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <apply>\n                <ci> R1_flux </ci>\n                <ci> k1 </ci>\n                <ci> N </ci>\n                <ci> P </ci>\n              </apply>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n      <reaction metaid=\"COPASI12\" id=\"R2\" name=\"R2\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI12\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:ncit:C62344\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:29:21Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI12\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C62344\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfReactants>\n          <speciesReference species=\"P\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfReactants>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <apply>\n                <ci> R2_flux </ci>\n                <ci> k2 </ci>\n                <ci> P </ci>\n              </apply>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n    </listOfReactions>\n  </model>\n</sbml>\n" == "<?xml version=\"1.0\" encoding=\"UTF-8\"?>\n<sbml xmlns=\"http://www.sbml.org/sbml/level3/version2/core\" level=\"3\" version=\"2\">\n  <model metaid=\"COPASI0\" id=\"Dasgupta2020___Reduced_model_of_receptor_clusturing_and_aggregation\" name=\"Dasgupta2020 - Reduced model of receptor clusturing and aggregation\">\n    <notes>\n      <body xmlns=\"http://www.w3.org/1999/xhtml\">\n        <p>a simple kinetic mass-action-law-based model could be utilized to adequately describe clustering in\nresponse to activation both in 2D and in 3D</p>\n      </body>\n    </notes>\n    <annotation>\n      <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n        <rdf:RDF xmlns:CopasiMT=\"http://www.copasi.org/RDF/MiriamTerms#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\">\n          <rdf:Description rdf:about=\"#COPASI0\">\n            <bqbiol:hasProperty rdf:resource=\"urn:miriam:go:GO:0007596\"/>\n            <bqbiol:hasProperty rdf:resource=\"urn:miriam:go:GO:0070527\"/>\n            <bqbiol:hasProperty rdf:resource=\"urn:miriam:mamo:MAMO_0000046\"/>\n            <bqbiol:hasTaxon rdf:resource=\"urn:miriam:taxonomy:9606\"/>\n            <dcterms:bibliographicCitation>\n              <rdf:Description>\n                <CopasiMT:isDescribedBy rdf:resource=\"urn:miriam:pubmed:32604803\"/>\n              </rdf:Description>\n            </dcterms:bibliographicCitation>\n            <dcterms:created>\n              <rdf:Description>\n                <dcterms:W3CDTF>2020-10-30T15:25:02Z</dcterms:W3CDTF>\n              </rdf:Description>\n            </dcterms:created>\n            <dcterms:creator>\n              <rdf:Description>\n                <vCard:EMAIL>tiwarik@babraham.ac.uk</vCard:EMAIL>\n                <vCard:N>\n                  <rdf:Description>\n                    <vCard:Family>Tiwari</vCard:Family>\n                    <vCard:Given>Krishna</vCard:Given>\n                  </rdf:Description>\n                </vCard:N>\n                <vCard:ORG>\n                  <rdf:Description>\n                    <vCard:Orgname>Babraham Institute</vCard:Orgname>\n                  </rdf:Description>\n                </vCard:ORG>\n              </rdf:Description>\n            </dcterms:creator>\n            <CopasiMT:occursIn rdf:resource=\"urn:miriam:ncit:C77681\"/>\n          </rdf:Description>\n        </rdf:RDF>\n      </COPASI>\n      <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n        <rdf:Description rdf:about=\"#COPASI0\">\n          <dcterms:creator>\n            <rdf:Bag>\n              <rdf:li rdf:parseType=\"Resource\">\n                <vCard4:hasName rdf:parseType=\"Resource\">\n                  <vCard4:family-name>Tiwari</vCard4:family-name>\n                  <vCard4:given-name>Krishna</vCard4:given-name>\n                </vCard4:hasName>\n                <vCard4:hasEmail>tiwarik@babraham.ac.uk</vCard4:hasEmail>\n                <vCard4:organization-name>Babraham Institute</vCard4:organization-name>\n              </rdf:li>\n            </rdf:Bag>\n          </dcterms:creator>\n          <dcterms:created rdf:parseType=\"Resource\">\n            <dcterms:W3CDTF>2020-10-30T15:25:02Z</dcterms:W3CDTF>\n          </dcterms:created>\n          <dcterms:modified rdf:parseType=\"Resource\">\n            <dcterms:W3CDTF>2020-10-30T15:25:02Z</dcterms:W3CDTF>\n          </dcterms:modified>\n          <bqmodel:isDescribedBy>\n            <rdf:Bag>\n              <rdf:li rdf:resource=\"http://identifiers.org/pubmed/32604803\"/>\n            </rdf:Bag>\n          </bqmodel:isDescribedBy>\n          <bqbiol:occursIn>\n            <rdf:Bag>\n              <rdf:li rdf:resource=\"http://identifiers.org/ncit/C77681\"/>\n            </rdf:Bag>\n          </bqbiol:occursIn>\n          <bqbiol:hasTaxon>\n            <rdf:Bag>\n              <rdf:li rdf:resource=\"http://identifiers.org/taxonomy/9606\"/>\n            </rdf:Bag>\n          </bqbiol:hasTaxon>\n          <bqbiol:hasProperty>\n            <rdf:Bag>\n              <rdf:li rdf:resource=\"http://identifiers.org/go/GO:0007596\"/>\n              <rdf:li rdf:resource=\"http://identifiers.org/go/GO:0070527\"/>\n              <rdf:li rdf:resource=\"http://identifiers.org/mamo/MAMO_0000046\"/>\n            </rdf:Bag>\n          </bqbiol:hasProperty>\n          <bqmodel:is>\n            <rdf:Bag>\n              <rdf:li rdf:resource=\"http://identifiers.org/biomodels.db/MODEL2011030002\"/>\n              <rdf:li rdf:resource=\"http://identifiers.org/biomodels.db/BIOMD0000000973\"/>\n            </rdf:Bag>\n          </bqmodel:is>\n        </rdf:Description>\n      </rdf:RDF>\n    </annotation>\n    <listOfFunctionDefinitions>\n      <functionDefinition metaid=\"COPASI18\" id=\"R3_flux\" name=\"R3_flux\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI18\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:44:41Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <lambda>\n            <bvar>\n              <ci> k_1 </ci>\n            </bvar>\n            <bvar>\n              <ci> n </ci>\n            </bvar>\n            <apply>\n              <times/>\n              <ci> k_1 </ci>\n              <ci> n </ci>\n            </apply>\n          </lambda>\n        </math>\n      </functionDefinition>\n      <functionDefinition metaid=\"COPASI19\" id=\"R4_flux\" name=\"R4_flux\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI19\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:44:41Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <lambda>\n            <bvar>\n              <ci> k2 </ci>\n            </bvar>\n            <bvar>\n              <ci> p </ci>\n            </bvar>\n            <apply>\n              <times/>\n              <ci> k2 </ci>\n              <apply>\n                <power/>\n                <ci> p </ci>\n                <cn> 2 </cn>\n              </apply>\n            </apply>\n          </lambda>\n        </math>\n      </functionDefinition>\n      <functionDefinition metaid=\"COPASI20\" id=\"R5_flux\" name=\"R5_flux\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI20\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:44:42Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <lambda>\n            <bvar>\n              <ci> k_2 </ci>\n            </bvar>\n            <bvar>\n              <ci> n </ci>\n            </bvar>\n            <apply>\n              <times/>\n              <ci> k_2 </ci>\n              <apply>\n                <power/>\n                <ci> n </ci>\n                <cn> 2 </cn>\n              </apply>\n            </apply>\n          </lambda>\n        </math>\n      </functionDefinition>\n      <functionDefinition metaid=\"COPASI17\" id=\"R2_flux\" name=\"R2_flux\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI17\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:44:40Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <lambda>\n            <bvar>\n              <ci> k2 </ci>\n            </bvar>\n            <bvar>\n              <ci> p </ci>\n            </bvar>\n            <apply>\n              <times/>\n              <cn> 2 </cn>\n              <ci> k2 </ci>\n              <apply>\n                <power/>\n                <ci> p </ci>\n                <cn> 2 </cn>\n              </apply>\n            </apply>\n          </lambda>\n        </math>\n      </functionDefinition>\n      <functionDefinition metaid=\"COPASI21\" id=\"R1_flux\" name=\"R1_flux\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI21\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:44:39Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <lambda>\n            <bvar>\n              <ci> k1 </ci>\n            </bvar>\n            <bvar>\n              <ci> n </ci>\n            </bvar>\n            <bvar>\n              <ci> p </ci>\n            </bvar>\n            <apply>\n              <times/>\n              <ci> k1 </ci>\n              <ci> n </ci>\n              <ci> p </ci>\n            </apply>\n          </lambda>\n        </math>\n      </functionDefinition>\n    </listOfFunctionDefinitions>\n    <listOfUnitDefinitions>\n      <unitDefinition id=\"length\" name=\"length\">\n        <listOfUnits>\n          <unit kind=\"metre\" exponent=\"1\" scale=\"0\" multiplier=\"1\"/>\n        </listOfUnits>\n      </unitDefinition>\n      <unitDefinition id=\"volume\" name=\"volume\">\n        <listOfUnits>\n          <unit kind=\"litre\" exponent=\"1\" scale=\"0\" multiplier=\"1\"/>\n        </listOfUnits>\n      </unitDefinition>\n      <unitDefinition id=\"time\" name=\"time\">\n        <listOfUnits>\n          <unit kind=\"second\" exponent=\"1\" scale=\"0\" multiplier=\"1\"/>\n        </listOfUnits>\n      </unitDefinition>\n      <unitDefinition id=\"area\" name=\"area\">\n        <listOfUnits>\n          <unit kind=\"metre\" exponent=\"2\" scale=\"0\" multiplier=\"1\"/>\n        </listOfUnits>\n      </unitDefinition>\n      <unitDefinition id=\"substance\" name=\"substance\">\n        <listOfUnits>\n          <unit kind=\"mole\" exponent=\"1\" scale=\"0\" multiplier=\"1\"/>\n        </listOfUnits>\n      </unitDefinition>\n    </listOfUnitDefinitions>\n    <listOfCompartments>\n      <compartment metaid=\"COPASI1\" id=\"Cell\" name=\"Cell\" spatialDimensions=\"3\" size=\"1\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI1\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:29:06Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </compartment>\n    </listOfCompartments>\n    <listOfSpecies>\n      <species metaid=\"COPASI2\" id=\"P\" name=\"P\" compartment=\"Cell\" initialConcentration=\"10000\" hasOnlySubstanceUnits=\"false\" boundaryCondition=\"false\" constant=\"false\">\n        <notes>\n          <body xmlns=\"http://www.w3.org/1999/xhtml\">\n            <pre>Concentration of single receptor/particle</pre>\n          </body>\n        </notes>\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:CopasiMT=\"http://www.copasi.org/RDF/MiriamTerms#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI2\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:31:05Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n                <CopasiMT:isVersionOf rdf:resource=\"urn:miriam:ncit:C18106\"/>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI2\">\n              <bqbiol:isVersionOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C18106\"/>\n                </rdf:Bag>\n              </bqbiol:isVersionOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n      </species>\n      <species metaid=\"COPASI3\" id=\"N\" name=\"N\" compartment=\"Cell\" initialConcentration=\"0\" hasOnlySubstanceUnits=\"false\" boundaryCondition=\"false\" constant=\"false\">\n        <notes>\n          <body xmlns=\"http://www.w3.org/1999/xhtml\">\n            <pre>Concentration of receptor aggregate</pre>\n          </body>\n        </notes>\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:CopasiMT=\"http://www.copasi.org/RDF/MiriamTerms#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI3\">\n                <bqbiol:hasProperty rdf:resource=\"urn:miriam:ncit:C18106\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:32:16Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n                <CopasiMT:isVersionOf rdf:resource=\"urn:miriam:ncit:C62344\"/>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI3\">\n              <bqbiol:isVersionOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C62344\"/>\n                </rdf:Bag>\n              </bqbiol:isVersionOf>\n              <bqbiol:hasProperty>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C18106\"/>\n                </rdf:Bag>\n              </bqbiol:hasProperty>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n      </species>\n    </listOfSpecies>\n    <listOfParameters>\n      <parameter metaid=\"COPASI10\" id=\"p0\" name=\"p0\" value=\"10000\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI10\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:33:48Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI8\" id=\"k3\" name=\"k3\" value=\"1.16\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI8\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:33:19Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter id=\"ModelValue_6\" name=\"Initial for p0\" value=\"10000\" constant=\"true\">\n        <annotation>\n          <initialValue xmlns=\"http://copasi.org/initialValue\" parent=\"p0\"/>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI7\" id=\"k_2\" name=\"k_2\" value=\"0.03\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI7\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:33:17Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI4\" id=\"k1\" name=\"k1\" value=\"0.00021\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI4\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:32:40Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI9\" id=\"s\" name=\"s\" constant=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI9\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:33:36Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI5\" id=\"k2\" name=\"k2\" value=\"7.5e-06\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI5\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:32:44Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI6\" id=\"k_1\" name=\"k_1\" value=\"6.6e-09\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI6\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:32:52Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n    </listOfParameters>\n    <listOfInitialAssignments>\n      <initialAssignment symbol=\"ModelValue_6\">\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <ci> p0 </ci>\n        </math>\n      </initialAssignment>\n    </listOfInitialAssignments>\n    <listOfRules>\n      <assignmentRule variable=\"s\">\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <apply>\n            <divide/>\n            <apply>\n              <minus/>\n              <ci> ModelValue_6 </ci>\n              <ci> P </ci>\n            </apply>\n            <ci> N </ci>\n          </apply>\n        </math>\n      </assignmentRule>\n    </listOfRules>\n    <listOfReactions>\n      <reaction metaid=\"COPASI14\" id=\"R4\" name=\"R4\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI14\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:ncit:C62344\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:30:19Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI14\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C62344\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfProducts>\n          <speciesReference species=\"N\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfProducts>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <apply>\n                <ci> R4_flux </ci>\n                <ci> k2 </ci>\n                <ci> P </ci>\n              </apply>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n      <reaction metaid=\"COPASI13\" id=\"R3\" name=\"R3\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI13\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:sbo:SBO:0000180\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:30:13Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI13\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/sbo/SBO:0000180\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfProducts>\n          <speciesReference species=\"P\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfProducts>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <apply>\n                <ci> R3_flux </ci>\n                <ci> k_1 </ci>\n                <ci> N </ci>\n              </apply>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n      <reaction metaid=\"COPASI16\" id=\"R6\" name=\"R6\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI16\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:ncit:C62344\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:30:27Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI16\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C62344\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfReactants>\n          <speciesReference species=\"N\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfReactants>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <ci> k3 </ci>\n              <ci> N </ci>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n      <reaction metaid=\"COPASI11\" id=\"R1\" name=\"R1\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI11\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:ncit:C61470\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:29:18Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI11\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C61470\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfReactants>\n          <speciesReference species=\"P\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfReactants>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <apply>\n                <ci> R1_flux </ci>\n                <ci> k1 </ci>\n                <ci> N </ci>\n                <ci> P </ci>\n              </apply>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n      <reaction metaid=\"COPASI15\" id=\"R5\" name=\"R5\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI15\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:sbo:SBO:0000180\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:30:23Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI15\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/sbo/SBO:0000180\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfReactants>\n          <speciesReference species=\"N\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfReactants>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <apply>\n                <ci> R5_flux </ci>\n                <ci> k_2 </ci>\n                <ci> N </ci>\n              </apply>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n      <reaction metaid=\"COPASI12\" id=\"R2\" name=\"R2\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI12\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:ncit:C62344\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:29:21Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI12\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C62344\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfReactants>\n          <speciesReference species=\"P\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfReactants>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <apply>\n                <ci> R2_flux </ci>\n                <ci> k2 </ci>\n                <ci> P </ci>\n              </apply>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n    </listOfReactions>\n  </model>\n</sbml>\n"
  Stacktrace:
   [1] top-level scope
     @ ~/.julia/packages/SBML/mJIpc/test/writemodels.jl:40
   [2] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2244 [inlined]
   [3] macro expansion
     @ ~/.julia/packages/SBML/mJIpc/test/writemodels.jl:41 [inlined]
   [4] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2244 [inlined]
   [5] macro expansion
     @ ~/.julia/packages/SBML/mJIpc/test/writemodels.jl:48 [inlined]
   [6] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:782 [inlined]

Model Dasgupta2020.xml writes out as expected: Test Failed at /home/pkgeval/.julia/packages/SBML/mJIpc/test/writemodels.jl:54
  Expression: content == expected
   Evaluated: "<?xml version=\"1.0\" encoding=\"UTF-8\"?>\n<sbml xmlns=\"http://www.sbml.org/sbml/level3/version2/core\" level=\"3\" version=\"2\">\n  <model metaid=\"COPASI0\" id=\"Dasgupta2020___Reduced_model_of_receptor_clusturing_and_aggregation\" name=\"Dasgupta2020 - Reduced model of receptor clusturing and aggregation\">\n    <notes>\n      <body xmlns=\"http://www.w3.org/1999/xhtml\">\n        <p>a simple kinetic mass-action-law-based model could be utilized to adequately describe clustering in\nresponse to activation both in 2D and in 3D</p>\n      </body>\n    </notes>\n    <annotation>\n      <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n        <rdf:RDF xmlns:CopasiMT=\"http://www.copasi.org/RDF/MiriamTerms#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\">\n          <rdf:Description rdf:about=\"#COPASI0\">\n            <bqbiol:hasProperty rdf:resource=\"urn:miriam:go:GO:0007596\"/>\n            <bqbiol:hasProperty rdf:resource=\"urn:miriam:go:GO:0070527\"/>\n            <bqbiol:hasProperty rdf:resource=\"urn:miriam:mamo:MAMO_0000046\"/>\n            <bqbiol:hasTaxon rdf:resource=\"urn:miriam:taxonomy:9606\"/>\n            <dcterms:bibliographicCitation>\n              <rdf:Description>\n                <CopasiMT:isDescribedBy rdf:resource=\"urn:miriam:pubmed:32604803\"/>\n              </rdf:Description>\n            </dcterms:bibliographicCitation>\n            <dcterms:created>\n              <rdf:Description>\n                <dcterms:W3CDTF>2020-10-30T15:25:02Z</dcterms:W3CDTF>\n              </rdf:Description>\n            </dcterms:created>\n            <dcterms:creator>\n              <rdf:Description>\n                <vCard:EMAIL>tiwarik@babraham.ac.uk</vCard:EMAIL>\n                <vCard:N>\n                  <rdf:Description>\n                    <vCard:Family>Tiwari</vCard:Family>\n                    <vCard:Given>Krishna</vCard:Given>\n                  </rdf:Description>\n                </vCard:N>\n                <vCard:ORG>\n                  <rdf:Description>\n                    <vCard:Orgname>Babraham Institute</vCard:Orgname>\n                  </rdf:Description>\n                </vCard:ORG>\n              </rdf:Description>\n            </dcterms:creator>\n            <CopasiMT:occursIn rdf:resource=\"urn:miriam:ncit:C77681\"/>\n          </rdf:Description>\n        </rdf:RDF>\n      </COPASI>\n      <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n        <rdf:Description rdf:about=\"#COPASI0\">\n          <dcterms:creator>\n            <rdf:Bag>\n              <rdf:li rdf:parseType=\"Resource\">\n                <vCard4:hasName rdf:parseType=\"Resource\">\n                  <vCard4:family-name>Tiwari</vCard4:family-name>\n                  <vCard4:given-name>Krishna</vCard4:given-name>\n                </vCard4:hasName>\n                <vCard4:hasEmail>tiwarik@babraham.ac.uk</vCard4:hasEmail>\n                <vCard4:organization-name>Babraham Institute</vCard4:organization-name>\n              </rdf:li>\n            </rdf:Bag>\n          </dcterms:creator>\n          <dcterms:created rdf:parseType=\"Resource\">\n            <dcterms:W3CDTF>2020-10-30T15:25:02Z</dcterms:W3CDTF>\n          </dcterms:created>\n          <dcterms:modified rdf:parseType=\"Resource\">\n            <dcterms:W3CDTF>2020-10-30T15:25:02Z</dcterms:W3CDTF>\n          </dcterms:modified>\n          <bqmodel:isDescribedBy>\n            <rdf:Bag>\n              <rdf:li rdf:resource=\"http://identifiers.org/pubmed/32604803\"/>\n            </rdf:Bag>\n          </bqmodel:isDescribedBy>\n          <bqbiol:occursIn>\n            <rdf:Bag>\n              <rdf:li rdf:resource=\"http://identifiers.org/ncit/C77681\"/>\n            </rdf:Bag>\n          </bqbiol:occursIn>\n          <bqbiol:hasTaxon>\n            <rdf:Bag>\n              <rdf:li rdf:resource=\"http://identifiers.org/taxonomy/9606\"/>\n            </rdf:Bag>\n          </bqbiol:hasTaxon>\n          <bqbiol:hasProperty>\n            <rdf:Bag>\n              <rdf:li rdf:resource=\"http://identifiers.org/go/GO:0007596\"/>\n              <rdf:li rdf:resource=\"http://identifiers.org/go/GO:0070527\"/>\n              <rdf:li rdf:resource=\"http://identifiers.org/mamo/MAMO_0000046\"/>\n            </rdf:Bag>\n          </bqbiol:hasProperty>\n          <bqmodel:is>\n            <rdf:Bag>\n              <rdf:li rdf:resource=\"http://identifiers.org/biomodels.db/MODEL2011030002\"/>\n              <rdf:li rdf:resource=\"http://identifiers.org/biomodels.db/BIOMD0000000973\"/>\n            </rdf:Bag>\n          </bqmodel:is>\n        </rdf:Description>\n      </rdf:RDF>\n    </annotation>\n    <listOfFunctionDefinitions>\n      <functionDefinition metaid=\"COPASI18\" id=\"R3_flux\" name=\"R3_flux\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI18\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:44:41Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <lambda>\n            <bvar>\n              <ci> k_1 </ci>\n            </bvar>\n            <bvar>\n              <ci> n </ci>\n            </bvar>\n            <apply>\n              <times/>\n              <ci> k_1 </ci>\n              <ci> n </ci>\n            </apply>\n          </lambda>\n        </math>\n      </functionDefinition>\n      <functionDefinition metaid=\"COPASI19\" id=\"R4_flux\" name=\"R4_flux\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI19\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:44:41Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <lambda>\n            <bvar>\n              <ci> k2 </ci>\n            </bvar>\n            <bvar>\n              <ci> p </ci>\n            </bvar>\n            <apply>\n              <times/>\n              <ci> k2 </ci>\n              <apply>\n                <power/>\n                <ci> p </ci>\n                <cn> 2 </cn>\n              </apply>\n            </apply>\n          </lambda>\n        </math>\n      </functionDefinition>\n      <functionDefinition metaid=\"COPASI17\" id=\"R2_flux\" name=\"R2_flux\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI17\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:44:40Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <lambda>\n            <bvar>\n              <ci> k2 </ci>\n            </bvar>\n            <bvar>\n              <ci> p </ci>\n            </bvar>\n            <apply>\n              <times/>\n              <cn> 2 </cn>\n              <ci> k2 </ci>\n              <apply>\n                <power/>\n                <ci> p </ci>\n                <cn> 2 </cn>\n              </apply>\n            </apply>\n          </lambda>\n        </math>\n      </functionDefinition>\n      <functionDefinition metaid=\"COPASI21\" id=\"R1_flux\" name=\"R1_flux\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI21\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:44:39Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <lambda>\n            <bvar>\n              <ci> k1 </ci>\n            </bvar>\n            <bvar>\n              <ci> n </ci>\n            </bvar>\n            <bvar>\n              <ci> p </ci>\n            </bvar>\n            <apply>\n              <times/>\n              <ci> k1 </ci>\n              <ci> n </ci>\n              <ci> p </ci>\n            </apply>\n          </lambda>\n        </math>\n      </functionDefinition>\n      <functionDefinition metaid=\"COPASI20\" id=\"R5_flux\" name=\"R5_flux\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI20\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:44:42Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <lambda>\n            <bvar>\n              <ci> k_2 </ci>\n            </bvar>\n            <bvar>\n              <ci> n </ci>\n            </bvar>\n            <apply>\n              <times/>\n              <ci> k_2 </ci>\n              <apply>\n                <power/>\n                <ci> n </ci>\n                <cn> 2 </cn>\n              </apply>\n            </apply>\n          </lambda>\n        </math>\n      </functionDefinition>\n    </listOfFunctionDefinitions>\n    <listOfUnitDefinitions>\n      <unitDefinition id=\"length\" name=\"length\">\n        <listOfUnits>\n          <unit kind=\"metre\" exponent=\"1\" scale=\"0\" multiplier=\"1\"/>\n        </listOfUnits>\n      </unitDefinition>\n      <unitDefinition id=\"substance\" name=\"substance\">\n        <listOfUnits>\n          <unit kind=\"mole\" exponent=\"1\" scale=\"0\" multiplier=\"1\"/>\n        </listOfUnits>\n      </unitDefinition>\n      <unitDefinition id=\"time\" name=\"time\">\n        <listOfUnits>\n          <unit kind=\"second\" exponent=\"1\" scale=\"0\" multiplier=\"1\"/>\n        </listOfUnits>\n      </unitDefinition>\n      <unitDefinition id=\"volume\" name=\"volume\">\n        <listOfUnits>\n          <unit kind=\"litre\" exponent=\"1\" scale=\"0\" multiplier=\"1\"/>\n        </listOfUnits>\n      </unitDefinition>\n      <unitDefinition id=\"area\" name=\"area\">\n        <listOfUnits>\n          <unit kind=\"metre\" exponent=\"2\" scale=\"0\" multiplier=\"1\"/>\n        </listOfUnits>\n      </unitDefinition>\n    </listOfUnitDefinitions>\n    <listOfCompartments>\n      <compartment metaid=\"COPASI1\" id=\"Cell\" name=\"Cell\" spatialDimensions=\"3\" size=\"1\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI1\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:29:06Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </compartment>\n    </listOfCompartments>\n    <listOfSpecies>\n      <species metaid=\"COPASI3\" id=\"N\" name=\"N\" compartment=\"Cell\" initialConcentration=\"0\" hasOnlySubstanceUnits=\"false\" boundaryCondition=\"false\" constant=\"false\">\n        <notes>\n          <body xmlns=\"http://www.w3.org/1999/xhtml\">\n            <pre>Concentration of receptor aggregate</pre>\n          </body>\n        </notes>\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:CopasiMT=\"http://www.copasi.org/RDF/MiriamTerms#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI3\">\n                <bqbiol:hasProperty rdf:resource=\"urn:miriam:ncit:C18106\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:32:16Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n                <CopasiMT:isVersionOf rdf:resource=\"urn:miriam:ncit:C62344\"/>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI3\">\n              <bqbiol:isVersionOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C62344\"/>\n                </rdf:Bag>\n              </bqbiol:isVersionOf>\n              <bqbiol:hasProperty>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C18106\"/>\n                </rdf:Bag>\n              </bqbiol:hasProperty>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n      </species>\n      <species metaid=\"COPASI2\" id=\"P\" name=\"P\" compartment=\"Cell\" initialConcentration=\"10000\" hasOnlySubstanceUnits=\"false\" boundaryCondition=\"false\" constant=\"false\">\n        <notes>\n          <body xmlns=\"http://www.w3.org/1999/xhtml\">\n            <pre>Concentration of single receptor/particle</pre>\n          </body>\n        </notes>\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:CopasiMT=\"http://www.copasi.org/RDF/MiriamTerms#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI2\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:31:05Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n                <CopasiMT:isVersionOf rdf:resource=\"urn:miriam:ncit:C18106\"/>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI2\">\n              <bqbiol:isVersionOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C18106\"/>\n                </rdf:Bag>\n              </bqbiol:isVersionOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n      </species>\n    </listOfSpecies>\n    <listOfParameters>\n      <parameter metaid=\"COPASI9\" id=\"s\" name=\"s\" constant=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI9\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:33:36Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter id=\"ModelValue_6\" name=\"Initial for p0\" value=\"10000\" constant=\"true\">\n        <annotation>\n          <initialValue xmlns=\"http://copasi.org/initialValue\" parent=\"p0\"/>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI10\" id=\"p0\" name=\"p0\" value=\"10000\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI10\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:33:48Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI4\" id=\"k1\" name=\"k1\" value=\"0.00021\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI4\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:32:40Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI8\" id=\"k3\" name=\"k3\" value=\"1.16\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI8\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:33:19Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI5\" id=\"k2\" name=\"k2\" value=\"7.5e-06\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI5\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:32:44Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI6\" id=\"k_1\" name=\"k_1\" value=\"6.6e-09\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI6\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:32:52Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI7\" id=\"k_2\" name=\"k_2\" value=\"0.03\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI7\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:33:17Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n    </listOfParameters>\n    <listOfInitialAssignments>\n      <initialAssignment symbol=\"ModelValue_6\">\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <ci> p0 </ci>\n        </math>\n      </initialAssignment>\n    </listOfInitialAssignments>\n    <listOfRules>\n      <assignmentRule variable=\"s\">\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <apply>\n            <divide/>\n            <apply>\n              <minus/>\n              <ci> ModelValue_6 </ci>\n              <ci> P </ci>\n            </apply>\n            <ci> N </ci>\n          </apply>\n        </math>\n      </assignmentRule>\n    </listOfRules>\n    <listOfReactions>\n      <reaction metaid=\"COPASI14\" id=\"R4\" name=\"R4\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI14\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:ncit:C62344\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:30:19Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI14\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C62344\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfProducts>\n          <speciesReference species=\"N\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfProducts>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <apply>\n                <ci> R4_flux </ci>\n                <ci> k2 </ci>\n                <ci> P </ci>\n              </apply>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n      <reaction metaid=\"COPASI15\" id=\"R5\" name=\"R5\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI15\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:sbo:SBO:0000180\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:30:23Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI15\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/sbo/SBO:0000180\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfReactants>\n          <speciesReference species=\"N\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfReactants>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <apply>\n                <ci> R5_flux </ci>\n                <ci> k_2 </ci>\n                <ci> N </ci>\n              </apply>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n      <reaction metaid=\"COPASI13\" id=\"R3\" name=\"R3\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI13\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:sbo:SBO:0000180\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:30:13Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI13\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/sbo/SBO:0000180\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfProducts>\n          <speciesReference species=\"P\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfProducts>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <apply>\n                <ci> R3_flux </ci>\n                <ci> k_1 </ci>\n                <ci> N </ci>\n              </apply>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n      <reaction metaid=\"COPASI16\" id=\"R6\" name=\"R6\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI16\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:ncit:C62344\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:30:27Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI16\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C62344\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfReactants>\n          <speciesReference species=\"N\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfReactants>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <ci> k3 </ci>\n              <ci> N </ci>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n      <reaction metaid=\"COPASI11\" id=\"R1\" name=\"R1\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI11\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:ncit:C61470\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:29:18Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI11\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C61470\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfReactants>\n          <speciesReference species=\"P\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfReactants>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <apply>\n                <ci> R1_flux </ci>\n                <ci> k1 </ci>\n                <ci> N </ci>\n                <ci> P </ci>\n              </apply>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n      <reaction metaid=\"COPASI12\" id=\"R2\" name=\"R2\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI12\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:ncit:C62344\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:29:21Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI12\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C62344\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfReactants>\n          <speciesReference species=\"P\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfReactants>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <apply>\n                <ci> R2_flux </ci>\n                <ci> k2 </ci>\n                <ci> P </ci>\n              </apply>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n    </listOfReactions>\n  </model>\n</sbml>\n" == "<?xml version=\"1.0\" encoding=\"UTF-8\"?>\n<sbml xmlns=\"http://www.sbml.org/sbml/level3/version2/core\" level=\"3\" version=\"2\">\n  <model metaid=\"COPASI0\" id=\"Dasgupta2020___Reduced_model_of_receptor_clusturing_and_aggregation\" name=\"Dasgupta2020 - Reduced model of receptor clusturing and aggregation\">\n    <notes>\n      <body xmlns=\"http://www.w3.org/1999/xhtml\">\n        <p>a simple kinetic mass-action-law-based model could be utilized to adequately describe clustering in\nresponse to activation both in 2D and in 3D</p>\n      </body>\n    </notes>\n    <annotation>\n      <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n        <rdf:RDF xmlns:CopasiMT=\"http://www.copasi.org/RDF/MiriamTerms#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\">\n          <rdf:Description rdf:about=\"#COPASI0\">\n            <bqbiol:hasProperty rdf:resource=\"urn:miriam:go:GO:0007596\"/>\n            <bqbiol:hasProperty rdf:resource=\"urn:miriam:go:GO:0070527\"/>\n            <bqbiol:hasProperty rdf:resource=\"urn:miriam:mamo:MAMO_0000046\"/>\n            <bqbiol:hasTaxon rdf:resource=\"urn:miriam:taxonomy:9606\"/>\n            <dcterms:bibliographicCitation>\n              <rdf:Description>\n                <CopasiMT:isDescribedBy rdf:resource=\"urn:miriam:pubmed:32604803\"/>\n              </rdf:Description>\n            </dcterms:bibliographicCitation>\n            <dcterms:created>\n              <rdf:Description>\n                <dcterms:W3CDTF>2020-10-30T15:25:02Z</dcterms:W3CDTF>\n              </rdf:Description>\n            </dcterms:created>\n            <dcterms:creator>\n              <rdf:Description>\n                <vCard:EMAIL>tiwarik@babraham.ac.uk</vCard:EMAIL>\n                <vCard:N>\n                  <rdf:Description>\n                    <vCard:Family>Tiwari</vCard:Family>\n                    <vCard:Given>Krishna</vCard:Given>\n                  </rdf:Description>\n                </vCard:N>\n                <vCard:ORG>\n                  <rdf:Description>\n                    <vCard:Orgname>Babraham Institute</vCard:Orgname>\n                  </rdf:Description>\n                </vCard:ORG>\n              </rdf:Description>\n            </dcterms:creator>\n            <CopasiMT:occursIn rdf:resource=\"urn:miriam:ncit:C77681\"/>\n          </rdf:Description>\n        </rdf:RDF>\n      </COPASI>\n      <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n        <rdf:Description rdf:about=\"#COPASI0\">\n          <dcterms:creator>\n            <rdf:Bag>\n              <rdf:li rdf:parseType=\"Resource\">\n                <vCard4:hasName rdf:parseType=\"Resource\">\n                  <vCard4:family-name>Tiwari</vCard4:family-name>\n                  <vCard4:given-name>Krishna</vCard4:given-name>\n                </vCard4:hasName>\n                <vCard4:hasEmail>tiwarik@babraham.ac.uk</vCard4:hasEmail>\n                <vCard4:organization-name>Babraham Institute</vCard4:organization-name>\n              </rdf:li>\n            </rdf:Bag>\n          </dcterms:creator>\n          <dcterms:created rdf:parseType=\"Resource\">\n            <dcterms:W3CDTF>2020-10-30T15:25:02Z</dcterms:W3CDTF>\n          </dcterms:created>\n          <dcterms:modified rdf:parseType=\"Resource\">\n            <dcterms:W3CDTF>2020-10-30T15:25:02Z</dcterms:W3CDTF>\n          </dcterms:modified>\n          <bqmodel:isDescribedBy>\n            <rdf:Bag>\n              <rdf:li rdf:resource=\"http://identifiers.org/pubmed/32604803\"/>\n            </rdf:Bag>\n          </bqmodel:isDescribedBy>\n          <bqbiol:occursIn>\n            <rdf:Bag>\n              <rdf:li rdf:resource=\"http://identifiers.org/ncit/C77681\"/>\n            </rdf:Bag>\n          </bqbiol:occursIn>\n          <bqbiol:hasTaxon>\n            <rdf:Bag>\n              <rdf:li rdf:resource=\"http://identifiers.org/taxonomy/9606\"/>\n            </rdf:Bag>\n          </bqbiol:hasTaxon>\n          <bqbiol:hasProperty>\n            <rdf:Bag>\n              <rdf:li rdf:resource=\"http://identifiers.org/go/GO:0007596\"/>\n              <rdf:li rdf:resource=\"http://identifiers.org/go/GO:0070527\"/>\n              <rdf:li rdf:resource=\"http://identifiers.org/mamo/MAMO_0000046\"/>\n            </rdf:Bag>\n          </bqbiol:hasProperty>\n          <bqmodel:is>\n            <rdf:Bag>\n              <rdf:li rdf:resource=\"http://identifiers.org/biomodels.db/MODEL2011030002\"/>\n              <rdf:li rdf:resource=\"http://identifiers.org/biomodels.db/BIOMD0000000973\"/>\n            </rdf:Bag>\n          </bqmodel:is>\n        </rdf:Description>\n      </rdf:RDF>\n    </annotation>\n    <listOfFunctionDefinitions>\n      <functionDefinition metaid=\"COPASI18\" id=\"R3_flux\" name=\"R3_flux\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI18\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:44:41Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <lambda>\n            <bvar>\n              <ci> k_1 </ci>\n            </bvar>\n            <bvar>\n              <ci> n </ci>\n            </bvar>\n            <apply>\n              <times/>\n              <ci> k_1 </ci>\n              <ci> n </ci>\n            </apply>\n          </lambda>\n        </math>\n      </functionDefinition>\n      <functionDefinition metaid=\"COPASI19\" id=\"R4_flux\" name=\"R4_flux\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI19\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:44:41Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <lambda>\n            <bvar>\n              <ci> k2 </ci>\n            </bvar>\n            <bvar>\n              <ci> p </ci>\n            </bvar>\n            <apply>\n              <times/>\n              <ci> k2 </ci>\n              <apply>\n                <power/>\n                <ci> p </ci>\n                <cn> 2 </cn>\n              </apply>\n            </apply>\n          </lambda>\n        </math>\n      </functionDefinition>\n      <functionDefinition metaid=\"COPASI20\" id=\"R5_flux\" name=\"R5_flux\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI20\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:44:42Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <lambda>\n            <bvar>\n              <ci> k_2 </ci>\n            </bvar>\n            <bvar>\n              <ci> n </ci>\n            </bvar>\n            <apply>\n              <times/>\n              <ci> k_2 </ci>\n              <apply>\n                <power/>\n                <ci> n </ci>\n                <cn> 2 </cn>\n              </apply>\n            </apply>\n          </lambda>\n        </math>\n      </functionDefinition>\n      <functionDefinition metaid=\"COPASI17\" id=\"R2_flux\" name=\"R2_flux\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI17\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:44:40Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <lambda>\n            <bvar>\n              <ci> k2 </ci>\n            </bvar>\n            <bvar>\n              <ci> p </ci>\n            </bvar>\n            <apply>\n              <times/>\n              <cn> 2 </cn>\n              <ci> k2 </ci>\n              <apply>\n                <power/>\n                <ci> p </ci>\n                <cn> 2 </cn>\n              </apply>\n            </apply>\n          </lambda>\n        </math>\n      </functionDefinition>\n      <functionDefinition metaid=\"COPASI21\" id=\"R1_flux\" name=\"R1_flux\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI21\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:44:39Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <lambda>\n            <bvar>\n              <ci> k1 </ci>\n            </bvar>\n            <bvar>\n              <ci> n </ci>\n            </bvar>\n            <bvar>\n              <ci> p </ci>\n            </bvar>\n            <apply>\n              <times/>\n              <ci> k1 </ci>\n              <ci> n </ci>\n              <ci> p </ci>\n            </apply>\n          </lambda>\n        </math>\n      </functionDefinition>\n    </listOfFunctionDefinitions>\n    <listOfUnitDefinitions>\n      <unitDefinition id=\"length\" name=\"length\">\n        <listOfUnits>\n          <unit kind=\"metre\" exponent=\"1\" scale=\"0\" multiplier=\"1\"/>\n        </listOfUnits>\n      </unitDefinition>\n      <unitDefinition id=\"volume\" name=\"volume\">\n        <listOfUnits>\n          <unit kind=\"litre\" exponent=\"1\" scale=\"0\" multiplier=\"1\"/>\n        </listOfUnits>\n      </unitDefinition>\n      <unitDefinition id=\"time\" name=\"time\">\n        <listOfUnits>\n          <unit kind=\"second\" exponent=\"1\" scale=\"0\" multiplier=\"1\"/>\n        </listOfUnits>\n      </unitDefinition>\n      <unitDefinition id=\"area\" name=\"area\">\n        <listOfUnits>\n          <unit kind=\"metre\" exponent=\"2\" scale=\"0\" multiplier=\"1\"/>\n        </listOfUnits>\n      </unitDefinition>\n      <unitDefinition id=\"substance\" name=\"substance\">\n        <listOfUnits>\n          <unit kind=\"mole\" exponent=\"1\" scale=\"0\" multiplier=\"1\"/>\n        </listOfUnits>\n      </unitDefinition>\n    </listOfUnitDefinitions>\n    <listOfCompartments>\n      <compartment metaid=\"COPASI1\" id=\"Cell\" name=\"Cell\" spatialDimensions=\"3\" size=\"1\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI1\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:29:06Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </compartment>\n    </listOfCompartments>\n    <listOfSpecies>\n      <species metaid=\"COPASI2\" id=\"P\" name=\"P\" compartment=\"Cell\" initialConcentration=\"10000\" hasOnlySubstanceUnits=\"false\" boundaryCondition=\"false\" constant=\"false\">\n        <notes>\n          <body xmlns=\"http://www.w3.org/1999/xhtml\">\n            <pre>Concentration of single receptor/particle</pre>\n          </body>\n        </notes>\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:CopasiMT=\"http://www.copasi.org/RDF/MiriamTerms#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI2\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:31:05Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n                <CopasiMT:isVersionOf rdf:resource=\"urn:miriam:ncit:C18106\"/>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI2\">\n              <bqbiol:isVersionOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C18106\"/>\n                </rdf:Bag>\n              </bqbiol:isVersionOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n      </species>\n      <species metaid=\"COPASI3\" id=\"N\" name=\"N\" compartment=\"Cell\" initialConcentration=\"0\" hasOnlySubstanceUnits=\"false\" boundaryCondition=\"false\" constant=\"false\">\n        <notes>\n          <body xmlns=\"http://www.w3.org/1999/xhtml\">\n            <pre>Concentration of receptor aggregate</pre>\n          </body>\n        </notes>\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:CopasiMT=\"http://www.copasi.org/RDF/MiriamTerms#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI3\">\n                <bqbiol:hasProperty rdf:resource=\"urn:miriam:ncit:C18106\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:32:16Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n                <CopasiMT:isVersionOf rdf:resource=\"urn:miriam:ncit:C62344\"/>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI3\">\n              <bqbiol:isVersionOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C62344\"/>\n                </rdf:Bag>\n              </bqbiol:isVersionOf>\n              <bqbiol:hasProperty>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C18106\"/>\n                </rdf:Bag>\n              </bqbiol:hasProperty>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n      </species>\n    </listOfSpecies>\n    <listOfParameters>\n      <parameter metaid=\"COPASI10\" id=\"p0\" name=\"p0\" value=\"10000\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI10\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:33:48Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI8\" id=\"k3\" name=\"k3\" value=\"1.16\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI8\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:33:19Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter id=\"ModelValue_6\" name=\"Initial for p0\" value=\"10000\" constant=\"true\">\n        <annotation>\n          <initialValue xmlns=\"http://copasi.org/initialValue\" parent=\"p0\"/>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI7\" id=\"k_2\" name=\"k_2\" value=\"0.03\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI7\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:33:17Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI4\" id=\"k1\" name=\"k1\" value=\"0.00021\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI4\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:32:40Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI9\" id=\"s\" name=\"s\" constant=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI9\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:33:36Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI5\" id=\"k2\" name=\"k2\" value=\"7.5e-06\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI5\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:32:44Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n      <parameter metaid=\"COPASI6\" id=\"k_1\" name=\"k_1\" value=\"6.6e-09\" constant=\"true\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI6\">\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:32:52Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n        </annotation>\n      </parameter>\n    </listOfParameters>\n    <listOfInitialAssignments>\n      <initialAssignment symbol=\"ModelValue_6\">\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <ci> p0 </ci>\n        </math>\n      </initialAssignment>\n    </listOfInitialAssignments>\n    <listOfRules>\n      <assignmentRule variable=\"s\">\n        <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n          <apply>\n            <divide/>\n            <apply>\n              <minus/>\n              <ci> ModelValue_6 </ci>\n              <ci> P </ci>\n            </apply>\n            <ci> N </ci>\n          </apply>\n        </math>\n      </assignmentRule>\n    </listOfRules>\n    <listOfReactions>\n      <reaction metaid=\"COPASI14\" id=\"R4\" name=\"R4\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI14\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:ncit:C62344\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:30:19Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI14\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C62344\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfProducts>\n          <speciesReference species=\"N\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfProducts>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <apply>\n                <ci> R4_flux </ci>\n                <ci> k2 </ci>\n                <ci> P </ci>\n              </apply>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n      <reaction metaid=\"COPASI13\" id=\"R3\" name=\"R3\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI13\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:sbo:SBO:0000180\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:30:13Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI13\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/sbo/SBO:0000180\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfProducts>\n          <speciesReference species=\"P\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfProducts>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <apply>\n                <ci> R3_flux </ci>\n                <ci> k_1 </ci>\n                <ci> N </ci>\n              </apply>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n      <reaction metaid=\"COPASI16\" id=\"R6\" name=\"R6\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI16\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:ncit:C62344\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:30:27Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI16\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C62344\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfReactants>\n          <speciesReference species=\"N\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfReactants>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <ci> k3 </ci>\n              <ci> N </ci>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n      <reaction metaid=\"COPASI11\" id=\"R1\" name=\"R1\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI11\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:ncit:C61470\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:29:18Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI11\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C61470\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfReactants>\n          <speciesReference species=\"P\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfReactants>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <apply>\n                <ci> R1_flux </ci>\n                <ci> k1 </ci>\n                <ci> N </ci>\n                <ci> P </ci>\n              </apply>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n      <reaction metaid=\"COPASI15\" id=\"R5\" name=\"R5\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI15\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:sbo:SBO:0000180\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:30:23Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI15\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/sbo/SBO:0000180\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfReactants>\n          <speciesReference species=\"N\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfReactants>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <apply>\n                <ci> R5_flux </ci>\n                <ci> k_2 </ci>\n                <ci> N </ci>\n              </apply>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n      <reaction metaid=\"COPASI12\" id=\"R2\" name=\"R2\" reversible=\"false\">\n        <annotation>\n          <COPASI xmlns=\"http://www.copasi.org/static/sbml\">\n            <rdf:RDF xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\">\n              <rdf:Description rdf:about=\"#COPASI12\">\n                <bqmodel:isInstanceOf rdf:resource=\"urn:miriam:ncit:C62344\"/>\n                <dcterms:created>\n                  <rdf:Description>\n                    <dcterms:W3CDTF>2020-10-30T15:29:21Z</dcterms:W3CDTF>\n                  </rdf:Description>\n                </dcterms:created>\n              </rdf:Description>\n            </rdf:RDF>\n          </COPASI>\n          <rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:vCard=\"http://www.w3.org/2001/vcard-rdf/3.0#\" xmlns:vCard4=\"http://www.w3.org/2006/vcard/ns#\" xmlns:bqbiol=\"http://biomodels.net/biology-qualifiers/\" xmlns:bqmodel=\"http://biomodels.net/model-qualifiers/\">\n            <rdf:Description rdf:about=\"#COPASI12\">\n              <bqmodel:isInstanceOf>\n                <rdf:Bag>\n                  <rdf:li rdf:resource=\"http://identifiers.org/ncit/C62344\"/>\n                </rdf:Bag>\n              </bqmodel:isInstanceOf>\n            </rdf:Description>\n          </rdf:RDF>\n        </annotation>\n        <listOfReactants>\n          <speciesReference species=\"P\" stoichiometry=\"1\" constant=\"true\"/>\n        </listOfReactants>\n        <kineticLaw>\n          <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n            <apply>\n              <times/>\n              <ci> Cell </ci>\n              <apply>\n                <ci> R2_flux </ci>\n                <ci> k2 </ci>\n                <ci> P </ci>\n              </apply>\n            </apply>\n          </math>\n        </kineticLaw>\n      </reaction>\n    </listOfReactions>\n  </model>\n</sbml>\n"
  Stacktrace:
   [1] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:782 [inlined]
   [2] (::var"#53#54"{Model})(filename::String, ::IOStream)
     @ Main ~/.julia/packages/SBML/mJIpc/test/writemodels.jl:54
   [3] mktemp(fn::var"#53#54"{Model}, parent::String)
     @ Base.Filesystem ./file.jl:907
   [4] mktemp(fn::Function)
     @ Base.Filesystem ./file.jl:905
   [5] top-level scope
     @ ~/.julia/packages/SBML/mJIpc/test/writemodels.jl:40
   [6] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2244 [inlined]
   [7] macro expansion
     @ ~/.julia/packages/SBML/mJIpc/test/writemodels.jl:41 [inlined]
   [8] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2244 [inlined]
   [9] macro expansion
     @ ~/.julia/packages/SBML/mJIpc/test/writemodels.jl:49 [inlined]
Test Summary:                                                 | Pass  Fail  Broken  Total     Time
SBML test suite                                               |  445     9       1    455  2m13.3s
  CCall to SBML works and SBML returns a version              |    1                    1     0.4s
  Symbolics compatibility                                     |    2                    2     8.8s
  SBML flux model loading                                     |   19     7             26    29.1s
  Loading of models from various sources - readSBML           |  133                  133    16.0s
  Loading of models from various sources - readSBMLFromString |  133                  133     7.2s
  readSBMLFromString                                          |    2                    2     0.7s
  Time variables in math                                      |    1                    1     1.1s
  Units                                                       |    5                    5     1.5s
  Initial amounts and concentrations                          |    8                    8     2.9s
  Initial assignments                                         |    2                    2     0.8s
  Rules                                                       |    2                    2     0.8s
  Constraints                                                 |    1                    1     0.2s
  Extensive kinetic math                                      |    6                    6     1.7s
  logBase and root math functions                             |    2                    2     1.0s
  rationals in math                                           |    1                    1     0.0s
  converters work and fail gracefully                         |   10                   10     2.3s
  relational operators are decoded correctly                  |    1                    1     0.0s
  custom show                                                 |    2                    2     5.3s
  events                                                      |    1                    1     0.0s
  model attributes                                            |   21                   21     0.0s
  names and identifiers of objects                            |   18                   18     0.6s
  constantness                                                |    2                    2     0.0s
  writeSBML                                                   |   40     2             42    41.2s
    Model Dasgupta2020.xml writes out as expected             |    2     2              4     6.2s
    Round-trip: e_coli_core.xml                               |    2                    2     4.7s
    Round-trip: T1M1133.xml                                   |    2                    2    12.3s
    Round-trip: Dasgupta2020.xml                              |    2                    2     0.2s
    Round-trip: yeast-GEM.xml                                 |    2                    2    16.9s
    Round-trip: 00852-sbml-l3v2.xml                           |    2                    2     0.1s
    Round-trip: 00140-sbml-l3v2.xml                           |    2                    2     0.0s
    Round-trip: 00374-sbml-l3v2.xml                           |    2                    2     0.4s
    Round-trip: 01565-sbml-l3v1.xml                           |    2                    2     0.1s
    Round-trip: 01289-sbml-l3v2.xml                           |    2                    2     0.0s
    Round-trip: 00191-sbml-l3v2.xml                           |    2                    2     0.0s
    Round-trip: 01234-sbml-l3v2.xml                           |    2                    2     0.0s
    Round-trip: 00489-sbml-l3v2.xml                           |    2                    2     0.0s
    Round-trip: 00026-sbml-l3v2.xml                           |    2                    2     0.0s
    Round-trip: 00983-sbml-l3v2.xml                           |    2                    2     0.0s
    Round-trip: 00054-sbml-l3v2.xml                           |    2                    2     0.0s
    Round-trip: 00975-sbml-l3v2.xml                           |    2                    2     0.0s
    Round-trip: 00976-sbml-l3v2.xml                           |    2                    2     0.0s
    Round-trip: 01323-sbml-l3v2.xml                           |    2                    2     0.1s
    Round-trip: 00878-sbml-l3v2.xml                           |    2                    2     0.0s
  Loading of models from sbml_test_suite                      |   23             1     24     0.8s
  Math interpretation                                         |    9                    9     0.9s
RNG of the outermost testset: Random.Xoshiro(0xbefebc1e2f7dae1a, 0x78f4bac44929cdb2, 0x2c9e201325f6a01d, 0x0f80ff264ac731e7, 0x757a86d6d43e9512)
ERROR: LoadError: Some tests did not pass: 445 passed, 9 failed, 0 errored, 1 broken.
in expression starting at /home/pkgeval/.julia/packages/SBML/mJIpc/test/runtests.jl:21

Testing failed after 192.75s

ERROR: LoadError: Package SBML errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3122
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2987 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572
  [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548
  [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172
  [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161
  [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160
  [9] test
    @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined]
 [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String)
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159
 [11] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:223
 [12] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [13] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:344
 [14] _start()
    @ Base ./client.jl:585
in expression starting at /PkgEval.jl/scripts/evaluate.jl:214

PkgEval failed after 506.71s: package fails to precompile