Package evaluation to test VCFTools on Julia 1.14.0-DEV.1601 (79ea5eb99c*) started at 2026-01-24T15:40:49.560 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 9.82s ################################################################################ # Installation # Installing VCFTools... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [a620830f] + VCFTools v0.2.10 Updating `~/.julia/environments/v1.14/Manifest.toml` [7d9f7c33] + Accessors v0.1.43 [66dad0bd] + AliasTables v1.1.3 [67c07d97] + Automa v1.1.0 [28d598bf] + BGZFStreams v0.3.2 [47718e42] + BioGenerics v0.1.5 [e1450e63] + BufferedStreams v1.2.2 [944b1d66] + CodecZlib v0.7.8 [861a8166] + Combinatorics v1.1.0 [38540f10] + CommonSolve v0.2.6 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.3 [8bb1440f] + DelimitedFiles v1.9.1 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [1a297f60] + FillArrays v1.16.0 [34004b35] + HypergeometricFunctions v0.3.28 [09f84164] + HypothesisTests v0.11.6 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [692b3bcd] + JLLWrappers v1.7.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] + Reexport v1.2.2 [79098fc4] + Rmath v0.9.0 [f2b01f46] + Roots v2.2.10 [fdea26ae] + SIMD v3.7.2 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [3bb67fe8] + TranscodingStreams v0.11.3 [a620830f] + VCFTools v0.2.10 [28eba6e3] + VariantCallFormat v0.5.9 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 Installation completed after 4.77s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 5842.7 ms ✓ HypothesisTests 6334.2 ms ✓ VCFTools 2 dependencies successfully precompiled in 19 seconds. 114 already precompiled. Precompilation completed after 34.93s ################################################################################ # Testing # Testing VCFTools Status `/tmp/jl_VVpizz/Project.toml` [336ed68f] CSV v0.10.15 [944b1d66] CodecZlib v0.7.8 [a93c6f00] DataFrames v1.8.1 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.123 [09f84164] HypothesisTests v0.11.6 [92933f4c] ProgressMeter v1.11.0 [276daf66] SpecialFunctions v2.6.1 [2913bbd2] StatsBase v0.34.10 [a620830f] VCFTools v0.2.10 [28eba6e3] VariantCallFormat v0.5.9 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_VVpizz/Manifest.toml` [7d9f7c33] Accessors v0.1.43 [66dad0bd] AliasTables v1.1.3 [67c07d97] Automa v1.1.0 [28d598bf] BGZFStreams v0.3.2 [47718e42] BioGenerics v0.1.5 [e1450e63] BufferedStreams v1.2.2 [336ed68f] CSV v0.10.15 [944b1d66] CodecZlib v0.7.8 [861a8166] Combinatorics v1.1.0 [38540f10] CommonSolve v0.2.6 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.123 [ffbed154] DocStringExtensions v0.9.5 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.16.0 [34004b35] HypergeometricFunctions v0.3.28 [09f84164] HypothesisTests v0.11.6 [842dd82b] InlineStrings v1.4.5 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [b964fa9f] LaTeXStrings v1.4.0 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.37 [69de0a69] Parsers v2.8.3 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.1 [08abe8d2] PrettyTables v3.1.2 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [189a3867] Reexport v1.2.2 [79098fc4] Rmath v0.9.0 [f2b01f46] Roots v2.2.10 [fdea26ae] SIMD v3.7.2 [91c51154] SentinelArrays v1.4.9 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.6.1 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.10 [4c63d2b9] StatsFuns v1.5.2 [892a3eda] StringManipulation v0.4.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [3bb67fe8] TranscodingStreams v0.11.3 [a620830f] VCFTools v0.2.10 [28eba6e3] VariantCallFormat v0.5.9 [ea10d353] WeakRefStrings v1.4.2 [76eceee3] WorkerUtilities v1.6.1 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [b27032c2] LibCURL v1.0.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.18.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 Testing Running tests... ┌ Warning: The call to compilecache failed to create a usable precompiled cache file for VCFTools [a620830f-fdd7-5ebc-8d26-3621ab35fbfe] │ exception = Required dependency Base.PkgId(Base.UUID("8bb1440f-4735-579b-a4ab-409b98df4dab"), "DelimitedFiles") failed to load from a cache file. └ @ Base loading.jl:2949 Test Summary: | Pass Total Time H-W test | 1 1 3.0s Test Summary: | Pass Total Time openvcf | 4 4 2.0s Test Summary: | Pass Total Time nrecords(vcf) | 1 1 2.0s Test Summary: | Pass Total Time nsamples(vcf) | 1 1 0.0s Test Summary: | Pass Total Time gtstats(record) | 4 4 2.6s ┌ Warning: `Progress(n::Integer, dt::Real, desc::AbstractString = "Progress: ", barlen = nothing, color::Symbol = :green, output::IO = stderr; offset::Integer = 0)` is deprecated, use `Progress(n; dt = dt, desc = desc, barlen = barlen, color = color, output = output, offset = offset)` instead. │ caller = ip:0x0 └ @ Core :-1 Progress: 0%| | ETA: 0:19:44 Progress: 100%|█████████████████████████████████████████| Time: 0:00:02 11.010202 seconds (8.95 M allocations: 541.763 MiB, 7.26% gc time, 90.44% compilation time: 16% of which was recompilation) 0.428046 seconds (2.37 M allocations: 141.360 MiB, 9.40% gc time, 15.22% compilation time: <1% of which was recompilation) Progress: 0%| | ETA: 0:21:39 Progress: 100%|█████████████████████████████████████████| Time: 0:00:02 2.351164 seconds (3.89 M allocations: 236.183 MiB, 3.11% gc time, 81.59% compilation time) 0.426584 seconds (2.37 M allocations: 141.117 MiB, 3.57% gc time) Test Summary: | Pass Total Time gtstats(vcf) | 12 12 17.4s Test Summary: | Pass Total Time get sampleID | 4 4 0.1s Test Summary: | Pass Total Time Fishers exact HWE test | 20 20 0.0s Test Summary: | Pass Total Time filter_genotype(record) | 9 9 1.4s Test Summary: | Pass Total Time filter_genotype(file) | 4068 4068 2.1s Test Summary: | Pass Total Time flip_gt_allele | 4 4 0.8s Test Summary: | Pass Total Time match_gt_allele | 4 4 0.1s Test Summary: | Pass Total Time binomial_proportion_test | 2 2 1.8s [ Info: Scan IDs in reference panel Progress: 0%| | ETA: 0:18:11 Progress: 0%|▏ | ETA: 0:21:53 Progress: 0%|▏ | ETA: 0:19:46 Progress: 0%|▏ | ETA: 0:18:46 Progress: 1%|▎ | ETA: 0:18:01 Progress: 1%|▎ | ETA: 0:19:18 Progress: 1%|▎ | ETA: 0:18:59 Progress: 1%|▍ | ETA: 0:18:44 Progress: 1%|▍ | ETA: 0:18:42 Progress: 1%|▍ | ETA: 0:18:40 Progress: 1%|▌ | ETA: 0:19:35 Progress: 1%|▌ | ETA: 0:19:33 Progress: 1%|▌ | ETA: 0:19:26 Progress: 1%|▌ | ETA: 0:19:23 Progress: 1%|▋ | ETA: 0:19:17 Progress: 2%|▋ | ETA: 0:19:08 Progress: 2%|▋ | ETA: 0:19:33 Progress: 2%|▊ | ETA: 0:19:28 Progress: 2%|▊ | ETA: 0:19:24 Progress: 2%|▊ | ETA: 0:19:15 Progress: 2%|▉ | ETA: 0:19:05 Progress: 2%|▉ | ETA: 0:19:26 Progress: 2%|▉ | ETA: 0:19:25 Progress: 2%|█ | ETA: 0:19:12 Progress: 2%|█ | ETA: 0:18:57 Progress: 3%|█ | ETA: 0:18:43 Progress: 3%|█▏ | ETA: 0:18:53 Progress: 3%|█▏ | ETA: 0:18:43 Progress: 3%|█▏ | ETA: 0:18:36 Progress: 3%|█▎ | ETA: 0:18:26 Progress: 3%|█▎ | ETA: 0:18:39 Progress: 3%|█▎ | ETA: 0:18:37 Progress: 3%|█▍ | ETA: 0:18:34 Progress: 3%|█▍ | ETA: 0:18:32 Progress: 3%|█▍ | ETA: 0:18:29 Progress: 4%|█▌ | ETA: 0:18:20 Progress: 4%|█▌ | ETA: 0:18:24 Progress: 4%|█▌ | ETA: 0:18:19 Progress: 4%|█▋ | ETA: 0:18:17 Progress: 4%|█▋ | ETA: 0:18:14 Progress: 4%|█▋ | ETA: 0:18:11 Progress: 4%|█▊ | ETA: 0:18:22 Progress: 4%|█▊ | ETA: 0:18:24 Progress: 4%|█▊ | ETA: 0:18:22 Progress: 4%|█▉ | ETA: 0:18:21 Progress: 5%|█▉ | ETA: 0:18:17 Progress: 5%|█▉ | ETA: 0:18:13 Progress: 5%|█▉ | ETA: 0:18:24 Progress: 5%|██ | ETA: 0:18:25 Progress: 5%|██ | ETA: 0:18:25 Progress: 5%|██ | ETA: 0:18:22 Progress: 5%|██▏ | ETA: 0:18:15 Progress: 5%|██▏ | ETA: 0:18:18 Progress: 5%|██▏ | ETA: 0:18:15 Progress: 5%|██▎ | ETA: 0:18:13 Progress: 5%|██▎ | ETA: 0:18:10 Progress: 6%|██▎ | ETA: 0:18:07 Progress: 6%|██▍ | ETA: 0:18:05 Progress: 6%|██▍ | ETA: 0:18:12 Progress: 6%|██▍ | ETA: 0:18:10 Progress: 6%|██▌ | ETA: 0:18:08 Progress: 6%|██▌ | ETA: 0:18:05 Progress: 6%|██▌ | ETA: 0:18:02 Progress: 6%|██▌ | ETA: 0:18:06 Progress: 6%|██▋ | ETA: 0:18:02 Progress: 6%|██▋ | ETA: 0:17:59 Progress: 7%|██▊ | ETA: 0:17:56 Progress: 7%|██▊ | ETA: 0:17:53 Progress: 7%|██▊ | ETA: 0:17:59 Progress: 7%|██▊ | ETA: 0:17:58 Progress: 7%|██▉ | ETA: 0:17:55 Progress: 7%|██▉ | ETA: 0:17:52 Progress: 7%|██▉ | ETA: 0:17:49 Progress: 7%|███ | ETA: 0:17:54 Progress: 7%|███ | ETA: 0:17:52 Progress: 7%|███ | ETA: 0:17:49 Progress: 8%|███▏ | ETA: 0:17:47 Progress: 8%|███▏ | ETA: 0:17:45 Progress: 8%|███▏ | ETA: 0:17:43 Progress: 8%|███▎ | ETA: 0:17:48 Progress: 8%|███▎ | ETA: 0:17:47 Progress: 8%|███▎ | ETA: 0:17:44 Progress: 8%|███▍ | ETA: 0:17:41 Progress: 8%|███▍ | ETA: 0:17:38 Progress: 8%|███▍ | ETA: 0:17:36 Progress: 8%|███▍ | ETA: 0:17:39 Progress: 8%|███▌ | ETA: 0:17:36 Progress: 9%|███▌ | ETA: 0:17:33 Progress: 9%|███▋ | ETA: 0:17:30 Progress: 9%|███▋ | ETA: 0:17:27 Progress: 9%|███▋ | ETA: 0:17:30 Progress: 9%|███▋ | ETA: 0:17:28 Progress: 9%|███▊ | ETA: 0:17:26 Progress: 9%|███▊ | ETA: 0:17:24 Progress: 9%|███▊ | ETA: 0:17:22 Progress: 9%|███▉ | ETA: 0:17:24 Progress: 9%|███▉ | ETA: 0:17:23 Progress: 10%|███▉ | ETA: 0:17:20 Progress: 10%|████ | ETA: 0:17:18 Progress: 10%|████ | ETA: 0:17:15 Progress: 10%|████ | ETA: 0:17:17 Progress: 10%|████▏ | ETA: 0:17:16 Progress: 10%|████▏ | ETA: 0:17:13 Progress: 10%|████▏ | ETA: 0:17:11 Progress: 10%|████▎ | ETA: 0:17:10 Progress: 100%|█████████████████████████████████████████| Time: 0:01:58 [ Info: Match target IDs to reference IDs Progress: 0%| | ETA: 20:47:43 Progress: 19%|███████▉ | ETA: 0:07:46 Progress: 38%|███████████████▊ | ETA: 0:03:02 Progress: 59%|████████████████████████ | ETA: 0:01:21 Progress: 81%|█████████████████████████████████▎ | ETA: 0:00:27 Progress: 100%|█████████████████████████████████████████| Time: 0:01:56 [ Info: 823 records are matched 246.010727 seconds (2.01 G allocations: 106.138 GiB, 14.11% gc time, 0.42% compilation time: 7% of which was recompilation) [ Info: Scan IDs in reference panel Progress: 0%| | ETA: 0:17:01 Progress: 0%|▏ | ETA: 0:21:08 Progress: 0%|▏ | ETA: 0:19:57 Progress: 0%|▏ | ETA: 0:19:16 Progress: 0%|▎ | ETA: 0:18:49 Progress: 1%|▎ | ETA: 0:18:26 Progress: 1%|▎ | ETA: 0:19:10 Progress: 1%|▍ | ETA: 0:19:02 Progress: 1%|▍ | ETA: 0:18:46 Progress: 1%|▍ | ETA: 0:18:33 Progress: 1%|▌ | ETA: 0:18:19 Progress: 1%|▌ | ETA: 0:18:35 Progress: 1%|▌ | ETA: 0:18:17 Progress: 1%|▋ | ETA: 0:18:06 Progress: 1%|▋ | ETA: 0:18:01 Progress: 2%|▋ | ETA: 0:17:57 Progress: 2%|▊ | ETA: 0:17:53 Progress: 2%|▊ | ETA: 0:18:20 Progress: 2%|▊ | ETA: 0:18:13 Progress: 2%|▉ | ETA: 0:18:06 Progress: 2%|▉ | ETA: 0:17:59 Progress: 2%|▉ | ETA: 0:17:53 Progress: 2%|▉ | ETA: 0:18:11 Progress: 2%|█ | ETA: 0:18:09 Progress: 2%|█ | ETA: 0:18:03 Progress: 3%|█ | ETA: 0:18:00 Progress: 3%|█▏ | ETA: 0:17:56 Progress: 3%|█▏ | ETA: 0:18:12 Progress: 3%|█▏ | ETA: 0:18:10 Progress: 3%|█▎ | ETA: 0:18:05 Progress: 3%|█▎ | ETA: 0:18:01 Progress: 3%|█▎ | ETA: 0:17:59 Progress: 3%|█▍ | ETA: 0:17:56 Progress: 3%|█▍ | ETA: 0:18:05 Progress: 3%|█▍ | ETA: 0:18:06 Progress: 4%|█▌ | ETA: 0:18:03 Progress: 4%|█▌ | ETA: 0:17:59 Progress: 4%|█▌ | ETA: 0:17:54 Progress: 4%|█▋ | ETA: 0:18:07 Progress: 4%|█▋ | ETA: 0:18:08 Progress: 4%|█▋ | ETA: 0:18:04 Progress: 4%|█▊ | ETA: 0:17:59 Progress: 4%|█▊ | ETA: 0:17:57 Progress: 4%|█▊ | ETA: 0:17:54 Progress: 4%|█▊ | ETA: 0:18:04 Progress: 5%|█▉ | ETA: 0:17:56 Progress: 5%|█▉ | ETA: 0:17:47 Progress: 5%|██ | ETA: 0:17:39 Progress: 5%|██ | ETA: 0:17:40 Progress: 5%|██ | ETA: 0:17:34 Progress: 5%|██▏ | ETA: 0:17:26 Progress: 5%|██▏ | ETA: 0:17:19 Progress: 5%|██▎ | ETA: 0:17:12 Progress: 5%|██▎ | ETA: 0:17:16 Progress: 6%|██▎ | ETA: 0:17:09 Progress: 6%|██▍ | ETA: 0:17:03 Progress: 6%|██▍ | ETA: 0:17:00 Progress: 6%|██▍ | ETA: 0:17:05 Progress: 6%|██▌ | ETA: 0:17:04 Progress: 6%|██▌ | ETA: 0:17:01 Progress: 6%|██▌ | ETA: 0:16:57 Progress: 6%|██▋ | ETA: 0:16:54 Progress: 6%|██▋ | ETA: 0:16:59 Progress: 7%|██▋ | ETA: 0:16:57 Progress: 7%|██▊ | ETA: 0:16:54 Progress: 7%|██▊ | ETA: 0:16:53 Progress: 7%|██▊ | ETA: 0:16:51 Progress: 7%|██▉ | ETA: 0:16:49 Progress: 7%|██▉ | ETA: 0:16:56 Progress: 7%|██▉ | ETA: 0:16:55 Progress: 7%|███ | ETA: 0:16:52 Progress: 7%|███ | ETA: 0:16:49 Progress: 7%|███ | ETA: 0:16:47 Progress: 8%|███▏ | ETA: 0:16:52 Progress: 8%|███▏ | ETA: 0:16:52 Progress: 8%|███▏ | ETA: 0:16:50 Progress: 8%|███▎ | ETA: 0:16:48 Progress: 8%|███▎ | ETA: 0:16:46 Progress: 8%|███▎ | ETA: 0:16:44 Progress: 8%|███▍ | ETA: 0:16:49 Progress: 8%|███▍ | ETA: 0:16:48 Progress: 8%|███▍ | ETA: 0:16:45 Progress: 8%|███▌ | ETA: 0:16:41 Progress: 9%|███▌ | ETA: 0:16:42 Progress: 9%|███▌ | ETA: 0:16:39 Progress: 9%|███▋ | ETA: 0:16:36 Progress: 9%|███▋ | ETA: 0:16:34 Progress: 9%|███▊ | ETA: 0:16:30 Progress: 9%|███▊ | ETA: 0:16:34 Progress: 9%|███▊ | ETA: 0:16:33 Progress: 9%|███▉ | ETA: 0:16:32 Progress: 9%|███▉ | ETA: 0:16:31 Progress: 9%|███▉ | ETA: 0:16:30 Progress: 10%|████ | ETA: 0:16:31 Progress: 10%|████ | ETA: 0:16:30 Progress: 10%|████ | ETA: 0:16:28 Progress: 10%|████ | ETA: 0:16:26 Progress: 10%|████▏ | ETA: 0:16:24 Progress: 10%|████▏ | ETA: 0:16:27 Progress: 10%|████▏ | ETA: 0:16:25 Progress: 10%|████▎ | ETA: 0:16:23 Progress: 100%|█████████████████████████████████████████| Time: 0:01:53 [ Info: Match target IDs to reference IDs Progress: 0%| | ETA: 20:36:29 Progress: 21%|████████▌ | ETA: 0:07:03 Progress: 42%|█████████████████▍ | ETA: 0:02:31 Progress: 64%|██████████████████████████▎ | ETA: 0:01:03 Progress: 85%|███████████████████████████████████ | ETA: 0:00:20 Progress: 100%|█████████████████████████████████████████| Time: 0:01:54 [ Info: 488 records are matched 238.342212 seconds (2.01 G allocations: 106.120 GiB, 14.50% gc time, 0.26% compilation time) [ Info: Scan IDs in reference panel Progress: 0%| | ETA: 0:16:28 Progress: 0%|▏ | ETA: 0:20:57 Progress: 0%|▏ | ETA: 0:19:16 Progress: 0%|▏ | ETA: 0:18:26 Progress: 1%|▎ | ETA: 0:18:01 Progress: 1%|▎ | ETA: 0:19:12 Progress: 1%|▎ | ETA: 0:18:54 Progress: 1%|▍ | ETA: 0:18:26 Progress: 1%|▍ | ETA: 0:18:05 Progress: 1%|▍ | ETA: 0:17:49 Progress: 1%|▌ | ETA: 0:18:25 Progress: 1%|▌ | ETA: 0:18:18 Progress: 1%|▌ | ETA: 0:18:05 Progress: 1%|▋ | ETA: 0:17:52 Progress: 2%|▋ | ETA: 0:17:47 Progress: 2%|▋ | ETA: 0:18:10 Progress: 2%|▊ | ETA: 0:18:06 Progress: 2%|▊ | ETA: 0:17:57 Progress: 2%|▊ | ETA: 0:17:48 Progress: 2%|▉ | ETA: 0:17:40 Progress: 2%|▉ | ETA: 0:17:56 Progress: 2%|▉ | ETA: 0:17:51 Progress: 2%|█ | ETA: 0:17:43 Progress: 2%|█ | ETA: 0:17:36 Progress: 3%|█ | ETA: 0:17:30 Progress: 3%|█▏ | ETA: 0:17:45 Progress: 3%|█▏ | ETA: 0:17:40 Progress: 3%|█▏ | ETA: 0:17:36 Progress: 3%|█▎ | ETA: 0:17:32 Progress: 3%|█▎ | ETA: 0:17:28 Progress: 3%|█▎ | ETA: 0:17:40 Progress: 3%|█▍ | ETA: 0:17:37 Progress: 3%|█▍ | ETA: 0:17:32 Progress: 3%|█▍ | ETA: 0:17:29 Progress: 4%|█▌ | ETA: 0:17:27 Progress: 4%|█▌ | ETA: 0:17:38 Progress: 4%|█▌ | ETA: 0:17:34 Progress: 4%|█▋ | ETA: 0:17:29 Progress: 4%|█▋ | ETA: 0:17:25 Progress: 4%|█▋ | ETA: 0:17:21 Progress: 4%|█▊ | ETA: 0:17:30 Progress: 4%|█▊ | ETA: 0:17:26 Progress: 4%|█▊ | ETA: 0:17:24 Progress: 5%|█▉ | ETA: 0:17:20 Progress: 5%|█▉ | ETA: 0:17:16 Progress: 5%|█▉ | ETA: 0:17:24 Progress: 5%|██ | ETA: 0:17:22 Progress: 5%|██ | ETA: 0:17:18 Progress: 5%|██ | ETA: 0:17:15 Progress: 5%|██▏ | ETA: 0:17:12 Progress: 5%|██▏ | ETA: 0:17:18 Progress: 5%|██▏ | ETA: 0:17:16 Progress: 5%|██▎ | ETA: 0:17:13 Progress: 6%|██▎ | ETA: 0:17:10 Progress: 6%|██▎ | ETA: 0:17:07 Progress: 6%|██▍ | ETA: 0:17:14 Progress: 6%|██▍ | ETA: 0:17:14 Progress: 6%|██▍ | ETA: 0:17:10 Progress: 6%|██▌ | ETA: 0:17:07 Progress: 6%|██▌ | ETA: 0:17:04 Progress: 6%|██▌ | ETA: 0:17:09 Progress: 6%|██▋ | ETA: 0:17:07 Progress: 6%|██▋ | ETA: 0:17:03 Progress: 7%|██▋ | ETA: 0:17:00 Progress: 7%|██▊ | ETA: 0:16:57 Progress: 7%|██▊ | ETA: 0:17:02 Progress: 7%|██▊ | ETA: 0:17:00 Progress: 7%|██▉ | ETA: 0:16:57 Progress: 7%|██▉ | ETA: 0:16:55 Progress: 7%|██▉ | ETA: 0:16:52 Progress: 7%|███ | ETA: 0:16:55 Progress: 7%|███ | ETA: 0:16:55 Progress: 7%|███ | ETA: 0:16:53 Progress: 8%|███▏ | ETA: 0:16:51 Progress: 8%|███▏ | ETA: 0:16:49 Progress: 8%|███▏ | ETA: 0:16:47 Progress: 8%|███▎ | ETA: 0:16:50 Progress: 8%|███▎ | ETA: 0:16:48 Progress: 8%|███▎ | ETA: 0:16:45 Progress: 8%|███▍ | ETA: 0:16:43 Progress: 8%|███▍ | ETA: 0:16:41 Progress: 8%|███▍ | ETA: 0:16:45 Progress: 8%|███▌ | ETA: 0:16:42 Progress: 9%|███▌ | ETA: 0:16:40 Progress: 9%|███▌ | ETA: 0:16:37 Progress: 9%|███▋ | ETA: 0:16:34 Progress: 9%|███▋ | ETA: 0:16:37 Progress: 9%|███▋ | ETA: 0:16:35 Progress: 9%|███▊ | ETA: 0:16:32 Progress: 9%|███▊ | ETA: 0:16:29 Progress: 9%|███▊ | ETA: 0:16:32 Progress: 9%|███▉ | ETA: 0:16:30 Progress: 9%|███▉ | ETA: 0:16:28 Progress: 10%|████ | ETA: 0:16:25 Progress: 10%|████ | ETA: 0:16:22 Progress: 10%|████ | ETA: 0:16:24 Progress: 10%|████▏ | ETA: 0:16:23 Progress: 10%|████▏ | ETA: 0:16:21 Progress: 10%|████▏ | ETA: 0:16:19 Progress: 10%|████▎ | ETA: 0:16:16 Progress: 10%|████▎ | ETA: 0:16:18 Progress: 100%|█████████████████████████████████████████| Time: 0:01:52 [ Info: Match target IDs to reference IDs Progress: 0%| | ETA: 19:43:43 Progress: 22%|█████████▏ | ETA: 0:06:13 Progress: 46%|██████████████████▉ | ETA: 0:02:06 Progress: 73%|██████████████████████████████ | ETA: 0:00:40 Progress: 99%|████████████████████████████████████████▋| ETA: 0:00:01 Progress: 100%|█████████████████████████████████████████| Time: 0:01:49 [ Info: 0 records are matched 232.672936 seconds (2.01 G allocations: 106.120 GiB, 14.58% gc time, 0.30% compilation time) Test Summary: | Pass Total Time conformgt_by_id | 1649 1649 12m03.5s [ Info: Match target POS to reference POS Progress: 0%| | ETA: 17:58:38 Progress: 12%|█████ | ETA: 0:11:28 Progress: 33%|█████████████▋ | ETA: 0:03:17 Progress: 58%|███████████████████████▊ | ETA: 0:01:12 Progress: 82%|█████████████████████████████████▊ | ETA: 0:00:22 Progress: 100%|█████████████████████████████████████████| Time: 0:01:40 [ Info: 833 records are matched 109.959358 seconds (1.02 G allocations: 53.885 GiB, 12.87% gc time, 0.34% compilation time) [ Info: Match target POS to reference POS Progress: 0%| | ETA: 18:11:00 Progress: 23%|█████████▌ | ETA: 0:05:24 Progress: 44%|██████████████████▏ | ETA: 0:02:06 Progress: 69%|████████████████████████████▎ | ETA: 0:00:45 Progress: 94%|██████████████████████████████████████▍ | ETA: 0:00:07 Progress: 100%|█████████████████████████████████████████| Time: 0:01:41 [ Info: 493 records are matched 111.210002 seconds (1.02 G allocations: 53.885 GiB, 13.10% gc time, 0.43% compilation time) [ Info: Match target POS to reference POS Progress: 0%| | ETA: 20:06:40 Progress: 19%|███████▉ | ETA: 0:07:31 Progress: 38%|███████████████▋ | ETA: 0:02:58 Progress: 60%|████████████████████████▊ | ETA: 0:01:13 Progress: 83%|█████████████████████████████████▉ | ETA: 0:00:24 Progress: 100%|█████████████████████████████████████████| Time: 0:01:53 [ Info: 0 records are matched 122.653368 seconds (1.02 G allocations: 53.884 GiB, 12.71% gc time, 0.36% compilation time) Test Summary: | Pass Total Time conformgt_by_pos | 2502 2502 5m45.8s 1.085547 seconds (1.14 M allocations: 65.235 MiB, 84.71% compilation time) 0.759750 seconds (1.05 M allocations: 62.207 MiB, 79.28% compilation time) 0.968887 seconds (1.05 M allocations: 61.236 MiB, 80.13% compilation time) 0.322122 seconds (174.71 k allocations: 10.089 MiB, 99.94% compilation time) 0.011135 seconds (6.05 k allocations: 389.039 KiB, 96.71% compilation time) 0.009220 seconds (2.62 k allocations: 164.695 KiB, 95.98% compilation time) Test Summary: | Pass Total Time convert_gt(vcfile) | 11 11 7.3s 0.787775 seconds (950.48 k allocations: 56.080 MiB, 7.24% gc time, 70.98% compilation time) 0.677653 seconds (812.55 k allocations: 50.397 MiB, 79.59% compilation time) Test Summary: | Pass Total Time convert_ht(vcfile) | 6 6 4.3s Test Summary: | Pass Total Time convert_ds | 5 5 0.9s 0.104735 seconds (525.04 k allocations: 30.674 MiB, 27.00% gc time, 30.32% compilation time) 0.534570 seconds (624.15 k allocations: 36.950 MiB, 89.12% compilation time) ┌ Warning: Reached end of reader; columns 1357-1400 are set to missing values └ @ VCFTools ~/.julia/packages/VCFTools/IWkMe/src/convert.jl:72 ┌ Warning: Reached end of reader; rows 1357-1400 are set to missing values └ @ VCFTools ~/.julia/packages/VCFTools/IWkMe/src/convert.jl:176 0.042390 seconds (520.58 k allocations: 32.160 MiB) 0.399275 seconds (582.86 k allocations: 36.185 MiB, 5.51% gc time, 81.10% compilation time) ┌ Warning: Reached end of record! Columns 1357-1400 are filled with 0.0s and are NOT haplotypes! └ @ VCFTools ~/.julia/packages/VCFTools/IWkMe/src/convert.jl:414 ┌ Warning: Reached end of record! Rows 1357-1400 are filled with 0.0s and are NOT haplotypes! └ @ VCFTools ~/.julia/packages/VCFTools/IWkMe/src/convert.jl:501 0.101803 seconds (1.56 M allocations: 62.079 MiB, 8.80% compilation time) 1.059072 seconds (1.68 M allocations: 69.747 MiB, 53.89% gc time, 89.87% compilation time) ┌ Warning: Reached end of reader; columns 1357-1400 are set to missing values └ @ VCFTools ~/.julia/packages/VCFTools/IWkMe/src/convert.jl:672 ┌ Warning: Reached end of reader; rows 1357-1400 are set to missing values └ @ VCFTools ~/.julia/packages/VCFTools/IWkMe/src/convert.jl:787 Test Summary: | Pass Total Time convert to transpose functions | 13 13 5.0s Test Summary: | Pass Total Time record info | 14 14 3.5s Test Summary: | Pass Total Time write VCF | 3 3 3.0s 1.881024 seconds (4.73 M allocations: 294.885 MiB, 3.97% gc time, 49.73% compilation time) 0.991068 seconds (2.39 M allocations: 142.675 MiB, 4.70% gc time, 18.29% compilation time) 0.940938 seconds (4.42 M allocations: 276.520 MiB, 5.48% gc time) Test Summary: | Pass Total Time filter by sample/record index | 9 9 6.1s 1.572300 seconds (591.13 k allocations: 33.116 MiB, 1.16% gc time, 23.13% compilation time) Test Summary: | Pass Total Time mask_gt | 5 5 3.4s Test Summary: | Pass Total Time filter_chr | 4 4 1.9s Progress: 0%|▏ | ETA: 0:19:49 Progress: 1%|▍ | ETA: 0:21:06 Progress: 1%|▌ | ETA: 0:20:36 Progress: 2%|▊ | ETA: 0:20:17 Progress: 2%|▉ | ETA: 0:20:03 Progress: 3%|█ | ETA: 0:19:56 Progress: 3%|█▎ | ETA: 0:20:13 Progress: 3%|█▍ | ETA: 0:20:02 Progress: 4%|█▌ | ETA: 0:20:07 Progress: 4%|█▊ | ETA: 0:20:01 Progress: 5%|█▉ | ETA: 0:19:49 Progress: 5%|██▏ | ETA: 0:19:51 Progress: 5%|██▎ | ETA: 0:19:42 Progress: 6%|██▍ | ETA: 0:19:44 Progress: 6%|██▋ | ETA: 0:19:38 Progress: 7%|██▊ | ETA: 0:19:22 Progress: 7%|███ | ETA: 0:19:16 Progress: 8%|███▏ | ETA: 0:19:04 Progress: 8%|███▍ | ETA: 0:19:02 Progress: 9%|███▌ | ETA: 0:18:56 Progress: 9%|███▋ | ETA: 0:18:49 Progress: 9%|███▉ | ETA: 0:18:50 Progress: 10%|████ | ETA: 0:18:44 Progress: 10%|████▏ | ETA: 0:18:36 Progress: 11%|████▍ | ETA: 0:18:35 Progress: 11%|████▌ | ETA: 0:18:28 Progress: 11%|████▊ | ETA: 0:18:27 Progress: 12%|████▉ | ETA: 0:18:20 Progress: 12%|█████ | ETA: 0:18:14 Progress: 13%|█████▎ | ETA: 0:18:12 Progress: 13%|█████▍ | ETA: 0:18:06 Progress: 14%|█████▌ | ETA: 0:18:05 Progress: 14%|█████▊ | ETA: 0:17:59 Progress: 14%|█████▉ | ETA: 0:17:53 Progress: 15%|██████ | ETA: 0:17:48 Progress: 15%|██████▎ | ETA: 0:17:37 Progress: 16%|██████▍ | ETA: 0:17:31 Progress: 16%|██████▋ | ETA: 0:17:25 Progress: 17%|██████▊ | ETA: 0:17:19 Progress: 17%|███████ | ETA: 0:17:15 Progress: 17%|███████▏ | ETA: 0:17:02 Progress: 18%|███████▍ | ETA: 0:16:54 Progress: 18%|███████▌ | ETA: 0:16:45 Progress: 19%|███████▊ | ETA: 0:16:37 Progress: 20%|████████ | ETA: 0:16:18 Progress: 20%|████████▎ | ETA: 0:16:01 Progress: 21%|████████▌ | ETA: 0:15:44 Progress: 21%|████████▊ | ETA: 0:15:33 Progress: 22%|█████████ | ETA: 0:15:26 Progress: 22%|█████████▏ | ETA: 0:15:22 Progress: 23%|█████████▍ | ETA: 0:15:16 Progress: 23%|█████████▌ | ETA: 0:15:11 Progress: 24%|█████████▊ | ETA: 0:15:03 Progress: 24%|█████████▉ | ETA: 0:14:58 Progress: 25%|██████████▏ | ETA: 0:14:52 Progress: 25%|██████████▎ | ETA: 0:14:46 Progress: 26%|██████████▌ | ETA: 0:14:42 Progress: 26%|██████████▋ | ETA: 0:14:36 Progress: 26%|██████████▉ | ETA: 0:14:32 Progress: 27%|███████████ | ETA: 0:14:26 Progress: 27%|███████████▏ | ETA: 0:14:21 Progress: 28%|███████████▍ | ETA: 0:14:15 Progress: 28%|███████████▌ | ETA: 0:14:09 Progress: 29%|███████████▊ | ETA: 0:14:04 Progress: 29%|███████████▉ | ETA: 0:13:59 Progress: 30%|████████████▏ | ETA: 0:13:54 Progress: 30%|████████████▎ | ETA: 0:13:48 Progress: 30%|████████████▌ | ETA: 0:13:44 Progress: 31%|████████████▋ | ETA: 0:13:38 Progress: 31%|████████████▉ | ETA: 0:13:32 Progress: 32%|█████████████ | ETA: 0:13:27 Progress: 32%|█████████████▎ | ETA: 0:13:21 Progress: 33%|█████████████▍ | ETA: 0:13:16 Progress: 33%|█████████████▋ | ETA: 0:13:10 Progress: 34%|█████████████▊ | ETA: 0:13:04 Progress: 34%|██████████████ | ETA: 0:12:59 Progress: 34%|██████████████▏ | ETA: 0:12:53 Progress: 35%|██████████████▍ | ETA: 0:12:49 Progress: 35%|██████████████▌ | ETA: 0:12:42 Progress: 36%|██████████████▊ | ETA: 0:12:37 Progress: 36%|██████████████▉ | ETA: 0:12:32 Progress: 37%|███████████████▏ | ETA: 0:12:27 Progress: 37%|███████████████▎ | ETA: 0:12:21 Progress: 38%|███████████████▌ | ETA: 0:12:15 Progress: 38%|███████████████▋ | ETA: 0:12:10 Progress: 39%|███████████████▉ | ETA: 0:12:04 Progress: 39%|████████████████ | ETA: 0:11:59 Progress: 39%|████████████████▏ | ETA: 0:11:53 Progress: 40%|████████████████▍ | ETA: 0:11:49 Progress: 40%|████████████████▌ | ETA: 0:11:44 Progress: 41%|████████████████▊ | ETA: 0:11:38 Progress: 41%|████████████████▉ | ETA: 0:11:33 Progress: 42%|█████████████████▏ | ETA: 0:11:27 Progress: 42%|█████████████████▎ | ETA: 0:11:22 Progress: 43%|█████████████████▌ | ETA: 0:11:16 Progress: 43%|█████████████████▋ | ETA: 0:11:10 Progress: 44%|█████████████████▉ | ETA: 0:11:05 Progress: 44%|██████████████████ | ETA: 0:11:00 Progress: 44%|██████████████████▎ | ETA: 0:10:55 Progress: 45%|██████████████████▍ | ETA: 0:10:49 Progress: 45%|██████████████████▋ | ETA: 0:10:45 Progress: 46%|██████████████████▊ | ETA: 0:10:39 Progress: 46%|███████████████████ | ETA: 0:10:33 Progress: 47%|███████████████████▏ | ETA: 0:10:28 Progress: 47%|███████████████████▍ | ETA: 0:10:23 Progress: 48%|███████████████████▌ | ETA: 0:10:18 Progress: 48%|███████████████████▊ | ETA: 0:10:12 Progress: 48%|███████████████████▉ | ETA: 0:10:07 Progress: 49%|████████████████████ | ETA: 0:10:02 Progress: 49%|████████████████████▎ | ETA: 0:09:56 Progress: 50%|████████████████████▌ | ETA: 0:09:51 Progress: 50%|████████████████████▋ | ETA: 0:09:45 Progress: 51%|████████████████████▊ | ETA: 0:09:41 Progress: 51%|█████████████████████ | ETA: 0:09:35 Progress: 52%|█████████████████████▏ | ETA: 0:09:30 Progress: 52%|█████████████████████▍ | ETA: 0:09:24 Progress: 53%|█████████████████████▌ | ETA: 0:09:19 Progress: 53%|█████████████████████▊ | ETA: 0:09:14 Progress: 53%|█████████████████████▉ | ETA: 0:09:08 Progress: 54%|██████████████████████▏ | ETA: 0:09:03 Progress: 54%|██████████████████████▎ | ETA: 0:08:57 Progress: 55%|██████████████████████▌ | ETA: 0:08:52 Progress: 55%|██████████████████████▋ | ETA: 0:08:46 Progress: 56%|██████████████████████▉ | ETA: 0:08:41 Progress: 56%|███████████████████████ | ETA: 0:08:36 Progress: 57%|███████████████████████▎ | ETA: 0:08:30 Progress: 57%|███████████████████████▍ | ETA: 0:08:25 Progress: 58%|███████████████████████▋ | ETA: 0:08:19 Progress: 58%|███████████████████████▊ | ETA: 0:08:14 Progress: 58%|████████████████████████ | ETA: 0:08:09 Progress: 59%|████████████████████████▏ | ETA: 0:08:04 Progress: 59%|████████████████████████▎ | ETA: 0:07:59 Progress: 60%|████████████████████████▌ | ETA: 0:07:54 Progress: 60%|████████████████████████▋ | ETA: 0:07:49 Progress: 61%|████████████████████████▉ | ETA: 0:07:43 Progress: 61%|█████████████████████████ | ETA: 0:07:38 Progress: 62%|█████████████████████████▎ | ETA: 0:07:33 Progress: 62%|█████████████████████████▍ | ETA: 0:07:28 Progress: 62%|█████████████████████████▋ | ETA: 0:07:23 Progress: 63%|█████████████████████████▊ | ETA: 0:07:18 Progress: 63%|██████████████████████████ | ETA: 0:07:13 Progress: 64%|██████████████████████████▏ | ETA: 0:07:08 Progress: 64%|██████████████████████████▎ | ETA: 0:07:03 Progress: 65%|██████████████████████████▌ | ETA: 0:06:58 Progress: 65%|██████████████████████████▋ | ETA: 0:06:52 Progress: 65%|██████████████████████████▉ | ETA: 0:06:47 Progress: 66%|███████████████████████████ | ETA: 0:06:42 Progress: 66%|███████████████████████████▎ | ETA: 0:06:37 Progress: 67%|███████████████████████████▍ | ETA: 0:06:32 Progress: 67%|███████████████████████████▌ | ETA: 0:06:26 Progress: 68%|███████████████████████████▊ | ETA: 0:06:21 Progress: 68%|███████████████████████████▉ | ETA: 0:06:15 Progress: 69%|████████████████████████████▏ | ETA: 0:06:10 Progress: 69%|████████████████████████████▎ | ETA: 0:06:05 Progress: 69%|████████████████████████████▌ | ETA: 0:06:00 Progress: 70%|████████████████████████████▋ | ETA: 0:05:54 Progress: 70%|████████████████████████████▉ | ETA: 0:05:49 Progress: 71%|█████████████████████████████ | ETA: 0:05:43 Progress: 71%|█████████████████████████████▎ | ETA: 0:05:38 Progress: 72%|█████████████████████████████▍ | ETA: 0:05:33 Progress: 72%|█████████████████████████████▋ | ETA: 0:05:27 Progress: 73%|█████████████████████████████▊ | ETA: 0:05:22 Progress: 73%|██████████████████████████████ | ETA: 0:05:17 Progress: 74%|██████████████████████████████▏ | ETA: 0:05:12 Progress: 74%|██████████████████████████████▍ | ETA: 0:05:06 Progress: 74%|██████████████████████████████▌ | ETA: 0:05:01 Progress: 75%|██████████████████████████████▊ | ETA: 0:04:56 Progress: 75%|██████████████████████████████▉ | ETA: 0:04:50 Progress: 76%|███████████████████████████████▏ | ETA: 0:04:45 Progress: 76%|███████████████████████████████▎ | ETA: 0:04:39 Progress: 77%|███████████████████████████████▌ | ETA: 0:04:34 Progress: 77%|███████████████████████████████▋ | ETA: 0:04:29 Progress: 78%|███████████████████████████████▉ | ETA: 0:04:23 Progress: 78%|████████████████████████████████ | ETA: 0:04:18 Progress: 78%|████████████████████████████████▏ | ETA: 0:04:13 Progress: 79%|████████████████████████████████▍ | ETA: 0:04:08 Progress: 79%|████████████████████████████████▌ | ETA: 0:04:03 Progress: 80%|████████████████████████████████▊ | ETA: 0:03:57 Progress: 80%|████████████████████████████████▉ | ETA: 0:03:52 Progress: 81%|█████████████████████████████████▏ | ETA: 0:03:47 Progress: 81%|█████████████████████████████████▎ | ETA: 0:03:42 Progress: 82%|█████████████████████████████████▌ | ETA: 0:03:36 Progress: 82%|█████████████████████████████████▋ | ETA: 0:03:31 Progress: 83%|█████████████████████████████████▉ | ETA: 0:03:25 Progress: 83%|██████████████████████████████████ | ETA: 0:03:20 Progress: 83%|██████████████████████████████████▎ | ETA: 0:03:14 Progress: 84%|██████████████████████████████████▍ | ETA: 0:03:09 Progress: 84%|██████████████████████████████████▋ | ETA: 0:03:04 Progress: 85%|██████████████████████████████████▊ | ETA: 0:02:59 Progress: 85%|███████████████████████████████████ | ETA: 0:02:53 Progress: 86%|███████████████████████████████████▏ | ETA: 0:02:48 Progress: 86%|███████████████████████████████████▍ | ETA: 0:02:43 Progress: 87%|███████████████████████████████████▌ | ETA: 0:02:38 Progress: 87%|███████████████████████████████████▊ | ETA: 0:02:32 Progress: 88%|███████████████████████████████████▉ | ETA: 0:02:27 Progress: 88%|████████████████████████████████████▏ | ETA: 0:02:21 Progress: 88%|████████████████████████████████████▎ | ETA: 0:02:16 Progress: 89%|████████████████████████████████████▌ | ETA: 0:02:11 Progress: 89%|████████████████████████████████████▋ | ETA: 0:02:05 Progress: 90%|████████████████████████████████████▊ | ETA: 0:02:00 Progress: 90%|█████████████████████████████████████ | ETA: 0:01:55 Progress: 91%|█████████████████████████████████████▏ | ETA: 0:01:49 Progress: 91%|█████████████████████████████████████▍ | ETA: 0:01:44 Progress: 92%|█████████████████████████████████████▌ | ETA: 0:01:39 Progress: 92%|█████████████████████████████████████▊ | ETA: 0:01:33 Progress: 92%|█████████████████████████████████████▉ | ETA: 0:01:28 Progress: 93%|██████████████████████████████████████▏ | ETA: 0:01:23 Progress: 93%|██████████████████████████████████████▎ | ETA: 0:01:18 Progress: 94%|██████████████████████████████████████▌ | ETA: 0:01:12 Progress: 94%|██████████████████████████████████████▋ | ETA: 0:01:07 Progress: 95%|██████████████████████████████████████▉ | ETA: 0:01:02 Progress: 95%|███████████████████████████████████████ | ETA: 0:00:56 Progress: 96%|███████████████████████████████████████▎ | ETA: 0:00:51 Progress: 96%|███████████████████████████████████████▍ | ETA: 0:00:46 Progress: 97%|███████████████████████████████████████▋ | ETA: 0:00:40 Progress: 97%|███████████████████████████████████████▊ | ETA: 0:00:35 Progress: 97%|████████████████████████████████████████ | ETA: 0:00:30 Progress: 98%|████████████████████████████████████████▏| ETA: 0:00:24 Progress: 98%|████████████████████████████████████████▍| ETA: 0:00:19 Progress: 99%|████████████████████████████████████████▌| ETA: 0:00:14 Progress: 99%|████████████████████████████████████████▊| ETA: 0:00:08 Progress: 99%|████████████████████████████████████████▉| ETA: 0:00:03 Progress: 100%|█████████████████████████████████████████| Time: 0:19:33 Test Summary: | Pass Total Time AIM selection | 4 4 20m09.5s Test Summary: | Pass Total Time grm | 11 11 8.7s Testing VCFTools tests passed Testing completed after 2398.12s PkgEval succeeded after 2471.69s