Package evaluation to test GenomicOffsets on Julia 1.14.0-DEV.1601 (79ea5eb99c*) started at 2026-01-24T16:42:48.972 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 9.64s ################################################################################ # Installation # Installing GenomicOffsets... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [496adb70] + GenomicOffsets v0.2.1 Updating `~/.julia/environments/v1.14/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [7d9fca2a] + Arpack v0.5.4 [13072b0f] + AxisAlgorithms v1.1.0 [d360d2e6] + ChainRulesCore v1.26.0 [861a8166] + Combinatorics v1.1.0 [34da2185] + Compat v4.18.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.3 [7806a523] + DecisionTree v0.12.4 [8bb1440f] + DelimitedFiles v1.9.1 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [b86e33f2] + FFTA v0.3.1 [442a2c76] + FastGaussQuadrature v1.1.0 [1a297f60] + FillArrays v1.16.0 [92c85e6c] + GSL v1.0.1 [496adb70] + GenomicOffsets v0.2.1 [34004b35] + HypergeometricFunctions v0.3.28 [18e54dd8] + IntegerMathUtils v0.1.3 ⌅ [a98d9a8b] + Interpolations v0.15.1 [92d709cd] + IrrationalConstants v0.2.6 [692b3bcd] + JLLWrappers v1.7.1 [5ab0869b] + KernelDensity v0.6.11 [2ab3a3ac] + LogExpFunctions v0.3.29 [e1d29d7a] + Missings v1.2.0 [46d2c3a1] + MuladdMacro v0.2.4 [f8716d33] + MultipleTesting v0.6.0 [6f286f6a] + MultivariateStats v0.10.3 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [27ebfcd6] + Primes v0.5.7 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [2576dda1] + RandomMatrices v0.5.6 [c84ed2f1] + Ratios v0.4.5 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [6e75b9c4] + ScikitLearnBase v0.5.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [efce3f68] + WoodburyMatrices v1.1.0 ⌅ [68821587] + Arpack_jll v3.5.2+0 [1b77fbbe] + GSL_jll v2.8.1+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 4.92s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 6776.4 ms ✓ KernelDensity 7106.0 ms ✓ RandomMatrices WARNING: Constructor for type "TracyWidom" was extended in `GenomicOffsets` without explicit qualification or import.  NOTE: Assumed "TracyWidom" refers to `RandomMatrices.TracyWidom`. This behavior is deprecated and may differ in future versions.  NOTE: This behavior may have differed in Julia versions prior to 1.12.  Hint: If you intended to create a new generic function of the same name, use `function TracyWidom end`.  Hint: To silence the warning, qualify `TracyWidom` as `RandomMatrices.TracyWidom` in the method signature or explicitly `import RandomMatrices: TracyWidom`. 7870.9 ms ✓ GenomicOffsets 3 dependencies successfully precompiled in 24 seconds. 95 already precompiled. 1 dependency had output during precompilation: ┌ GenomicOffsets │ WARNING: Constructor for type "TracyWidom" was extended in `GenomicOffsets` without explicit qualification or import. │ NOTE: Assumed "TracyWidom" refers to `RandomMatrices.TracyWidom`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function TracyWidom end`. │ Hint: To silence the warning, qualify `TracyWidom` as `RandomMatrices.TracyWidom` in the method signature or explicitly `import RandomMatrices: TracyWidom`. └ Precompilation completed after 41.03s ################################################################################ # Testing # Testing GenomicOffsets Status `/tmp/jl_Fmx835/Project.toml` [7806a523] DecisionTree v0.12.4 [31c24e10] Distributions v0.25.123 [496adb70] GenomicOffsets v0.2.1 ⌅ [a98d9a8b] Interpolations v0.15.1 [5ab0869b] KernelDensity v0.6.11 [f8716d33] MultipleTesting v0.6.0 [6f286f6a] MultivariateStats v0.10.3 [2576dda1] RandomMatrices v0.5.6 [10745b16] Statistics v1.11.1 [2913bbd2] StatsBase v0.34.10 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [9e88b42a] Serialization v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_Fmx835/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [7d9fca2a] Arpack v0.5.4 [13072b0f] AxisAlgorithms v1.1.0 [d360d2e6] ChainRulesCore v1.26.0 [861a8166] Combinatorics v1.1.0 [34da2185] Compat v4.18.1 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.3 [7806a523] DecisionTree v0.12.4 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.123 [ffbed154] DocStringExtensions v0.9.5 [b86e33f2] FFTA v0.3.1 [442a2c76] FastGaussQuadrature v1.1.0 [1a297f60] FillArrays v1.16.0 [92c85e6c] GSL v1.0.1 [496adb70] GenomicOffsets v0.2.1 [34004b35] HypergeometricFunctions v0.3.28 [18e54dd8] IntegerMathUtils v0.1.3 ⌅ [a98d9a8b] Interpolations v0.15.1 [92d709cd] IrrationalConstants v0.2.6 [692b3bcd] JLLWrappers v1.7.1 [5ab0869b] KernelDensity v0.6.11 [2ab3a3ac] LogExpFunctions v0.3.29 [e1d29d7a] Missings v1.2.0 [46d2c3a1] MuladdMacro v0.2.4 [f8716d33] MultipleTesting v0.6.0 [6f286f6a] MultivariateStats v0.10.3 [6fe1bfb0] OffsetArrays v1.17.0 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.37 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.1 [27ebfcd6] Primes v0.5.7 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [2576dda1] RandomMatrices v0.5.6 [c84ed2f1] Ratios v0.4.5 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [6e75b9c4] ScikitLearnBase v0.5.0 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.6.1 [90137ffa] StaticArrays v1.9.16 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.10 [4c63d2b9] StatsFuns v1.5.2 [efce3f68] WoodburyMatrices v1.1.0 ⌅ [68821587] Arpack_jll v3.5.2+0 [1b77fbbe] GSL_jll v2.8.1+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [8e850b90] libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... WARNING: Constructor for type "TracyWidom" was extended in `GenomicOffsets` without explicit qualification or import.  NOTE: Assumed "TracyWidom" refers to `RandomMatrices.TracyWidom`. This behavior is deprecated and may differ in future versions.  NOTE: This behavior may have differed in Julia versions prior to 1.12.  Hint: If you intended to create a new generic function of the same name, use `function TracyWidom end`.  Hint: To silence the warning, qualify `TracyWidom` as `RandomMatrices.TracyWidom` in the method signature or explicitly `import RandomMatrices: TracyWidom`. 1 dependency had output during precompilation: ┌ GenomicOffsets │ [Output was shown above] └ Test Summary: | Pass Total Time GenomicOffsets.jl | 33 33 23m10.3s Testing GenomicOffsets tests passed Testing completed after 1422.85s PkgEval succeeded after 1495.78s