Package evaluation to test MITgcm on Julia 1.14.0-DEV.1589 (2d9a3f8a61*) started at 2026-01-21T13:52:40.175 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 10.36s ################################################################################ # Installation # Installing MITgcm... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [dce5fa8e] + MITgcm v0.5.14 Updating `~/.julia/environments/v1.14/Manifest.toml` [1520ce14] + AbstractTrees v0.4.5 [d1d4a3ce] + BitFlags v0.1.9 [179af706] + CFTime v0.2.5 [336ed68f] + CSV v0.10.15 [81a5f4ea] + CatViews v1.0.0 [0b6fb165] + ChunkCodecCore v1.0.1 [4c0bbee4] + ChunkCodecLibZlib v1.0.0 [55437552] + ChunkCodecLibZstd v1.0.0 [f6adb021] + ClimateModels v0.3.15 [944b1d66] + CodecZlib v0.7.8 [34da2185] + Compat v4.18.1 [f0e56b4a] + ConcurrentUtilities v2.5.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [124859b0] + DataDeps v0.7.13 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [9c0b9be8] + Dataverse v0.2.7 [b4f34e82] + Distances v0.10.12 [460bff9d] + ExceptionUnwrapping v0.1.11 [411431e0] + Extents v0.1.6 [5789e2e9] + FileIO v1.17.1 [48062228] + FilePathsBase v0.9.24 [c58ffaec] + FortranFiles v0.6.2 [68eda718] + GeoFormatTypes v0.4.5 [cf35fbd7] + GeoInterface v1.6.0 [d7ba0133] + Git v1.5.0 [c27321d9] + Glob v1.4.0 [cd3eb016] + HTTP v1.10.19 [076d061b] + HashArrayMappedTries v0.2.0 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [033835bb] + JLD2 v0.6.3 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [b964fa9f] + LaTeXStrings v1.4.0 [e6f89c97] + LoggingExtras v1.2.0 [dce5fa8e] + MITgcm v0.5.14 [1914dd2f] + MacroTools v0.5.16 [739be429] + MbedTLS v1.1.9 [cb8c808f] + MeshArrays v0.5.3 [e1d29d7a] + Missings v1.2.0 [b8a86587] + NearestNeighbors v0.4.26 [6fe1bfb0] + OffsetArrays v1.17.0 [4d8831e6] + OpenSSL v1.6.1 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [08abe8d2] + PrettyTables v3.1.2 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [7e506255] + ScopedValues v1.5.0 [6c6a2e73] + Scratch v1.3.0 [91c51154] + SentinelArrays v1.4.9 [777ac1f9] + SimpleBufferStream v1.2.0 [a2af1166] + SortingAlgorithms v1.2.2 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [892a3eda] + StringManipulation v0.4.2 [fd094767] + Suppressor v0.2.8 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.6.1 [1986cc42] + Unitful v1.27.0 [ea10d353] + WeakRefStrings v1.4.2 [76eceee3] + WorkerUtilities v1.6.1 [a5390f91] + ZipFile v0.10.1 [2e619515] + Expat_jll v2.7.3+0 [020c3dae] + Git_LFS_jll v3.7.0+0 [f8c6e375] + Git_jll v2.52.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [9bd350c2] + OpenSSH_jll v10.2.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.18.0+0 [e37daf67] + LibGit2_jll v1.9.2+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.12.2 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 5.29s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 12306.9 ms ✓ MeshArrays 10636.5 ms ✓ MeshArrays → MeshArraysJLD2Ext 12125.6 ms ✓ MeshArrays → MeshArraysDataDepsExt 29388.9 ms ✓ MITgcm  [pid 53] Waiting for background task / IO / timer to finish:  Handle type uv_handle_t->data  tcp[11] 0x1c713b50->0x76bece2a2b80 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.  [pid 53] Waiting for background task / IO / timer to finish:  Handle type uv_handle_t->data  tcp[11] 0x1c713b50->0x76bece2a2b80 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.  [pid 53] Waiting for background task / IO / timer to finish:  Handle type uv_handle_t->data  tcp[11] 0x1c713b50->0x76bece2a2b80 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.  [pid 53] Waiting for background task / IO / timer to finish:  Handle type uv_handle_t->data  tcp[11] 0x1c713b50->0x76bece2a2b80 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.  [pid 53] Waiting for background task / IO / timer to finish:  Handle type uv_handle_t->data  tcp[11] 0x1c713b50->0x76bece2a2b80 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.  [pid 53] Waiting for background task / IO / timer to finish:  Handle type uv_handle_t->data  tcp[11] 0x1c713b50->0x76bece2a2b80 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.  [pid 53] Waiting for background task / IO / timer to finish:  Handle type uv_handle_t->data  tcp[11] 0x1c713b50->0x76bece2a2b80 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.  [pid 53] Waiting for background task / IO / timer to finish:  Handle type uv_handle_t->data  tcp[11] 0x1c713b50->0x76bece2a2b80 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.  [pid 53] Waiting for background task / IO / timer to finish:  Handle type uv_handle_t->data  tcp[11] 0x1c713b50->0x76bece2a2b80 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.  [pid 53] Waiting for background task / IO / timer to finish:  Handle type uv_handle_t->data  tcp[11] 0x1c713b50->0x76bece2a2b80 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.  [pid 53] Waiting for background task / IO / timer to finish:  Handle type uv_handle_t->data  tcp[11] 0x1c713b50->0x76bece2a2b80 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.  [pid 53] Waiting for background task / IO / timer to finish:  Handle type uv_handle_t->data  tcp[11] 0x1c713b50->0x76bece2a2b80 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.  [pid 53] Waiting for background task / IO / timer to finish:  Handle type uv_handle_t->data  tcp[11] 0x1c713b50->0x76bece2a2b80 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.  [pid 53] Waiting for background task / IO / timer to finish:  Handle type uv_handle_t->data  tcp[11] 0x1c713b50->0x76bece2a2b80 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.  [pid 53] Waiting for background task / IO / timer to finish:  Handle type uv_handle_t->data  tcp[11] 0x1c713b50->0x76bece2a2b80 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.  [pid 53] Waiting for background task / IO / timer to finish:  Handle type uv_handle_t->data  tcp[11] 0x1c713b50->0x76bece2a2b80 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.  [pid 53] Waiting for background task / IO / timer to finish:  Handle type uv_handle_t->data  tcp[11] 0x1c713b50->0x76bece2a2b80 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.  [pid 53] Waiting for background task / IO / timer to finish:  Handle type uv_handle_t->data  tcp[11] 0x1c713b50->0x76bece2a2b80 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.  [pid 53] Waiting for background task / IO / timer to finish:  Handle type uv_handle_t->data  tcp[11] 0x1c713b50->0x76bece2a2b80 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. 392662.5 ms ✓ MITgcm → MITgcmNetCDFExt 5 dependencies successfully precompiled in 465 seconds. 151 already precompiled. 1 dependency had output during precompilation: ┌ MITgcm → MITgcmNetCDFExt │ [pid 53] Waiting for background task / IO / timer to finish: │ Handle type uv_handle_t->data │ tcp[11] 0x1c713b50->0x76bece2a2b80 │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 53] Waiting for background task / IO / timer to finish: │ Handle type uv_handle_t->data │ tcp[11] 0x1c713b50->0x76bece2a2b80 │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 53] Waiting for background task / IO / timer to finish: │ Handle type uv_handle_t->data │ tcp[11] 0x1c713b50->0x76bece2a2b80 │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 53] Waiting for background task / IO / timer to finish: │ Handle type uv_handle_t->data │ tcp[11] 0x1c713b50->0x76bece2a2b80 │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 53] Waiting for background task / IO / timer to finish: │ Handle type uv_handle_t->data │ tcp[11] 0x1c713b50->0x76bece2a2b80 │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 53] Waiting for background task / IO / timer to finish: │ Handle type uv_handle_t->data │ tcp[11] 0x1c713b50->0x76bece2a2b80 │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 53] Waiting for background task / IO / timer to finish: │ Handle type uv_handle_t->data │ tcp[11] 0x1c713b50->0x76bece2a2b80 │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 53] Waiting for background task / IO / timer to finish: │ Handle type uv_handle_t->data │ tcp[11] 0x1c713b50->0x76bece2a2b80 │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 53] Waiting for background task / IO / timer to finish: │ Handle type uv_handle_t->data │ tcp[11] 0x1c713b50->0x76bece2a2b80 │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 53] Waiting for background task / IO / timer to finish: │ Handle type uv_handle_t->data │ tcp[11] 0x1c713b50->0x76bece2a2b80 │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 53] Waiting for background task / IO / timer to finish: │ Handle type uv_handle_t->data │ tcp[11] 0x1c713b50->0x76bece2a2b80 │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 53] Waiting for background task / IO / timer to finish: │ Handle type uv_handle_t->data │ tcp[11] 0x1c713b50->0x76bece2a2b80 │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 53] Waiting for background task / IO / timer to finish: │ Handle type uv_handle_t->data │ tcp[11] 0x1c713b50->0x76bece2a2b80 │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 53] Waiting for background task / IO / timer to finish: │ Handle type uv_handle_t->data │ tcp[11] 0x1c713b50->0x76bece2a2b80 │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 53] Waiting for background task / IO / timer to finish: │ Handle type uv_handle_t->data │ tcp[11] 0x1c713b50->0x76bece2a2b80 │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 53] Waiting for background task / IO / timer to finish: │ Handle type uv_handle_t->data │ tcp[11] 0x1c713b50->0x76bece2a2b80 │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 53] Waiting for background task / IO / timer to finish: │ Handle type uv_handle_t->data │ tcp[11] 0x1c713b50->0x76bece2a2b80 │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 53] Waiting for background task / IO / timer to finish: │ Handle type uv_handle_t->data │ tcp[11] 0x1c713b50->0x76bece2a2b80 │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 53] Waiting for background task / IO / timer to finish: │ Handle type uv_handle_t->data │ tcp[11] 0x1c713b50->0x76bece2a2b80 │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. └ Precompilation completed after 140.86s ################################################################################ # Testing # Testing MITgcm Status `/tmp/jl_ibKgTs/Project.toml` [dce5fa8e] MITgcm v0.5.14 [30363a11] NetCDF v0.12.2 [ade2ca70] Dates v1.11.0 [44cfe95a] Pkg v1.14.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_ibKgTs/Manifest.toml` [1520ce14] AbstractTrees v0.4.5 [d1d4a3ce] BitFlags v0.1.9 [179af706] CFTime v0.2.5 [336ed68f] CSV v0.10.15 [81a5f4ea] CatViews v1.0.0 [0b6fb165] ChunkCodecCore v1.0.1 [4c0bbee4] ChunkCodecLibZlib v1.0.0 [55437552] ChunkCodecLibZstd v1.0.0 [f6adb021] ClimateModels v0.3.15 [944b1d66] CodecZlib v0.7.8 [34da2185] Compat v4.18.1 [f0e56b4a] ConcurrentUtilities v2.5.0 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [124859b0] DataDeps v0.7.13 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [9c0b9be8] Dataverse v0.2.7 [3c3547ce] DiskArrays v0.4.18 [b4f34e82] Distances v0.10.12 [460bff9d] ExceptionUnwrapping v0.1.11 [411431e0] Extents v0.1.6 [5789e2e9] FileIO v1.17.1 [48062228] FilePathsBase v0.9.24 [c58ffaec] FortranFiles v0.6.2 [68eda718] GeoFormatTypes v0.4.5 [cf35fbd7] GeoInterface v1.6.0 [d7ba0133] Git v1.5.0 [c27321d9] Glob v1.4.0 [cd3eb016] HTTP v1.10.19 [076d061b] HashArrayMappedTries v0.2.0 [842dd82b] InlineStrings v1.4.5 [41ab1584] InvertedIndices v1.3.1 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.6.3 [692b3bcd] JLLWrappers v1.7.1 ⌅ [682c06a0] JSON v0.21.4 [8ac3fa9e] LRUCache v1.6.2 [b964fa9f] LaTeXStrings v1.4.0 [e6f89c97] LoggingExtras v1.2.0 [dce5fa8e] MITgcm v0.5.14 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 [739be429] MbedTLS v1.1.9 [cb8c808f] MeshArrays v0.5.3 [e1d29d7a] Missings v1.2.0 [b8a86587] NearestNeighbors v0.4.26 [30363a11] NetCDF v0.12.2 [6fe1bfb0] OffsetArrays v1.17.0 [4d8831e6] OpenSSL v1.6.1 [bac558e1] OrderedCollections v1.8.1 [69de0a69] Parsers v2.8.3 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.1 [08abe8d2] PrettyTables v3.1.2 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [7e506255] ScopedValues v1.5.0 [6c6a2e73] Scratch v1.3.0 [91c51154] SentinelArrays v1.4.9 [777ac1f9] SimpleBufferStream v1.2.0 [a2af1166] SortingAlgorithms v1.2.2 [90137ffa] StaticArrays v1.9.16 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [892a3eda] StringManipulation v0.4.2 [fd094767] Suppressor v0.2.8 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [3bb67fe8] TranscodingStreams v0.11.3 [5c2747f8] URIs v1.6.1 [1986cc42] Unitful v1.27.0 [ea10d353] WeakRefStrings v1.4.2 [76eceee3] WorkerUtilities v1.6.1 [a5390f91] ZipFile v0.10.1 [0b7ba130] Blosc_jll v1.21.7+0 [6e34b625] Bzip2_jll v1.0.9+0 [2e619515] Expat_jll v2.7.3+0 [020c3dae] Git_LFS_jll v3.7.0+0 [f8c6e375] Git_jll v2.52.0+0 ⌅ [0234f1f7] 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have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Sys.islinux=true Sys.isapple=false Sys.iswindows=false Sys.ARCH=x86_64 Download started ... See : /tmp/1ba0b6c2-3097-4b81-990e-50ea6b6c0c8c/input_folder/ and now completed! Download started ... See : /tmp/1ba0b6c2-3097-4b81-990e-50ea6b6c0c8c/input_folder/forcing_baseline2 and now completed! Download started ... See : /tmp/1ba0b6c2-3097-4b81-990e-50ea6b6c0c8c/input_folder/ and now completed! done with monthly Downloading file : /tmp/costfunction0012 Test Summary: | Pass Total Time ECCO4 | 2 2 3m09.0s ┌ Warning: setting environment variable DATADEPS_ALWAYS_ACCEPT to true └ @ MITgcm ~/.julia/packages/MITgcm/dlFMS/src/System.jl:144 ┌ Warning: setting environment variable NETCDF_ROOT to /usr └ @ MITgcm ~/.julia/packages/MITgcm/dlFMS/src/System.jl:144 ┌ Warning: setting environment variable MPI_INC_DIR to /usr/lib/x86_64-linux-gnu/openmpi/include └ @ MITgcm ~/.julia/packages/MITgcm/dlFMS/src/System.jl:144 ┌ Warning: Conversion to OrderedDict is deprecated for unordered associative containers (in this case, Dict{Symbol, Bool}). Use an ordered or sorted associative type, such as SortedDict and OrderedDict. │ caller = MITgcm_config at Types.jl:54 [inlined] └ @ Core ~/.julia/packages/MITgcm/dlFMS/src/Types.jl:54 !! model compilation has failed !! To try and resolve the issue, look at: help?> MITgcm.setenv julia> system_check(setenv=true) MITgcm system check: Error During Test at /home/pkgeval/.julia/packages/MITgcm/dlFMS/test/runtests.jl:59 Got exception outside of a @test SystemError: opening file "/tmp/de163203-c0ae-4202-a05c-6cdd00e77328/MITgcm/verification/advect_xy/build/genmake_state": No such file or directory Stacktrace: [1] systemerror(p::String, errno::Int32; extrainfo::Nothing) @ Base ./error.jl:186 [2] open(fname::String; lock::Bool, read::Nothing, write::Nothing, create::Nothing, truncate::Nothing, append::Nothing) @ Base ./iostream.jl:327 [3] open @ ./iostream.jl:306 [inlined] [4] open(f::Base.var"#350#351"{@Kwargs{}}, args::String; kwargs::@Kwargs{}) @ Base ./io.jl:425 [5] open @ ./io.jl:424 [inlined] [6] #readlines#348 @ ./io.jl:720 [inlined] [7] readlines @ ./io.jl:719 [inlined] [8] scan_build_dir(pth::String, config::String) @ MITgcm ~/.julia/packages/MITgcm/dlFMS/src/ReadFiles.jl:167 [9] scan_build_dir @ ~/.julia/packages/MITgcm/dlFMS/src/ReadFiles.jl:141 [inlined] [10] system_check(; setenv::Bool, exe::String, mpi::Bool, adj::Bool, config::String, opt::String) @ MITgcm ~/.julia/packages/MITgcm/dlFMS/src/System.jl:42 [11] system_check() @ MITgcm ~/.julia/packages/MITgcm/dlFMS/src/System.jl:19 [12] top-level scope @ ~/.julia/packages/MITgcm/dlFMS/test/runtests.jl:60 [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [14] macro expansion @ ~/.julia/packages/MITgcm/dlFMS/test/runtests.jl:70 [inlined] [15] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [16] top-level scope @ none:6 [17] eval(m::Module, e::Any) @ Core ./boot.jl:489 [18] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [19] _start() @ Base ./client.jl:585 Test Summary: | Pass Error Total Time MITgcm system check | 2 1 3 42.6s RNG of the outermost testset: Random.Xoshiro(0xd365db5f86c0bbd3, 0x135e8834299dafe9, 0xbd1e3d0136e6396d, 0x846ae91cbaa8cb21, 0x5e0504cb30b67896) ERROR: LoadError: Some tests did not pass: 2 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/MITgcm/dlFMS/test/runtests.jl:59 Testing failed after 275.14s ERROR: LoadError: Package MITgcm errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3122 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2987 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:585 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 816.2s: package tests unexpectedly errored