Package evaluation to test MCMCTempering on Julia 1.14.0-DEV.1584 (ac5fadde9b*) started at 2026-01-21T13:31:46.381 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 10.93s ################################################################################ # Installation # Installing MCMCTempering... Resolving package versions... Installed CompositionsBase ──────────── v0.1.2 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed DefineSingletons ──────────── v0.1.2 Installed MacroTools ────────────────── v0.5.16 Installed MicroCollections ──────────── v0.1.4 Installed MCMCTempering ─────────────── v0.3.2 Installed DataStructures ────────────── v0.19.3 Installed FFTA ──────────────────────── v0.3.1 Installed Adapt ─────────────────────── v4.4.0 Installed AbstractTrees ─────────────── v0.4.5 Installed HypergeometricFunctions ───── v0.3.28 Installed KernelDensity ─────────────── v0.6.11 Installed AliasTables ───────────────── v1.1.3 Installed FillArrays ────────────────── v1.16.0 Installed ConstructionBase ──────────── v1.6.0 Installed StatsBase ─────────────────── v0.34.10 Installed OrderedCollections ────────── v1.8.1 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed ConsoleProgressMonitor ────── v0.1.2 Installed Compat ────────────────────── v4.18.1 Installed Statistics ────────────────── v1.11.1 Installed DataValueInterfaces ───────── v1.0.0 Installed StatsAPI ──────────────────── v1.8.0 Installed RecipesBase ───────────────── v1.3.4 Installed DataAPI ───────────────────── v1.16.0 Installed OffsetArrays ──────────────── v1.17.0 Installed ProgressLogging ───────────── v0.1.6 Installed InitialValues ─────────────── v0.3.1 Installed PrecompileTools ───────────── v1.3.3 Installed ProgressMeter ─────────────── v1.11.0 Installed ArgCheck ──────────────────── v2.5.0 Installed StaticArraysCore ──────────── v1.4.4 Installed LoggingExtras ─────────────── v1.2.0 Installed ConcreteStructs ───────────── v0.2.3 Installed StaticArrays ──────────────── v1.9.16 Installed ChainRulesCore ────────────── v1.26.0 Installed MCMCDiagnosticTools ───────── v0.3.15 Installed AbstractFFTs ──────────────── v1.5.0 Installed AxisAlgorithms ────────────── v1.1.0 Installed Ratios ────────────────────── v0.4.5 Installed QuadGK ────────────────────── v2.11.2 Installed TerminalLoggers ───────────── v0.1.7 Installed IrrationalConstants ───────── v0.2.6 Installed LogDensityProblems ────────── v2.2.0 Installed BangBang ──────────────────── v0.3.40 Installed IntegerMathUtils ──────────── v0.1.3 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed StringManipulation ────────── v0.4.2 Installed Requires ──────────────────── v1.3.1 Installed LogExpFunctions ───────────── v0.3.29 Installed LeftChildRightSiblingTrees ── v0.2.1 Installed PrettyTables ──────────────── v2.4.0 Installed SplittablesBase ───────────── v0.1.15 Installed Rmath ─────────────────────── v0.9.0 Installed StatsFuns ─────────────────── v1.5.2 Installed MuladdMacro ───────────────── v0.2.4 Installed Distributions ─────────────── v0.25.123 Installed WoodburyMatrices ──────────── v1.1.0 Installed Interpolations ────────────── v0.16.2 Installed Transducers ───────────────── v0.4.80 Installed Tables ────────────────────── v1.12.1 Installed PtrArrays ─────────────────── v1.3.0 Installed AbstractMCMC ──────────────── v4.4.2 Installed InverseFunctions ──────────── v0.1.17 Installed SpecialFunctions ──────────── v2.6.1 Installed Reexport ──────────────────── v1.2.2 Installed IntervalSets ──────────────── v0.7.13 Installed Missings ──────────────────── v1.2.0 Installed Baselet ───────────────────── v0.1.1 Installed ScientificTypesBase ───────── v3.0.0 Installed JLLWrappers ───────────────── v1.7.1 Installed Setfield ──────────────────── v1.1.2 Installed TableTraits ───────────────── v1.0.1 Installed Preferences ───────────────── v1.5.1 Installed LaTeXStrings ──────────────── v1.4.0 Installed Crayons ───────────────────── v4.1.1 Installed Primes ────────────────────── v0.5.7 Installed PDMats ────────────────────── v0.11.37 Installed SortingAlgorithms ─────────── v1.2.2 Installed AxisArrays ────────────────── v0.4.8 Installed MCMCChains ────────────────── v6.0.7 Installed IterTools ─────────────────── v1.10.0 Installed RangeArrays ───────────────── v0.3.2 Installed DocStringExtensions ───────── v0.9.5 Installed NaturalSort ───────────────── v1.0.0 Installed StatisticalTraits ─────────── v3.5.0 Installed MLJModelInterface ─────────── v1.12.1 Installing 2 artifacts Installed artifact OpenSpecFun 194.9 KiB Installed artifact Rmath 121.9 KiB Updating `~/.julia/environments/v1.14/Project.toml` [ce233488] + MCMCTempering v0.3.2 Updating `~/.julia/environments/v1.14/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 ⌅ [80f14c24] + AbstractMCMC v4.4.2 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.8 ⌅ [198e06fe] + BangBang v0.3.40 [9718e550] + Baselet v0.1.1 [d360d2e6] + ChainRulesCore v1.26.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [88cd18e8] + ConsoleProgressMonitor v0.1.2 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [b86e33f2] + FFTA v0.3.1 [1a297f60] + FillArrays v1.16.0 [34004b35] + HypergeometricFunctions v0.3.28 [22cec73e] + InitialValues v0.3.1 [18e54dd8] + IntegerMathUtils v0.1.3 [a98d9a8b] + Interpolations v0.16.2 [8197267c] + IntervalSets v0.7.13 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [5ab0869b] + KernelDensity v0.6.11 [b964fa9f] + LaTeXStrings v1.4.0 [1d6d02ad] + LeftChildRightSiblingTrees v0.2.1 [6fdf6af0] + LogDensityProblems v2.2.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 ⌅ [c7f686f2] + MCMCChains v6.0.7 [be115224] + MCMCDiagnosticTools v0.3.15 [ce233488] + MCMCTempering v0.3.2 [e80e1ace] + MLJModelInterface v1.12.1 [1914dd2f] + MacroTools v0.5.16 ⌅ [128add7d] + MicroCollections v0.1.4 [e1d29d7a] + Missings v1.2.0 [46d2c3a1] + MuladdMacro v0.2.4 [c020b1a1] + NaturalSort v1.0.0 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 ⌅ [08abe8d2] + PrettyTables v2.4.0 [27ebfcd6] + Primes v0.5.7 [33c8b6b6] + ProgressLogging v0.1.6 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [b3c3ace0] + RangeArrays v0.3.2 [c84ed2f1] + Ratios v0.4.5 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [30f210dd] + ScientificTypesBase v3.0.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [171d559e] + SplittablesBase v0.1.15 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [64bff920] + StatisticalTraits v3.5.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [892a3eda] + StringManipulation v0.4.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [5d786b92] + TerminalLoggers v0.1.7 ⌃ [28d57a85] + Transducers v0.4.80 [efce3f68] + WoodburyMatrices v1.1.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 9.95s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 5227.0 ms ✓ TestEnv 1 dependency successfully precompiled in 6 seconds. 27 already precompiled. ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/h9a3r/src/julia-1.13/activate_set.jl:78 Precompiling package dependencies... Precompiling packages... 4374.7 ms ✓ MacroTools 1643.2 ms ✓ InlineStrings 755.6 ms ✓ Reexport 907.8 ms ✓ MappedArrays 1044.9 ms ✓ ConstructionBase 1972.0 ms ✓ IrrationalConstants 896.2 ms ✓ ChangesOfVariables 775.9 ms ✓ DataValueInterfaces 902.9 ms ✓ StatsAPI 1180.7 ms ✓ IterTools 1034.1 ms ✓ IntervalSets 933.1 ms ✓ Functors 1919.4 ms ✓ Combinatorics 830.7 ms ✓ ArgCheck 728.5 ms ✓ CommonSolve 791.8 ms ✓ LaTeXStrings 2022.9 ms ✓ Baselet 1080.7 ms ✓ Statistics 869.5 ms ✓ Tricks 1635.2 ms ✓ StaticArraysCore 1336.1 ms ✓ LRUCache 752.7 ms ✓ PtrArrays 884.4 ms ✓ NaturalSort 908.6 ms ✓ DataAPI 887.8 ms ✓ RealDot 3267.4 ms ✓ UnsafeAtomics 1042.8 ms ✓ InvertedIndices 1844.9 ms ✓ RandomNumbers 1192.2 ms ✓ InverseFunctions 751.4 ms ✓ CompositionsBase 1273.6 ms ✓ AbstractTrees 765.5 ms ✓ SimpleUnPack 1425.9 ms ✓ InitialValues 828.0 ms ✓ MuladdMacro 1028.6 ms ✓ AbstractFFTs 826.5 ms ✓ EnumX 1982.5 ms ✓ FillArrays 837.2 ms ✓ ExprTools 799.1 ms ✓ IntegerMathUtils 813.2 ms ✓ ScientificTypesBase 803.8 ms ✓ ConcreteStructs 813.9 ms ✓ RangeArrays 1236.7 ms ✓ OrderedCollections 1720.6 ms ✓ FunctionWrappers 1034.2 ms ✓ HashArrayMappedTries 1404.7 ms ✓ ProgressLogging 1190.3 ms ✓ DocStringExtensions 897.9 ms ✓ DefineSingletons 1570.6 ms ✓ OffsetArrays 730.9 ms ✓ IteratorInterfaceExtensions 1784.8 ms ✓ Crayons 1007.5 ms ✓ DelimitedFiles 1019.3 ms ✓ NaNMath 1123.3 ms ✓ Requires 1840.4 ms ✓ PDMats 1311.9 ms ✓ SparseInverseSubset 1397.0 ms ✓ WoodburyMatrices 1953.9 ms ✓ SentinelArrays 1088.0 ms ✓ LoggingExtras 1722.9 ms ✓ ProgressMeter 1147.8 ms ✓ Compat 1101.6 ms ✓ Preferences 744.6 ms ✓ InplaceOps 5473.4 ms ✓ Lazy 1622.7 ms ✓ CommonSubexpressions 795.8 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 3955.6 ms ✓ ChangesOfVariables → ChangesOfVariablesTestExt 728.3 ms ✓ IntervalSets → IntervalSetsRandomExt 756.0 ms ✓ ConstructionBase → ConstructionBaseIntervalSetsExt 1242.3 ms ✓ Statistics → SparseArraysExt 765.5 ms ✓ IntervalSets → IntervalSetsStatisticsExt 870.5 ms ✓ DiffResults 783.4 ms ✓ LRUCache → SerializationExt 967.9 ms ✓ AliasTables 980.9 ms ✓ Missings 1073.1 ms ✓ PooledArrays 1034.8 ms ✓ Atomix 1853.8 ms ✓ Random123 854.4 ms ✓ InverseFunctions → InverseFunctionsDatesExt 1554.6 ms ✓ InverseFunctions → InverseFunctionsTestExt 776.9 ms ✓ ChangesOfVariables → ChangesOfVariablesInverseFunctionsExt 704.3 ms ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 665.2 ms ✓ LeftChildRightSiblingTrees 3258.9 ms ✓ AbstractFFTs → AbstractFFTsTestExt 1932.5 ms ✓ FillArrays → FillArraysSparseArraysExt 1386.0 ms ✓ FillArrays → FillArraysStatisticsExt 1034.3 ms ✓ RuntimeGeneratedFunctions 1366.3 ms ✓ Primes 944.9 ms ✓ StatisticalTraits 795.1 ms ✓ FunctionWrappersWrappers 1474.4 ms ✓ Libtask 1056.9 ms ✓ ScopedValues 1288.8 ms ✓ LogExpFunctions 1160.9 ms ✓ SymbolicIndexingInterface 1995.2 ms ✓ LogDensityProblems 770.4 ms ✓ TableTraits 870.2 ms ✓ Ratios 941.4 ms ✓ Adapt 1471.4 ms ✓ FillArrays → FillArraysPDMatsExt 1283.9 ms ✓ AxisAlgorithms 901.6 ms ✓ ConsoleProgressMonitor 825.6 ms ✓ Compat → CompatLinearAlgebraExt 870.3 ms ✓ PrecompileTools 1167.7 ms ✓ JLLWrappers 1487.6 ms ✓ TruncatedStacktraces 2762.9 ms ✓ Setfield 1501.1 ms ✓ AxisArrays 1668.0 ms ✓ DensityInterface 5140.0 ms ✓ Accessors 1729.2 ms ✓ TerminalLoggers 2364.4 ms ✓ FFTA 3074.8 ms ✓ MLJModelInterface 905.8 ms ✓ LogExpFunctions → LogExpFunctionsChangesOfVariablesExt 912.5 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 1289.4 ms ✓ LogDensityProblemsAD 1753.1 ms ✓ Tables 1431.3 ms ✓ ArrayInterface 1251.9 ms ✓ GPUArraysCore 792.6 ms ✓ OffsetArrays → OffsetArraysAdaptExt 2585.3 ms ✓ ChainRulesCore 3571.6 ms ✓ DataStructures 3018.2 ms ✓ StringManipulation 12058.2 ms ✓ StaticArrays 2754.5 ms ✓ RecipesBase 1305.9 ms ✓ Rmath_jll 1356.2 ms ✓ OpenSpecFun_jll 3314.2 ms ✓ SplittablesBase 1663.1 ms ✓ Accessors → TestExt 2318.7 ms ✓ Accessors → IntervalSetsExt 2138.6 ms ✓ Accessors → LinearAlgebraExt 1556.7 ms ✓ StructArrays 1529.6 ms ✓ BangBang 1224.4 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 1214.2 ms ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt 1382.0 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 2084.6 ms ✓ Optimisers 2397.7 ms ✓ ZygoteRules 934.6 ms ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 3335.1 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 1417.8 ms ✓ SortingAlgorithms 2584.4 ms ✓ QuadGK WARNING: Imported binding Base._sortslices was undeclared at import time during import to NamedArrays. WARNING: Imported binding Base._negdims was undeclared at import time during import to NamedArrays. WARNING: Imported binding Base.DimSelector was undeclared at import time during import to NamedArrays. ERROR: LoadError: invalid method definition in NamedArrays: exported function Base._sortslices does not exist Stacktrace:  [1] top-level scope  @ ~/.julia/packages/NamedArrays/spYk1/src/rearrange.jl:106  [2] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:310  [3] top-level scope  @ ~/.julia/packages/NamedArrays/spYk1/src/NamedArrays.jl:35  [4] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [5] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3308  [6] top-level scope  @ stdin:5  [7] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3150  [9] include_string  @ ./loading.jl:3160 [inlined]  [10] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [11] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/NamedArrays/spYk1/src/rearrange.jl:106 in expression starting at /home/pkgeval/.julia/packages/NamedArrays/spYk1/src/NamedArrays.jl:9 in expression starting at stdin:5 ✗ NamedArrays 26349.2 ms ✓ PrettyTables 1075.9 ms ✓ StaticArrays → StaticArraysStatisticsExt 1132.5 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1051.2 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1169.9 ms ✓ FillArrays → FillArraysStaticArraysExt 1028.7 ms ✓ Adapt → AdaptStaticArraysExt 1176.5 ms ✓ Accessors → StaticArraysExt 1099.5 ms ✓ IntervalSets → IntervalSetsRecipesBaseExt 1143.7 ms ✓ Rmath 3746.3 ms ✓ SpecialFunctions 5626.9 ms ✓ Roots 1271.7 ms ✓ StructArrays → StructArraysSparseArraysExt 926.2 ms ✓ StructArrays → StructArraysGPUArraysCoreExt 880.2 ms ✓ StructArrays → StructArraysAdaptExt 1515.3 ms ✓ StructArrays → StructArraysStaticArraysExt 1453.8 ms ✓ Accessors → StructArraysExt 2583.0 ms ✓ MicroCollections 1376.8 ms ✓ BangBang → BangBangChainRulesCoreExt 1276.5 ms ✓ BangBang → BangBangStructArraysExt 1630.4 ms ✓ BangBang → BangBangStaticArraysExt 4293.8 ms ✓ SciMLOperators 3298.0 ms ✓ RecursiveArrayTools 3895.8 ms ✓ StatsBase 68363.6 ms ✓ DataFrames 8087.2 ms ✓ KernelAbstractions 4477.4 ms ✓ Interpolations 4273.9 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 2233.2 ms ✓ HypergeometricFunctions 1277.6 ms ✓ DiffRules 1150.2 ms ✓ Roots → RootsChainRulesCoreExt 12399.6 ms ✓ ChainRules 6874.9 ms ✓ Transducers 10932.3 ms ✓ SciMLBase 5476.8 ms ✓ BangBang → BangBangDataFramesExt 2847.8 ms ✓ KernelAbstractions → SparseArraysExt 1979.7 ms ✓ KernelAbstractions → LinearAlgebraExt 3151.6 ms ✓ StatsFuns 6571.8 ms ✓ ForwardDiff 5638.5 ms ✓ Transducers → TransducersDataFramesExt 4326.1 ms ✓ AbstractMCMC 13424.1 ms ✓ NNlib 3824.7 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 1243.0 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 9515.4 ms ✓ Distributions 1981.4 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 1915.7 ms ✓ LogDensityProblemsAD → LogDensityProblemsADForwardDiffExt 2385.1 ms ✓ Roots → RootsForwardDiffExt 3247.1 ms ✓ Interpolations → InterpolationsForwardDiffExt 6671.8 ms ✓ AdvancedHMC 4052.9 ms ✓ AbstractPPL 2509.2 ms ✓ NNlib → NNlibSpecialFunctionsExt 2648.0 ms ✓ NNlib → NNlibForwardDiffExt 3493.7 ms ✓ Distributions → DistributionsTestExt 3179.6 ms ✓ Distributions → DistributionsDensityInterfaceExt 3913.9 ms ✓ Distributions → DistributionsChainRulesCoreExt 4646.4 ms ✓ MCMCDiagnosticTools 11772.9 ms ✓ Tracker 4436.2 ms ✓ AdvancedPS 3924.6 ms ✓ AdvancedMH 3758.5 ms ✓ EllipticalSliceSampling 4497.2 ms ✓ KernelDensity 6172.5 ms ✓ Bijectors 7040.3 ms ✓ DistributionsAD 2574.1 ms ✓ Tracker → TrackerPDMatsExt 2278.3 ms ✓ LogDensityProblemsAD → LogDensityProblemsADTrackerExt 2588.6 ms ✓ ArrayInterface → ArrayInterfaceTrackerExt 2677.2 ms ✓ RecursiveArrayTools → RecursiveArrayToolsTrackerExt 3432.7 ms ✓ AdvancedMH → AdvancedMHStructArraysExt 3681.1 ms ✓ AdvancedMH → AdvancedMHForwardDiffExt 8993.1 ms ✓ MCMCChains 21204.8 ms ✓ DynamicPPL 3333.0 ms ✓ DistributionsAD → DistributionsADForwardDiffExt 7160.9 ms ✓ DistributionsAD → DistributionsADTrackerExt 12335.5 ms ✓ MCMCTempering 6448.1 ms ✓ AdvancedHMC → AdvancedHMCMCMCChainsExt 6589.7 ms ✓ AdvancedMH → AdvancedMHMCMCChainsExt 5284.3 ms ✓ AdvancedVI 12946.5 ms ✓ Turing 219 dependencies successfully precompiled in 652 seconds. 22 already precompiled. Precompilation completed after 665.73s ################################################################################ # Testing # Testing MCMCTempering Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_Komk50/Project.toml` ⌅ [0bf59076] + AdvancedHMC v0.4.6 ⌅ [5b7e9947] + AdvancedMH v0.7.5 ⌅ [76274a88] + Bijectors v0.10.8 [a93c6f00] + DataFrames v1.8.1 ⌅ [f6369f11] + ForwardDiff v0.10.39 [996a588d] + LogDensityProblemsAD v1.13.1 [ce233488] + MCMCTempering v0.3.2 ⌅ [fce5fe82] + Turing v0.24.4 Updating `/tmp/jl_Komk50/Manifest.toml` ⌅ [7a57a42e] + AbstractPPL v0.5.4 [7d9f7c33] + Accessors v0.1.43 ⌅ [79e6a3ab] ↓ Adapt v4.4.0 ⇒ v3.7.2 ⌅ [0bf59076] + AdvancedHMC v0.4.6 ⌅ [5b7e9947] + AdvancedMH v0.7.5 ⌅ [576499cb] + AdvancedPS v0.4.3 ⌅ [b5ca4192] + AdvancedVI v0.1.6 ⌃ [4fba245c] + ArrayInterface v7.7.1 [a9b6321e] + Atomix v1.1.2 ⌅ [76274a88] + Bijectors v0.10.8 [082447d4] + ChainRules v1.72.6 [9e997f8a] + ChangesOfVariables v0.1.10 [861a8166] + Combinatorics v1.1.0 [38540f10] + CommonSolve v0.2.6 [bbf7d656] + CommonSubexpressions v0.3.1 [2569d6c7] + ConcreteStructs v0.2.3 [a93c6f00] + DataFrames v1.8.1 ⌅ [864edb3b] ↓ DataStructures v0.19.3 ⇒ v0.18.22 [8bb1440f] + DelimitedFiles v1.9.1 [b429d917] + DensityInterface v0.4.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [ced4e74d] + DistributionsAD v0.6.58 ⌅ [366bfd00] + DynamicPPL v0.21.6 ⌅ [cad2338a] + EllipticalSliceSampling v1.1.0 [4e289a0a] + EnumX v1.0.5 [e2ba6199] + ExprTools v0.1.10 ⌅ [f6369f11] + ForwardDiff v0.10.39 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 ⌅ [d9f16b24] + Functors v0.3.0 ⌅ [46192b85] + GPUArraysCore v0.1.5 [076d061b] + HashArrayMappedTries v0.2.0 [842dd82b] + InlineStrings v1.4.5 [505f98c9] + InplaceOps v0.3.0 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [63c18a36] + KernelAbstractions v0.9.39 [8ac3fa9e] + LRUCache v1.6.2 [50d2b5c4] + Lazy v0.15.1 ⌅ [6f1fad26] + Libtask v0.8.8 [996a588d] + LogDensityProblemsAD v1.13.1 [ce233488] + MCMCTempering v0.3.2 [dbb5928d] + MappedArrays v0.4.3 ⌃ [872c559c] + NNlib v0.9.31 [77ba4419] + NaNMath v1.1.3 ⌅ [86f7a689] + NamedArrays v0.9.8 ⌃ [3bd65402] + Optimisers v0.2.15 ⌃ [90014a1f] ↓ PDMats v0.11.37 ⇒ v0.11.35 [2dfb63ee] + PooledArrays v1.4.3 [74087812] + Random123 v1.7.1 [e6cf234a] + RandomNumbers v1.6.0 [c1ae055f] + RealDot v0.1.0 ⌅ [731186ca] + RecursiveArrayTools v2.38.10 [f2b01f46] + Roots v2.2.10 [7e49a35a] + RuntimeGeneratedFunctions v0.5.16 ⌅ [0bca4576] + SciMLBase v1.92.0 ⌅ [c0aeaf25] + SciMLOperators v0.2.12 [7e506255] + ScopedValues v1.5.0 [91c51154] + SentinelArrays v1.4.9 [ce78b400] + SimpleUnPack v1.1.0 [dc90abb0] + SparseInverseSubset v0.1.2 ⌅ [2913bbd2] ↓ StatsBase v0.34.10 ⇒ v0.33.21 ⌃ [09ab397b] + StructArrays v0.6.18 ⌅ [2efcf032] + SymbolicIndexingInterface v0.2.2 [9f7883ad] + Tracker v0.2.38 [410a4b4d] + Tricks v0.1.13 [781d530d] + TruncatedStacktraces v1.4.0 ⌅ [fce5fe82] + Turing v0.24.4 [013be700] + UnsafeAtomics v0.3.0 [700de1a5] + ZygoteRules v0.2.7 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_Komk50/Project.toml` ⌅ [80f14c24] AbstractMCMC v4.4.2 ⌅ [0bf59076] AdvancedHMC v0.4.6 ⌅ [5b7e9947] AdvancedMH v0.7.5 ⌅ [76274a88] Bijectors v0.10.8 [a93c6f00] DataFrames v1.8.1 [31c24e10] Distributions v0.25.123 [1a297f60] FillArrays v1.16.0 ⌅ [f6369f11] ForwardDiff v0.10.39 [6fdf6af0] LogDensityProblems v2.2.0 [996a588d] LogDensityProblemsAD v1.13.1 ⌅ [c7f686f2] MCMCChains v6.0.7 [be115224] MCMCDiagnosticTools v0.3.15 [ce233488] MCMCTempering v0.3.2 [efcf1570] Setfield v1.1.2 [10745b16] Statistics v1.11.1 ⌅ [fce5fe82] Turing v0.24.4 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_Komk50/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 ⌅ [80f14c24] AbstractMCMC v4.4.2 ⌅ [7a57a42e] AbstractPPL v0.5.4 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.43 ⌅ [79e6a3ab] Adapt v3.7.2 ⌅ [0bf59076] AdvancedHMC v0.4.6 ⌅ [5b7e9947] AdvancedMH v0.7.5 ⌅ [576499cb] AdvancedPS v0.4.3 ⌅ [b5ca4192] AdvancedVI v0.1.6 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 ⌃ [4fba245c] ArrayInterface v7.7.1 [a9b6321e] Atomix v1.1.2 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.8 ⌅ [198e06fe] BangBang v0.3.40 [9718e550] Baselet v0.1.1 ⌅ [76274a88] Bijectors v0.10.8 [082447d4] ChainRules v1.72.6 [d360d2e6] ChainRulesCore v1.26.0 [9e997f8a] ChangesOfVariables v0.1.10 [861a8166] Combinatorics v1.1.0 [38540f10] CommonSolve v0.2.6 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [88cd18e8] ConsoleProgressMonitor v0.1.2 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [244e2a9f] DefineSingletons v0.1.2 [8bb1440f] DelimitedFiles v1.9.1 [b429d917] DensityInterface v0.4.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [31c24e10] Distributions v0.25.123 [ced4e74d] DistributionsAD v0.6.58 [ffbed154] DocStringExtensions v0.9.5 ⌅ [366bfd00] DynamicPPL v0.21.6 ⌅ [cad2338a] EllipticalSliceSampling v1.1.0 [4e289a0a] EnumX v1.0.5 [e2ba6199] ExprTools v0.1.10 [b86e33f2] FFTA v0.3.1 [1a297f60] FillArrays v1.16.0 ⌅ [f6369f11] ForwardDiff v0.10.39 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 ⌅ [d9f16b24] Functors v0.3.0 ⌅ [46192b85] GPUArraysCore v0.1.5 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [22cec73e] InitialValues v0.3.1 [842dd82b] InlineStrings v1.4.5 [505f98c9] InplaceOps v0.3.0 [18e54dd8] IntegerMathUtils v0.1.3 [a98d9a8b] Interpolations v0.16.2 [8197267c] IntervalSets v0.7.13 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [63c18a36] KernelAbstractions v0.9.39 [5ab0869b] KernelDensity v0.6.11 [8ac3fa9e] LRUCache v1.6.2 [b964fa9f] LaTeXStrings v1.4.0 [50d2b5c4] Lazy v0.15.1 [1d6d02ad] LeftChildRightSiblingTrees v0.2.1 ⌅ [6f1fad26] Libtask v0.8.8 [6fdf6af0] LogDensityProblems v2.2.0 [996a588d] LogDensityProblemsAD v1.13.1 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 ⌅ [c7f686f2] MCMCChains v6.0.7 [be115224] MCMCDiagnosticTools v0.3.15 [ce233488] MCMCTempering v0.3.2 [e80e1ace] MLJModelInterface v1.12.1 [1914dd2f] MacroTools v0.5.16 [dbb5928d] MappedArrays v0.4.3 ⌅ [128add7d] MicroCollections v0.1.4 [e1d29d7a] Missings v1.2.0 [46d2c3a1] MuladdMacro v0.2.4 ⌃ [872c559c] NNlib v0.9.31 [77ba4419] NaNMath v1.1.3 ⌅ [86f7a689] NamedArrays v0.9.8 [c020b1a1] NaturalSort v1.0.0 [6fe1bfb0] OffsetArrays v1.17.0 ⌃ [3bd65402] Optimisers v0.2.15 [bac558e1] OrderedCollections v1.8.1 ⌃ [90014a1f] PDMats v0.11.35 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.1 ⌅ [08abe8d2] PrettyTables v2.4.0 [27ebfcd6] Primes v0.5.7 [33c8b6b6] ProgressLogging v0.1.6 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [74087812] Random123 v1.7.1 [e6cf234a] RandomNumbers v1.6.0 [b3c3ace0] RangeArrays v0.3.2 [c84ed2f1] Ratios v0.4.5 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 ⌅ [731186ca] RecursiveArrayTools v2.38.10 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [f2b01f46] Roots v2.2.10 [7e49a35a] RuntimeGeneratedFunctions v0.5.16 ⌅ [0bca4576] SciMLBase v1.92.0 ⌅ [c0aeaf25] SciMLOperators v0.2.12 [30f210dd] ScientificTypesBase v3.0.0 [7e506255] ScopedValues v1.5.0 [91c51154] SentinelArrays v1.4.9 [efcf1570] Setfield v1.1.2 [ce78b400] SimpleUnPack v1.1.0 [a2af1166] SortingAlgorithms v1.2.2 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.6.1 [171d559e] SplittablesBase v0.1.15 [90137ffa] StaticArrays v1.9.16 [1e83bf80] StaticArraysCore v1.4.4 [64bff920] StatisticalTraits v3.5.0 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 ⌅ [2913bbd2] StatsBase v0.33.21 [4c63d2b9] StatsFuns v1.5.2 [892a3eda] StringManipulation v0.4.2 ⌃ [09ab397b] StructArrays v0.6.18 ⌅ [2efcf032] SymbolicIndexingInterface v0.2.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [5d786b92] TerminalLoggers v0.1.7 [9f7883ad] Tracker v0.2.38 ⌃ [28d57a85] Transducers v0.4.80 [410a4b4d] Tricks v0.1.13 [781d530d] TruncatedStacktraces v1.4.0 ⌅ [fce5fe82] Turing v0.24.4 [013be700] UnsafeAtomics v0.3.0 [efce3f68] WoodburyMatrices v1.1.0 [700de1a5] ZygoteRules v0.2.7 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [8e850b90] libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... WARNING: Method definition (::Type{Main.StateHistoryCallback{A, F} where F where A})(Any, Any) in module Main at /home/pkgeval/.julia/packages/MCMCTempering/movdr/test/utils.jl:17 overwritten at /home/pkgeval/.julia/packages/MCMCTempering/movdr/test/utils.jl:21. The temperature was sorted to ensure decreasing order. ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 344.555 │ :param_1 => 521.201 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 408.937 └ :param_1 => 534.146 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 344.555 │ :param_1 => 521.201 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 664.297 └ :param_1 => 605.989 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 344.555 │ :param_1 => 521.201 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 397.332 └ :param_1 => 354.744 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 344.555 │ :param_1 => 521.201 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 433.234 └ :param_1 => 386.515 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 344.555 │ :param_1 => 521.201 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :param_2 => 405.75 └ :param_1 => 488.754 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :m => 1508.81 │ :s => 1593.32 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :m => 1433.17 └ :s => 1718.4 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :m => 1508.81 │ :s => 1593.32 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :m => 2684.18 └ :s => 2799.33 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :m => 246.355 │ :s => 308.798 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :m => 214.987 └ :s => 307.551 ┌ Info: │ ess = │ Dict{Symbol, Float64} with 2 entries: │ :m => 246.355 │ :s => 308.798 │ ess_tempered = │ Dict{Symbol, Float64} with 2 entries: │ :m => 1009.3 └ :s => 1057.39 ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.0332489073873252, 1.0, 0.16348909559128477) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.101940191630983, 1.118033988749895, 0.09136968133215262) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.278360720484444, 1.25, 0.1287413040472236) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.4744175175000749, 1.3975424859373684, 0.12028401677531513) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.5810419240348625, 1.5624999999999998, 0.12002679709639821) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.753808712395724, 1.7469281074217102, 0.1547932853987471) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.0146326203869633, 1.9531249999999996, 0.16416404993293765) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.2413674783077684, 2.1836601342771376, 0.18796311591160667) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.4542447863448866, 2.4414062499999996, 0.18547844524987028) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.764578237101615, 2.729575167846422, 0.3276401613313646) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (3.366527990359358, 3.051757812499999, 0.3742003210935471) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (0.9828660015933562, 1.0, 0.0759505720859621) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.134821020488935, 1.118033988749895, 0.08574670490196513) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.2060618095412587, 1.25, 0.09368954524105409) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.4782462460483567, 1.3975424859373684, 0.1390984621703396) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.5689041753149828, 1.5624999999999998, 0.13082863042970846) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.8030092685092929, 1.7469281074217102, 0.16487731867596384) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.848606057045951, 1.9531249999999996, 0.173822769298571) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.2857139256392704, 2.1836601342771376, 0.21854989050943588) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.465304449952267, 2.4414062499999996, 0.25041104908304623) chain 10: Test Failed at /home/pkgeval/.julia/packages/MCMCTempering/movdr/test/test_utils.jl:51 Expression: all((isapprox(mean(chain[sym]), 0, atol = atol[sym]) for sym = names(chain, :parameters))) Evaluated: all(Base.Generator{Vector{Symbol}, var"#13#14"{Chains{Float64, AxisArrays.AxisArray{Float64, 3, Array{Float64, 3}, Tuple{AxisArrays.Axis{:iter, StepRange{Int64, Int64}}, AxisArrays.Axis{:var, Vector{Symbol}}, AxisArrays.Axis{:chain, UnitRange{Int64}}}}, Missing, @NamedTuple{parameters::Vector{Symbol}, internals::Vector{Symbol}}, @NamedTuple{}}, Dict{Symbol, Float64}}}(var"#13#14"{Chains{Float64, AxisArrays.AxisArray{Float64, 3, Array{Float64, 3}, Tuple{AxisArrays.Axis{:iter, StepRange{Int64, Int64}}, AxisArrays.Axis{:var, Vector{Symbol}}, AxisArrays.Axis{:chain, UnitRange{Int64}}}}, Missing, @NamedTuple{parameters::Vector{Symbol}, internals::Vector{Symbol}}, @NamedTuple{}}, Dict{Symbol, Float64}}(MCMC chain (1000×2×1 Array{Float64, 3}), Dict(:param_1 => 0.5463920023447821)), [:param_1])) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] [2] test_means(chain::Chains{Float64, AxisArrays.AxisArray{Float64, 3, Array{Float64, 3}, Tuple{AxisArrays.Axis{:iter, StepRange{Int64, Int64}}, AxisArrays.Axis{:var, Vector{Symbol}}, AxisArrays.Axis{:chain, UnitRange{Int64}}}}, Missing, @NamedTuple{parameters::Vector{Symbol}, internals::Vector{Symbol}}, @NamedTuple{}}, mean_true::Dict{Symbol, Float64}; n::Int64, kwargs::@Kwargs{}) @ Main ~/.julia/packages/MCMCTempering/movdr/test/test_utils.jl:51 [3] test_means @ ~/.julia/packages/MCMCTempering/movdr/test/test_utils.jl:48 [inlined] [4] #test_means#7 @ ~/.julia/packages/MCMCTempering/movdr/test/test_utils.jl:46 [inlined] [5] test_means @ ~/.julia/packages/MCMCTempering/movdr/test/test_utils.jl:45 [inlined] [6] macro expansion @ ~/.julia/packages/MCMCTempering/movdr/test/test_utils.jl:122 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2324 [inlined] [8] test_chains_with_monotonic_variance(chains::Vector{Chains{Float64, AxisArrays.AxisArray{Float64, 3, Array{Float64, 3}, Tuple{AxisArrays.Axis{:iter, StepRange{Int64, Int64}}, AxisArrays.Axis{:var, Vector{Symbol}}, AxisArrays.Axis{:chain, UnitRange{Int64}}}}, Missing, @NamedTuple{parameters::Vector{Symbol}, internals::Vector{Symbol}}, @NamedTuple{}}}, mean_true::Zeros{Float64, 1, Tuple{Base.OneTo{Int64}}}, std_true::Vector{Dict{Symbol, Float64}}; significance::Float64, kwargs::@Kwargs{}) @ Main ~/.julia/packages/MCMCTempering/movdr/test/test_utils.jl:121 ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.762345531103008, 2.729575167846422, 0.2828797078217396) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (3.0669651524079016, 3.051757812499999, 0.3781926606164944) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (0.972140907199215, 1.0, 0.06553180289112692) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.1040352295696831, 1.118033988749895, 0.08531034423306336) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.2430372749620835, 1.25, 0.08952322104071453) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.4392451786399916, 1.3975424859373684, 0.106871415410448) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.5514357695830143, 1.5624999999999998, 0.11707089521663515) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.7312295707378187, 1.7469281074217102, 0.15013909410903692) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.8735212330993192, 1.9531249999999996, 0.13873525828925432) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.0680739982415965, 2.1836601342771376, 0.1581031685750705) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.378655125422212, 2.4414062499999996, 0.1798122573765133) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.718688661853663, 2.729575167846422, 0.23220636783648488) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (3.1665584434150014, 3.051757812499999, 0.4070605233091922) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (0.972140907199215, 1.0, 0.06553180289112692) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.1040352295696831, 1.118033988749895, 0.08531034423306336) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.2430372749620835, 1.25, 0.08952322104071453) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.4392451786399916, 1.3975424859373684, 0.106871415410448) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.5514357695830143, 1.5624999999999998, 0.11707089521663515) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.7312295707378187, 1.7469281074217102, 0.15013909410903692) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (1.8735212330993192, 1.9531249999999996, 0.13873525828925432) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.0680739982415965, 2.1836601342771376, 0.1581031685750705) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.378655125422212, 2.4414062499999996, 0.1798122573765133) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (2.718688661853663, 2.729575167846422, 0.23220636783648488) ┌ Info: std │ [(std(chain[sym]), std_true[sym], atol[sym]) for sym = names(chain, :parameters)] = │ 1-element Vector{Tuple{Float64, Float64, Float64}}: └ (3.1665584434150014, 3.051757812499999, 0.4070605233091922) Test Summary: | Pass Fail Total Time MCMCTempering.jl | 1520 1 1521 4m53.5s Swapping | 34 34 1.3s Simple MvNormal with no expected swaps | 9 9 26.5s GMM 1D | 9 9 8.2s MvNormal 2D with different swap strategies | 53 53 50.6s Turing.jl | 26 26 2m06.0s AbstractMCMC | 1262 1262 34.7s Simple tempered Gaussian (closed form) | 127 1 128 45.9s TemperedSampler | 32 32 24.9s MultiSampler without swapping | 31 1 32 11.7s chain 1 | 2 2 0.0s chain 2 | 2 2 0.0s chain 3 | 2 2 0.0s chain 4 | 2 2 0.0s chain 5 | 2 2 0.0s chain 6 | 2 2 0.0s chain 7 | 2 2 0.0s chain 8 | 2 2 0.0s chain 9 | 2 2 0.0s chain 10 | 1 1 2 6.0s chain 11 | 2 2 0.0s MultiSampler with swapping (saveall=true) | 32 32 5.1s MultiSampler with swapping (saveall=true) | 32 32 3.6s RNG of the outermost testset: Random.Xoshiro(0xef24e6012b8c6293, 0xed289b6dedd589cc, 0x44cf7067b35351bb, 0x319e89bfa26438ff, 0x6a01ae8ee66b2797) ERROR: LoadError: Some tests did not pass: 1520 passed, 1 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/MCMCTempering/movdr/test/runtests.jl:186 Testing failed after 335.14s ERROR: LoadError: Package MCMCTempering errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3122 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2987 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:585 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 1067.03s: package has test failures