Package evaluation to test PlantSimEngine on Julia 1.14.0-DEV.1584 (ac5fadde9b*) started at 2026-01-18T23:44:28.777 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 7.37s ################################################################################ # Installation # Installing PlantSimEngine... Resolving package versions... Installed ChunkCodecLibZstd ─────────── v1.0.0 Installed CompositionsBase ──────────── v0.1.2 Installed MicroCollections ──────────── v0.2.0 Installed MacroTools ────────────────── v0.5.16 Installed FilePathsBase ─────────────── v0.9.24 Installed NameResolution ────────────── v0.1.5 Installed URIs ──────────────────────── v1.6.1 Installed DataStructures ────────────── v0.19.3 Installed DefineSingletons ──────────── v0.1.2 Installed MutableNamedTuples ────────── v0.1.3 Installed AbstractTrees ─────────────── v0.4.5 Installed DelimitedFiles ────────────── v1.9.1 Installed InlineStrings ─────────────── v1.4.5 Installed MetaGraphsNext ────────────── v0.7.5 Installed JLD2 ──────────────────────── v0.6.3 Installed FLoops ────────────────────── v0.2.2 Installed ConstructionBase ──────────── v1.6.0 Installed ContextVariablesX ─────────── v0.1.3 Installed UnicodeFun ────────────────── v0.4.1 Installed ZipFile ───────────────────── v0.10.1 Installed ArnoldiMethod ─────────────── v0.4.0 Installed CodecZlib ─────────────────── v0.7.8 Installed JuliaVariables ────────────── v0.2.4 Installed ConcurrentUtilities ───────── v2.5.0 Installed ExceptionUnwrapping ───────── v0.1.11 Installed OrderedCollections ────────── v1.8.1 Installed HashArrayMappedTries ──────── v0.2.0 Installed TranscodingStreams ────────── v0.11.3 Installed Compat ────────────────────── v4.18.1 Installed ZipArchives ───────────────── v2.6.0 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed DataAPI ───────────────────── v1.16.0 Installed InvertedIndices ───────────── v1.3.1 Installed ProgressLogging ───────────── v0.1.6 Installed Statistics ────────────────── v1.11.1 Installed PrecompileTools ───────────── v1.3.3 Installed DataValueInterfaces ───────── v1.0.0 Installed StringEncodings ───────────── v0.3.7 Installed InitialValues ─────────────── v0.3.1 Installed CodecInflate64 ────────────── v0.1.3 Installed PlantSimEngine ────────────── v0.13.2 Installed ArgCheck ──────────────────── v2.5.0 Installed MbedTLS ───────────────────── v1.1.9 Installed SentinelArrays ────────────── v1.4.9 Installed FileIO ────────────────────── v1.17.1 Installed OpenSSL ───────────────────── v1.6.1 Installed StaticArrays ──────────────── v1.9.16 Installed LoggingExtras ─────────────── v1.2.0 Installed StaticArraysCore ──────────── v1.4.4 Installed PrettyPrint ───────────────── v0.2.0 Installed CodeTracking ──────────────── v3.0.0 Installed BangBang ──────────────────── v0.4.6 Installed SimpleTraits ──────────────── v0.9.5 Installed StringManipulation ────────── v0.4.2 Installed Requires ──────────────────── v1.3.1 Installed Term ──────────────────────── v2.0.8 Installed HTTP ──────────────────────── v1.10.19 Installed ChunkCodecLibZlib ─────────── v1.0.0 Installed Highlights ────────────────── v0.5.3 Installed YAML ──────────────────────── v0.4.16 Installed BitFlags ──────────────────── v0.1.9 Installed FLoopsBase ────────────────── v0.1.1 Installed JSON ──────────────────────── v0.21.4 Installed CSV ───────────────────────── v0.10.15 Installed ScopedValues ──────────────── v1.5.0 Installed PrettyTables ──────────────── v2.4.0 Installed Parsers ───────────────────── v2.8.3 Installed Parameters ────────────────── v0.12.3 Installed SplittablesBase ───────────── v0.1.15 Installed MultiScaleTreeGraph ───────── v0.14.4 Installed XML2_jll ──────────────────── v2.15.1+0 Installed Tables ────────────────────── v1.12.1 Installed Transducers ───────────────── v0.4.85 Installed MyterialColors ────────────── v0.3.0 Installed Setfield ──────────────────── v1.1.2 Installed Reexport ──────────────────── v1.2.2 Installed InverseFunctions ──────────── v0.1.17 Installed SimpleBufferStream ────────── v1.2.0 Installed Missings ──────────────────── v1.2.0 Installed Preferences ───────────────── v1.5.1 Installed DataFrames ────────────────── v1.8.1 Installed Baselet ───────────────────── v0.1.1 Installed WeakRefStrings ────────────── v1.4.2 Installed EzXML ─────────────────────── v1.2.3 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed PooledArrays ──────────────── v1.4.3 Installed JLLWrappers ───────────────── v1.7.1 Installed TableTraits ───────────────── v1.0.1 Installed LaTeXStrings ──────────────── v1.4.0 Installed SortingAlgorithms ─────────── v1.2.2 Installed MbedTLS_jll ───────────────── v2.28.1010+0 Installed ChunkCodecCore ────────────── v1.0.1 Installed Crayons ───────────────────── v4.1.1 Installed MLStyle ───────────────────── v0.4.17 Installed UnPack ────────────────────── v1.0.2 Installed WorkerUtilities ───────────── v1.6.1 Installed XLSX ──────────────────────── v0.10.4 Installed Inflate ───────────────────── v0.1.5 Installed DocStringExtensions ───────── v0.9.5 Installed PlantMeteo ────────────────── v0.6.1 Installed InputBuffers ──────────────── v1.1.1 Installed Graphs ────────────────────── v1.13.3 Installed Accessors ─────────────────── v0.1.43 Installing 4 artifacts Installed artifact XLSX_relocatable_data 6.0 KiB Installed artifact Libiconv 1.9 MiB Installed artifact XML2 2.2 MiB Installed artifact MbedTLS 2.2 MiB Updating `~/.julia/environments/v1.14/Project.toml` [9a576370] + PlantSimEngine v0.13.2 Updating `~/.julia/environments/v1.14/Manifest.toml` [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.43 [dce04be8] + ArgCheck v2.5.0 [ec485272] + ArnoldiMethod v0.4.0 [198e06fe] + BangBang v0.4.6 [9718e550] + Baselet v0.1.1 [d1d4a3ce] + BitFlags v0.1.9 [336ed68f] + CSV v0.10.15 [0b6fb165] + ChunkCodecCore v1.0.1 [4c0bbee4] + ChunkCodecLibZlib v1.0.0 [55437552] + ChunkCodecLibZstd v1.0.0 [da1fd8a2] + CodeTracking v3.0.0 [6309b1aa] + CodecInflate64 v0.1.3 [944b1d66] + CodecZlib v0.7.8 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [f0e56b4a] + ConcurrentUtilities v2.5.0 [187b0558] + ConstructionBase v1.6.0 [6add18c4] + ContextVariablesX v0.1.3 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [8bb1440f] + DelimitedFiles v1.9.1 [ffbed154] + DocStringExtensions v0.9.5 [460bff9d] + ExceptionUnwrapping v0.1.11 [8f5d6c58] + EzXML v1.2.3 [cc61a311] + FLoops v0.2.2 [b9860ae5] + FLoopsBase v0.1.1 [5789e2e9] + FileIO v1.17.1 [48062228] + FilePathsBase v0.9.24 [86223c79] + Graphs v1.13.3 [cd3eb016] + HTTP v1.10.19 [076d061b] + HashArrayMappedTries v0.2.0 [eafb193a] + Highlights v0.5.3 [d25df0c9] + Inflate v0.1.5 [22cec73e] + InitialValues v0.3.1 [842dd82b] + InlineStrings v1.4.5 [0c81fc1b] + InputBuffers v1.1.1 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [033835bb] + JLD2 v0.6.3 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [b14d175d] + JuliaVariables v0.2.4 [b964fa9f] + LaTeXStrings v1.4.0 [e6f89c97] + LoggingExtras v1.2.0 [d8e11817] + MLStyle v0.4.17 [1914dd2f] + MacroTools v0.5.16 [739be429] + MbedTLS v1.1.9 [fa8bd995] + MetaGraphsNext v0.7.5 [128add7d] + MicroCollections v0.2.0 [e1d29d7a] + Missings v1.2.0 [dd4a991b] + MultiScaleTreeGraph v0.14.4 [af6c499f] + MutableNamedTuples v0.1.3 [1c23619d] + MyterialColors v0.3.0 [71a1bf82] + NameResolution v0.1.5 [4d8831e6] + OpenSSL v1.6.1 [bac558e1] + OrderedCollections v1.8.1 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [4630fe09] + PlantMeteo v0.6.1 [9a576370] + PlantSimEngine v0.13.2 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [8162dcfd] + PrettyPrint v0.2.0 ⌅ [08abe8d2] + PrettyTables v2.4.0 [33c8b6b6] + ProgressLogging v0.1.6 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [7e506255] + ScopedValues v1.5.0 [91c51154] + SentinelArrays v1.4.9 [efcf1570] + Setfield v1.1.2 [777ac1f9] + SimpleBufferStream v1.2.0 [699a6c99] + SimpleTraits v0.9.5 [a2af1166] + SortingAlgorithms v1.2.2 [171d559e] + SplittablesBase v0.1.15 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [69024149] + StringEncodings v0.3.7 [892a3eda] + StringManipulation v0.4.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [22787eb5] + Term v2.0.8 [3bb67fe8] + TranscodingStreams v0.11.3 [28d57a85] + Transducers v0.4.85 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [1cfade01] + UnicodeFun v0.4.1 [ea10d353] + WeakRefStrings v1.4.2 [76eceee3] + WorkerUtilities v1.6.1 [fdbf4ff8] + XLSX v0.10.4 [ddb6d928] + YAML v0.4.16 [49080126] + ZipArchives v2.6.0 [a5390f91] + ZipFile v0.10.1 [94ce4f54] + Libiconv_jll v1.18.0+0 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [02c8fc9c] + XML2_jll v2.15.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.18.0+0 [e37daf67] + LibGit2_jll v1.9.2+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.12.2 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 9.85s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 3411.4 ms ✓ TestEnv 1 dependency successfully precompiled in 4 seconds. 27 already precompiled. Precompiling package dependencies... Precompiling packages... 4531.5 ms ✓ MacroTools 1630.5 ms ✓ InlineStrings 831.0 ms ✓ Reexport 1255.2 ms ✓ ConstructionBase 966.2 ms ✓ PrettyPrint 815.4 ms ✓ DataValueInterfaces 912.5 ms ✓ LazilyInitializedFields 1029.1 ms ✓ Inflate 977.4 ms ✓ ArgCheck 1344.9 ms ✓ TranscodingStreams 888.5 ms ✓ LaTeXStrings 1026.1 ms ✓ ChunkCodecCore 2422.9 ms ✓ Baselet 1076.5 ms ✓ Statistics 841.7 ms ✓ StaticArraysCore 686.1 ms ✓ SimpleBufferStream 828.6 ms ✓ ANSIColoredPrinters 703.9 ms ✓ DataAPI 979.4 ms ✓ URIs 718.1 ms ✓ InputBuffers 20863.4 ms ✓ MLStyle 1062.7 ms ✓ InvertedIndices 775.1 ms ✓ InverseFunctions 837.9 ms ✓ CompositionsBase 894.8 ms ✓ BitFlags 1119.0 ms ✓ AbstractTrees 1657.0 ms ✓ InitialValues 1073.9 ms ✓ WorkerUtilities 1025.0 ms ✓ MyterialColors 909.1 ms ✓ UnPack 1316.0 ms ✓ OrderedCollections 812.1 ms ✓ MutableNamedTuples 984.5 ms ✓ HashArrayMappedTries 1113.4 ms ✓ ProgressLogging 1140.4 ms ✓ DocStringExtensions 870.0 ms ✓ DefineSingletons 844.7 ms ✓ IteratorInterfaceExtensions 2129.0 ms ✓ Crayons 990.5 ms ✓ IOCapture 1157.6 ms ✓ DelimitedFiles 1372.6 ms ✓ ZipFile 1336.1 ms ✓ Requires 2077.4 ms ✓ ConcurrentUtilities 2199.0 ms ✓ SentinelArrays 1204.7 ms ✓ LoggingExtras 1503.3 ms ✓ CodeTracking 3412.9 ms ✓ UnicodeFun 1329.8 ms ✓ Compat 1291.9 ms ✓ Preferences 1712.3 ms ✓ ExceptionUnwrapping 3448.4 ms ✓ SimpleTraits 909.2 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 852.1 ms ✓ NameResolution 5500.9 ms ✓ RegistryInstances 1391.2 ms ✓ CodecInflate64 903.9 ms ✓ CodecZlib 845.9 ms ✓ ChunkCodecLibZlib 1147.8 ms ✓ ChunkCodecLibZstd 1381.3 ms ✓ Statistics → SparseArraysExt 1497.4 ms ✓ Missings 1253.9 ms ✓ PooledArrays 1003.1 ms ✓ InverseFunctions → InverseFunctionsDatesExt 1781.9 ms ✓ InverseFunctions → InverseFunctionsTestExt 928.5 ms ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 3931.0 ms ✓ OpenSSL 1729.6 ms ✓ MarkdownAST 983.0 ms ✓ Parameters 3972.3 ms ✓ DataStructures 1213.8 ms ✓ ScopedValues 11372.6 ms ✓ Highlights 841.7 ms ✓ TableTraits 8730.0 ms ✓ FileIO 937.7 ms ✓ Compat → CompatLinearAlgebraExt 998.9 ms ✓ PrecompileTools 1407.2 ms ✓ JLLWrappers 3164.1 ms ✓ Setfield 11707.1 ms ✓ JuliaVariables 5255.1 ms ✓ Accessors 1119.2 ms ✓ SortingAlgorithms 1873.5 ms ✓ Tables 2245.8 ms ✓ FilePathsBase 6127.5 ms ✓ Aqua 959.3 ms ✓ ContextVariablesX 3420.4 ms ✓ StringManipulation 14156.5 ms ✓ StaticArrays 16746.8 ms ✓ Parsers 9704.7 ms ✓ ZipArchives 48943.2 ms ✓ JLD2 1497.6 ms ✓ Git_LFS_jll 1586.2 ms ✓ OpenSSH_jll 1490.9 ms ✓ Libiconv_jll 1636.5 ms ✓ MbedTLS_jll 1715.4 ms ✓ Expat_jll 3739.6 ms ✓ SplittablesBase 2355.7 ms ✓ Accessors → TestExt 2628.8 ms ✓ Accessors → LinearAlgebraExt 67466.1 ms ✓ Term 2753.2 ms ✓ FilePathsBase → FilePathsBaseTestExt 981.6 ms ✓ FilePathsBase → FilePathsBaseMmapExt 1061.2 ms ✓ FLoopsBase 28343.2 ms ✓ PrettyTables 4018.9 ms ✓ ArnoldiMethod 1643.5 ms ✓ StaticArrays → StaticArraysStatisticsExt 1603.2 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1995.5 ms ✓ Accessors → StaticArraysExt 4191.1 ms ✓ JSON 1108.4 ms ✓ InlineStrings → ParsersExt 5684.2 ms ✓ JLD2 → UnPackExt 1077.5 ms ✓ StringEncodings 1679.8 ms ✓ XML2_jll 2368.9 ms ✓ MbedTLS 2035.5 ms ✓ Git_jll 1809.2 ms ✓ BangBang 78133.2 ms ✓ DataFrames 10168.4 ms ✓ Graphs 3384.9 ms ✓ BenchmarkTools 2965.5 ms ✓ WeakRefStrings 2912.9 ms ✓ YAML 2210.8 ms ✓ EzXML 28067.8 ms ✓ HTTP 1544.7 ms ✓ Git 1659.2 ms ✓ BangBang → BangBangTablesExt 2066.8 ms ✓ BangBang → BangBangStaticArraysExt 3445.0 ms ✓ MicroCollections 7377.1 ms ✓ BangBang → BangBangDataFramesExt 11999.8 ms ✓ MetaGraphsNext 29837.5 ms ✓ CSV 3034.2 ms ✓ XLSX 7663.6 ms ✓ FileIO → HTTPExt 54991.9 ms ✓ Documenter 8897.4 ms ✓ Transducers 20427.8 ms ✓ PlantMeteo 18466.9 ms ✓ MultiScaleTreeGraph 7014.2 ms ✓ Transducers → TransducersDataFramesExt 17262.4 ms ✓ FLoops 68335.2 ms ✓ PlantSimEngine 136 dependencies successfully precompiled in 806 seconds. 38 already precompiled. Precompilation completed after 805.44s ################################################################################ # Testing # Testing PlantSimEngine Status `/tmp/jl_TyZLKD/Project.toml` [4c88cf16] Aqua v0.8.14 [6e4b80f9] BenchmarkTools v1.6.3 [336ed68f] CSV v0.10.15 [a93c6f00] DataFrames v1.8.1 [e30172f5] Documenter v1.16.1 [dd4a991b] MultiScaleTreeGraph v0.14.4 [4630fe09] PlantMeteo v0.6.1 [9a576370] PlantSimEngine v0.13.2 [10745b16] Statistics v1.11.1 [bd369af6] Tables v1.12.1 [ade2ca70] Dates v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_TyZLKD/Manifest.toml` [a4c015fc] ANSIColoredPrinters v0.0.1 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.43 [4c88cf16] Aqua v0.8.14 [dce04be8] ArgCheck v2.5.0 [ec485272] ArnoldiMethod v0.4.0 [198e06fe] BangBang v0.4.6 [9718e550] Baselet v0.1.1 [6e4b80f9] BenchmarkTools v1.6.3 [d1d4a3ce] BitFlags v0.1.9 [336ed68f] CSV v0.10.15 [0b6fb165] ChunkCodecCore v1.0.1 [4c0bbee4] ChunkCodecLibZlib v1.0.0 [55437552] ChunkCodecLibZstd v1.0.0 [da1fd8a2] CodeTracking v3.0.0 [6309b1aa] CodecInflate64 v0.1.3 [944b1d66] CodecZlib v0.7.8 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [f0e56b4a] ConcurrentUtilities v2.5.0 [187b0558] ConstructionBase v1.6.0 [6add18c4] ContextVariablesX v0.1.3 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [244e2a9f] DefineSingletons v0.1.2 [8bb1440f] DelimitedFiles v1.9.1 [ffbed154] DocStringExtensions v0.9.5 [e30172f5] Documenter v1.16.1 [460bff9d] ExceptionUnwrapping v0.1.11 [8f5d6c58] EzXML v1.2.3 [cc61a311] FLoops v0.2.2 [b9860ae5] FLoopsBase v0.1.1 [5789e2e9] FileIO v1.17.1 [48062228] FilePathsBase v0.9.24 [d7ba0133] Git v1.5.0 [86223c79] Graphs v1.13.3 [cd3eb016] HTTP v1.10.19 [076d061b] HashArrayMappedTries v0.2.0 [eafb193a] Highlights v0.5.3 [b5f81e59] IOCapture v1.0.0 [d25df0c9] Inflate v0.1.5 [22cec73e] InitialValues v0.3.1 [842dd82b] InlineStrings v1.4.5 [0c81fc1b] InputBuffers v1.1.1 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.6.3 [692b3bcd] JLLWrappers v1.7.1 ⌅ [682c06a0] JSON v0.21.4 [b14d175d] JuliaVariables v0.2.4 [b964fa9f] LaTeXStrings v1.4.0 [0e77f7df] LazilyInitializedFields v1.3.0 [e6f89c97] LoggingExtras v1.2.0 [d8e11817] MLStyle v0.4.17 [1914dd2f] MacroTools v0.5.16 [d0879d2d] MarkdownAST v0.1.2 [739be429] MbedTLS v1.1.9 [fa8bd995] MetaGraphsNext v0.7.5 [128add7d] MicroCollections v0.2.0 [e1d29d7a] Missings v1.2.0 [dd4a991b] MultiScaleTreeGraph v0.14.4 [af6c499f] MutableNamedTuples v0.1.3 [1c23619d] MyterialColors v0.3.0 [71a1bf82] NameResolution v0.1.5 [4d8831e6] OpenSSL v1.6.1 [bac558e1] OrderedCollections v1.8.1 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [4630fe09] PlantMeteo v0.6.1 [9a576370] PlantSimEngine v0.13.2 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.1 [8162dcfd] PrettyPrint v0.2.0 ⌅ [08abe8d2] PrettyTables v2.4.0 [33c8b6b6] ProgressLogging v0.1.6 [189a3867] Reexport v1.2.2 [2792f1a3] RegistryInstances v0.1.0 [ae029012] Requires v1.3.1 [7e506255] ScopedValues v1.5.0 [91c51154] SentinelArrays v1.4.9 [efcf1570] Setfield v1.1.2 [777ac1f9] SimpleBufferStream v1.2.0 [699a6c99] SimpleTraits v0.9.5 [a2af1166] SortingAlgorithms v1.2.2 [171d559e] SplittablesBase v0.1.15 [90137ffa] StaticArrays v1.9.16 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [69024149] StringEncodings v0.3.7 [892a3eda] StringManipulation v0.4.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [22787eb5] Term v2.0.8 [3bb67fe8] TranscodingStreams v0.11.3 [28d57a85] Transducers v0.4.85 [5c2747f8] URIs v1.6.1 [3a884ed6] UnPack v1.0.2 [1cfade01] UnicodeFun v0.4.1 [ea10d353] WeakRefStrings v1.4.2 [76eceee3] WorkerUtilities v1.6.1 [fdbf4ff8] XLSX v0.10.4 [ddb6d928] YAML v0.4.16 [49080126] ZipArchives v2.6.0 [a5390f91] ZipFile v0.10.1 [2e619515] Expat_jll v2.7.3+0 [020c3dae] Git_LFS_jll v3.7.0+0 [f8c6e375] Git_jll v2.52.0+0 [94ce4f54] Libiconv_jll v1.18.0+0 [c8ffd9c3] MbedTLS_jll v2.28.1010+0 [9bd350c2] OpenSSH_jll v10.2.1+0 [02c8fc9c] XML2_jll v2.15.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [9abbd945] Profile v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.18.0+0 [e37daf67] LibGit2_jll v1.9.2+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ┌ Warning: Ignoring incompatible compat entry `SHA = "0.7.0"` in "/home/pkgeval/.julia/packages/PlantSimEngine/AQ037/Project.toml". │ SHA is a non-upgradable standard library with version 1.0.0 in the current Julia version. │ Fix by setting compat to "0.7.0, 1" to mark support of the current version 1.0.0. └ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:517 [ Info: Some variables must be initialized before simulation: (process1 = (:var1, :var2), process2 = (:var1,)) (see `to_initialize()`) [ Info: Model Process3Model from process process3 needs a model that is a subtype of Process2Model in process process2, but the process is not parameterized in the ModelList. ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Process1Model, Process2Model, PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, PlantSimEngine.HelperNextTimestepModel, MultiScaleModel{PlantSimEngine.HelperCurrentTimestepModel, Vector{Pair{Union{Symbol, PreviousTimeStep}, Union{Pair{String, Symbol}, Vector{Pair{String, Symbol}}}}}}, Status{(:var1, :var2, :current_timestep, :next_timestep), Tuple{Base.RefValue{Float64}, Base.RefValue{Float64}, Base.RefValue{Int64}, Base.RefValue{Int64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Process1Model, Process2Model, PlantSimEngine.HelperNextTimestepModel, MultiScaleModel{PlantSimEngine.HelperCurrentTimestepModel, Vector{Pair{Union{Symbol, PreviousTimeStep}, Union{Pair{String, Symbol}, Vector{Pair{String, Symbol}}}}}}, Status{(:var1, :var2, :current_timestep, :next_timestep), Tuple{Base.RefValue{Float64}, Base.RefValue{Float64}, Base.RefValue{Int64}, Base.RefValue{Int64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 WARNING: Method definition process_(Type{PlantSimEngine.AbstractTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Array{Float64, 1}) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Any) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition inputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition outputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})() in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{ToyLAIModel, Beer{Float64}, ToyRUEGrowthModel{Float64}, PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, PlantSimEngine.HelperNextTimestepModel, MultiScaleModel{PlantSimEngine.HelperCurrentTimestepModel, Vector{Pair{Union{Symbol, PreviousTimeStep}, Union{Pair{String, Symbol}, Vector{Pair{String, Symbol}}}}}}, Status{(:current_timestep, :next_timestep), Tuple{Base.RefValue{Int64}, Base.RefValue{Int64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 WARNING: Method definition process_(Type{PlantSimEngine.AbstractTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Array{Float64, 1}) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Any) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition inputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition outputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})() in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition process_(Type{PlantSimEngine.AbstractTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Array{Float64, 1}) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Any) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition inputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition outputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})() in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition process_(Type{PlantSimEngine.AbstractTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Array{Float64, 1}) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Any) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition inputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition outputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})() in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition process_(Type{PlantSimEngine.AbstractTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Array{Float64, 1}) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Any) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition inputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition outputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})() in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition process_(Type{PlantSimEngine.AbstractTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Array{Float64, 1}) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Any) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition inputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition outputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})() in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition process_(Type{PlantSimEngine.AbstractTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Array{Float64, 1}) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Any) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition inputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition outputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})() in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition process_(Type{PlantSimEngine.AbstractTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Array{Float64, 1}) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Any) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition inputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition outputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})() in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Process1Model, Process2Model, Process3Model, PlantSimEngine.HelperNextTimestepModel, MultiScaleModel{PlantSimEngine.HelperCurrentTimestepModel, Vector{Pair{Union{Symbol, PreviousTimeStep}, Union{Pair{String, Symbol}, Vector{Pair{String, Symbol}}}}}}, Status{(:var1, :var2, :current_timestep, :next_timestep), Tuple{Base.RefValue{Float64}, Base.RefValue{Float64}, Base.RefValue{Int64}, Base.RefValue{Int64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Process1Model, Process2Model, Process3Model, Process4Model, Process5Model, Process6Model, PlantSimEngine.HelperNextTimestepModel, MultiScaleModel{PlantSimEngine.HelperCurrentTimestepModel, Vector{Pair{Union{Symbol, PreviousTimeStep}, Union{Pair{String, Symbol}, Vector{Pair{String, Symbol}}}}}}, Status{(:var9, :var0, :current_timestep, :next_timestep), Tuple{Base.RefValue{Float64}, Base.RefValue{Float64}, Base.RefValue{Int64}, Base.RefValue{Int64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Process1Model, Process2Model, Process3Model, Process4Model, Process5Model, Process6Model, Process7Model, PlantSimEngine.HelperNextTimestepModel, MultiScaleModel{PlantSimEngine.HelperCurrentTimestepModel, Vector{Pair{Union{Symbol, PreviousTimeStep}, Union{Pair{String, Symbol}, Vector{Pair{String, Symbol}}}}}}, Status{(:var0, :current_timestep, :next_timestep), Tuple{Base.RefValue{Float64}, Base.RefValue{Int64}, Base.RefValue{Int64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Process1Model, Process2Model, Process3Model, Process4Model, Process5Model, PlantSimEngine.HelperNextTimestepModel, MultiScaleModel{PlantSimEngine.HelperCurrentTimestepModel, Vector{Pair{Union{Symbol, PreviousTimeStep}, Union{Pair{String, Symbol}, Vector{Pair{String, Symbol}}}}}}, Status{(:var0, :current_timestep, :next_timestep), Tuple{Base.RefValue{Float64}, Base.RefValue{Int64}, Base.RefValue{Int64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Any, Vararg{Any}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: A parallel executor was provided (`executor=ThreadedEx()`) but some models cannot be run in parallel: ToyRUEGrowthModel{Float64}(0.3). The simulation will be run sequentially. Use `executor=SequentialEx()` to remove this warning. └ @ PlantSimEngine ~/.julia/packages/PlantSimEngine/AQ037/src/run.jl:210 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{ToyLAIModel, Beer{Float64}, ToyRUEGrowthModel{Float64}, ToyTestDegreeDaysCumulModel, PlantSimEngine.HelperNextTimestepModel, MultiScaleModel{PlantSimEngine.HelperCurrentTimestepModel, Vector{Pair{Union{Symbol, PreviousTimeStep}, Union{Pair{String, Symbol}, Vector{Pair{String, Symbol}}}}}}, Status{(:current_timestep, :next_timestep), Tuple{Base.RefValue{Int64}, Base.RefValue{Int64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 WARNING: Method definition process_(Type{PlantSimEngine.AbstractTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Array{Float64, 1}) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Any) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition inputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition outputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})() in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition process_(Type{PlantSimEngine.AbstractTtf3920A5Fb90905Db0Ee6F0Fece74Bea7F10349FdModel}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTtf3920A5Fb90905Db0Ee6F0Fece74Bea7F10349FdModel})(Array{Float64, 1}) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTtf3920A5Fb90905Db0Ee6F0Fece74Bea7F10349FdModel})(Any) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition inputs_(PlantSimEngine.MyTtf3920A5Fb90905Db0Ee6F0Fece74Bea7F10349FdModel) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition outputs_(PlantSimEngine.MyTtf3920A5Fb90905Db0Ee6F0Fece74Bea7F10349FdModel) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTtf3920A5Fb90905Db0Ee6F0Fece74Bea7F10349FdModel})() in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, Type{PlantSimEngine.MyTtf3920A5Fb90905Db0Ee6F0Fece74Bea7F10349FdModel}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTtf3920A5Fb90905Db0Ee6F0Fece74Bea7F10349FdModel, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTtf3920A5Fb90905Db0Ee6F0Fece74Bea7F10349FdModel, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTtf3920A5Fb90905Db0Ee6F0Fece74Bea7F10349FdModel, Any, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). [ Info: Model Process3Model from process process3 needs a model that is a subtype of Process2Model in process process2, but the process is not parameterized in the ModelList. ┌ Warning: Parallelisation over objects was removed, (but may be reintroduced in the future). Parallelisation will only occur over timesteps. └ @ PlantSimEngine ~/.julia/packages/PlantSimEngine/AQ037/src/run.jl:283 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Process1Model, Process2Model, Process3Model, PlantSimEngine.MyVar10Ed51173F59F729F7656506E6F391Bd2F66B96A7Model, PlantSimEngine.HelperNextTimestepModel, MultiScaleModel{PlantSimEngine.HelperCurrentTimestepModel, Vector{Pair{Union{Symbol, PreviousTimeStep}, Union{Pair{String, Symbol}, Vector{Pair{String, Symbol}}}}}}, Status{(:var2, :current_timestep, :next_timestep), Tuple{Base.RefValue{Float64}, Base.RefValue{Int64}, Base.RefValue{Int64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: Parallelisation over objects was removed, (but may be reintroduced in the future). Parallelisation will only occur over timesteps. └ @ PlantSimEngine ~/.julia/packages/PlantSimEngine/AQ037/src/run.jl:154 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Process1Model, Process2Model, Process3Model}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 Issue in function #155 for node #3. 2 2 1 2 2 2 2 2 3 2 2 4 2 2 5 2 3 1 2 3 2 2 3 3 2 3 4 2 3 5 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Any}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Process1Model, Status{(:var1, :var2), Tuple{Base.RefValue{Float64}, Base.RefValue{Float64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Process1Model, Process2Model, Process3Model, Status{(:var1,), Tuple{Base.RefValue{Float64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 inputs and outputs of a mapping: Test Failed at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:111 Expression: collect(keys(ins)) == collect(keys(mapping_1)) Evaluated: ["Plant", "Internode", "Leaf", "Soil"] == ["Soil", "Internode", "Leaf", "Plant"] Stacktrace: [1] top-level scope @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:109 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:111 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] inputs and outputs of a mapping: Test Failed at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:116 Expression: collect(keys(outs)) == collect(keys(mapping_1)) Evaluated: ["Plant", "Internode", "Leaf", "Soil"] == ["Soil", "Internode", "Leaf", "Plant"] Stacktrace: [1] top-level scope @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:109 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:116 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] inputs and outputs of a mapping: Test Failed at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:122 Expression: collect(keys(vars)) == collect(keys(mapping_1)) Evaluated: ["Plant", "Internode", "Leaf", "Soil"] == ["Soil", "Internode", "Leaf", "Plant"] Stacktrace: [1] top-level scope @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:109 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:122 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] Issue in function #155 for node #4. Status initialisation: Test Failed at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:133 Expression: collect(keys(organs_statuses)) == ["Soil", "Internode", "Plant", "Leaf"] Evaluated: ["Plant", "Internode", "Leaf", "Soil"] == ["Soil", "Internode", "Plant", "Leaf"] Stacktrace: [1] top-level scope @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:130 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:133 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] ┌ Warning: Promoting `carbon_biomass` value taken from MTG node 4 (Internode) from Float64 to Float32: 1.0 (Float32) └ @ PlantSimEngine ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/initialisation.jl:128 ┌ Warning: Promoting `carbon_biomass` value taken from MTG node 5 (Leaf) from Float64 to Float32: 1.0 (Float32) └ @ PlantSimEngine ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/initialisation.jl:128 ┌ Warning: Promoting `carbon_biomass` value taken from MTG node 6 (Internode) from Float64 to Float32: 1.0 (Float32) └ @ PlantSimEngine ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/initialisation.jl:128 ┌ Warning: Promoting `carbon_biomass` value taken from MTG node 7 (Leaf) from Float64 to Float32: 1.0 (Float32) └ @ PlantSimEngine ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/initialisation.jl:128 Multiscale initialisations and outputs: Test Failed at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:173 Expression: collect(keys(organs_statuses)) == ["Soil", "Internode", "Plant", "Leaf"] Evaluated: ["Plant", "Internode", "Leaf", "Soil"] == ["Soil", "Internode", "Plant", "Leaf"] Stacktrace: [1] top-level scope @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:162 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:173 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] Multiscale initialisations and outputs: Test Failed at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:198 Expression: collect(keys(statuses)) == ["Soil", "Internode", "Plant", "Leaf"] Evaluated: ["Plant", "Internode", "Leaf", "Soil"] == ["Soil", "Internode", "Plant", "Leaf"] Stacktrace: [1] top-level scope @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:162 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:198 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] Multiscale initialisations and outputs: Test Failed at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:210 Expression: PlantSimEngine.pre_allocate_outputs(statuses, status_templates, reverse_multiscale_mapping, vars_need_init, outs, nsteps) Expected: "You requested outputs for organs Soil, Flowers, Leaf, but organs Flowers have no models." Message: "You requested outputs for organs Leaf, Flowers, Soil, but organs Flowers have no models." Stacktrace: [1] top-level scope @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:162 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [3] macro expansion @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:210 [inlined] Multiscale initialisations and outputs: Log Test Failed at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:213 Expression: PlantSimEngine.pre_allocate_outputs(statuses, status_templates, reverse_multiscale_mapping, vars_need_init, outs, nsteps, check = false) Log Pattern: (:info, "You requested outputs for organs Soil, Flowers, Leaf, but organs Flowers have no models.") (:info, "You requested outputs for variable non_existing_variable in organ Leaf, but it has no model.") Captured Logs: LogRecord(Info, "You requested outputs for organs Leaf, Flowers, Soil, but organs Flowers have no models.", PlantSimEngine, :save_results, :PlantSimEngine_c48e0fd1, "/home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/mtg/save_results.jl", 161, Base.Pairs{Symbol, Union{}, Nothing, @NamedTuple{}}()) LogRecord(Info, "You requested outputs for variable non_existing_variable in organ Leaf, but it has no model.", PlantSimEngine, :save_results, :PlantSimEngine_c48e0fd2, "/home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/mtg/save_results.jl", 184, Base.Pairs{Symbol, Union{}, Nothing, @NamedTuple{}}()) Stacktrace: [1] record(ts::Test.DefaultTestSet, t::Test.LogTestFailure) @ Test /opt/julia/share/julia/stdlib/v1.14/Test/src/logging.jl:166 [2] top-level scope @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:162 [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [4] macro expansion @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:213 [inlined] ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{ToySoilWaterModel{Vector{Float64}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{ToyCDemandModel{Float64}, Status{(:TT,), Tuple{Base.RefValue{Float64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 Issue in function #155 for node #3. Issue in function #155 for node #5. ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Process1Model, Process2Model, Process3Model, Status{(:var1, :var2), Tuple{Base.RefValue{Float64}, Base.RefValue{Float64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Any, Any, Any, Vararg{Status{(:TT,), Tuple{Base.RefValue{Float64}}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Any, MultiScaleModel{T, Vector{Pair{Union{Symbol, PreviousTimeStep}, Union{Pair{String, Symbol}, Vector{Pair{String, Symbol}}}}}} where T<:AbstractModel, Any, Vararg{Status{(:TT,), Tuple{Base.RefValue{Float64}}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 Cyclic dependency -> fixed with `PreviousTimeStep`: Test Failed at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale-cyclic-dep.jl:96 Expression: dep(mapping_nocyclic) Expected stderr: "" (nowarn) Captured stderr: "┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead.\n│ caller = mapped_variables(mapping::Dict{String, Tuple{Any, MultiScaleModel{T, Vector{Pair{Union{Symbol, PreviousTimeStep}, Union{Pair{String, Symbol}, Vector{Pair{String, Symbol}}}}}} where T<:AbstractModel, Any, Vararg{Status{(:TT,), Tuple{Base.RefValue{Float64}}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28\n└ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28\n" Stacktrace: [1] record(ts::Test.DefaultTestSet, t::Union{Test.Error, Test.Fail}; print_result::Bool) @ Test /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1573 [2] record(ts::Test.DefaultTestSet, t::Union{Test.Error, Test.Fail}) @ Test /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1565 [3] top-level scope @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale-cyclic-dep.jl:60 [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [5] macro expansion @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale-cyclic-dep.jl:96 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1334 [inlined] ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 560 running 1 of 1 signal (10): User defined signal 1 _ZN4llvm26LiveRegMatrixWrapperLegacyD0Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm13PMDataManagerD1Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm13FPPassManagerD0Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm13PMDataManagerD1Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZThn32_N12_GLOBAL__N_113MPPassManagerD0Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm17PMTopLevelManagerD1Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm6legacy15PassManagerImplD0Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm6legacy11PassManagerD1Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) operator() at /source/src/jitlayers.cpp:1626 addModule at /source/src/jitlayers.cpp:2123 jl_compile_codeinst_now at /source/src/jitlayers.cpp:685 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:879 jl_compile_method_internal at /source/src/gf.c:3648 _jl_invoke at /source/src/gf.c:4108 [inlined] ijl_apply_generic at /source/src/gf.c:4313 save_results! at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/mtg/save_results.jl:301 #run!#233 at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/run.jl:421 run! at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/run.jl:388 [inlined] #run!#213 at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/run.jl:125 [inlined] run! at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/run.jl:116 [inlined] run! at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/run.jl:116 unknown function (ip: 0x72362a903c56) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_body at /source/src/interpreter.c:581 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:765 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:779 ijl_toplevel_eval_in at /source/src/toplevel.c:824 eval at ./boot.jl:489 include_string at ./loading.jl:3150 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _include at ./loading.jl:3210 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 unknown function (ip: 0x72364a39c592) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:765 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:779 ijl_toplevel_eval_in at /source/src/toplevel.c:824 eval at ./boot.jl:489 include_string at ./loading.jl:3150 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _include at ./loading.jl:3210 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_68725.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:765 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:779 ijl_toplevel_eval_in at /source/src/toplevel.c:824 eval at ./boot.jl:489 exec_options at ./client.jl:310 _start at ./client.jl:585 jfptr__start_71356.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x723660554249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== Cyclic dependency -> fixed with `PreviousTimeStep`: ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361 Test FailedOverhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x0000723645ffc010 Total snapshots: 10. Utilization: 100% ╎10 @Base/client.jl:585 _start() ╎ 10 @Base/client.jl:310 exec_options(opts::Base.JLOptions) ╎ 10 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ 10 @Base/Base.jl:311 (::Base.IncludeInto)(fname::String) ╎ 10 @Base/Base.jl:310 include(mapexpr::Function, mod::Module, _path::Stri… ╎ 10 @Base/loading.jl:3210 _include(mapexpr::Function, mod::Module, _path… ╎ ╎ 10 @Base/loading.jl:3150 include_string(mapexpr::typeof(identity), mod… ╎ ╎ 10 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ 10 @Base/Base.jl:311 (::Base.IncludeInto)(fname::String) ╎ ╎ 10 @Base/Base.jl:310 include(mapexpr::Function, mod::Module, _path:… ╎ ╎ 10 @Base/loading.jl:3210 _include(mapexpr::Function, mod::Module, … ╎ ╎ ╎ 10 @Base/loading.jl:3150 include_string(mapexpr::typeof(identity)… ╎ ╎ ╎ 10 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ ╎ 10 @PlantSimEngine/…jl:116 run!(object::PlantSimEngine.GraphSim… ╎ ╎ ╎ 10 @PlantSimEngine/…jl:116 run! ╎ ╎ ╎ 10 @PlantSimEngine/…l:125 #run!#213 ╎ ╎ ╎ ╎ 10 @PlantSimEngine/…l:388 run! ╎ ╎ ╎ ╎ 10 @PlantSimEngine/…l:421 run!(::PlantSimEngine.TreeAlike, … ╎ ╎ ╎ ╎ 10 @PlantSimEngine/…:296 save_results!(object::PlantSimEng… ╎ ╎ ╎ ╎ 10 @Base/…tarray.jl:2132 cat ╎ ╎ ╎ ╎ 10 @Base/…tarray.jl:2132 #cat#108 ╎ ╎ ╎ ╎ ╎ 10 @Compiler/…er.jl:1724 typeinf_ext_toplevel(mi::Core.… ╎ ╎ ╎ ╎ ╎ 10 @Compiler/…r.jl:1715 typeinf_ext_toplevel ╎ ╎ ╎ ╎ ╎ 10 @Compiler/…r.jl:1532 typeinf_ext(interp::Compiler.… ╎ ╎ ╎ ╎ ╎ 6 @Compiler/….jl:4568 typeinf(interp::Compiler.Nati… ╎ ╎ ╎ ╎ ╎ 6 @Compiler/….jl:4376 typeinf_local(interp::Compil… ╎ ╎ ╎ ╎ ╎ ╎ 6 @Compiler/….jl:3823 abstract_eval_basic_stateme… ╎ ╎ ╎ ╎ ╎ ╎ 6 @Compiler/…jl:3866 abstract_eval_basic_stateme… ╎ ╎ ╎ ╎ ╎ ╎ 6 @Compiler/…jl:3467 abstract_eval_statement_ex… ╎ ╎ ╎ ╎ ╎ ╎ 6 @Compiler/…l:3103 abstract_eval_call ╎ ╎ ╎ ╎ ╎ ╎ 6 @Compiler/…l:3085 abstract_call(interp::Com… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 6 @Compiler/…l:2925 abstract_call ╎ ╎ ╎ ╎ ╎ ╎ ╎ 6 @Compiler/…l:2932 abstract_call(interp::C… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:2709 abstract_call_known(in… 1╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:2036 abstract_call_builtin… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 5 @Compiler/…l:2822 abstract_call_known(in… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 5 @Compiler/…l:328 abstract_call_gf_by_ty… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 4 @Compiler/…l:166 (::Compiler.var"#infe… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 4 @Compiler/…l:728 abstract_call_method… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 4 @Compiler/…l:1142 typeinf_edge(inter… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 4 @Base/…ls.jl:1777 specialize_method 3╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 4 @Base/…ls.jl:1790 #specialize_meth… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:247 (::Compiler.var"#infe… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:177 (::Compiler.var"#han… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:861 abstract_call_metho… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:886 abstract_call_meth… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:1259 semi_concrete_ev… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:877 Compiler.IRInter… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +1 1 @Compiler/…l:59 inflate_ir ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +2 1 @Base/…pr.jl:87 copy(c::Core.Code… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +3 1 @Base/…ay.jl:384 copy 1╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +4 1 @Base/…ot.jl:615 GenericMemory ╎ ╎ ╎ ╎ ╎ 4 @Compiler/….jl:4575 typeinf(interp::Compiler.Nati… ╎ ╎ ╎ ╎ ╎ 4 @Compiler/….jl:278 finish_nocycle(interp::Compil… ╎ ╎ ╎ ╎ ╎ ╎ 4 @Compiler/….jl:1021 optimize(interp::Compiler.N… ╎ ╎ ╎ ╎ ╎ ╎ 4 @Compiler/…jl:1048 run_passes_ipo_safe ╎ ╎ ╎ ╎ ╎ ╎ 4 @Compiler/…jl:1035 run_passes_ipo_safe(ci::Co… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:1330 slot2reg ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…jl:45 scan_slot_def_use(nargs::I… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:17 scan_entry!(result::Vector… 1╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…pr.jl:42 isexpr ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:76 ssa_inlining_pass! ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:1601 assemble_inline_todo!(ir:… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:1354 handle_call! ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:1322 compute_inlining_cases(… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:1258 handle_any_call_result! ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:1269 handle_any_call_resul… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:1362 handle_call_result! ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:1373 handle_call_result!… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:870 analyze_method! ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:904 analyze_method!(ca… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:851 resolve_todo(mi::… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:918 retrieve_ir_for_… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +1 1 @Compiler/…l:20 inflate_ir!(ci::C… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +2 1 @Compiler/…l:24 inflate_ir!(ci::C… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +3 1 @Compiler/…l:96 compute_basic_blo… 1╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +4 1 @Compiler/…l:0 basic_blocks_starts ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:1338 compute_inlining_cases(… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:1258 handle_any_call_result! ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:1269 handle_any_call_resul… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:1362 handle_call_result! ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:1373 handle_call_result!… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:870 analyze_method! ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:904 analyze_method!(ca… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:851 resolve_todo(mi::… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:918 retrieve_ir_for_… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +1 1 @Compiler/…l:20 inflate_ir!(ci::C… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +2 1 @Compiler/…l:24 inflate_ir!(ci::C… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +3 1 @Compiler/…l:111 compute_basic_bl… 1╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +4 1 @Base/…ls.jl:965 getindex ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:1555 sroa_pass!(ir::Compiler.IR… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:1871 iterate ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:1949 iterate_compact(compact:… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:1535 process_node!(compact::… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:1350 renumber_ssa2!(stmt::A… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:660 iterate ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:661 iterate 1╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:653 _advance(stmt::Any, … at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale-cyclic-dep.jl:111 Expression: run!(sim, meteo) Expected stderr: "" (nowarn) Captured stderr: "\n======================================================================================\nInformation request received. A stacktrace will print followed by a 1.0 second profile.\n--trace-compile is enabled during profile collection.\n======================================================================================\n\ncmd: /opt/julia/bin/julia 560 running 1 of 1\n\nsignal (10): User defined signal 1\n_ZN4llvm26LiveRegMatrixWrapperLegacyD0Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line)\n_ZN4llvm13PMDataManagerD1Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line)\n_ZN4llvm13FPPassManagerD0Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line)\n_ZN4llvm13PMDataManagerD1Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line)\n_ZThn32_N12_GLOBAL__N_113MPPassManagerD0Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line)\n_ZN4llvm17PMTopLevelManagerD1Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line)\n_ZN4llvm6legacy15PassManagerImplD0Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line)\n_ZN4llvm6legacy11PassManagerD1Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line)\noperator() at /source/src/jitlayers.cpp:1626\naddModule at /source/src/jitlayers.cpp:2123\njl_compile_codeinst_now at /source/src/jitlayers.cpp:685\njl_compile_codeinst_impl at /source/src/jitlayers.cpp:879\njl_compile_method_internal at /source/src/gf.c:3648\n_jl_invoke at /source/src/gf.c:4108 [inlined]\nijl_apply_generic at /source/src/gf.c:4313\nsave_results! at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/mtg/save_results.jl:301\n#run!#233 at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/run.jl:421\nrun! at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/run.jl:388 [inlined]\n#run!#213 at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/run.jl:125 [inlined]\nrun! at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/run.jl:116 [inlined]\nrun! at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/run.jl:116\nunknown function (ip: 0x72362a903c56) at (unknown file)\n_jl_invoke at /source/src/gf.c:4116 [inlined]\nijl_apply_generic at /source/src/gf.c:4313\njl_apply at /source/src/julia.h:2285 [inlined]\ndo_call at /source/src/interpreter.c:123\neval_value at /source/src/interpreter.c:243\neval_body at /source/src/interpreter.c:581\neval_body at /source/src/interpreter.c:558\neval_body at /source/src/interpreter.c:558\neval_body at /source/src/interpreter.c:550\neval_body at /source/src/interpreter.c:558\neval_body at /source/src/interpreter.c:558\neval_body at /source/src/interpreter.c:558\njl_interpret_toplevel_thunk at /source/src/interpreter.c:884\nijl_eval_thunk at /source/src/toplevel.c:765\njl_toplevel_eval_flex at /source/src/toplevel.c:712\njl_eval_toplevel_stmts at /source/src/toplevel.c:602\njl_toplevel_eval_flex at /source/src/toplevel.c:684\nijl_toplevel_eval at /source/src/toplevel.c:779\nijl_toplevel_eval_in at /source/src/toplevel.c:824\neval at ./boot.jl:489\ninclude_string at ./loading.jl:3150\n_jl_invoke at /source/src/gf.c:4116 [inlined]\nijl_apply_generic at /source/src/gf.c:4313\n_include at ./loading.jl:3210\ninclude at ./Base.jl:310\nIncludeInto at ./Base.jl:311\nunknown function (ip: 0x72364a39c592) at (unknown file)\n_jl_invoke at /source/src/gf.c:4116 [inlined]\nijl_apply_generic at /source/src/gf.c:4313\njl_apply at /source/src/julia.h:2285 [inlined]\ndo_call at /source/src/interpreter.c:123\neval_value at /source/src/interpreter.c:243\neval_stmt_value at /source/src/interpreter.c:194 [inlined]\neval_body at /source/src/interpreter.c:693\neval_body at /source/src/interpreter.c:550\neval_body at /source/src/interpreter.c:558\neval_body at /source/src/interpreter.c:558\neval_body at /source/src/interpreter.c:558\neval_body at /source/src/interpreter.c:550\neval_body at /source/src/interpreter.c:558\neval_body at /source/src/interpreter.c:558\neval_body at /source/src/interpreter.c:558\njl_interpret_toplevel_thunk at /source/src/interpreter.c:884\nijl_eval_thunk at /source/src/toplevel.c:765\njl_toplevel_eval_flex at /source/src/toplevel.c:712\njl_eval_toplevel_stmts at /source/src/toplevel.c:602\njl_toplevel_eval_flex at /source/src/toplevel.c:684\nijl_toplevel_eval at /source/src/toplevel.c:779\nijl_toplevel_eval_in at /source/src/toplevel.c:824\neval at ./boot.jl:489\ninclude_string at ./loading.jl:3150\n_jl_invoke at /source/src/gf.c:4116 [inlined]\nijl_apply_generic at /source/src/gf.c:4313\n_include at ./loading.jl:3210\ninclude at ./Base.jl:310\nIncludeInto at ./Base.jl:311\njfptr_IncludeInto_68725.1 at /opt/julia/lib/julia/sys.so (unknown line)\n_jl_invoke at /source/src/gf.c:4116 [inlined]\nijl_apply_generic at /source/src/gf.c:4313\njl_apply at /source/src/julia.h:2285 [inlined]\ndo_call at /source/src/interpreter.c:123\neval_value at /source/src/interpreter.c:243\neval_stmt_value at /source/src/interpreter.c:194 [inlined]\neval_body at /source/src/interpreter.c:693\njl_interpret_toplevel_thunk at /source/src/interpreter.c:884\nijl_eval_thunk at /source/src/toplevel.c:765\njl_toplevel_eval_flex at /source/src/toplevel.c:712\njl_eval_toplevel_stmts at /source/src/toplevel.c:602\njl_toplevel_eval_flex at /source/src/toplevel.c:684\nijl_toplevel_eval at /source/src/toplevel.c:779\nijl_toplevel_eval_in at /source/src/toplevel.c:824\neval at ./boot.jl:489\nexec_options at ./client.jl:310\n_start at ./client.jl:585\njfptr__start_71356.1 at /opt/julia/lib/julia/sys.so (unknown line)\n_jl_invoke at /source/src/gf.c:4116 [inlined]\nijl_apply_generic at /source/src/gf.c:4313\njl_apply at /source/src/julia.h:2285 [inlined]\ntrue_main at /source/src/jlapi.c:971\njl_repl_entrypoint at /source/src/jlapi.c:1138\nmain at /source/cli/loader_exe.c:58\nunknown function (ip: 0x723660554249) at /lib/x86_64-linux-gnu/libc.so.6\n__libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)\nunknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S\nunknown function (ip: (nil)) at (unknown file)\n\n\n==============================================================\nProfile collected. A report will print at the next yield point.\nDisabling --trace-compile\n==============================================================\n\n" Stacktrace: [1] record(ts::Test.DefaultTestSet, t::Union{Test.Error, Test.Fail}; print_result::Bool) @ Test /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1573 [2] record(ts::Test.DefaultTestSet, t::Union{Test.Error, Test.Fail}) @ Test /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1565 [3] top-level scope @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale-cyclic-dep.jl:60 [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [5] macro expansion @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale-cyclic-dep.jl:111 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1334 [inlined] ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1246 wait_forever at ./task.jl:1168 jfptr_wait_forever_50649.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] start_task at /source/src/task.c:1275 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000074a1625c9a50 Total snapshots: 349. Utilization: 0% ╎349 @Base/task.jl:1168 wait_forever() 348╎ 349 @Base/task.jl:1246 wait() PkgEval terminated after 2721.77s: test duration exceeded the time limit