Package evaluation to test PathWeightSampling on Julia 1.14.0-DEV.1584 (ac5fadde9b*) started at 2026-01-19T03:17:07.207 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 8.33s ################################################################################ # Installation # Installing PathWeightSampling... Resolving package versions... Installed PathWeightSampling ─ v0.2.0 Updating `~/.julia/environments/v1.14/Project.toml` [e595aebf] + PathWeightSampling v0.2.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [47edcb42] + ADTypes v1.21.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.43 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.22.0 [4c555306] + ArrayLayouts v1.12.2 [198e06fe] + BangBang v0.4.6 [9718e550] + Baselet v0.1.1 [c3b6d118] + BitIntegers v0.3.7 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] + BracketingNonlinearSolve v1.6.2 [2a0fbf3d] + CPUSummary v0.2.7 [d360d2e6] + ChainRulesCore v1.26.0 [0b6fb165] + ChunkCodecCore v1.0.1 [653b0ff7] + ChunkCodecLibBrotli v1.0.0 [7e9cc85e] + ChunkCodecLibLz4 v1.0.0 [eac87354] + ChunkCodecLibSnappy v1.0.0 [4c0bbee4] + ChunkCodecLibZlib v1.0.0 [55437552] + ChunkCodecLibZstd v1.0.0 [fb6a15b2] + CloseOpenIntervals v0.1.13 [38540f10] + CommonSolve v0.2.6 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [187b0558] + ConstructionBase v1.6.0 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [55939f99] + DecFP v1.4.1 [244e2a9f] + DefineSingletons v0.1.2 [2b5f629d] + DiffEqBase v6.199.0 [459566f4] + DiffEqCallbacks v4.12.0 [77a26b50] + DiffEqNoiseProcess v5.26.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.14 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [f151be2c] + EnzymeCore v0.8.18 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [5207ad80] + FNVHash v0.1.0 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [442a2c76] + FastGaussQuadrature v1.1.0 [a4df4552] + FastPower v1.3.0 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.16.0 [6a86dc24] + FiniteDiff v2.29.0 [f6369f11] + ForwardDiff v1.3.1 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [46192b85] + GPUArraysCore v0.2.0 [92fee26a] + GZip v0.6.2 [86223c79] + Graphs v1.13.3 [f67ccb44] + HDF5 v0.17.2 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [d25df0c9] + Inflate v0.1.5 [22cec73e] + InitialValues v0.3.1 [842dd82b] + InlineStrings v1.4.5 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [0f8b85d8] + JSON3 v1.14.3 [ae98c720] + Jieko v0.2.1 [ccbc3e58] + JumpProcesses v9.21.0 [ba0b0d4f] + Krylov v0.10.3 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 [5078a376] + LazyArrays v2.9.4 [2d8b4e74] + LevyArea v1.0.0 [a4a7f996] + LightBSON v1.3.1 [87fe0de2] + LineSearch v0.1.6 [7ed4a6bd] + LinearSolve v3.57.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [bb5d69b7] + MaybeInplace v0.1.4 [128add7d] + MicroCollections v0.2.0 [e1d29d7a] + Missings v1.2.0 [2e0e35c7] + Moshi v0.3.7 [46d2c3a1] + MuladdMacro v0.2.4 [77ba4419] + NaNMath v1.1.3 [8913a72c] + NonlinearSolve v4.14.0 [be0214bd] + NonlinearSolveBase v2.9.1 [5959db7a] + NonlinearSolveFirstOrder v1.11.0 [9a2c21bd] + NonlinearSolveQuasiNewton v1.12.0 [26075421] + NonlinearSolveSpectralMethods v1.6.0 [bac558e1] + OrderedCollections v1.8.1 ⌅ [bbf590c4] + OrdinaryDiffEqCore v2.3.0 ⌃ [4302a76b] + OrdinaryDiffEqDifferentiation v1.21.0 ⌃ [127b3ac7] + OrdinaryDiffEqNonlinearSolve v1.18.1 [90014a1f] + PDMats v0.11.37 [98572fba] + Parquet2 v0.2.33 [69de0a69] + Parsers v2.8.3 [e595aebf] + PathWeightSampling v0.2.0 [e409e4f3] + PoissonRandom v0.4.7 [f517fe37] + Polyester v0.7.18 [1d0040c9] + PolyesterWeave v0.2.2 [2dfb63ee] + PooledArrays v1.4.3 [d236fae5] + PreallocationTools v1.0.0 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [08abe8d2] + PrettyTables v3.1.2 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [74087812] + Random123 v1.7.1 [e6cf234a] + RandomNumbers v1.6.0 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.44.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [ae5879a3] + ResettableStacks v1.2.0 [79098fc4] + Rmath v0.9.0 [7e49a35a] + RuntimeGeneratedFunctions v0.5.16 [94e857df] + SIMDTypes v0.1.0 [0bca4576] + SciMLBase v2.134.0 [19f34311] + SciMLJacobianOperators v0.1.12 [a6db7da4] + SciMLLogging v1.8.0 [c0aeaf25] + SciMLOperators v1.14.1 [431bcebd] + SciMLPublic v1.0.1 [53ae85a6] + SciMLStructures v1.10.0 [91c51154] + SentinelArrays v1.4.9 [efcf1570] + Setfield v1.1.2 [727e6d20] + SimpleNonlinearSolve v2.10.0 [699a6c99] + SimpleTraits v0.9.5 [a2af1166] + SortingAlgorithms v1.2.2 [0a514795] + SparseMatrixColorings v0.4.23 [276daf66] + SpecialFunctions v2.6.1 [171d559e] + SplittablesBase v0.1.15 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [789caeaf] + StochasticDiffEq v6.90.0 [7792a7ef] + StrideArraysCore v0.5.8 [892a3eda] + StringManipulation v0.4.2 [856f2bd8] + StructTypes v1.11.0 [2efcf032] + SymbolicIndexingInterface v0.3.46 [ab02a1b2] + TableOperations v1.2.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [8290d209] + ThreadingUtilities v0.5.5 [9be31aac] + Thrift2 v0.2.1 [a759f4b9] + TimerOutputs v0.5.29 [28d57a85] + Transducers v0.4.85 [781d530d] + TruncatedStacktraces v1.4.0 [c4a57d5a] + UnsafeArrays v1.0.8 [ea10d353] + WeakRefStrings v1.4.2 [47200ebd] + DecFP_jll v2.0.300+0 ⌅ [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.2+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [5ced341a] + Lz4_jll v1.10.1+0 [856f044c] + MKL_jll v2025.2.0+0 [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.9+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [4611771a] + brotli_jll v1.2.0+0 [477f73a3] + libaec_jll v1.1.4+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [fe1e1685] + snappy_jll v1.2.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.18.0+0 [e37daf67] + LibGit2_jll v1.9.2+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.12.2 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 11.1s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 3138.3 ms ✓ DecFP 8882.6 ms ✓ BangBang → BangBangDataFramesExt 4188.8 ms ✓ SymbolicIndexingInterface → SymbolicIndexingInterfacePrettyTablesExt 31283.4 ms ✓ SciMLBase 9214.1 ms ✓ Transducers → TransducersDataFramesExt 4065.3 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 1727.0 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 6915.4 ms ✓ Distributions → DistributionsChainRulesCoreExt 4808.4 ms ✓ LightBSON 5430.3 ms ✓ SciMLBase → SciMLBaseChainRulesCoreExt 5164.3 ms ✓ SciMLBase → SciMLBaseForwardDiffExt 3919.9 ms ✓ SciMLBase → SciMLBaseDifferentiationInterfaceExt 7934.2 ms ✓ SciMLBase → SciMLBaseDistributionsExt 96107.5 ms ✓ Parquet2 20272.2 ms ✓ LinearSolve 9912.7 ms ✓ SciMLJacobianOperators 10440.8 ms ✓ LinearSolve → LinearSolveSparseArraysExt 8822.9 ms ✓ LinearSolve → LinearSolveForwardDiffExt 13155.5 ms ✓ LineSearch 19120.0 ms ✓ NonlinearSolveBase 6112.1 ms ✓ LinearSolve → LinearSolveEnzymeExt 5924.4 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseMatrixColoringsExt 5314.5 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseArraysExt 4307.9 ms ✓ NonlinearSolveBase → NonlinearSolveBaseChainRulesCoreExt 5808.1 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLinearSolveExt 5099.7 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLineSearchExt 5712.9 ms ✓ NonlinearSolveBase → NonlinearSolveBaseForwardDiffExt 11592.7 ms ✓ BracketingNonlinearSolve 31370.4 ms ✓ NonlinearSolveQuasiNewton 19106.4 ms ✓ NonlinearSolveSpectralMethods 52853.2 ms ✓ NonlinearSolveFirstOrder 5060.1 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveForwardDiffExt 10205.5 ms ✓ DiffEqBase 7414.7 ms ✓ NonlinearSolveQuasiNewton → NonlinearSolveQuasiNewtonForwardDiffExt 5345.3 ms ✓ NonlinearSolveSpectralMethods → NonlinearSolveSpectralMethodsForwardDiffExt 5082.6 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveChainRulesCoreExt 19887.8 ms ✓ SimpleNonlinearSolve 5081.5 ms ✓ DiffEqBase → DiffEqBaseSparseArraysExt 5525.0 ms ✓ DiffEqBase → DiffEqBaseChainRulesCoreExt 6793.2 ms ✓ DiffEqBase → DiffEqBaseForwardDiffExt 12888.4 ms ✓ DiffEqCallbacks 10922.4 ms ✓ OrdinaryDiffEqCore 5969.8 ms ✓ SimpleNonlinearSolve → SimpleNonlinearSolveChainRulesCoreExt 13745.8 ms ✓ DiffEqNoiseProcess 9975.0 ms ✓ JumpProcesses 5459.0 ms ✓ OrdinaryDiffEqCore → OrdinaryDiffEqCoreEnzymeCoreExt 39742.5 ms ✓ NonlinearSolve 13833.0 ms ✓ OrdinaryDiffEqDifferentiation 9352.2 ms ✓ OrdinaryDiffEqDifferentiation → OrdinaryDiffEqDifferentiationSparseArraysExt 16082.9 ms ✓ OrdinaryDiffEqNonlinearSolve 23624.9 ms ✓ StochasticDiffEq 56285.7 ms ✓ PathWeightSampling 52 dependencies successfully precompiled in 736 seconds. 282 already precompiled. Precompilation completed after 738.28s ################################################################################ # Testing # Testing PathWeightSampling Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_V5CVpo/Project.toml` [e595aebf] + PathWeightSampling v0.2.0 [37e2e46d] ↑ LinearAlgebra v1.12.0 ⇒ v1.13.0 Updating `/tmp/jl_V5CVpo/Manifest.toml` [dce04be8] + ArgCheck v2.5.0 [4c555306] + ArrayLayouts v1.12.2 [198e06fe] + BangBang v0.4.6 [9718e550] + Baselet v0.1.1 [c3b6d118] + BitIntegers v0.3.7 [0b6fb165] + ChunkCodecCore v1.0.1 [653b0ff7] + ChunkCodecLibBrotli v1.0.0 [7e9cc85e] + ChunkCodecLibLz4 v1.0.0 [eac87354] + ChunkCodecLibSnappy v1.0.0 [4c0bbee4] + ChunkCodecLibZlib v1.0.0 [55437552] + ChunkCodecLibZstd v1.0.0 [864edb3b] ↑ DataStructures v0.18.22 ⇒ v0.19.3 [55939f99] + DecFP v1.4.1 [244e2a9f] + DefineSingletons v0.1.2 [5207ad80] + FNVHash v0.1.0 [442a2c76] + FastGaussQuadrature v1.1.0 [48062228] + FilePathsBase v0.9.24 [92fee26a] + GZip v0.6.2 [86223c79] ↑ Graphs v1.13.1 ⇒ v1.13.3 [f67ccb44] + HDF5 v0.17.2 [22cec73e] + InitialValues v0.3.1 ⌅ [682c06a0] ↓ JSON v1.4.0 ⇒ v0.21.4 [0f8b85d8] + JSON3 v1.14.3 [5078a376] + LazyArrays v2.9.4 [a4a7f996] + LightBSON v1.3.1 [3da0fdf6] + MPIPreferences v0.1.11 [128add7d] + MicroCollections v0.2.0 [98572fba] + Parquet2 v0.2.33 [e595aebf] + PathWeightSampling v0.2.0 [d236fae5] ↑ PreallocationTools v0.4.34 ⇒ v1.0.0 [92933f4c] + ProgressMeter v1.11.0 [171d559e] + SplittablesBase v0.1.15 [856f2bd8] + StructTypes v1.11.0 [ec057cc2] - StructUtils v2.6.2 [ab02a1b2] + TableOperations v1.2.0 [9be31aac] + Thrift2 v0.2.1 [28d57a85] + Transducers v0.4.85 [c4a57d5a] + UnsafeArrays v1.0.8 [ea10d353] + WeakRefStrings v1.4.2 [47200ebd] + DecFP_jll v2.0.300+0 ⌅ [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.2+0 [5ced341a] + Lz4_jll v1.10.1+0 [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.9+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [4611771a] + brotli_jll v1.2.0+0 [477f73a3] + libaec_jll v1.1.4+0 [fe1e1685] + snappy_jll v1.2.3+0 [ac6e5ff7] ↑ JuliaSyntaxHighlighting v1.12.0 ⇒ v1.13.0 [b27032c2] ↑ LibCURL v0.6.4 ⇒ v1.0.0 [37e2e46d] ↑ LinearAlgebra v1.12.0 ⇒ v1.13.0 [44cfe95a] ↑ Pkg v1.12.1 ⇒ v1.14.0 [ea8e919c] ↑ SHA v0.7.0 ⇒ v1.0.0 [1a1011a3] - SharedArrays v1.11.0 [2f01184e] ↑ SparseArrays v1.12.0 ⇒ v1.13.0 [f489334b] ↑ StyledStrings v1.11.0 ⇒ v1.13.0 [deac9b47] ↑ LibCURL_jll v8.15.0+0 ⇒ v8.18.0+0 [e37daf67] ↑ LibGit2_jll v1.9.0+0 ⇒ v1.9.2+0 [14a3606d] ↑ MozillaCACerts_jll v2025.11.4 ⇒ v2025.12.2 [efcefdf7] ↑ PCRE2_jll v10.44.0+1 ⇒ v10.47.0+0 [bea87d4a] ↑ SuiteSparse_jll v7.8.3+2 ⇒ v7.10.1+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850ede] ↑ nghttp2_jll v1.64.0+1 ⇒ v1.68.0+1 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_V5CVpo/Project.toml` [7d9f7c33] Accessors v0.1.43 [a93c6f00] DataFrames v1.8.1 [31c24e10] Distributions v0.25.123 [e30172f5] Documenter v1.16.1 [e595aebf] PathWeightSampling v0.2.0 [90137ffa] StaticArrays v1.9.16 [10745b16] Statistics v1.11.1 [789caeaf] StochasticDiffEq v6.90.0 [8ba89e20] Distributed v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_V5CVpo/Manifest.toml` [47edcb42] ADTypes v1.21.0 [a4c015fc] ANSIColoredPrinters v0.0.1 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.43 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.22.0 [4c555306] ArrayLayouts v1.12.2 [198e06fe] BangBang v0.4.6 [9718e550] Baselet v0.1.1 [c3b6d118] BitIntegers v0.3.7 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] BracketingNonlinearSolve v1.6.2 [2a0fbf3d] CPUSummary v0.2.7 [d360d2e6] ChainRulesCore v1.26.0 [0b6fb165] ChunkCodecCore v1.0.1 [653b0ff7] ChunkCodecLibBrotli v1.0.0 [7e9cc85e] ChunkCodecLibLz4 v1.0.0 [eac87354] ChunkCodecLibSnappy v1.0.0 [4c0bbee4] ChunkCodecLibZlib v1.0.0 [55437552] ChunkCodecLibZstd v1.0.0 [fb6a15b2] CloseOpenIntervals v0.1.13 [944b1d66] CodecZlib v0.7.8 [38540f10] CommonSolve v0.2.6 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [187b0558] ConstructionBase v1.6.0 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [55939f99] DecFP v1.4.1 [244e2a9f] DefineSingletons v0.1.2 [2b5f629d] DiffEqBase v6.199.0 [459566f4] DiffEqCallbacks v4.12.0 [77a26b50] DiffEqNoiseProcess v5.26.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] 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Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... ┌ Warning: The call to compilecache failed to create a usable precompiled cache file for PathWeightSampling [e595aebf-dd45-48e4-a6c3-f40ecff26dc3] │ exception = Required dependency Base.PkgId(Base.UUID("c3b6d118-76ef-56ca-8cc7-ebb389d030a1"), "BitIntegers") failed to load from a cache file. └ @ Base loading.jl:2949 ┌ Warning: The call to compilecache failed to create a usable precompiled cache file for Parquet2 [98572fba-bba0-415d-956f-fa77e587d26d] │ exception = Required dependency Base.PkgId(Base.UUID("c3b6d118-76ef-56ca-8cc7-ebb389d030a1"), "BitIntegers") failed to load from a cache file. └ @ Base loading.jl:2949 ┌ Warning: Unable to determine HTML(edit_link = ...) from remote HEAD branch, defaulting to "master". │ Calling `git remote` failed with an exception. Set JULIA_DEBUG=Documenter to see the error. │ Unless this is due to a configuration error, the relevant variable should be set explicitly. └ @ Documenter ~/.julia/packages/Documenter/xvqbW/src/utilities/utilities.jl:680 [ Info: SetupBuildDirectory: setting up build directory. [ Info: Doctest: running doctests. [ Info: Skipped ExpandTemplates step (doctest only). [ Info: Skipped CrossReferences step (doctest only). [ Info: Skipped CheckDocument step (doctest only). [ Info: Skipped Populate step (doctest only). [ Info: Skipped RenderDocument step (doctest only). Test Summary: | Pass Total Time Doctests: PathWeightSampling | 1 1 43.2s Trajectory Generation: Error During Test at /home/pkgeval/.julia/packages/PathWeightSampling/E3rzs/test/runtests.jl:28 Got exception outside of a @test LoadError: FieldError: type String has no field `args`; String has no fields at all. Stacktrace: [1] getproperty(x::String, f::Symbol) @ Base ./Base_compiler.jl:57 [2] (::Test.var"#@test##2#@test##3")(kw::Any) @ Test ./none:-1 [3] iterate(::Base.Iterators.Filter{Test.var"#@test##2#@test##3", Tuple{String}}) @ Base.Iterators ./iterators.jl:539 [4] iterate @ ./generator.jl:45 [inlined] [5] grow_to!(dest::Vector{Union{}}, itr::Base.Generator{Base.Iterators.Filter{Test.var"#@test##2#@test##3", Tuple{String}}, Test.var"#@test##0#@test##1"}) @ Base ./array.jl:901 [6] collect(itr::Base.Generator{Base.Iterators.Filter{Test.var"#@test##2#@test##3", Tuple{String}}, Test.var"#@test##0#@test##1"}) @ Base ./array.jl:825 [7] var"@test"(__source__::LineNumberNode, __module__::Module, ex::Any, kws::Vararg{Any}) @ Test /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:534 [8] fl_lower(ex::Expr, mod::Module, filename::String, lineno::UInt64, world::UInt64, warn::Bool) @ Base ./flfrontend.jl:24 [9] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [10] top-level scope @ ~/.julia/packages/PathWeightSampling/E3rzs/test/runtests.jl:27 [11] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [12] macro expansion @ ~/.julia/packages/PathWeightSampling/E3rzs/test/runtests.jl:28 [inlined] [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [14] macro expansion @ ~/.julia/packages/PathWeightSampling/E3rzs/test/runtests.jl:29 [inlined] [15] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [16] macro expansion @ ~/.julia/packages/PathWeightSampling/E3rzs/test/runtests.jl:29 [inlined] [17] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [18] top-level scope @ none:6 [19] eval(m::Module, e::Any) @ Core ./boot.jl:489 [20] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [21] _start() @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/PathWeightSampling/E3rzs/test/unit/trajectory_generation.jl:39 in expression starting at /home/pkgeval/.julia/packages/PathWeightSampling/E3rzs/test/unit/trajectory_generation.jl:14 Probability Computation: Error During Test at /home/pkgeval/.julia/packages/PathWeightSampling/E3rzs/test/runtests.jl:31 Got exception outside of a @test LoadError: FieldError: type String has no field `args`; String has no fields at all. Stacktrace: [1] getproperty(x::String, f::Symbol) @ Base ./Base_compiler.jl:57 [2] (::Test.var"#@test##2#@test##3")(kw::Any) @ Test ./none:-1 [3] iterate(::Base.Iterators.Filter{Test.var"#@test##2#@test##3", Tuple{String}}) @ Base.Iterators ./iterators.jl:539 [4] iterate @ ./generator.jl:45 [inlined] [5] grow_to!(dest::Vector{Union{}}, itr::Base.Generator{Base.Iterators.Filter{Test.var"#@test##2#@test##3", Tuple{String}}, Test.var"#@test##0#@test##1"}) @ Base ./array.jl:901 [6] collect(itr::Base.Generator{Base.Iterators.Filter{Test.var"#@test##2#@test##3", Tuple{String}}, Test.var"#@test##0#@test##1"}) @ Base ./array.jl:825 [7] var"@test"(__source__::LineNumberNode, __module__::Module, ex::Any, kws::Vararg{Any}) @ Test /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:534 [8] fl_lower(ex::Expr, mod::Module, filename::String, lineno::UInt64, world::UInt64, warn::Bool) @ Base ./flfrontend.jl:24 [9] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [10] top-level scope @ ~/.julia/packages/PathWeightSampling/E3rzs/test/runtests.jl:27 [11] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [12] macro expansion @ ~/.julia/packages/PathWeightSampling/E3rzs/test/runtests.jl:28 [inlined] [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [14] macro expansion @ ~/.julia/packages/PathWeightSampling/E3rzs/test/runtests.jl:32 [inlined] [15] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [16] macro expansion @ ~/.julia/packages/PathWeightSampling/E3rzs/test/runtests.jl:32 [inlined] [17] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [18] top-level scope @ none:6 [19] eval(m::Module, e::Any) @ Core ./boot.jl:489 [20] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [21] _start() @ Base ./client.jl:585 in expression starting at 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WARNING: Method definition (::Type{Main.ThreeSpeciesRates})(Any, Any, Any, Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/PathWeightSampling/E3rzs/test/fixtures.jl:100 overwritten at /home/pkgeval/.julia/packages/PathWeightSampling/E3rzs/test/integration/three_species_cascade.jl:69. WARNING: Method definition ThreeSpeciesRates(Any, AbstractArray{T, 1} where T) in module Main at /home/pkgeval/.julia/packages/PathWeightSampling/E3rzs/test/fixtures.jl:108 overwritten at /home/pkgeval/.julia/packages/PathWeightSampling/E3rzs/test/integration/three_species_cascade.jl:77. 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SMC-256: 3.230874 seconds (88.71 k allocations: 6.586 MiB, 3.78% compilation time) Generate Sample 2/24 with SMC-256: 3.049184 seconds (64.56 k allocations: 5.290 MiB) Generate Sample 3/24 with SMC-256: 3.273391 seconds (64.52 k allocations: 5.290 MiB) Generate Sample 4/24 with SMC-256: 2.978919 seconds (64.42 k allocations: 5.284 MiB) Generate Sample 5/24 with SMC-256: 2.986627 seconds (64.49 k allocations: 5.287 MiB) Generate Sample 6/24 with SMC-256: 3.005961 seconds (64.41 k allocations: 5.286 MiB) Generate Sample 7/24 with SMC-256: 3.047087 seconds (64.53 k allocations: 5.289 MiB) Generate Sample 8/24 with SMC-256: 3.093930 seconds (64.35 k allocations: 5.282 MiB) Generate Sample 9/24 with SMC-256: 2.992147 seconds (64.71 k allocations: 5.299 MiB) Generate Sample 10/24 with SMC-256: 3.052774 seconds (64.40 k allocations: 5.283 MiB) Generate Sample 11/24 with SMC-256: 3.107854 seconds (64.61 k allocations: 5.294 MiB) Generate Sample 12/24 with SMC-256: 3.112973 seconds (64.44 k allocations: 5.287 MiB) Generate Sample 13/24 with SMC-256: 3.168594 seconds (64.66 k allocations: 5.295 MiB) Generate Sample 14/24 with SMC-256: 2.530181 seconds (64.42 k allocations: 5.285 MiB) Generate Sample 15/24 with SMC-256: 2.939218 seconds (64.39 k allocations: 5.284 MiB) Generate Sample 16/24 with SMC-256: 2.611324 seconds (64.41 k allocations: 5.284 MiB) Generate Sample 17/24 with SMC-256: 2.999915 seconds (64.21 k allocations: 5.276 MiB) Generate Sample 18/24 with SMC-256: 3.162955 seconds (64.50 k allocations: 5.288 MiB) Generate Sample 19/24 with SMC-256: 2.996515 seconds (64.41 k allocations: 5.283 MiB) Generate Sample 20/24 with SMC-256: 3.133450 seconds (64.55 k allocations: 5.291 MiB) Generate Sample 21/24 with SMC-256: 2.716787 seconds (64.46 k allocations: 5.288 MiB) Generate Sample 22/24 with SMC-256: 3.018932 seconds (64.56 k allocations: 5.290 MiB) Generate Sample 23/24 with SMC-256: 3.022777 seconds (64.63 k allocations: 5.295 MiB) Generate Sample 24/24 with SMC-256: 2.581998 seconds (64.55 k allocations: 5.291 MiB) Generate Sample 1/24 with DirectMC-256: 3.007254 seconds (99.18 k allocations: 7.104 MiB, 3.64% compilation time) Generate Sample 2/24 with DirectMC-256: 2.645444 seconds (60.36 k allocations: 5.073 MiB) Generate Sample 3/24 with DirectMC-256: 2.840053 seconds (60.36 k allocations: 5.073 MiB) Generate Sample 4/24 with DirectMC-256: 3.035276 seconds (60.36 k allocations: 5.073 MiB) Generate Sample 5/24 with DirectMC-256: 2.954959 seconds (60.36 k allocations: 5.073 MiB) Generate Sample 6/24 with DirectMC-256: 3.066384 seconds (60.36 k allocations: 5.073 MiB) Generate Sample 7/24 with DirectMC-256: 3.059461 seconds (60.36 k allocations: 5.073 MiB) Generate Sample 8/24 with DirectMC-256: 2.973598 seconds (60.36 k allocations: 5.073 MiB) Generate Sample 9/24 with DirectMC-256: 3.047432 seconds (60.36 k allocations: 5.073 MiB) Generate Sample 10/24 with DirectMC-256: 3.128456 seconds (60.36 k allocations: 5.073 MiB) Generate Sample 11/24 with DirectMC-256: 3.127060 seconds (60.36 k allocations: 5.073 MiB) Generate Sample 12/24 with DirectMC-256: 3.078154 seconds (60.36 k allocations: 5.073 MiB) Generate Sample 13/24 with DirectMC-256: 3.003691 seconds (60.36 k allocations: 5.073 MiB) Generate Sample 14/24 with DirectMC-256: 3.071419 seconds (60.36 k allocations: 5.073 MiB) Generate Sample 15/24 with DirectMC-256: 3.054276 seconds (60.36 k allocations: 5.073 MiB) Generate Sample 16/24 with DirectMC-256: 3.104440 seconds (60.36 k allocations: 5.073 MiB) Generate Sample 17/24 with DirectMC-256: 3.224452 seconds (60.36 k allocations: 5.073 MiB) Generate Sample 18/24 with DirectMC-256: 3.115767 seconds (60.36 k allocations: 5.073 MiB) Generate Sample 19/24 with DirectMC-256: 3.001607 seconds (60.36 k allocations: 5.073 MiB) Generate Sample 20/24 with DirectMC-256: 2.998471 seconds (60.36 k allocations: 5.073 MiB) Generate Sample 21/24 with DirectMC-256: 3.164160 seconds (60.36 k allocations: 5.073 MiB) Generate Sample 22/24 with DirectMC-256: 3.040128 seconds (60.36 k allocations: 5.073 MiB) Generate Sample 23/24 with DirectMC-256: 3.025364 seconds (60.36 k allocations: 5.073 MiB) Generate Sample 24/24 with DirectMC-256: 3.040323 seconds (60.36 k allocations: 5.073 MiB) Generate Sample 1/24 with PERM: 2.050528 seconds (124.65 k allocations: 8.927 MiB, 4.84% compilation time) Generate Sample 2/24 with PERM: 2.006803 seconds (99.60 k allocations: 7.560 MiB) Generate Sample 3/24 with PERM: 1.981117 seconds (95.76 k allocations: 7.366 MiB) Generate Sample 4/24 with PERM: 1.932484 seconds (99.78 k allocations: 7.529 MiB) Generate Sample 5/24 with PERM: 2.087599 seconds (98.47 k allocations: 7.474 MiB) Generate Sample 6/24 with PERM: 2.005431 seconds (93.05 k allocations: 7.150 MiB) Generate Sample 7/24 with PERM: 1.743570 seconds (97.14 k allocations: 7.396 MiB) Generate Sample 8/24 with PERM: 2.006566 seconds (97.70 k allocations: 7.430 MiB) Generate Sample 9/24 with PERM: 1.958466 seconds (96.25 k allocations: 7.337 MiB) Generate Sample 10/24 with PERM: 1.971307 seconds (93.07 k allocations: 7.210 MiB) Generate Sample 11/24 with PERM: 2.024466 seconds (113.47 k allocations: 8.282 MiB) Generate Sample 12/24 with PERM: 1.936959 seconds (100.64 k allocations: 7.548 MiB) Generate Sample 13/24 with PERM: 1.911580 seconds (93.58 k allocations: 7.224 MiB) Generate Sample 14/24 with PERM: 1.977221 seconds (97.35 k allocations: 7.475 MiB) Generate Sample 15/24 with PERM: 1.971287 seconds (101.11 k allocations: 7.601 MiB) Generate Sample 16/24 with PERM: 1.943519 seconds (101.41 k allocations: 7.675 MiB) Generate Sample 17/24 with PERM: 1.975412 seconds (100.47 k allocations: 7.634 MiB) Generate Sample 18/24 with PERM: 2.306394 seconds (100.87 k allocations: 7.606 MiB) Generate Sample 19/24 with PERM: 1.989091 seconds (104.51 k allocations: 7.879 MiB) Generate Sample 20/24 with PERM: 1.898255 seconds (98.05 k allocations: 7.460 MiB) Generate Sample 21/24 with PERM: 2.099377 seconds (99.05 k allocations: 7.542 MiB) Generate Sample 22/24 with PERM: 1.700366 seconds (101.15 k allocations: 7.618 MiB) Generate Sample 23/24 with PERM: 1.531392 seconds (102.51 k allocations: 7.695 MiB) Generate Sample 24/24 with PERM: 1.958942 seconds (99.89 k allocations: 7.533 MiB) PERM Algorithm: Error During Test at /home/pkgeval/.julia/packages/PathWeightSampling/E3rzs/test/runtests.jl:67 Got exception outside of a @test LoadError: MethodError: no method matching PathWeightSampling.SSA.ReactionSet(::Vector{Float64}, ::Vector{Vector{Pair{Int64, Int64}}}, ::Vector{Vector{Pair{Int64, Int64}}}, ::Int64) The type `PathWeightSampling.SSA.ReactionSet` exists, but no method is defined for this combination of argument types when trying to construct it. Closest candidates are: PathWeightSampling.SSA.ReactionSet(::Rates, ::RStoich, ::NStoich, !Matched::Vector{Symbol}) where {Rates<:(AbstractVector), RStoich<:AbstractVector{Vector{Pair{Int64, Int64}}}, NStoich<:AbstractVector{Vector{Pair{Int64, Int64}}}} @ PathWeightSampling ~/.julia/packages/PathWeightSampling/E3rzs/src/trajectories/ssa.jl:59 Stacktrace: [1] top-level scope @ ~/.julia/packages/PathWeightSampling/E3rzs/test/algorithms/perm_algorithm.jl:15 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [3] top-level scope @ ~/.julia/packages/PathWeightSampling/E3rzs/test/runtests.jl:27 [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [5] macro expansion @ ~/.julia/packages/PathWeightSampling/E3rzs/test/runtests.jl:64 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [7] macro expansion @ ~/.julia/packages/PathWeightSampling/E3rzs/test/runtests.jl:68 [inlined] [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2243 [inlined] [9] macro expansion @ ~/.julia/packages/PathWeightSampling/E3rzs/test/runtests.jl:68 [inlined] [10] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [11] top-level scope @ none:6 [12] eval(m::Module, e::Any) @ Core ./boot.jl:489 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [14] _start() @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/PathWeightSampling/E3rzs/test/algorithms/perm_algorithm.jl:15 Test Summary: | Pass Error Total Time PathWeightSampling.jl | 1600 3 1603 10m48.1s Unit Tests | 338 2 340 1m25.1s Trajectory Generation | 1 1 5.2s Probability Computation | 1 1 0.0s Stochastic Simulation Algorithm | 338 338 1m19.8s Integration Tests | 1252 1252 6m05.6s Algorithm Tests | 10 1 11 3m17.4s SMC Estimation | 10 10 3m14.9s PERM Algorithm | 1 1 2.5s RNG of the outermost testset: Xoshiro(0x42fb632af13b4e6e, 0x4134543589419793, 0x951a3a8e46c8b716, 0x0def7cfd0f624ebe, 0x51a7ef7e5a9bcfc7) ERROR: LoadError: Some tests did not pass: 1600 passed, 0 failed, 3 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/PathWeightSampling/E3rzs/test/runtests.jl:22 Testing failed after 1075.61s ERROR: LoadError: Package PathWeightSampling errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3122 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2987 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:237 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:585 in expression starting at /PkgEval.jl/scripts/evaluate.jl:228 PkgEval failed after 1883.29s: package tests unexpectedly errored