Package evaluation to test BioFindr on Julia 1.14.0-DEV.1584 (ac5fadde9b*) started at 2026-01-19T00:06:29.771 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 10.02s ################################################################################ # Installation # Installing BioFindr... Resolving package versions... Installed ChunkCodecLibZstd ─────────── v1.0.0 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed MacroTools ────────────────── v0.5.16 Installed URIs ──────────────────────── v1.6.1 Installed OpenSSH_jll ───────────────── v10.2.1+0 Installed FillArrays ────────────────── v1.16.0 Installed DataStructures ────────────── v0.19.3 Installed JLD2 ──────────────────────── v0.6.3 Installed AbstractTrees ─────────────── v0.4.5 Installed Adapt ─────────────────────── v4.4.0 Installed InlineStrings ─────────────── v1.4.5 Installed KernelDensity ─────────────── v0.6.10 Installed MKL_jll ───────────────────── v2025.2.0+0 Installed HypergeometricFunctions ───── v0.3.28 Installed MetaGraphsNext ────────────── v0.7.5 Installed ArnoldiMethod ─────────────── v0.4.0 Installed oneTBB_jll ────────────────── v2022.0.0+1 Installed ConcurrentUtilities ───────── v2.5.0 Installed CodecZlib ─────────────────── v0.7.8 Installed AliasTables ───────────────── v1.1.3 Installed ScientificTypes ───────────── v3.1.2 Installed TranscodingStreams ────────── v0.11.3 Installed StatsBase ─────────────────── v0.34.10 Installed LiveServer ────────────────── v1.5.0 Installed ExceptionUnwrapping ───────── v0.1.11 Installed HashArrayMappedTries ──────── v0.2.0 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed Compat ────────────────────── v4.18.1 Installed OrderedCollections ────────── v1.8.1 Installed DataAPI ───────────────────── v1.16.0 Installed Statistics ────────────────── v1.11.1 Installed InvertedIndices ───────────── v1.3.1 Installed IntelOpenMP_jll ───────────── v2025.2.0+0 Installed StatsAPI ──────────────────── v1.8.0 Installed Git_LFS_jll ───────────────── v3.7.0+0 Installed DataValueInterfaces ───────── v1.0.0 Installed MIMEs ─────────────────────── v0.1.4 Installed PrecompileTools ───────────── v1.3.3 Installed MbedTLS ───────────────────── v1.1.9 Installed SentinelArrays ────────────── v1.4.9 Installed FileIO ────────────────────── v1.17.1 Installed MarkdownAST ───────────────── v0.1.2 Installed OffsetArrays ──────────────── v1.17.0 Installed OpenSSL ───────────────────── v1.6.1 Installed StaticArrays ──────────────── v1.9.16 Installed StaticArraysCore ──────────── v1.4.4 Installed LoggingExtras ─────────────── v1.2.0 Installed Documenter ────────────────── v1.16.1 Installed StructUtils ───────────────── v2.6.2 Installed Expat_jll ─────────────────── v2.7.3+0 Installed IrrationalConstants ───────── v0.2.6 Installed AbstractFFTs ──────────────── v1.5.0 Installed ChainRulesCore ────────────── v1.26.0 Installed QuadGK ────────────────────── v2.11.2 Installed LazilyInitializedFields ───── v1.3.0 Installed AxisAlgorithms ────────────── v1.1.0 Installed Ratios ────────────────────── v0.4.5 Installed ColorTypes ────────────────── v0.12.1 Installed StringManipulation ────────── v0.4.2 Installed SimpleTraits ──────────────── v0.9.5 Installed Requires ──────────────────── v1.3.1 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed HTTP ──────────────────────── v1.10.19 Installed LogExpFunctions ───────────── v0.3.29 Installed ChunkCodecLibZlib ─────────── v1.0.0 Installed BitFlags ──────────────────── v0.1.9 Installed Git_jll ───────────────────── v2.52.0+0 Installed Interpolations ────────────── v0.16.2 Installed JSON ──────────────────────── v1.4.0 Installed Parsers ───────────────────── v2.8.3 Installed Rmath ─────────────────────── v0.9.0 Installed ScopedValues ──────────────── v1.5.0 Installed StatsFuns ─────────────────── v1.5.2 Installed Distributions ─────────────── v0.25.123 Installed PrettyTables ──────────────── v3.1.2 Installed PtrArrays ─────────────────── v1.3.0 Installed WoodburyMatrices ──────────── v1.1.0 Installed Reexport ──────────────────── v1.2.2 Installed Tables ────────────────────── v1.12.1 Installed IOCapture ─────────────────── v1.0.0 Installed SpecialFunctions ──────────── v2.6.1 Installed Git ───────────────────────── v1.5.0 Installed SimpleBufferStream ────────── v1.2.0 Installed FixedPointNumbers ─────────── v0.8.5 Installed ScientificTypesBase ───────── v3.0.0 Installed Missings ──────────────────── v1.2.0 Installed Preferences ───────────────── v1.5.1 Installed FFTW ──────────────────────── v1.10.0 Installed FFTW_jll ──────────────────── v3.3.11+0 Installed RegistryInstances ─────────── v0.1.0 Installed PooledArrays ──────────────── v1.4.3 Installed JLLWrappers ───────────────── v1.7.1 Installed TableTraits ───────────────── v1.0.1 Installed DataFrames ────────────────── v1.8.1 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed BioFindr ──────────────────── v1.0.5 Installed MbedTLS_jll ───────────────── v2.28.1010+0 Installed ChunkCodecCore ────────────── v1.0.1 Installed LaTeXStrings ──────────────── v1.4.0 Installed Crayons ───────────────────── v4.1.1 Installed SortingAlgorithms ─────────── v1.2.2 Installed PDMats ────────────────────── v0.11.37 Installed CategoricalArrays ─────────── v1.0.2 Installed StatisticalTraits ─────────── v3.5.0 Installed Inflate ───────────────────── v0.1.5 Installed DocStringExtensions ───────── v0.9.5 Installed ANSIColoredPrinters ───────── v0.0.1 Installed Graphs ────────────────────── v1.13.3 Installing 9 artifacts Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact Expat 283.3 KiB Installed artifact FFTW 2.2 MiB Installed artifact OpenSSH 4.3 MiB Installed artifact Libiconv 1.9 MiB Installed artifact MbedTLS 2.2 MiB Installed artifact Git_LFS 9.6 MiB Installed artifact Git 49.3 MiB Updating `~/.julia/environments/v1.14/Project.toml` [77580646] + BioFindr v1.0.5 Updating `~/.julia/environments/v1.14/Manifest.toml` [a4c015fc] + ANSIColoredPrinters v0.0.1 [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [13072b0f] + AxisAlgorithms v1.1.0 [77580646] + BioFindr v1.0.5 [d1d4a3ce] + BitFlags v0.1.9 [324d7699] + CategoricalArrays v1.0.2 [d360d2e6] + ChainRulesCore v1.26.0 [0b6fb165] + ChunkCodecCore v1.0.1 [4c0bbee4] + ChunkCodecLibZlib v1.0.0 [55437552] + ChunkCodecLibZstd v1.0.0 [944b1d66] + CodecZlib v0.7.8 [3da002f7] + ColorTypes v0.12.1 [34da2185] + Compat v4.18.1 [f0e56b4a] + ConcurrentUtilities v2.5.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [e30172f5] + Documenter v1.16.1 [460bff9d] + ExceptionUnwrapping v0.1.11 [7a1cc6ca] + FFTW v1.10.0 [5789e2e9] + FileIO v1.17.1 [1a297f60] + FillArrays v1.16.0 [53c48c17] + FixedPointNumbers v0.8.5 [d7ba0133] + Git v1.5.0 [86223c79] + Graphs v1.13.3 [cd3eb016] + HTTP v1.10.19 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [b5f81e59] + IOCapture v1.0.0 [d25df0c9] + Inflate v0.1.5 [842dd82b] + InlineStrings v1.4.5 [a98d9a8b] + Interpolations v0.16.2 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [033835bb] + JLD2 v0.6.3 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v1.4.0 [5ab0869b] + KernelDensity v0.6.10 [b964fa9f] + LaTeXStrings v1.4.0 [0e77f7df] + LazilyInitializedFields v1.3.0 [16fef848] + LiveServer v1.5.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 ⌅ [6c6e2e6c] + MIMEs v0.1.4 [1914dd2f] + MacroTools v0.5.16 [d0879d2d] + MarkdownAST v0.1.2 [739be429] + MbedTLS v1.1.9 [fa8bd995] + MetaGraphsNext v0.7.5 [e1d29d7a] + Missings v1.2.0 [6fe1bfb0] + OffsetArrays v1.17.0 [4d8831e6] + OpenSSL v1.6.1 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 [69de0a69] + Parsers v2.8.3 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [08abe8d2] + PrettyTables v3.1.2 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [c84ed2f1] + Ratios v0.4.5 [189a3867] + Reexport v1.2.2 [2792f1a3] + RegistryInstances v0.1.0 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [321657f4] + ScientificTypes v3.1.2 [30f210dd] + ScientificTypesBase v3.0.0 [7e506255] + ScopedValues v1.5.0 [91c51154] + SentinelArrays v1.4.9 [777ac1f9] + SimpleBufferStream v1.2.0 [699a6c99] + SimpleTraits v0.9.5 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [64bff920] + StatisticalTraits v3.5.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [892a3eda] + StringManipulation v0.4.2 [ec057cc2] + StructUtils v2.6.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.6.1 [efce3f68] + WoodburyMatrices v1.1.0 [2e619515] + Expat_jll v2.7.3+0 [f5851436] + FFTW_jll v3.3.11+0 [020c3dae] + Git_LFS_jll v3.7.0+0 [f8c6e375] + Git_jll v2.52.0+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] + MKL_jll v2025.2.0+0 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [9bd350c2] + OpenSSH_jll v10.2.1+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.18.0+0 [e37daf67] + LibGit2_jll v1.9.2+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.12.2 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 15.1s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4794.6 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. Precompiling package dependencies... Precompiling packages... 4689.2 ms ✓ MacroTools 1672.2 ms ✓ InlineStrings 826.6 ms ✓ Reexport 2164.6 ms ✓ IrrationalConstants 817.9 ms ✓ DataValueInterfaces 934.7 ms ✓ StatsAPI 899.8 ms ✓ LazilyInitializedFields 1222.1 ms ✓ Inflate 1322.7 ms ✓ TranscodingStreams 928.4 ms ✓ LaTeXStrings 1124.9 ms ✓ ChunkCodecCore 1154.9 ms ✓ Statistics 993.7 ms ✓ StaticArraysCore 880.8 ms ✓ PtrArrays 876.8 ms ✓ SimpleBufferStream 1020.2 ms ✓ ANSIColoredPrinters 1080.4 ms ✓ DataAPI 1306.1 ms ✓ URIs 1055.1 ms ✓ InvertedIndices 1579.0 ms ✓ BitFlags 1626.5 ms ✓ AbstractTrees 1407.6 ms ✓ AbstractFFTs 2199.2 ms ✓ FillArrays 980.3 ms ✓ ScientificTypesBase 2909.0 ms ✓ MIMEs 1349.3 ms ✓ OrderedCollections 974.6 ms ✓ HashArrayMappedTries 1200.9 ms ✓ DocStringExtensions 1861.5 ms ✓ OffsetArrays 1227.7 ms ✓ IteratorInterfaceExtensions 2077.5 ms ✓ Crayons 895.5 ms ✓ IOCapture 1245.2 ms ✓ Requires 1933.6 ms ✓ ConcurrentUtilities 1984.9 ms ✓ PDMats 1360.3 ms ✓ WoodburyMatrices 1968.8 ms ✓ SentinelArrays 1060.9 ms ✓ LoggingExtras 1438.6 ms ✓ StructUtils 1378.7 ms ✓ Compat 1310.6 ms ✓ Preferences 1638.9 ms ✓ ExceptionUnwrapping 3319.5 ms ✓ SimpleTraits 5581.7 ms ✓ RegistryInstances 1002.3 ms ✓ CodecZlib 1023.2 ms ✓ ChunkCodecLibZlib 1239.7 ms ✓ ChunkCodecLibZstd 1913.8 ms ✓ Statistics → SparseArraysExt 3954.5 ms ✓ FixedPointNumbers 1040.7 ms ✓ AliasTables 1076.1 ms ✓ Missings 1309.7 ms ✓ PooledArrays 4084.2 ms ✓ OpenSSL 1810.9 ms ✓ MarkdownAST 4366.2 ms ✓ AbstractFFTs → AbstractFFTsTestExt 1653.6 ms ✓ FillArrays → FillArraysSparseArraysExt 1108.6 ms ✓ FillArrays → FillArraysStatisticsExt 940.7 ms ✓ StatisticalTraits 3979.4 ms ✓ DataStructures 1306.5 ms ✓ ScopedValues 1375.5 ms ✓ LogExpFunctions 793.5 ms ✓ TableTraits 850.6 ms ✓ Ratios 957.4 ms ✓ Adapt 9791.6 ms ✓ FileIO 1501.0 ms ✓ FillArrays → FillArraysPDMatsExt 1410.7 ms ✓ AxisAlgorithms 872.0 ms ✓ Compat → CompatLinearAlgebraExt 960.3 ms ✓ PrecompileTools 1223.3 ms ✓ JLLWrappers 2866.3 ms ✓ ColorTypes 1103.5 ms ✓ SortingAlgorithms 2320.3 ms ✓ QuadGK 1809.2 ms ✓ Tables 934.1 ms ✓ Ratios → RatiosFixedPointNumbersExt 1301.3 ms ✓ Adapt → AdaptSparseArraysExt 831.9 ms ✓ OffsetArrays → OffsetArraysAdaptExt 2743.8 ms ✓ ChainRulesCore 3128.4 ms ✓ CategoricalArrays 3361.3 ms ✓ StringManipulation 13895.1 ms ✓ StaticArrays 16720.0 ms ✓ Parsers 47509.9 ms ✓ JLD2 1404.9 ms ✓ Rmath_jll 1416.1 ms ✓ OpenSpecFun_jll 4998.5 ms ✓ IntelOpenMP_jll 4976.0 ms ✓ oneTBB_jll 1552.1 ms ✓ Git_LFS_jll 1457.9 ms ✓ FFTW_jll 1420.9 ms ✓ OpenSSH_jll 1340.5 ms ✓ Libiconv_jll 1271.0 ms ✓ MbedTLS_jll 1287.0 ms ✓ Expat_jll 1067.1 ms ✓ ColorTypes → StyledStringsExt 4133.5 ms ✓ StatsBase 859.7 ms ✓ StructUtils → StructUtilsTablesExt 1363.6 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 1025.4 ms ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 3615.1 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 1114.8 ms ✓ CategoricalArrays → CategoricalArraysSentinelArraysExt 38530.2 ms ✓ PrettyTables 3772.4 ms ✓ ArnoldiMethod 1490.6 ms ✓ StaticArrays → StaticArraysStatisticsExt 1532.8 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1597.3 ms ✓ FillArrays → FillArraysStaticArraysExt 1590.4 ms ✓ Adapt → AdaptStaticArraysExt 6697.0 ms ✓ JSON 1106.7 ms ✓ InlineStrings → ParsersExt 1722.4 ms ✓ Rmath 4695.6 ms ✓ SpecialFunctions  Downloading artifact: IntelOpenMP  Downloading artifact: oneTBB 10298.3 ms ✓ MKL_jll 2249.3 ms ✓ MbedTLS 1427.3 ms ✓ Git_jll 1589.3 ms ✓ PDMats → StatsBaseExt 1532.8 ms ✓ CategoricalArrays → CategoricalArraysStatsBaseExt 85754.4 ms ✓ DataFrames 10289.1 ms ✓ Graphs 4345.6 ms ✓ Interpolations 1226.6 ms ✓ CategoricalArrays → CategoricalArraysJSONExt 4348.7 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 2212.5 ms ✓ HypergeometricFunctions 7198.8 ms ✓ FFTW 26728.1 ms ✓ HTTP 1012.0 ms ✓ Git 9581.4 ms ✓ MetaGraphsNext 3291.9 ms ✓ Graphs → GraphsSharedArraysExt 3000.5 ms ✓ StatsFuns 4585.7 ms ✓ LiveServer 6744.6 ms ✓ FileIO → HTTPExt 51447.6 ms ✓ Documenter 3676.1 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 9098.8 ms ✓ Distributions 3578.6 ms ✓ Distributions → DistributionsTestExt 3018.2 ms ✓ Distributions → DistributionsChainRulesCoreExt 6315.2 ms ✓ ScientificTypes 3902.0 ms ✓ KernelDensity 21979.2 ms ✓ BioFindr 137 dependencies successfully precompiled in 607 seconds. 41 already precompiled. 1 dependency had output during precompilation: ┌ MKL_jll │ Downloading artifact: IntelOpenMP │ Downloading artifact: oneTBB └ Precompilation completed after 616.47s ################################################################################ # Testing # Testing BioFindr Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_XxTFGF/Project.toml` [77580646] + BioFindr v1.0.5 [a93c6f00] ↑ DataFrames v1.6.1 ⇒ v1.8.1 [31c24e10] ↑ Distributions v0.25.107 ⇒ v0.25.123 [5ab0869b] ↑ KernelDensity v0.6.8 ⇒ v0.6.10 [321657f4] ↑ ScientificTypes v3.0.2 ⇒ v3.1.2 [276daf66] ↑ SpecialFunctions v2.3.1 ⇒ v2.6.1 [10745b16] ↑ Statistics v1.10.0 ⇒ v1.11.1 [2913bbd2] ↑ StatsBase v0.34.2 ⇒ v0.34.10 [de0858da] ~ Printf ⇒ v1.11.0 [9a3f8284] ~ Random ⇒ v1.11.0 [8dfed614] ~ Test ⇒ v1.11.0 Updating `/tmp/jl_XxTFGF/Manifest.toml` [a4c015fc] + ANSIColoredPrinters v0.0.1 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] ↑ Adapt v4.0.1 ⇒ v4.4.0 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [77580646] + BioFindr v1.0.5 [d1d4a3ce] + BitFlags v0.1.9 [49dc2e85] - Calculus v0.5.1 [324d7699] ↑ CategoricalArrays v0.10.8 ⇒ v1.0.2 [d360d2e6] ↑ ChainRulesCore v1.20.1 ⇒ v1.26.0 [0b6fb165] + ChunkCodecCore v1.0.1 [4c0bbee4] + ChunkCodecLibZlib v1.0.0 [55437552] + ChunkCodecLibZstd v1.0.0 [944b1d66] + CodecZlib v0.7.8 [3da002f7] ↑ ColorTypes v0.11.5 ⇒ v0.12.1 [34da2185] ↑ Compat v4.12.0 ⇒ v4.18.1 [f0e56b4a] + ConcurrentUtilities v2.5.0 [a93c6f00] ↑ DataFrames v1.6.1 ⇒ v1.8.1 [864edb3b] ↑ DataStructures v0.18.16 ⇒ v0.19.3 [31c24e10] ↑ Distributions v0.25.107 ⇒ v0.25.123 [ffbed154] ↑ DocStringExtensions v0.9.3 ⇒ v0.9.5 [e30172f5] + Documenter v1.16.1 [fa6b7ba4] - DualNumbers v0.6.8 [460bff9d] + ExceptionUnwrapping v0.1.11 [7a1cc6ca] ↑ FFTW v1.8.0 ⇒ v1.10.0 [5789e2e9] + FileIO v1.17.1 [1a297f60] ↑ FillArrays v1.9.3 ⇒ v1.16.0 [d7ba0133] + Git v1.5.0 [86223c79] + Graphs v1.13.3 [cd3eb016] + HTTP v1.10.19 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] ↑ HypergeometricFunctions v0.3.23 ⇒ v0.3.28 [b5f81e59] + IOCapture v1.0.0 [d25df0c9] + Inflate v0.1.5 [842dd82b] ↑ InlineStrings v1.4.1 ⇒ v1.4.5 [a98d9a8b] ↑ Interpolations v0.15.1 ⇒ v0.16.2 [41ab1584] ↑ InvertedIndices v1.3.0 ⇒ v1.3.1 [92d709cd] ↑ IrrationalConstants v0.2.2 ⇒ v0.2.6 [033835bb] + JLD2 v0.6.3 [692b3bcd] ↑ JLLWrappers v1.5.0 ⇒ v1.7.1 [682c06a0] + JSON v1.4.0 [5ab0869b] ↑ KernelDensity v0.6.8 ⇒ v0.6.10 [b964fa9f] ↑ LaTeXStrings v1.3.1 ⇒ v1.4.0 [0e77f7df] + LazilyInitializedFields v1.3.0 [16fef848] + LiveServer v1.5.0 [2ab3a3ac] ↑ LogExpFunctions v0.3.26 ⇒ v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 ⌅ [6c6e2e6c] + MIMEs v0.1.4 [1914dd2f] + MacroTools v0.5.16 [d0879d2d] + MarkdownAST v0.1.2 [739be429] + MbedTLS v1.1.9 [fa8bd995] + MetaGraphsNext v0.7.5 [e1d29d7a] ↑ Missings v1.1.0 ⇒ v1.2.0 [77ba4419] - NaNMath v1.0.2 [6fe1bfb0] ↑ OffsetArrays v1.13.0 ⇒ v1.17.0 [4d8831e6] + OpenSSL v1.6.1 [bac558e1] ↑ OrderedCollections v1.6.3 ⇒ v1.8.1 [90014a1f] ↑ PDMats v0.11.31 ⇒ v0.11.37 [69de0a69] ↑ Parsers v2.8.1 ⇒ v2.8.3 [aea7be01] ↑ PrecompileTools v1.2.0 ⇒ v1.3.3 [21216c6a] ↑ Preferences v1.4.1 ⇒ v1.5.1 [08abe8d2] ↑ PrettyTables v2.3.2 ⇒ v3.1.2 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] ↑ QuadGK v2.9.4 ⇒ v2.11.2 [2792f1a3] + RegistryInstances v0.1.0 [ae029012] ↑ Requires v1.3.0 ⇒ v1.3.1 [79098fc4] ↑ Rmath v0.7.1 ⇒ v0.9.0 [321657f4] ↑ ScientificTypes v3.0.2 ⇒ v3.1.2 [7e506255] + ScopedValues v1.5.0 [91c51154] ↑ SentinelArrays v1.4.3 ⇒ v1.4.9 [777ac1f9] + SimpleBufferStream v1.2.0 [699a6c99] + SimpleTraits v0.9.5 [a2af1166] ↑ SortingAlgorithms v1.2.1 ⇒ v1.2.2 [276daf66] ↑ SpecialFunctions v2.3.1 ⇒ v2.6.1 [90137ffa] ↑ StaticArrays v1.9.2 ⇒ v1.9.16 [1e83bf80] ↑ StaticArraysCore v1.4.2 ⇒ v1.4.4 [64bff920] ↑ StatisticalTraits v3.4.0 ⇒ v3.5.0 [10745b16] ↑ Statistics v1.10.0 ⇒ v1.11.1 [82ae8749] ↑ StatsAPI v1.7.0 ⇒ v1.8.0 [2913bbd2] ↑ StatsBase v0.34.2 ⇒ v0.34.10 [4c63d2b9] ↑ StatsFuns v1.3.0 ⇒ v1.5.2 [892a3eda] ↑ StringManipulation v0.3.4 ⇒ v0.4.2 [ec057cc2] + StructUtils v2.6.2 [bd369af6] ↑ Tables v1.11.1 ⇒ v1.12.1 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.6.1 [efce3f68] ↑ WoodburyMatrices v1.0.0 ⇒ v1.1.0 [2e619515] + Expat_jll v2.7.3+0 [f5851436] ↑ FFTW_jll v3.3.10+0 ⇒ v3.3.11+0 [020c3dae] + Git_LFS_jll v3.7.0+0 [f8c6e375] + Git_jll v2.52.0+0 [1d5cc7b8] ↑ IntelOpenMP_jll v2024.0.2+0 ⇒ v2025.2.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] ↑ MKL_jll v2024.0.0+0 ⇒ v2025.2.0+0 [c8ffd9c3] ↑ MbedTLS_jll v2.28.2+1 ⇒ v2.28.1010+0 [9bd350c2] + OpenSSH_jll v10.2.1+0 [efe28fd5] ↑ OpenSpecFun_jll v0.5.5+0 ⇒ v0.5.6+0 [f50d1b31] ↑ Rmath_jll v0.4.0+0 ⇒ v0.5.1+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] ↑ ArgTools v1.1.1 ⇒ v1.1.2 [56f22d72] ~ Artifacts ⇒ v1.11.0 [2a0f44e3] ~ Base64 ⇒ v1.11.0 [ade2ca70] ~ Dates ⇒ v1.11.0 [8ba89e20] ~ Distributed ⇒ v1.11.0 [f43a241f] ↑ Downloads v1.6.0 ⇒ v1.7.0 [7b1f6079] ~ FileWatching ⇒ v1.11.0 [9fa8497b] ~ Future ⇒ v1.11.0 [b77e0a4c] ~ InteractiveUtils ⇒ v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] ~ LazyArtifacts ⇒ v1.11.0 [b27032c2] ↑ LibCURL v0.6.4 ⇒ v1.0.0 [76f85450] ~ LibGit2 ⇒ v1.11.0 [8f399da3] ~ Libdl ⇒ v1.11.0 [37e2e46d] ~ LinearAlgebra ⇒ v1.13.0 [56ddb016] ~ Logging ⇒ v1.11.0 [d6f4376e] ~ Markdown ⇒ v1.11.0 [a63ad114] ~ Mmap ⇒ v1.11.0 [ca575930] ↑ NetworkOptions v1.2.0 ⇒ v1.3.0 [44cfe95a] ↑ Pkg v1.10.0 ⇒ v1.14.0 [de0858da] ~ Printf ⇒ v1.11.0 [3fa0cd96] ~ REPL ⇒ v1.11.0 [9a3f8284] ~ Random ⇒ v1.11.0 [ea8e919c] ↑ SHA v0.7.0 ⇒ v1.0.0 [9e88b42a] ~ Serialization ⇒ v1.11.0 [1a1011a3] ~ SharedArrays ⇒ v1.11.0 [6462fe0b] ~ Sockets ⇒ v1.11.0 [2f01184e] ↑ SparseArrays v1.10.0 ⇒ v1.13.0 [f489334b] + StyledStrings v1.13.0 [8dfed614] ~ Test ⇒ v1.11.0 [cf7118a7] ~ UUIDs ⇒ v1.11.0 [4ec0a83e] ~ Unicode ⇒ v1.11.0 [e66e0078] ↑ CompilerSupportLibraries_jll v1.0.5+1 ⇒ v1.3.0+1 [deac9b47] ↑ LibCURL_jll v8.4.0+0 ⇒ v8.18.0+0 [e37daf67] ↑ LibGit2_jll v1.6.4+0 ⇒ v1.9.2+0 [29816b5a] ↑ LibSSH2_jll v1.11.0+1 ⇒ v1.11.3+1 [14a3606d] ↑ MozillaCACerts_jll v2023.1.10 ⇒ v2025.12.2 [4536629a] ↑ OpenBLAS_jll v0.3.23+2 ⇒ v0.3.29+0 [05823500] ↑ OpenLibm_jll v0.8.1+2 ⇒ v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] ↑ SuiteSparse_jll v7.2.1+1 ⇒ v7.10.1+0 [83775a58] ↑ Zlib_jll v1.2.13+1 ⇒ v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] ↑ libblastrampoline_jll v5.8.0+1 ⇒ v5.15.0+0 [8e850ede] ↑ nghttp2_jll v1.52.0+1 ⇒ v1.68.0+1 [3f19e933] ↑ p7zip_jll v17.4.0+2 ⇒ v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_XxTFGF/Project.toml` [77580646] BioFindr v1.0.5 [a93c6f00] DataFrames v1.8.1 [31c24e10] Distributions v0.25.123 [5ab0869b] KernelDensity v0.6.10 [321657f4] ScientificTypes v3.1.2 [276daf66] SpecialFunctions v2.6.1 [10745b16] Statistics v1.11.1 [2913bbd2] StatsBase v0.34.10 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_XxTFGF/Manifest.toml` [a4c015fc] ANSIColoredPrinters v0.0.1 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [ec485272] ArnoldiMethod v0.4.0 [13072b0f] AxisAlgorithms v1.1.0 [77580646] BioFindr v1.0.5 [d1d4a3ce] BitFlags v0.1.9 [324d7699] CategoricalArrays v1.0.2 [d360d2e6] ChainRulesCore v1.26.0 [0b6fb165] ChunkCodecCore v1.0.1 [4c0bbee4] ChunkCodecLibZlib v1.0.0 [55437552] ChunkCodecLibZstd v1.0.0 [944b1d66] CodecZlib v0.7.8 [3da002f7] ColorTypes v0.12.1 [34da2185] Compat v4.18.1 [f0e56b4a] ConcurrentUtilities v2.5.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [31c24e10] Distributions v0.25.123 [ffbed154] DocStringExtensions v0.9.5 [e30172f5] Documenter v1.16.1 [460bff9d] ExceptionUnwrapping v0.1.11 [7a1cc6ca] FFTW v1.10.0 [5789e2e9] FileIO v1.17.1 [1a297f60] FillArrays v1.16.0 [53c48c17] FixedPointNumbers v0.8.5 [d7ba0133] Git v1.5.0 [86223c79] Graphs v1.13.3 [cd3eb016] HTTP v1.10.19 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [b5f81e59] IOCapture v1.0.0 [d25df0c9] Inflate v0.1.5 [842dd82b] InlineStrings v1.4.5 [a98d9a8b] Interpolations v0.16.2 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.6.3 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.4.0 [5ab0869b] KernelDensity v0.6.10 [b964fa9f] LaTeXStrings v1.4.0 [0e77f7df] LazilyInitializedFields v1.3.0 [16fef848] LiveServer v1.5.0 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 ⌅ [6c6e2e6c] MIMEs v0.1.4 [1914dd2f] MacroTools v0.5.16 [d0879d2d] MarkdownAST v0.1.2 [739be429] MbedTLS v1.1.9 [fa8bd995] MetaGraphsNext v0.7.5 [e1d29d7a] Missings v1.2.0 [6fe1bfb0] OffsetArrays v1.17.0 [4d8831e6] OpenSSL v1.6.1 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.37 [69de0a69] Parsers v2.8.3 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.1 [08abe8d2] PrettyTables v3.1.2 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [c84ed2f1] Ratios v0.4.5 [189a3867] Reexport v1.2.2 [2792f1a3] RegistryInstances v0.1.0 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [321657f4] ScientificTypes v3.1.2 [30f210dd] ScientificTypesBase v3.0.0 [7e506255] ScopedValues v1.5.0 [91c51154] SentinelArrays v1.4.9 [777ac1f9] SimpleBufferStream v1.2.0 [699a6c99] SimpleTraits v0.9.5 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.6.1 [90137ffa] StaticArrays v1.9.16 [1e83bf80] StaticArraysCore v1.4.4 [64bff920] StatisticalTraits v3.5.0 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.10 [4c63d2b9] StatsFuns v1.5.2 [892a3eda] StringManipulation v0.4.2 [ec057cc2] StructUtils v2.6.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [3bb67fe8] TranscodingStreams v0.11.3 [5c2747f8] URIs v1.6.1 [efce3f68] WoodburyMatrices v1.1.0 [2e619515] Expat_jll v2.7.3+0 [f5851436] FFTW_jll v3.3.11+0 [020c3dae] Git_LFS_jll v3.7.0+0 [f8c6e375] Git_jll v2.52.0+0 [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0 [94ce4f54] Libiconv_jll v1.18.0+0 [856f044c] MKL_jll v2025.2.0+0 [c8ffd9c3] MbedTLS_jll v2.28.1010+0 [9bd350c2] OpenSSH_jll v10.2.1+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [1317d2d5] oneTBB_jll v2022.0.0+1 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.18.0+0 [e37daf67] LibGit2_jll v1.9.2+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Test Summary: | Pass Total Time BioFindr.jl | 145 145 1m11.9s Testing BioFindr tests passed Testing completed after 593.55s PkgEval succeeded after 1272.74s