Package evaluation to test PlantSimEngine on Julia 1.14.0-DEV.1563 (14ca1abc72*) started at 2026-01-16T00:00:29.912 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 9.89s ################################################################################ # Installation # Installing PlantSimEngine... Resolving package versions... Installed ChunkCodecLibZstd ─────────── v1.0.0 Installed CompositionsBase ──────────── v0.1.2 Installed MicroCollections ──────────── v0.2.0 Installed NameResolution ────────────── v0.1.5 Installed FilePathsBase ─────────────── v0.9.24 Installed MacroTools ────────────────── v0.5.16 Installed URIs ──────────────────────── v1.6.1 Installed DataStructures ────────────── v0.19.3 Installed DefineSingletons ──────────── v0.1.2 Installed AbstractTrees ─────────────── v0.4.5 Installed InlineStrings ─────────────── v1.4.5 Installed DelimitedFiles ────────────── v1.9.1 Installed MetaGraphsNext ────────────── v0.7.5 Installed MutableNamedTuples ────────── v0.1.3 Installed JLD2 ──────────────────────── v0.6.3 Installed FLoops ────────────────────── v0.2.2 Installed ConstructionBase ──────────── v1.6.0 Installed ContextVariablesX ─────────── v0.1.3 Installed UnicodeFun ────────────────── v0.4.1 Installed CodecZlib ─────────────────── v0.7.8 Installed ZipFile ───────────────────── v0.10.1 Installed ArnoldiMethod ─────────────── v0.4.0 Installed JuliaVariables ────────────── v0.2.4 Installed ConcurrentUtilities ───────── v2.5.0 Installed ExceptionUnwrapping ───────── v0.1.11 Installed HashArrayMappedTries ──────── v0.2.0 Installed OrderedCollections ────────── v1.8.1 Installed TranscodingStreams ────────── v0.11.3 Installed Compat ────────────────────── v4.18.1 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed ZipArchives ───────────────── v2.6.0 Installed ProgressLogging ───────────── v0.1.6 Installed DataAPI ───────────────────── v1.16.0 Installed InvertedIndices ───────────── v1.3.1 Installed Statistics ────────────────── v1.11.1 Installed InitialValues ─────────────── v0.3.1 Installed CodecInflate64 ────────────── v0.1.3 Installed PrecompileTools ───────────── v1.3.3 Installed DataValueInterfaces ───────── v1.0.0 Installed StringEncodings ───────────── v0.3.7 Installed PlantSimEngine ────────────── v0.13.2 Installed MbedTLS ───────────────────── v1.1.9 Installed ArgCheck ──────────────────── v2.5.0 Installed SentinelArrays ────────────── v1.4.9 Installed FileIO ────────────────────── v1.17.1 Installed OpenSSL ───────────────────── v1.6.1 Installed LoggingExtras ─────────────── v1.2.0 Installed StaticArraysCore ──────────── v1.4.4 Installed PrettyPrint ───────────────── v0.2.0 Installed StaticArrays ──────────────── v1.9.16 Installed CodeTracking ──────────────── v3.0.0 Installed Term ──────────────────────── v2.0.8 Installed BangBang ──────────────────── v0.4.6 Installed Requires ──────────────────── v1.3.1 Installed SimpleTraits ──────────────── v0.9.5 Installed StringManipulation ────────── v0.4.2 Installed CSV ───────────────────────── v0.10.15 Installed HTTP ──────────────────────── v1.10.19 Installed YAML ──────────────────────── v0.4.16 Installed Highlights ────────────────── v0.5.3 Installed ChunkCodecLibZlib ─────────── v1.0.0 Installed BitFlags ──────────────────── v0.1.9 Installed FLoopsBase ────────────────── v0.1.1 Installed Parsers ───────────────────── v2.8.3 Installed JSON ──────────────────────── v0.21.4 Installed ScopedValues ──────────────── v1.5.0 Installed PrettyTables ──────────────── v2.4.0 Installed Parameters ────────────────── v0.12.3 Installed SplittablesBase ───────────── v0.1.15 Installed MultiScaleTreeGraph ───────── v0.14.4 Installed Tables ────────────────────── v1.12.1 Installed XML2_jll ──────────────────── v2.15.1+0 Installed Transducers ───────────────── v0.4.85 Installed MyterialColors ────────────── v0.3.0 Installed InverseFunctions ──────────── v0.1.17 Installed Setfield ──────────────────── v1.1.2 Installed Reexport ──────────────────── v1.2.2 Installed SimpleBufferStream ────────── v1.2.0 Installed DataFrames ────────────────── v1.8.1 Installed Preferences ───────────────── v1.5.1 Installed Missings ──────────────────── v1.2.0 Installed Baselet ───────────────────── v0.1.1 Installed WeakRefStrings ────────────── v1.4.2 Installed PooledArrays ──────────────── v1.4.3 Installed EzXML ─────────────────────── v1.2.3 Installed JLLWrappers ───────────────── v1.7.1 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed TableTraits ───────────────── v1.0.1 Installed LaTeXStrings ──────────────── v1.4.0 Installed MbedTLS_jll ───────────────── v2.28.1010+0 Installed ChunkCodecCore ────────────── v1.0.1 Installed Crayons ───────────────────── v4.1.1 Installed UnPack ────────────────────── v1.0.2 Installed XLSX ──────────────────────── v0.10.4 Installed SortingAlgorithms ─────────── v1.2.2 Installed WorkerUtilities ───────────── v1.6.1 Installed MLStyle ───────────────────── v0.4.17 Installed DocStringExtensions ───────── v0.9.5 Installed PlantMeteo ────────────────── v0.6.1 Installed Inflate ───────────────────── v0.1.5 Installed InputBuffers ──────────────── v1.1.1 Installed Accessors ─────────────────── v0.1.43 Installed Graphs ────────────────────── v1.13.3 Installing 4 artifacts Installed artifact XLSX_relocatable_data 6.0 KiB Installed artifact Libiconv 1.9 MiB Installed artifact XML2 2.2 MiB Installed artifact MbedTLS 2.2 MiB Updating `~/.julia/environments/v1.14/Project.toml` [9a576370] + PlantSimEngine v0.13.2 Updating `~/.julia/environments/v1.14/Manifest.toml` [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.43 [dce04be8] + ArgCheck v2.5.0 [ec485272] + ArnoldiMethod v0.4.0 [198e06fe] + BangBang v0.4.6 [9718e550] + Baselet v0.1.1 [d1d4a3ce] + BitFlags v0.1.9 [336ed68f] + CSV v0.10.15 [0b6fb165] + ChunkCodecCore v1.0.1 [4c0bbee4] + ChunkCodecLibZlib v1.0.0 [55437552] + ChunkCodecLibZstd v1.0.0 [da1fd8a2] + CodeTracking v3.0.0 [6309b1aa] + CodecInflate64 v0.1.3 [944b1d66] + CodecZlib v0.7.8 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [f0e56b4a] + ConcurrentUtilities v2.5.0 [187b0558] + ConstructionBase v1.6.0 [6add18c4] + ContextVariablesX v0.1.3 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [8bb1440f] + DelimitedFiles v1.9.1 [ffbed154] + DocStringExtensions v0.9.5 [460bff9d] + ExceptionUnwrapping v0.1.11 [8f5d6c58] + EzXML v1.2.3 [cc61a311] + FLoops v0.2.2 [b9860ae5] + FLoopsBase v0.1.1 [5789e2e9] + FileIO v1.17.1 [48062228] + FilePathsBase v0.9.24 [86223c79] + Graphs v1.13.3 [cd3eb016] + HTTP v1.10.19 [076d061b] + HashArrayMappedTries v0.2.0 [eafb193a] + Highlights v0.5.3 [d25df0c9] + Inflate v0.1.5 [22cec73e] + InitialValues v0.3.1 [842dd82b] + InlineStrings v1.4.5 [0c81fc1b] + InputBuffers v1.1.1 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [033835bb] + JLD2 v0.6.3 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [b14d175d] + JuliaVariables v0.2.4 [b964fa9f] + LaTeXStrings v1.4.0 [e6f89c97] + LoggingExtras v1.2.0 [d8e11817] + MLStyle v0.4.17 [1914dd2f] + MacroTools v0.5.16 [739be429] + MbedTLS v1.1.9 [fa8bd995] + MetaGraphsNext v0.7.5 [128add7d] + MicroCollections v0.2.0 [e1d29d7a] + Missings v1.2.0 [dd4a991b] + MultiScaleTreeGraph v0.14.4 [af6c499f] + MutableNamedTuples v0.1.3 [1c23619d] + MyterialColors v0.3.0 [71a1bf82] + NameResolution v0.1.5 [4d8831e6] + OpenSSL v1.6.1 [bac558e1] + OrderedCollections v1.8.1 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [4630fe09] + PlantMeteo v0.6.1 [9a576370] + PlantSimEngine v0.13.2 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [8162dcfd] + PrettyPrint v0.2.0 ⌅ [08abe8d2] + PrettyTables v2.4.0 [33c8b6b6] + ProgressLogging v0.1.6 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [7e506255] + ScopedValues v1.5.0 [91c51154] + SentinelArrays v1.4.9 [efcf1570] + Setfield v1.1.2 [777ac1f9] + SimpleBufferStream v1.2.0 [699a6c99] + SimpleTraits v0.9.5 [a2af1166] + SortingAlgorithms v1.2.2 [171d559e] + SplittablesBase v0.1.15 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [69024149] + StringEncodings v0.3.7 [892a3eda] + StringManipulation v0.4.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [22787eb5] + Term v2.0.8 [3bb67fe8] + TranscodingStreams v0.11.3 [28d57a85] + Transducers v0.4.85 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [1cfade01] + UnicodeFun v0.4.1 [ea10d353] + WeakRefStrings v1.4.2 [76eceee3] + WorkerUtilities v1.6.1 [fdbf4ff8] + XLSX v0.10.4 [ddb6d928] + YAML v0.4.16 [49080126] + ZipArchives v2.6.0 [a5390f91] + ZipFile v0.10.1 [94ce4f54] + Libiconv_jll v1.18.0+0 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [02c8fc9c] + XML2_jll v2.15.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.18.0+0 [e37daf67] + LibGit2_jll v1.9.2+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.12.2 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 13.08s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4791.7 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. Precompiling package dependencies... Precompiling packages... 4713.2 ms ✓ MacroTools 1735.1 ms ✓ InlineStrings 908.1 ms ✓ Reexport 1217.9 ms ✓ ConstructionBase 973.7 ms ✓ PrettyPrint 829.6 ms ✓ DataValueInterfaces 979.1 ms ✓ LazilyInitializedFields 1072.5 ms ✓ Inflate 989.6 ms ✓ ArgCheck 1401.9 ms ✓ TranscodingStreams 928.4 ms ✓ LaTeXStrings 1062.5 ms ✓ ChunkCodecCore 2340.7 ms ✓ Baselet 1208.7 ms ✓ Statistics 1039.2 ms ✓ StaticArraysCore 918.4 ms ✓ SimpleBufferStream 1088.1 ms ✓ ANSIColoredPrinters 961.9 ms ✓ DataAPI 1326.3 ms ✓ URIs 985.4 ms ✓ InputBuffers 27049.6 ms ✓ MLStyle 952.7 ms ✓ InvertedIndices 1086.7 ms ✓ InverseFunctions 908.0 ms ✓ CompositionsBase 940.4 ms ✓ BitFlags 1430.7 ms ✓ AbstractTrees 1758.6 ms ✓ InitialValues 1092.3 ms ✓ WorkerUtilities 1028.2 ms ✓ MyterialColors 922.3 ms ✓ UnPack 1448.4 ms ✓ OrderedCollections 995.2 ms ✓ MutableNamedTuples 967.0 ms ✓ HashArrayMappedTries 1171.8 ms ✓ ProgressLogging 1184.8 ms ✓ DocStringExtensions 917.3 ms ✓ DefineSingletons 867.3 ms ✓ IteratorInterfaceExtensions 1948.1 ms ✓ Crayons 979.0 ms ✓ IOCapture 1078.7 ms ✓ DelimitedFiles 1364.9 ms ✓ ZipFile 1289.7 ms ✓ Requires 2129.6 ms ✓ ConcurrentUtilities 2535.4 ms ✓ SentinelArrays 1256.0 ms ✓ LoggingExtras 2019.8 ms ✓ CodeTracking 3792.7 ms ✓ UnicodeFun 1714.4 ms ✓ Compat 1501.2 ms ✓ Preferences 1986.2 ms ✓ ExceptionUnwrapping 3628.5 ms ✓ SimpleTraits 940.5 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 910.2 ms ✓ NameResolution 6176.0 ms ✓ RegistryInstances 1785.2 ms ✓ CodecInflate64 1302.6 ms ✓ CodecZlib 1269.3 ms ✓ ChunkCodecLibZlib 1717.3 ms ✓ ChunkCodecLibZstd 1671.3 ms ✓ Statistics → SparseArraysExt 1167.9 ms ✓ Missings 1193.8 ms ✓ PooledArrays 1003.0 ms ✓ InverseFunctions → InverseFunctionsDatesExt 1902.0 ms ✓ InverseFunctions → InverseFunctionsTestExt 934.5 ms ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 4367.4 ms ✓ OpenSSL 2021.7 ms ✓ MarkdownAST 1054.9 ms ✓ Parameters 3782.8 ms ✓ DataStructures 1038.2 ms ✓ ScopedValues 12052.6 ms ✓ Highlights 1049.0 ms ✓ TableTraits 9764.6 ms ✓ FileIO 1060.3 ms ✓ Compat → CompatLinearAlgebraExt 1128.7 ms ✓ PrecompileTools 1316.2 ms ✓ JLLWrappers 3286.5 ms ✓ Setfield 11962.5 ms ✓ JuliaVariables 5510.5 ms ✓ Accessors 1242.8 ms ✓ SortingAlgorithms 1949.7 ms ✓ Tables 2245.2 ms ✓ FilePathsBase 6914.3 ms ✓ Aqua 1138.5 ms ✓ ContextVariablesX 3363.5 ms ✓ StringManipulation 14363.5 ms ✓ StaticArrays 17601.0 ms ✓ Parsers 10078.0 ms ✓ ZipArchives 52771.9 ms ✓ JLD2 1574.7 ms ✓ Git_LFS_jll 1925.0 ms ✓ OpenSSH_jll 1912.0 ms ✓ Libiconv_jll 1750.4 ms ✓ MbedTLS_jll 1556.6 ms ✓ Expat_jll 3822.1 ms ✓ SplittablesBase 1992.0 ms ✓ Accessors → TestExt 2617.0 ms ✓ Accessors → LinearAlgebraExt 82255.2 ms ✓ Term 3156.8 ms ✓ FilePathsBase → FilePathsBaseTestExt 1165.7 ms ✓ FilePathsBase → FilePathsBaseMmapExt 1380.9 ms ✓ FLoopsBase 29642.3 ms ✓ PrettyTables 4328.9 ms ✓ ArnoldiMethod 1549.3 ms ✓ StaticArrays → StaticArraysStatisticsExt 1592.6 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1869.1 ms ✓ Accessors → StaticArraysExt 4280.4 ms ✓ JSON 1012.8 ms ✓ InlineStrings → ParsersExt 5788.3 ms ✓ JLD2 → UnPackExt 1124.2 ms ✓ StringEncodings 1586.1 ms ✓ XML2_jll 1845.0 ms ✓ MbedTLS 1608.3 ms ✓ Git_jll 1952.0 ms ✓ BangBang 69900.7 ms ✓ DataFrames 8675.7 ms ✓ Graphs 2837.7 ms ✓ BenchmarkTools 2468.5 ms ✓ WeakRefStrings 2513.0 ms ✓ YAML 1851.3 ms ✓ EzXML 27043.3 ms ✓ HTTP 1069.0 ms ✓ Git 1489.4 ms ✓ BangBang → BangBangTablesExt 2035.9 ms ✓ BangBang → BangBangStaticArraysExt 3044.6 ms ✓ MicroCollections 6587.8 ms ✓ BangBang → BangBangDataFramesExt 11033.2 ms ✓ MetaGraphsNext 29496.3 ms ✓ CSV 2979.4 ms ✓ XLSX 7238.0 ms ✓ FileIO → HTTPExt 48888.2 ms ✓ Documenter 7988.3 ms ✓ Transducers 17222.0 ms ✓ PlantMeteo 16971.3 ms ✓ MultiScaleTreeGraph 6754.1 ms ✓ Transducers → TransducersDataFramesExt 14716.0 ms ✓ FLoops 57651.4 ms ✓ PlantSimEngine 136 dependencies successfully precompiled in 806 seconds. 38 already precompiled. Precompilation completed after 817.66s ################################################################################ # Testing # Testing PlantSimEngine Status `/tmp/jl_ZT79oi/Project.toml` [4c88cf16] Aqua v0.8.14 [6e4b80f9] BenchmarkTools v1.6.3 [336ed68f] CSV v0.10.15 [a93c6f00] DataFrames v1.8.1 [e30172f5] Documenter v1.16.1 [dd4a991b] MultiScaleTreeGraph v0.14.4 [4630fe09] PlantMeteo v0.6.1 [9a576370] PlantSimEngine v0.13.2 [10745b16] Statistics v1.11.1 [bd369af6] Tables v1.12.1 [ade2ca70] Dates v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_ZT79oi/Manifest.toml` [a4c015fc] ANSIColoredPrinters v0.0.1 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.43 [4c88cf16] Aqua v0.8.14 [dce04be8] ArgCheck v2.5.0 [ec485272] ArnoldiMethod v0.4.0 [198e06fe] BangBang v0.4.6 [9718e550] Baselet v0.1.1 [6e4b80f9] BenchmarkTools v1.6.3 [d1d4a3ce] BitFlags v0.1.9 [336ed68f] CSV v0.10.15 [0b6fb165] ChunkCodecCore v1.0.1 [4c0bbee4] ChunkCodecLibZlib v1.0.0 [55437552] ChunkCodecLibZstd v1.0.0 [da1fd8a2] CodeTracking v3.0.0 [6309b1aa] CodecInflate64 v0.1.3 [944b1d66] CodecZlib v0.7.8 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [f0e56b4a] ConcurrentUtilities v2.5.0 [187b0558] ConstructionBase v1.6.0 [6add18c4] ContextVariablesX v0.1.3 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [244e2a9f] DefineSingletons v0.1.2 [8bb1440f] DelimitedFiles v1.9.1 [ffbed154] DocStringExtensions v0.9.5 [e30172f5] Documenter v1.16.1 [460bff9d] ExceptionUnwrapping v0.1.11 [8f5d6c58] EzXML v1.2.3 [cc61a311] FLoops v0.2.2 [b9860ae5] FLoopsBase v0.1.1 [5789e2e9] FileIO v1.17.1 [48062228] FilePathsBase v0.9.24 [d7ba0133] Git v1.5.0 [86223c79] Graphs v1.13.3 [cd3eb016] HTTP v1.10.19 [076d061b] HashArrayMappedTries v0.2.0 [eafb193a] Highlights v0.5.3 [b5f81e59] IOCapture v1.0.0 [d25df0c9] Inflate v0.1.5 [22cec73e] InitialValues v0.3.1 [842dd82b] InlineStrings v1.4.5 [0c81fc1b] InputBuffers v1.1.1 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.6.3 [692b3bcd] JLLWrappers v1.7.1 ⌅ [682c06a0] JSON v0.21.4 [b14d175d] JuliaVariables v0.2.4 [b964fa9f] LaTeXStrings v1.4.0 [0e77f7df] LazilyInitializedFields v1.3.0 [e6f89c97] LoggingExtras v1.2.0 [d8e11817] MLStyle v0.4.17 [1914dd2f] MacroTools v0.5.16 [d0879d2d] MarkdownAST v0.1.2 [739be429] MbedTLS v1.1.9 [fa8bd995] MetaGraphsNext v0.7.5 [128add7d] MicroCollections v0.2.0 [e1d29d7a] Missings v1.2.0 [dd4a991b] MultiScaleTreeGraph v0.14.4 [af6c499f] MutableNamedTuples v0.1.3 [1c23619d] MyterialColors v0.3.0 [71a1bf82] NameResolution v0.1.5 [4d8831e6] OpenSSL v1.6.1 [bac558e1] OrderedCollections v1.8.1 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [4630fe09] PlantMeteo v0.6.1 [9a576370] PlantSimEngine v0.13.2 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.1 [8162dcfd] PrettyPrint v0.2.0 ⌅ [08abe8d2] PrettyTables v2.4.0 [33c8b6b6] ProgressLogging v0.1.6 [189a3867] Reexport v1.2.2 [2792f1a3] RegistryInstances v0.1.0 [ae029012] Requires v1.3.1 [7e506255] ScopedValues v1.5.0 [91c51154] SentinelArrays v1.4.9 [efcf1570] Setfield v1.1.2 [777ac1f9] SimpleBufferStream v1.2.0 [699a6c99] SimpleTraits v0.9.5 [a2af1166] SortingAlgorithms v1.2.2 [171d559e] SplittablesBase v0.1.15 [90137ffa] StaticArrays v1.9.16 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [69024149] StringEncodings v0.3.7 [892a3eda] StringManipulation v0.4.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [22787eb5] Term v2.0.8 [3bb67fe8] TranscodingStreams v0.11.3 [28d57a85] Transducers v0.4.85 [5c2747f8] URIs v1.6.1 [3a884ed6] UnPack v1.0.2 [1cfade01] UnicodeFun v0.4.1 [ea10d353] WeakRefStrings v1.4.2 [76eceee3] WorkerUtilities v1.6.1 [fdbf4ff8] XLSX v0.10.4 [ddb6d928] YAML v0.4.16 [49080126] ZipArchives v2.6.0 [a5390f91] ZipFile v0.10.1 [2e619515] Expat_jll v2.7.3+0 [020c3dae] Git_LFS_jll v3.7.0+0 [f8c6e375] Git_jll v2.52.0+0 [94ce4f54] Libiconv_jll v1.18.0+0 [c8ffd9c3] MbedTLS_jll v2.28.1010+0 [9bd350c2] OpenSSH_jll v10.2.1+0 [02c8fc9c] XML2_jll v2.15.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [9abbd945] Profile v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.18.0+0 [e37daf67] LibGit2_jll v1.9.2+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ┌ Warning: Ignoring incompatible compat entry `SHA = "0.7.0"` in "/home/pkgeval/.julia/packages/PlantSimEngine/AQ037/Project.toml". │ SHA is a non-upgradable standard library with version 1.0.0 in the current Julia version. │ Fix by setting compat to "0.7.0, 1" to mark support of the current version 1.0.0. └ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:517 [ Info: Some variables must be initialized before simulation: (process1 = (:var1, :var2), process2 = (:var1,)) (see `to_initialize()`) [ Info: Model Process3Model from process process3 needs a model that is a subtype of Process2Model in process process2, but the process is not parameterized in the ModelList. ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Process1Model, Process2Model, PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, PlantSimEngine.HelperNextTimestepModel, MultiScaleModel{PlantSimEngine.HelperCurrentTimestepModel, Vector{Pair{Union{Symbol, PreviousTimeStep}, Union{Pair{String, Symbol}, Vector{Pair{String, Symbol}}}}}}, Status{(:var1, :var2, :current_timestep, :next_timestep), Tuple{Base.RefValue{Float64}, Base.RefValue{Float64}, Base.RefValue{Int64}, Base.RefValue{Int64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Process1Model, Process2Model, PlantSimEngine.HelperNextTimestepModel, MultiScaleModel{PlantSimEngine.HelperCurrentTimestepModel, Vector{Pair{Union{Symbol, PreviousTimeStep}, Union{Pair{String, Symbol}, Vector{Pair{String, Symbol}}}}}}, Status{(:var1, :var2, :current_timestep, :next_timestep), Tuple{Base.RefValue{Float64}, Base.RefValue{Float64}, Base.RefValue{Int64}, Base.RefValue{Int64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 WARNING: Method definition process_(Type{PlantSimEngine.AbstractTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Array{Float64, 1}) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Any) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition inputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition outputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})() in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{ToyLAIModel, Beer{Float64}, ToyRUEGrowthModel{Float64}, PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, PlantSimEngine.HelperNextTimestepModel, MultiScaleModel{PlantSimEngine.HelperCurrentTimestepModel, Vector{Pair{Union{Symbol, PreviousTimeStep}, Union{Pair{String, Symbol}, Vector{Pair{String, Symbol}}}}}}, Status{(:current_timestep, :next_timestep), Tuple{Base.RefValue{Int64}, Base.RefValue{Int64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 WARNING: Method definition process_(Type{PlantSimEngine.AbstractTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Array{Float64, 1}) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Any) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition inputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition outputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})() in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition process_(Type{PlantSimEngine.AbstractTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Array{Float64, 1}) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Any) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition inputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition outputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})() in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition process_(Type{PlantSimEngine.AbstractTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Array{Float64, 1}) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Any) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition inputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition outputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})() in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition process_(Type{PlantSimEngine.AbstractTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Array{Float64, 1}) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Any) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition inputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition outputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})() in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition process_(Type{PlantSimEngine.AbstractTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Array{Float64, 1}) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Any) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition inputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition outputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})() in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition process_(Type{PlantSimEngine.AbstractTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Array{Float64, 1}) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Any) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition inputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition outputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})() in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition process_(Type{PlantSimEngine.AbstractTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Array{Float64, 1}) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Any) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition inputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition outputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})() in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Process1Model, Process2Model, Process3Model, PlantSimEngine.HelperNextTimestepModel, MultiScaleModel{PlantSimEngine.HelperCurrentTimestepModel, Vector{Pair{Union{Symbol, PreviousTimeStep}, Union{Pair{String, Symbol}, Vector{Pair{String, Symbol}}}}}}, Status{(:var1, :var2, :current_timestep, :next_timestep), Tuple{Base.RefValue{Float64}, Base.RefValue{Float64}, Base.RefValue{Int64}, Base.RefValue{Int64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Process1Model, Process2Model, Process3Model, Process4Model, Process5Model, Process6Model, PlantSimEngine.HelperNextTimestepModel, MultiScaleModel{PlantSimEngine.HelperCurrentTimestepModel, Vector{Pair{Union{Symbol, PreviousTimeStep}, Union{Pair{String, Symbol}, Vector{Pair{String, Symbol}}}}}}, Status{(:var9, :var0, :current_timestep, :next_timestep), Tuple{Base.RefValue{Float64}, Base.RefValue{Float64}, Base.RefValue{Int64}, Base.RefValue{Int64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Process1Model, Process2Model, Process3Model, Process4Model, Process5Model, Process6Model, Process7Model, PlantSimEngine.HelperNextTimestepModel, MultiScaleModel{PlantSimEngine.HelperCurrentTimestepModel, Vector{Pair{Union{Symbol, PreviousTimeStep}, Union{Pair{String, Symbol}, Vector{Pair{String, Symbol}}}}}}, Status{(:var0, :current_timestep, :next_timestep), Tuple{Base.RefValue{Float64}, Base.RefValue{Int64}, Base.RefValue{Int64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Process1Model, Process2Model, Process3Model, Process4Model, Process5Model, PlantSimEngine.HelperNextTimestepModel, MultiScaleModel{PlantSimEngine.HelperCurrentTimestepModel, Vector{Pair{Union{Symbol, PreviousTimeStep}, Union{Pair{String, Symbol}, Vector{Pair{String, Symbol}}}}}}, Status{(:var0, :current_timestep, :next_timestep), Tuple{Base.RefValue{Float64}, Base.RefValue{Int64}, Base.RefValue{Int64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Any, Vararg{Any}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: A parallel executor was provided (`executor=ThreadedEx()`) but some models cannot be run in parallel: ToyRUEGrowthModel{Float64}(0.3). The simulation will be run sequentially. Use `executor=SequentialEx()` to remove this warning. └ @ PlantSimEngine ~/.julia/packages/PlantSimEngine/AQ037/src/run.jl:210 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{ToyLAIModel, Beer{Float64}, ToyRUEGrowthModel{Float64}, ToyTestDegreeDaysCumulModel, PlantSimEngine.HelperNextTimestepModel, MultiScaleModel{PlantSimEngine.HelperCurrentTimestepModel, Vector{Pair{Union{Symbol, PreviousTimeStep}, Union{Pair{String, Symbol}, Vector{Pair{String, Symbol}}}}}}, Status{(:current_timestep, :next_timestep), Tuple{Base.RefValue{Int64}, Base.RefValue{Int64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 WARNING: Method definition process_(Type{PlantSimEngine.AbstractTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Array{Float64, 1}) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})(Any) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition inputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition outputs_(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model})() in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, Type{PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTt_Cu6Cab5197A130D4D7Fb7Cc069A71De4484D14Dea9Model, Any, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition process_(Type{PlantSimEngine.AbstractTtf3920A5Fb90905Db0Ee6F0Fece74Bea7F10349FdModel}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTtf3920A5Fb90905Db0Ee6F0Fece74Bea7F10349FdModel})(Array{Float64, 1}) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTtf3920A5Fb90905Db0Ee6F0Fece74Bea7F10349FdModel})(Any) in module PlantSimEngine at none:2 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition inputs_(PlantSimEngine.MyTtf3920A5Fb90905Db0Ee6F0Fece74Bea7F10349FdModel) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition outputs_(PlantSimEngine.MyTtf3920A5Fb90905Db0Ee6F0Fece74Bea7F10349FdModel) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition (::Type{PlantSimEngine.MyTtf3920A5Fb90905Db0Ee6F0Fece74Bea7F10349FdModel})() in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, Type{PlantSimEngine.MyTtf3920A5Fb90905Db0Ee6F0Fece74Bea7F10349FdModel}) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTtf3920A5Fb90905Db0Ee6F0Fece74Bea7F10349FdModel, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTtf3920A5Fb90905Db0Ee6F0Fece74Bea7F10349FdModel, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition run!(PlantSimEngine.MyTtf3920A5Fb90905Db0Ee6F0Fece74Bea7F10349FdModel, Any, Any, Any, Any, Any) in module PlantSimEngine at none:1 overwritten on the same line (check for duplicate calls to `include`). [ Info: Model Process3Model from process process3 needs a model that is a subtype of Process2Model in process process2, but the process is not parameterized in the ModelList. ┌ Warning: Parallelisation over objects was removed, (but may be reintroduced in the future). Parallelisation will only occur over timesteps. └ @ PlantSimEngine ~/.julia/packages/PlantSimEngine/AQ037/src/run.jl:283 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Process1Model, Process2Model, Process3Model, PlantSimEngine.MyVar10Ed51173F59F729F7656506E6F391Bd2F66B96A7Model, PlantSimEngine.HelperNextTimestepModel, MultiScaleModel{PlantSimEngine.HelperCurrentTimestepModel, Vector{Pair{Union{Symbol, PreviousTimeStep}, Union{Pair{String, Symbol}, Vector{Pair{String, Symbol}}}}}}, Status{(:var2, :current_timestep, :next_timestep), Tuple{Base.RefValue{Float64}, Base.RefValue{Int64}, Base.RefValue{Int64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: Parallelisation over objects was removed, (but may be reintroduced in the future). Parallelisation will only occur over timesteps. └ @ PlantSimEngine ~/.julia/packages/PlantSimEngine/AQ037/src/run.jl:154 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Process1Model, Process2Model, Process3Model}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 Issue in function #155 for node #3. 2 2 1 2 2 2 2 2 3 2 2 4 2 2 5 2 3 1 2 3 2 2 3 3 2 3 4 2 3 5 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Any}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Process1Model, Status{(:var1, :var2), Tuple{Base.RefValue{Float64}, Base.RefValue{Float64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Process1Model, Process2Model, Process3Model, Status{(:var1,), Tuple{Base.RefValue{Float64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 inputs and outputs of a mapping: Test Failed at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:111 Expression: collect(keys(ins)) == collect(keys(mapping_1)) Evaluated: ["Plant", "Internode", "Leaf", "Soil"] == ["Soil", "Internode", "Leaf", "Plant"] Stacktrace: [1] top-level scope @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:109 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2156 [inlined] [3] macro expansion @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:111 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:773 [inlined] inputs and outputs of a mapping: Test Failed at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:116 Expression: collect(keys(outs)) == collect(keys(mapping_1)) Evaluated: ["Plant", "Internode", "Leaf", "Soil"] == ["Soil", "Internode", "Leaf", "Plant"] Stacktrace: [1] top-level scope @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:109 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2156 [inlined] [3] macro expansion @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:116 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:773 [inlined] inputs and outputs of a mapping: Test Failed at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:122 Expression: collect(keys(vars)) == collect(keys(mapping_1)) Evaluated: ["Plant", "Internode", "Leaf", "Soil"] == ["Soil", "Internode", "Leaf", "Plant"] Stacktrace: [1] top-level scope @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:109 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2156 [inlined] [3] macro expansion @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:122 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:773 [inlined] Issue in function #155 for node #4. Status initialisation: Test Failed at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:133 Expression: collect(keys(organs_statuses)) == ["Soil", "Internode", "Plant", "Leaf"] Evaluated: ["Plant", "Internode", "Leaf", "Soil"] == ["Soil", "Internode", "Plant", "Leaf"] Stacktrace: [1] top-level scope @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:130 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2156 [inlined] [3] macro expansion @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:133 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:773 [inlined] ┌ Warning: Promoting `carbon_biomass` value taken from MTG node 4 (Internode) from Float64 to Float32: 1.0 (Float32) └ @ PlantSimEngine ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/initialisation.jl:128 ┌ Warning: Promoting `carbon_biomass` value taken from MTG node 5 (Leaf) from Float64 to Float32: 1.0 (Float32) └ @ PlantSimEngine ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/initialisation.jl:128 ┌ Warning: Promoting `carbon_biomass` value taken from MTG node 6 (Internode) from Float64 to Float32: 1.0 (Float32) └ @ PlantSimEngine ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/initialisation.jl:128 ┌ Warning: Promoting `carbon_biomass` value taken from MTG node 7 (Leaf) from Float64 to Float32: 1.0 (Float32) └ @ PlantSimEngine ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/initialisation.jl:128 Multiscale initialisations and outputs: Test Failed at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:173 Expression: collect(keys(organs_statuses)) == ["Soil", "Internode", "Plant", "Leaf"] Evaluated: ["Plant", "Internode", "Leaf", "Soil"] == ["Soil", "Internode", "Plant", "Leaf"] Stacktrace: [1] top-level scope @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:162 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2156 [inlined] [3] macro expansion @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:173 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:773 [inlined] Multiscale initialisations and outputs: Test Failed at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:198 Expression: collect(keys(statuses)) == ["Soil", "Internode", "Plant", "Leaf"] Evaluated: ["Plant", "Internode", "Leaf", "Soil"] == ["Soil", "Internode", "Plant", "Leaf"] Stacktrace: [1] top-level scope @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:162 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2156 [inlined] [3] macro expansion @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:198 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:773 [inlined] Multiscale initialisations and outputs: Test Failed at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:210 Expression: PlantSimEngine.pre_allocate_outputs(statuses, status_templates, reverse_multiscale_mapping, vars_need_init, outs, nsteps) Expected: "You requested outputs for organs Soil, Flowers, Leaf, but organs Flowers have no models." Message: "You requested outputs for organs Leaf, Flowers, Soil, but organs Flowers have no models." Stacktrace: [1] top-level scope @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:162 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2156 [inlined] [3] macro expansion @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:210 [inlined] Multiscale initialisations and outputs: Log Test Failed at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:213 Expression: PlantSimEngine.pre_allocate_outputs(statuses, status_templates, reverse_multiscale_mapping, vars_need_init, outs, nsteps, check = false) Log Pattern: (:info, "You requested outputs for organs Soil, Flowers, Leaf, but organs Flowers have no models.") (:info, "You requested outputs for variable non_existing_variable in organ Leaf, but it has no model.") Captured Logs: LogRecord(Info, "You requested outputs for organs Leaf, Flowers, Soil, but organs Flowers have no models.", PlantSimEngine, :save_results, :PlantSimEngine_c48e0fd1, "/home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/mtg/save_results.jl", 161, Base.Pairs{Symbol, Union{}, Nothing, @NamedTuple{}}()) LogRecord(Info, "You requested outputs for variable non_existing_variable in organ Leaf, but it has no model.", PlantSimEngine, :save_results, :PlantSimEngine_c48e0fd2, "/home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/mtg/save_results.jl", 184, Base.Pairs{Symbol, Union{}, Nothing, @NamedTuple{}}()) Stacktrace: [1] record(ts::Test.DefaultTestSet, t::Test.LogTestFailure) @ Test /opt/julia/share/julia/stdlib/v1.14/Test/src/logging.jl:166 [2] top-level scope @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:162 [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2156 [inlined] [4] macro expansion @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale.jl:213 [inlined] ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{ToySoilWaterModel{Vector{Float64}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{ToyCDemandModel{Float64}, Status{(:TT,), Tuple{Base.RefValue{Float64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 Issue in function #155 for node #3. Issue in function #155 for node #5. ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Process1Model, Process2Model, Process3Model, Status{(:var1, :var2), Tuple{Base.RefValue{Float64}, Base.RefValue{Float64}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Any, Any, Any, Vararg{Status{(:TT,), Tuple{Base.RefValue{Float64}}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 ┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead. │ caller = mapped_variables(mapping::Dict{String, Tuple{Any, MultiScaleModel{T, Vector{Pair{Union{Symbol, PreviousTimeStep}, Union{Pair{String, Symbol}, Vector{Pair{String, Symbol}}}}}} where T<:AbstractModel, Any, Vararg{Status{(:TT,), Tuple{Base.RefValue{Float64}}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28 └ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28 Cyclic dependency -> fixed with `PreviousTimeStep`: Test Failed at /source/usr/share/julia/stdlib/v1.14/Test/src/Test.jl:1266 Expression: contains_warn(read(fname, String), $(Expr(:escape, Test.var"#@test_nowarn##0#@test_nowarn##1"()))) Evaluated: contains_warn("┌ Warning: `merge(combine::Callable, d::AbstractDict, others::AbstractDict...)` is deprecated, use `mergewith(combine, d, others...)` instead.\n│ caller = mapped_variables(mapping::Dict{String, Tuple{Any, MultiScaleModel{T, Vector{Pair{Union{Symbol, PreviousTimeStep}, Union{Pair{String, Symbol}, Vector{Pair{String, Symbol}}}}}} where T<:AbstractModel, Any, Vararg{Status{(:TT,), Tuple{Base.RefValue{Float64}}}}}}, dependency_graph::PlantSimEngine.DependencyGraph{Dict{String, Any}, Any}; verbose::Bool) at compute_mapping.jl:28\n└ @ Core ~/.julia/packages/PlantSimEngine/AQ037/src/mtg/mapping/compute_mapping.jl:28\n", Test.var"#@test_nowarn##0#@test_nowarn##1"()) Stacktrace: [1] top-level scope @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale-cyclic-dep.jl:60 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2156 [inlined] [3] macro expansion @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale-cyclic-dep.jl:96 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:773 [inlined] ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 560 running 1 of 1 signal (10): User defined signal 1 unknown function (ip: 0x73922eb6e60d) at /lib/x86_64-linux-gnu/libc.so.6 malloc at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) posix_memalign at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) aligned_alloc at /workspace/srcdir/gcc-14.2.0/libstdc++-v3/libsupc++/new_opa.cc:78 [inlined] operator new at /workspace/srcdir/gcc-14.2.0/libstdc++-v3/libsupc++/new_opa.cc:149 operator new at /workspace/srcdir/gcc-14.2.0/libstdc++-v3/libsupc++/new_opant.cc:36 _ZN4llvm15allocate_bufferEmm at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm8DenseMapIPNS_3orc8JITDylibENS_8DenseSetINS1_15SymbolStringPtrENS_12DenseMapInfoIS5_vEEEENS6_IS3_vEENS_6detail12DenseMapPairIS3_S8_EEE4growEj at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm3orc23AsynchronousSymbolQuery18addQueryDependenceERNS0_8JITDylibENS0_15SymbolStringPtrE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm3orc16ExecutionSession17OL_completeLookupESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EESt10shared_ptrINS0_23AsynchronousSymbolQueryEESt8functionIFvRKNS_8DenseMapIPNS0_8JITDylibENS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISF_vEEEENSG_ISD_vEENS_6detail12DenseMapPairISD_SI_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm3orc25InProgressFullLookupState8completeESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm3orc16ExecutionSession19OL_applyQueryPhase1ESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EENS_5ErrorE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm3orc16ExecutionSession6lookupENS0_10LookupKindERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS8_EENS0_15SymbolLookupSetENS0_11SymbolStateENS_15unique_functionIFvNS_8ExpectedINS_8DenseMapINS0_15SymbolStringPtrENS0_17ExecutorSymbolDefENS_12DenseMapInfoISI_vEENS_6detail12DenseMapPairISI_SJ_EEEEEEEEESt8functionIFvRKNSH_IS6_NS_8DenseSetISI_SL_EENSK_IS6_vEENSN_IS6_SV_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) safelookup at /source/src/llvm-julia-task-dispatcher.h:432 findSymbols at /source/src/jitlayers.cpp:2179 jl_compile_codeinst_now at /source/src/jitlayers.cpp:728 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:879 jl_compile_method_internal at /source/src/gf.c:3648 _jl_invoke at /source/src/gf.c:4108 [inlined] ijl_apply_generic at /source/src/gf.c:4313 search_inputs_in_output at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/dependencies/soft_dependencies.jl:410 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 soft_dependencies_multiscale at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/dependencies/soft_dependencies.jl:151 unknown function (ip: 0x73920353b412) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 #dep#112 at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/dependencies/dependencies.jl:112 dep at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/dependencies/dependencies.jl:103 unknown function (ip: 0x7392041df9a2) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 macro expansion at /source/usr/share/julia/stdlib/v1.14/Test/src/Test.jl:1258 [inlined] macro expansion at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale-cyclic-dep.jl:217 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.14/Test/src/Test.jl:2156 [inlined] top-level scope at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale-cyclic-dep.jl:119 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_invoke at /source/src/gf.c:4123 ijl_eval_thunk at /source/src/toplevel.c:757 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:779 ijl_toplevel_eval_in at /source/src/toplevel.c:824 eval at ./boot.jl:489 include_string at ./loading.jl:3151 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _include at ./loading.jl:3211 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 unknown function (ip: 0x73921899cf12) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:765 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:779 ijl_toplevel_eval_in at /source/src/toplevel.c:824 eval at ./boot.jl:489 include_string at ./loading.jl:3151 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _include at ./loading.jl:3211 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_63286.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:765 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:779 ijl_toplevel_eval_in at /source/src/toplevel.c:824 eval at ./boot.jl:489 exec_options at ./client.jl:310 _start at ./client.jl:585 jfptr__start_69827.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x73922eafe249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== #= 123.0 ms =# precompile(Tuple{typeof(PlantSimEngine.drop_process), NamedTuple{(:carbon_biomass,), Tuple{Tuple{Float64}}}, Array{Symbol, 1}}) #= 58.3 ms =# precompile(Tuple{typeof(Base.structdiff), NamedTuple{(:carbon_biomass,), Tuple{Tuple{Float64}}}, Type{NamedTuple{(), T} where T<:Tuple}}) #= 53.7 ms =# precompile(Tuple{Type{Base.Iterators.Filter{F, I} where I where F}, PlantSimEngine.var"#soft_dependencies_multiscale##2#soft_dependencies_multiscale##3"{PlantSimEngine.SoftDependencyNode{PlantSimEngine.Examples.ToyLeafSurfaceModel{Float64}}}, Array{PlantSimEngine.HardDependencyNode{T} where T, 1}}) Mutiscale simulation -> cyclic dependency: ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361 Test FailedOverhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007392145fc010 Total snapshots: 12. Utilization: 100% ╎12 @Base/client.jl:585 _start() ╎ 12 @Base/client.jl:310 exec_options(opts::Base.JLOptions) ╎ 12 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ 12 @Base/Base.jl:311 (::Base.IncludeInto)(fname::String) ╎ 12 @Base/Base.jl:310 include(mapexpr::Function, mod::Module, _path::Stri… ╎ 12 @Base/loading.jl:3211 _include(mapexpr::Function, mod::Module, _path… ╎ ╎ 12 @Base/loading.jl:3151 include_string(mapexpr::typeof(identity), mod… ╎ ╎ 12 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ 12 @Base/Base.jl:311 (::Base.IncludeInto)(fname::String) ╎ ╎ 12 @Base/Base.jl:310 include(mapexpr::Function, mod::Module, _path:… ╎ ╎ 12 @Base/loading.jl:3211 _include(mapexpr::Function, mod::Module, … ╎ ╎ ╎ 12 @Base/loading.jl:3151 include_string(mapexpr::typeof(identity)… ╎ ╎ ╎ 12 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ ╎ 12 …ale-cyclic-dep.jl:119 top-level scope ╎ ╎ ╎ 12 @Test/src/Test.jl:2156 macro expansion ╎ ╎ ╎ 12 …le-cyclic-dep.jl:217 macro expansion ╎ ╎ ╎ ╎ 12 @Test/src/Test.jl:1258 macro expansion ╎ ╎ ╎ ╎ 12 @PlantSimEngine/…l:103 dep(mapping::Dict{String, Tuple{A… ╎ ╎ ╎ ╎ 12 @PlantSimEngine/…:112 dep(mapping::Dict{String, Tuple{A… 2╎ ╎ ╎ ╎ 7 @PlantSimEngine/…:154 soft_dependencies_multiscale(sof… ╎ ╎ ╎ ╎ 2 @Compiler/…er.jl:1724 typeinf_ext_toplevel(mi::Core.M… ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…er.jl:1715 typeinf_ext_toplevel ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…r.jl:1532 typeinf_ext(interp::Compiler.N… ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…n.jl:4568 typeinf(interp::Compiler.Nati… ╎ ╎ ╎ ╎ ╎ 1 @Compiler/….jl:4376 typeinf_local(interp::Compile… ╎ ╎ ╎ ╎ ╎ 1 @Compiler/….jl:3823 abstract_eval_basic_statement ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/….jl:3866 abstract_eval_basic_stateme… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…jl:3467 abstract_eval_statement_exp… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…jl:3103 abstract_eval_call ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:3085 abstract_call(interp::Comp… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:2925 abstract_call ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:2932 abstract_call(interp::Co… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:2821 abstract_call_known(int… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:55 argtypes_to_type(argtype… ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…n.jl:4575 typeinf(interp::Compiler.Nati… ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…r.jl:278 finish_nocycle(interp::Compil… ╎ ╎ ╎ ╎ ╎ 1 @Compiler/….jl:1022 optimize(interp::Compiler.Na… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/….jl:998 ipo_dataflow_analysis!(inter… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/….jl:287 scan!(callback::Compiler.Sc… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…jl:889 (::Compiler.ScanStmt)(inst:… 1╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…jl:650 _advance(stmt::Any, op::In… 3╎ ╎ ╎ ╎ 3 @PlantSimEngine/…:356 drop_process(proc_vars::@NamedT… 4╎ ╎ ╎ ╎ 5 @PlantSimEngine/…:156 soft_dependencies_multiscale(sof… ╎ ╎ ╎ ╎ 1 @Compiler/…er.jl:1724 typeinf_ext_toplevel(mi::Core.M… ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…er.jl:1715 typeinf_ext_toplevel ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…r.jl:1532 typeinf_ext(interp::Compiler.N… ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…n.jl:4575 typeinf(interp::Compiler.Nati… ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…r.jl:278 finish_nocycle(interp::Compil… ╎ ╎ ╎ ╎ ╎ 1 @Compiler/….jl:1021 optimize(interp::Compiler.Na… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/….jl:1048 run_passes_ipo_safe ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…jl:1035 run_passes_ipo_safe(ci::Cor… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…jl:1332 slot2reg 1╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…jl:337 domsort_ssa!(ir::Compiler.… at /source/usr/share/julia/stdlib/v1.14/Test/src/Test.jl:1266 Expression: contains_warn(read(fname, String), $(Expr(:escape, Test.var"#@test_nowarn##0#@test_nowarn##1"()))) Evaluated: contains_warn("\n======================================================================================\nInformation request received. A stacktrace will print followed by a 1.0 second profile.\n--trace-compile is enabled during profile collection.\n======================================================================================\n\ncmd: /opt/julia/bin/julia 560 running 1 of 1\n\nsignal (10): User defined signal 1\nunknown function (ip: 0x73922eb6e60d) at /lib/x86_64-linux-gnu/libc.so.6\nmalloc at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)\nposix_memalign at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)\naligned_alloc at /workspace/srcdir/gcc-14.2.0/libstdc++-v3/libsupc++/new_opa.cc:78 [inlined]\noperator new at /workspace/srcdir/gcc-14.2.0/libstdc++-v3/libsupc++/new_opa.cc:149\noperator new at /workspace/srcdir/gcc-14.2.0/libstdc++-v3/libsupc++/new_opant.cc:36\n_ZN4llvm15allocate_bufferEmm at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line)\n_ZN4llvm8DenseMapIPNS_3orc8JITDylibENS_8DenseSetINS1_15SymbolStringPtrENS_12DenseMapInfoIS5_vEEEENS6_IS3_vEENS_6detail12DenseMapPairIS3_S8_EEE4growEj at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line)\n_ZN4llvm3orc23AsynchronousSymbolQuery18addQueryDependenceERNS0_8JITDylibENS0_15SymbolStringPtrE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line)\n_ZN4llvm3orc16ExecutionSession17OL_completeLookupESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EESt10shared_ptrINS0_23AsynchronousSymbolQueryEESt8functionIFvRKNS_8DenseMapIPNS0_8JITDylibENS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISF_vEEEENSG_ISD_vEENS_6detail12DenseMapPairISD_SI_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line)\n_ZN4llvm3orc25InProgressFullLookupState8completeESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line)\n_ZN4llvm3orc16ExecutionSession19OL_applyQueryPhase1ESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EENS_5ErrorE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line)\n_ZN4llvm3orc16ExecutionSession6lookupENS0_10LookupKindERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS8_EENS0_15SymbolLookupSetENS0_11SymbolStateENS_15unique_functionIFvNS_8ExpectedINS_8DenseMapINS0_15SymbolStringPtrENS0_17ExecutorSymbolDefENS_12DenseMapInfoISI_vEENS_6detail12DenseMapPairISI_SJ_EEEEEEEEESt8functionIFvRKNSH_IS6_NS_8DenseSetISI_SL_EENSK_IS6_vEENSN_IS6_SV_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line)\nsafelookup at /source/src/llvm-julia-task-dispatcher.h:432\nfindSymbols at /source/src/jitlayers.cpp:2179\njl_compile_codeinst_now at /source/src/jitlayers.cpp:728\njl_compile_codeinst_impl at /source/src/jitlayers.cpp:879\njl_compile_method_internal at /source/src/gf.c:3648\n_jl_invoke at /source/src/gf.c:4108 [inlined]\nijl_apply_generic at /source/src/gf.c:4313\nsearch_inputs_in_output at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/dependencies/soft_dependencies.jl:410\n_jl_invoke at /source/src/gf.c:4116 [inlined]\nijl_apply_generic at /source/src/gf.c:4313\nsoft_dependencies_multiscale at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/dependencies/soft_dependencies.jl:151\nunknown function (ip: 0x73920353b412) at (unknown file)\n_jl_invoke at /source/src/gf.c:4116 [inlined]\nijl_apply_generic at /source/src/gf.c:4313\n#dep#112 at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/dependencies/dependencies.jl:112\ndep at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/src/dependencies/dependencies.jl:103\nunknown function (ip: 0x7392041df9a2) at (unknown file)\n_jl_invoke at /source/src/gf.c:4116 [inlined]\nijl_apply_generic at /source/src/gf.c:4313\nmacro expansion at /source/usr/share/julia/stdlib/v1.14/Test/src/Test.jl:1258 [inlined]\nmacro expansion at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale-cyclic-dep.jl:217 [inlined]\nmacro expansion at /source/usr/share/julia/stdlib/v1.14/Test/src/Test.jl:2156 [inlined]\ntop-level scope at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale-cyclic-dep.jl:119\n_jl_invoke at /source/src/gf.c:4116 [inlined]\nijl_invoke at /source/src/gf.c:4123\nijl_eval_thunk at /source/src/toplevel.c:757\njl_toplevel_eval_flex at /source/src/toplevel.c:712\njl_eval_toplevel_stmts at /source/src/toplevel.c:602\njl_toplevel_eval_flex at /source/src/toplevel.c:684\nijl_toplevel_eval at /source/src/toplevel.c:779\nijl_toplevel_eval_in at /source/src/toplevel.c:824\neval at ./boot.jl:489\ninclude_string at ./loading.jl:3151\n_jl_invoke at /source/src/gf.c:4116 [inlined]\nijl_apply_generic at /source/src/gf.c:4313\n_include at ./loading.jl:3211\ninclude at ./Base.jl:310\nIncludeInto at ./Base.jl:311\nunknown function (ip: 0x73921899cf12) at (unknown file)\n_jl_invoke at /source/src/gf.c:4116 [inlined]\nijl_apply_generic at /source/src/gf.c:4313\njl_apply at /source/src/julia.h:2285 [inlined]\ndo_call at /source/src/interpreter.c:123\neval_value at /source/src/interpreter.c:243\neval_stmt_value at /source/src/interpreter.c:194 [inlined]\neval_body at /source/src/interpreter.c:693\neval_body at /source/src/interpreter.c:550\neval_body at /source/src/interpreter.c:558\neval_body at /source/src/interpreter.c:558\neval_body at /source/src/interpreter.c:558\neval_body at /source/src/interpreter.c:550\neval_body at /source/src/interpreter.c:558\neval_body at /source/src/interpreter.c:558\neval_body at /source/src/interpreter.c:558\njl_interpret_toplevel_thunk at /source/src/interpreter.c:884\nijl_eval_thunk at /source/src/toplevel.c:765\njl_toplevel_eval_flex at /source/src/toplevel.c:712\njl_eval_toplevel_stmts at /source/src/toplevel.c:602\njl_toplevel_eval_flex at /source/src/toplevel.c:684\nijl_toplevel_eval at /source/src/toplevel.c:779\nijl_toplevel_eval_in at /source/src/toplevel.c:824\neval at ./boot.jl:489\ninclude_string at ./loading.jl:3151\n_jl_invoke at /source/src/gf.c:4116 [inlined]\nijl_apply_generic at /source/src/gf.c:4313\n_include at ./loading.jl:3211\ninclude at ./Base.jl:310\nIncludeInto at ./Base.jl:311\njfptr_IncludeInto_63286.1 at /opt/julia/lib/julia/sys.so (unknown line)\n_jl_invoke at /source/src/gf.c:4116 [inlined]\nijl_apply_generic at /source/src/gf.c:4313\njl_apply at /source/src/julia.h:2285 [inlined]\ndo_call at /source/src/interpreter.c:123\neval_value at /source/src/interpreter.c:243\neval_stmt_value at /source/src/interpreter.c:194 [inlined]\neval_body at /source/src/interpreter.c:693\njl_interpret_toplevel_thunk at /source/src/interpreter.c:884\nijl_eval_thunk at /source/src/toplevel.c:765\njl_toplevel_eval_flex at /source/src/toplevel.c:712\njl_eval_toplevel_stmts at /source/src/toplevel.c:602\njl_toplevel_eval_flex at /source/src/toplevel.c:684\nijl_toplevel_eval at /source/src/toplevel.c:779\nijl_toplevel_eval_in at /source/src/toplevel.c:824\neval at ./boot.jl:489\nexec_options at ./client.jl:310\n_start at ./client.jl:585\njfptr__start_69827.1 at /opt/julia/lib/julia/sys.so (unknown line)\n_jl_invoke at /source/src/gf.c:4116 [inlined]\nijl_apply_generic at /source/src/gf.c:4313\njl_apply at /source/src/julia.h:2285 [inlined]\ntrue_main at /source/src/jlapi.c:971\njl_repl_entrypoint at /source/src/jlapi.c:1138\nmain at /source/cli/loader_exe.c:58\nunknown function (ip: 0x73922eafe249) at /lib/x86_64-linux-gnu/libc.so.6\n__libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)\nunknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S\nunknown function (ip: (nil)) at (unknown file)\n\n\n==============================================================\nProfile collected. A report will print at the next yield point.\nDisabling --trace-compile\n==============================================================\n\n#= 123.0 ms =# precompile(Tuple{typeof(PlantSimEngine.drop_process), NamedTuple{(:carbon_biomass,), Tuple{Tuple{Float64}}}, Array{Symbol, 1}})\n#= 58.3 ms =# precompile(Tuple{typeof(Base.structdiff), NamedTuple{(:carbon_biomass,), Tuple{Tuple{Float64}}}, Type{NamedTuple{(), T} where T<:Tuple}})\n#= 53.7 ms =# precompile(Tuple{Type{Base.Iterators.Filter{F, I} where I where F}, PlantSimEngine.var\"#soft_dependencies_multiscale##2#soft_dependencies_multiscale##3\"{PlantSimEngine.SoftDependencyNode{PlantSimEngine.Examples.ToyLeafSurfaceModel{Float64}}}, Array{PlantSimEngine.HardDependencyNode{T} where T, 1}})\n", Test.var"#@test_nowarn##0#@test_nowarn##1"()) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:773 [inlined] [2] macro expansion @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale-cyclic-dep.jl:217 [inlined] [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2156 [inlined] [4] top-level scope @ ~/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale-cyclic-dep.jl:119 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1246 wait_forever at ./task.jl:1168 jfptr_wait_forever_36034.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] start_task at /source/src/task.c:1275 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007d803e7d9000 Total snapshots: 470. Utilization: 0% ╎470 @Base/task.jl:1168 wait_forever() 469╎ 470 @Base/task.jl:1246 wait() [560] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/PlantSimEngine/AQ037/test/test-mtg-multiscale-cyclic-dep.jl:118 _Z28handleGuaranteedNonPoisonOpsIZN4llvm13mustTriggerUBEPKNS0_11InstructionERKNS0_15SmallPtrSetImplIPKNS0_5ValueEEEEUlS7_E_EbS3_RKT_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) unknown function (ip: 0x32f0452f) at (unknown file) unknown function (ip: (nil)) at (unknown file) Allocations: 636321127 (Pool: 636317008; Big: 4119); GC: 143 PkgEval terminated after 2725.52s: test duration exceeded the time limit