Package evaluation to test GenomicDiversity on Julia 1.14.0-DEV.1563 (14ca1abc72*) started at 2026-01-16T05:05:29.291 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 10.09s ################################################################################ # Installation # Installing GenomicDiversity... Resolving package versions... Installed libaom_jll ────────────────── v3.13.1+0 Installed Libuuid_jll ───────────────── v2.41.2+0 Installed libass_jll ────────────────── v0.17.4+0 Installed HarfBuzz_jll ──────────────── v8.5.1+0 Installed ImageIO ───────────────────── v0.6.9 Installed MosaicViews ───────────────── v0.3.4 Installed MultivariateStats ─────────── v0.10.3 Installed PolygonOps ────────────────── v0.1.2 Installed Bzip2_jll ─────────────────── v1.0.9+0 Installed MKL_jll ───────────────────── v2025.2.0+0 Installed InlineStrings ─────────────── v1.4.5 Installed Extents ───────────────────── v0.1.6 Installed Libtiff_jll ───────────────── v4.7.2+0 Installed Cairo_jll ─────────────────── v1.18.5+0 Installed OrderedCollections ────────── v1.8.1 Installed Graphite2_jll ─────────────── v1.3.15+0 Installed SentinelArrays ────────────── v1.4.9 Installed Fontconfig_jll ────────────── v2.17.1+0 Installed Giflib_jll ────────────────── v5.2.3+0 Installed NearestNeighbors ──────────── v0.4.26 Installed BSON ──────────────────────── v0.3.9 Installed Distances ─────────────────── v0.10.12 Installed FileIO ────────────────────── v1.17.1 Installed QuadGK ────────────────────── v2.11.2 Installed NaNMath ───────────────────── v1.1.3 Installed Graphics ──────────────────── v1.1.3 Installed Opus_jll ──────────────────── v1.6.0+0 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed WoodburyMatrices ──────────── v1.1.0 Installed AdaptivePredicates ────────── v1.2.0 Installed Ogg_jll ───────────────────── v1.3.6+0 Installed Tables ────────────────────── v1.12.1 Installed EnumX ─────────────────────── v1.0.5 Installed Xorg_libxcb_jll ───────────── v1.17.1+0 Installed Arpack ────────────────────── v0.5.4 Installed InverseFunctions ──────────── v0.1.17 Installed Reexport ──────────────────── v1.2.2 Installed LZO_jll ───────────────────── v2.10.3+0 Installed LERC_jll ──────────────────── v4.0.1+0 Installed Missings ──────────────────── v1.2.0 Installed TableTraits ───────────────── v1.0.1 Installed Preferences ───────────────── v1.5.1 Installed LLVMOpenMP_jll ────────────── v18.1.8+0 Installed Imath_jll ─────────────────── v3.2.2+0 Installed SortingAlgorithms ─────────── v1.2.2 Installed LaTeXStrings ──────────────── v1.4.0 Installed MappedArrays ──────────────── v0.4.3 Installed Crayons ───────────────────── v4.1.1 Installed Grisu ─────────────────────── v1.0.2 Installed RangeArrays ───────────────── v0.3.2 Installed Format ────────────────────── v1.3.7 Installed Inflate ───────────────────── v0.1.5 Installed CRlibm ────────────────────── v1.0.2 Installed MacroTools ────────────────── v0.5.16 Installed DataStructures ────────────── v0.19.3 Installed ColorBrewer ───────────────── v0.4.2 Installed URIs ──────────────────────── v1.6.1 Installed OpenEXR_jll ───────────────── v3.4.4+0 Installed Packing ───────────────────── v0.5.1 Installed AbstractTrees ─────────────── v0.4.5 Installed DelimitedFiles ────────────── v1.9.1 Installed FillArrays ────────────────── v1.15.0 Installed LazyModules ───────────────── v0.3.1 Installed oneTBB_jll ────────────────── v2022.0.0+1 Installed x264_jll ──────────────────── v10164.0.1+0 Installed UnicodeFun ────────────────── v0.4.1 Installed Cairo ─────────────────────── v1.1.1 Installed CodecZlib ─────────────────── v0.7.8 Installed StatsBase ─────────────────── v0.34.10 Installed Observables ───────────────── v0.5.5 Installed Xorg_libXau_jll ───────────── v1.0.13+0 Installed IntelOpenMP_jll ───────────── v2025.2.0+0 Installed DataValueInterfaces ───────── v1.0.0 Installed CairoMakie ────────────────── v0.15.8 Installed CEnum ─────────────────────── v0.5.0 Installed LoggingExtras ─────────────── v1.2.0 Installed Libffi_jll ────────────────── v3.4.7+0 Installed Pixman_jll ────────────────── v0.44.2+0 Installed Expat_jll ─────────────────── v2.7.3+0 Installed IrrationalConstants ───────── v0.2.6 Installed StructUtils ───────────────── v2.6.2 Installed libpng_jll ────────────────── v1.6.54+0 Installed NamedDims ─────────────────── v1.2.3 Installed isoband_jll ───────────────── v0.2.3+0 Installed Contour ───────────────────── v0.6.3 Installed SimpleTraits ──────────────── v0.9.5 Installed ColorVectorSpace ──────────── v0.11.0 Installed Makie ─────────────────────── v0.24.8 Installed ImageMetadata ─────────────── v0.9.10 Installed RoundingEmulator ──────────── v0.2.1 Installed HTTP ──────────────────────── v1.10.19 Installed StableRNGs ────────────────── v1.0.4 Installed BitFlags ──────────────────── v0.1.9 Installed libfdk_aac_jll ────────────── v2.0.4+0 Installed Interpolations ────────────── v0.16.2 Installed libsixel_jll ──────────────── v1.10.5+0 Installed MathTeXEngine ─────────────── v0.6.7 Installed libwebp_jll ───────────────── v1.6.0+0 Installed FFMPEG_jll ────────────────── v8.0.1+0 Installed SimpleBufferStream ────────── v1.2.0 Installed Scratch ───────────────────── v1.3.0 Installed ShaderAbstractions ────────── v0.5.0 Installed PooledArrays ──────────────── v1.4.3 Installed CRlibm_jll ────────────────── v1.0.1+0 Installed WorkerUtilities ───────────── v1.6.1 Installed PDMats ────────────────────── v0.11.37 Installed AxisArrays ────────────────── v0.4.8 Installed PNGFiles ──────────────────── v0.4.4 Installed ImageCore ─────────────────── v0.10.5 Installed DocStringExtensions ───────── v0.9.5 Installed TableOperations ───────────── v1.2.0 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed OpenBLASConsistentFPCSR_jll ─ v0.3.29+0 Installed FreeType ──────────────────── v4.1.1 Installed PkgVersion ────────────────── v0.3.3 Installed JpegTurbo ─────────────────── v0.1.6 Installed RelocatableFolders ────────── v1.0.1 Installed StackViews ────────────────── v0.1.2 Installed KernelDensity ─────────────── v0.6.10 Installed AliasTables ───────────────── v1.1.3 Installed ConcurrentUtilities ───────── v2.5.0 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed SIMD ──────────────────────── v3.7.2 Installed DataAPI ───────────────────── v1.16.0 Installed InvertedIndices ───────────── v1.3.1 Installed Netpbm ────────────────────── v1.1.1 Installed ImageAxes ─────────────────── v0.6.12 Installed StaticArrays ──────────────── v1.9.16 Installed Colors ────────────────────── v0.13.1 Installed StaticArraysCore ──────────── v1.4.4 Installed ComputePipeline ───────────── v0.1.6 Installed ColorSchemes ──────────────── v3.31.0 Installed Libglvnd_jll ──────────────── v1.7.1+1 Installed AbstractFFTs ──────────────── v1.5.0 Installed QOI ───────────────────────── v1.0.2 Installed ColorTypes ────────────────── v0.12.1 Installed AxisAlgorithms ────────────── v1.1.0 Installed Glib_jll ──────────────────── v2.86.2+0 Installed StringManipulation ────────── v0.4.2 Installed Requires ──────────────────── v1.3.1 Installed BaseDirs ──────────────────── v1.3.2 Installed LogExpFunctions ───────────── v0.3.29 Installed Rmath ─────────────────────── v0.9.0 Installed Parsers ───────────────────── v2.8.3 Installed FreeTypeAbstraction ───────── v0.10.8 Installed JSON ──────────────────────── v1.4.0 Installed PrettyTables ──────────────── v3.1.2 Installed Distributions ─────────────── v0.25.123 Installed Arpack_jll ────────────────── v3.5.2+0 Installed StatsFuns ─────────────────── v1.5.2 Installed FilePaths ─────────────────── v0.9.0 Installed Unitful ───────────────────── v1.27.0 Installed OpenEXR ───────────────────── v0.3.3 Installed GridLayoutBase ────────────── v0.11.2 Installed Xorg_libXdmcp_jll ─────────── v1.1.6+0 Installed DataFrames ────────────────── v1.8.1 Installed WeakRefStrings ────────────── v1.4.2 Installed CSV ───────────────────────── v0.10.15 Installed JLLWrappers ───────────────── v1.7.1 Installed XZ_jll ────────────────────── v5.8.2+0 Installed x265_jll ──────────────────── v4.1.0+0 Installed GeometryBasics ────────────── v0.5.10 Installed SignedDistanceFields ──────── v0.4.1 Installed Pango_jll ─────────────────── v1.57.0+0 Installed ExactPredicates ───────────── v2.2.9 Installed Xorg_xtrans_jll ───────────── v1.6.0+0 Installed IterTools ─────────────────── v1.10.0 Installed FilePathsBase ─────────────── v0.9.24 Installed DataDeps ──────────────────── v0.7.13 Installed TiffImages ────────────────── v0.11.6 Installed JpegTurbo_jll ─────────────── v3.1.4+0 Installed PaddedViews ───────────────── v0.5.12 Installed Adapt ─────────────────────── v4.4.0 Installed ConstructionBase ──────────── v1.6.0 Installed Libmount_jll ──────────────── v2.41.2+0 Installed HypergeometricFunctions ───── v0.3.28 Installed TriplotBase ───────────────── v0.1.0 Installed ExceptionUnwrapping ───────── v0.1.11 Installed TranscodingStreams ────────── v0.11.3 Installed Sixel ─────────────────────── v0.1.5 Installed Xorg_libX11_jll ───────────── v1.8.12+0 Installed Compat ────────────────────── v4.18.1 Installed PlotUtils ─────────────────── v1.4.4 Installed TensorCore ────────────────── v0.1.1 Installed ImageBase ─────────────────── v0.1.7 Installed Statistics ────────────────── v1.11.1 Installed EarCut_jll ────────────────── v2.2.4+0 Installed PrecompileTools ───────────── v1.3.3 Installed StatsAPI ──────────────────── v1.8.0 Installed Impute ────────────────────── v0.6.12 Installed StructArrays ──────────────── v0.7.2 Installed OffsetArrays ──────────────── v1.17.0 Installed MbedTLS ───────────────────── v1.1.9 Installed ProgressMeter ─────────────── v1.11.0 Installed OpenSSL ───────────────────── v1.6.1 Installed GenomicDiversity ──────────── v0.2.3 Installed WebP ──────────────────────── v0.1.3 Installed Animations ────────────────── v0.4.2 Installed GettextRuntime_jll ────────── v0.22.4+0 Installed Ratios ────────────────────── v0.4.5 Installed ChainRulesCore ────────────── v1.26.0 Installed FriBidi_jll ───────────────── v1.0.17+0 Installed LAME_jll ──────────────────── v3.100.3+0 Installed Xorg_libXrender_jll ───────── v0.9.12+0 Installed libvorbis_jll ─────────────── v1.3.8+0 Installed Isoband ───────────────────── v0.1.1 Installed PtrArrays ─────────────────── v1.3.0 Installed IntervalArithmetic ────────── v1.0.2 Installed SpecialFunctions ──────────── v2.6.1 Installed IntervalSets ──────────────── v0.7.13 Installed Showoff ───────────────────── v1.0.3 Installed FixedPointNumbers ─────────── v0.8.5 Installed FreeType2_jll ─────────────── v2.13.4+0 Installed FFTW ──────────────────────── v1.10.0 Installed FFTW_jll ──────────────────── v3.3.11+0 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed MbedTLS_jll ───────────────── v2.28.1010+0 Installed Automa ────────────────────── v1.1.0 Installed Xorg_libXext_jll ──────────── v1.3.7+0 Installed IndirectArrays ────────────── v1.0.0 Installed DelaunayTriangulation ─────── v1.6.6 Installing 56 artifacts Installed artifact isoband 25.7 KiB Installed artifact LZO 208.9 KiB Installed artifact Giflib 154.6 KiB Installed artifact LAME 292.5 KiB Installed artifact OpenEXR 1.4 MiB Installed artifact LERC 272.9 KiB Installed artifact JpegTurbo 1.4 MiB Installed artifact MbedTLS 2.2 MiB Installed artifact Bzip2 503.5 KiB Installed artifact Xorg_libXdmcp 67.7 KiB Installed artifact FFTW 2.2 MiB Installed artifact Opus 960.8 KiB Installed artifact HarfBuzz 1.7 MiB Installed artifact Xorg_libXext 699.9 KiB Installed artifact Xorg_libXau 36.6 KiB Installed artifact Libmount 6.5 MiB Installed artifact libfdk_aac 2.8 MiB Installed artifact Xorg_libxcb 2.1 MiB Installed artifact FriBidi 78.9 KiB Installed artifact Ogg 250.3 KiB Installed artifact Libiconv 1.9 MiB Installed artifact Libglvnd 833.5 KiB Installed artifact LLVMOpenMP 661.6 KiB Installed artifact x264 2.1 MiB Installed artifact Libffi 44.2 KiB Installed artifact Xorg_libXrender 435.9 KiB Installed artifact libaom 6.4 MiB Installed artifact EarCut 80.5 KiB Installed artifact x265 1.4 MiB Installed artifact Cairo 2.2 MiB Installed artifact Pango 2.0 MiB Installed artifact Arpack 138.3 KiB Installed artifact libwebp 2.6 MiB Installed artifact Expat 283.3 KiB Installed artifact libvorbis 271.0 KiB Installed artifact Imath 184.9 KiB Installed artifact Xorg_libX11 13.9 MiB Installed artifact Pixman 372.2 KiB Installed artifact OpenBLASConsistentFPCSR 9.9 MiB Installed artifact Libuuid 3.7 MiB Installed artifact XZ 1.5 MiB Installed artifact libpng 328.7 KiB Installed artifact libsixel 177.3 KiB Installed artifact Libtiff 2.3 MiB Installed artifact GettextRuntime 543.0 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact Rmath 121.9 KiB Installed artifact libass 427.8 KiB Installed artifact MakieAssets 24.9 MiB Installed artifact Graphite2 120.2 KiB Installed artifact CRlibm 169.5 KiB Installed artifact Xorg_xtrans 48.2 KiB Installed artifact FFMPEG 11.7 MiB Installed artifact FreeType2 1.5 MiB Installed artifact Glib 7.7 MiB Installed artifact Fontconfig 984.8 KiB Updating `~/.julia/environments/v1.14/Project.toml` [594eec9e] + GenomicDiversity v0.2.3 Updating `~/.julia/environments/v1.14/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.4.0 [35492f91] + AdaptivePredicates v1.2.0 [66dad0bd] + AliasTables v1.1.3 [27a7e980] + Animations v0.4.2 [7d9fca2a] + Arpack v0.5.4 [67c07d97] + Automa v1.1.0 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.8 [fbb218c0] + BSON v0.3.9 [18cc8868] + BaseDirs v1.3.2 [d1d4a3ce] + BitFlags v0.1.9 [fa961155] + CEnum v0.5.0 [96374032] + CRlibm v1.0.2 [336ed68f] + CSV v0.10.15 [159f3aea] + Cairo v1.1.1 [13f3f980] + CairoMakie v0.15.8 [d360d2e6] + ChainRulesCore v1.26.0 [944b1d66] + CodecZlib v0.7.8 [a2cac450] + ColorBrewer v0.4.2 [35d6a980] + ColorSchemes v3.31.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [34da2185] + Compat v4.18.1 [95dc2771] + ComputePipeline v0.1.6 [f0e56b4a] + ConcurrentUtilities v2.5.0 [187b0558] + ConstructionBase v1.6.0 [d38c429a] + Contour v0.6.3 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [124859b0] + DataDeps v0.7.13 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [927a84f5] + DelaunayTriangulation v1.6.6 [8bb1440f] + DelimitedFiles v1.9.1 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [429591f6] + ExactPredicates v2.2.9 [460bff9d] + ExceptionUnwrapping v0.1.11 [411431e0] + Extents v0.1.6 [7a1cc6ca] + FFTW v1.10.0 [5789e2e9] + FileIO v1.17.1 [8fc22ac5] + FilePaths v0.9.0 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.15.0 [53c48c17] + FixedPointNumbers v0.8.5 [1fa38f19] + Format v1.3.7 [b38be410] + FreeType v4.1.1 [663a7486] + FreeTypeAbstraction v0.10.8 [594eec9e] + GenomicDiversity v0.2.3 [5c1252a2] + GeometryBasics v0.5.10 [a2bd30eb] + Graphics v1.1.3 [3955a311] + GridLayoutBase v0.11.2 [42e2da0e] + Grisu v1.0.2 [cd3eb016] + HTTP v1.10.19 [34004b35] + HypergeometricFunctions v0.3.28 [2803e5a7] + ImageAxes v0.6.12 [c817782e] + ImageBase v0.1.7 [a09fc81d] + ImageCore v0.10.5 [82e4d734] + ImageIO v0.6.9 [bc367c6b] + ImageMetadata v0.9.10 ⌃ [f7bf1975] + Impute v0.6.12 [9b13fd28] + IndirectArrays v1.0.0 [d25df0c9] + Inflate v0.1.5 [842dd82b] + InlineStrings v1.4.5 [a98d9a8b] + Interpolations v0.16.2 [d1acc4aa] + IntervalArithmetic v1.0.2 [8197267c] + IntervalSets v0.7.13 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [f1662d9f] + Isoband v0.1.1 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v1.4.0 [b835a17e] + JpegTurbo v0.1.6 [5ab0869b] + KernelDensity v0.6.10 [b964fa9f] + LaTeXStrings v1.4.0 [8cdb02fc] + LazyModules v0.3.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [1914dd2f] + MacroTools v0.5.16 [ee78f7c6] + Makie v0.24.8 [dbb5928d] + MappedArrays v0.4.3 [0a4f8689] + MathTeXEngine v0.6.7 [739be429] + MbedTLS v1.1.9 [e1d29d7a] + Missings v1.2.0 [e94cdb99] + MosaicViews v0.3.4 [6f286f6a] + MultivariateStats v0.10.3 [77ba4419] + NaNMath v1.1.3 [356022a1] + NamedDims v1.2.3 [b8a86587] + NearestNeighbors v0.4.26 [f09324ee] + Netpbm v1.1.1 [510215fc] + Observables v0.5.5 [6fe1bfb0] + OffsetArrays v1.17.0 [52e1d378] + OpenEXR v0.3.3 [4d8831e6] + OpenSSL v1.6.1 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 [f57f5aa1] + PNGFiles v0.4.4 [19eb6ba3] + Packing v0.5.1 [5432bcbf] + PaddedViews v0.5.12 [69de0a69] + Parsers v2.8.3 [eebad327] + PkgVersion v0.3.3 [995b91a9] + PlotUtils v1.4.4 [647866c9] + PolygonOps v0.1.2 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [08abe8d2] + PrettyTables v3.1.2 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [4b34888f] + QOI v1.0.2 [1fd47b50] + QuadGK v2.11.2 [b3c3ace0] + RangeArrays v0.3.2 [c84ed2f1] + Ratios v0.4.5 [189a3867] + Reexport v1.2.2 [05181044] + RelocatableFolders v1.0.1 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [5eaf0fd0] + RoundingEmulator v0.2.1 [fdea26ae] + SIMD v3.7.2 [6c6a2e73] + Scratch v1.3.0 [91c51154] + SentinelArrays v1.4.9 [65257c39] + ShaderAbstractions v0.5.0 [992d4aef] + Showoff v1.0.3 [73760f76] + SignedDistanceFields v0.4.1 [777ac1f9] + SimpleBufferStream v1.2.0 [699a6c99] + SimpleTraits v0.9.5 [45858cf5] + Sixel v0.1.5 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [860ef19b] + StableRNGs v1.0.4 [cae243ae] + StackViews v0.1.2 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [892a3eda] + StringManipulation v0.4.2 [09ab397b] + StructArrays v0.7.2 [ec057cc2] + StructUtils v2.6.2 [ab02a1b2] + TableOperations v1.2.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [62fd8b95] + TensorCore v0.1.1 [731e570b] + TiffImages v0.11.6 [3bb67fe8] + TranscodingStreams v0.11.3 [981d1d27] + TriplotBase v0.1.0 [5c2747f8] + URIs v1.6.1 [1cfade01] + UnicodeFun v0.4.1 [1986cc42] + Unitful v1.27.0 [ea10d353] + WeakRefStrings v1.4.2 [e3aaa7dc] + WebP v0.1.3 [efce3f68] + WoodburyMatrices v1.1.0 [76eceee3] + WorkerUtilities v1.6.1 ⌅ [68821587] + Arpack_jll v3.5.2+0 [6e34b625] + Bzip2_jll v1.0.9+0 [4e9b3aee] + CRlibm_jll v1.0.1+0 [83423d85] + Cairo_jll v1.18.5+0 [5ae413db] + EarCut_jll v2.2.4+0 [2e619515] + Expat_jll v2.7.3+0 [b22a6f82] + FFMPEG_jll v8.0.1+0 [f5851436] + FFTW_jll v3.3.11+0 [a3f928ae] + Fontconfig_jll v2.17.1+0 [d7e528f0] + FreeType2_jll v2.13.4+0 [559328eb] + FriBidi_jll v1.0.17+0 [b0724c58] + GettextRuntime_jll v0.22.4+0 [59f7168a] + Giflib_jll v5.2.3+0 [7746bdde] + Glib_jll v2.86.2+0 [3b182d85] + Graphite2_jll v1.3.15+0 [2e76f6c2] + HarfBuzz_jll v8.5.1+0 [905a6f67] + Imath_jll v3.2.2+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [aacddb02] + JpegTurbo_jll v3.1.4+0 [c1c5ebd0] + LAME_jll v3.100.3+0 [88015f11] + LERC_jll v4.0.1+0 [1d63c593] + LLVMOpenMP_jll v18.1.8+0 [dd4b983a] + LZO_jll v2.10.3+0 ⌅ [e9f186c6] + Libffi_jll v3.4.7+0 [7e76a0d4] + Libglvnd_jll v1.7.1+1 [94ce4f54] + Libiconv_jll v1.18.0+0 [4b2f31a3] + Libmount_jll v2.41.2+0 [89763e89] + Libtiff_jll v4.7.2+0 [38a345b3] + Libuuid_jll v2.41.2+0 [856f044c] + MKL_jll v2025.2.0+0 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [e7412a2a] + Ogg_jll v1.3.6+0 [6cdc7f73] + OpenBLASConsistentFPCSR_jll v0.3.29+0 [18a262bb] + OpenEXR_jll v3.4.4+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [91d4177d] + Opus_jll v1.6.0+0 [36c8627f] + Pango_jll v1.57.0+0 ⌅ [30392449] + Pixman_jll v0.44.2+0 [f50d1b31] + Rmath_jll v0.5.1+0 [ffd25f8a] + XZ_jll v5.8.2+0 [4f6342f7] + Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0 [a3789734] + Xorg_libXdmcp_jll v1.1.6+0 [1082639a] + Xorg_libXext_jll v1.3.7+0 [ea2f1a96] + Xorg_libXrender_jll v0.9.12+0 [c7cfdc94] + Xorg_libxcb_jll v1.17.1+0 [c5fb5394] + Xorg_xtrans_jll v1.6.0+0 [9a68df92] + isoband_jll v0.2.3+0 [a4ae2306] + libaom_jll v3.13.1+0 [0ac62f75] + libass_jll v0.17.4+0 [f638f0a6] + libfdk_aac_jll v2.0.4+0 [b53b4c65] + libpng_jll v1.6.54+0 [075b6546] + libsixel_jll v1.10.5+0 [f27f6e37] + libvorbis_jll v1.3.8+0 [c5f90fcd] + libwebp_jll v1.6.0+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 ⌅ [1270edf5] + x264_jll v10164.0.1+0 [dfaa095f] + x265_jll v4.1.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [8bf52ea8] + CRC32c v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.18.0+0 [e37daf67] + LibGit2_jll v1.9.2+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.12.2 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 31.72s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4785.3 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. Precompiling package dependencies... Precompiling packages... 4533.7 ms ✓ MacroTools 1682.9 ms ✓ InlineStrings 858.4 ms ✓ Reexport 1045.3 ms ✓ MappedArrays 966.0 ms ✓ TensorCore 1214.4 ms ✓ ConstructionBase 2092.9 ms ✓ IrrationalConstants 873.9 ms ✓ DataValueInterfaces 906.7 ms ✓ StatsAPI 2433.4 ms ✓ Format 1091.1 ms ✓ Observables 992.0 ms ✓ RoundingEmulator 909.5 ms ✓ PolygonOps 1193.1 ms ✓ IterTools 1066.9 ms ✓ IntervalSets 926.5 ms ✓ CEnum 1094.6 ms ✓ Inflate 963.0 ms ✓ Contour 1342.1 ms ✓ TranscodingStreams 927.9 ms ✓ LaTeXStrings 1172.7 ms ✓ Statistics 1023.0 ms ✓ StaticArraysCore 966.1 ms ✓ StableRNGs 2869.5 ms ✓ AdaptivePredicates 881.7 ms ✓ PtrArrays 841.1 ms ✓ SimpleBufferStream 1242.1 ms ✓ Grisu 900.1 ms ✓ DataAPI 1065.7 ms ✓ URIs 663.7 ms ✓ InvertedIndices 961.4 ms ✓ LazyModules 990.6 ms ✓ InverseFunctions 916.8 ms ✓ BitFlags 1179.5 ms ✓ AbstractTrees 1027.8 ms ✓ AbstractFFTs 943.0 ms ✓ EnumX 999.7 ms ✓ WorkerUtilities 2083.6 ms ✓ FillArrays 1001.6 ms ✓ TriplotBase 904.7 ms ✓ IndirectArrays 1068.9 ms ✓ Extents 938.6 ms ✓ RangeArrays 1271.4 ms ✓ OrderedCollections 1144.0 ms ✓ DocStringExtensions 2082.7 ms ✓ BSON 4673.4 ms ✓ BaseDirs 1640.6 ms ✓ OffsetArrays 824.9 ms ✓ IteratorInterfaceExtensions 1806.4 ms ✓ Crayons 1058.6 ms ✓ DelimitedFiles 1048.8 ms ✓ NaNMath 1259.9 ms ✓ Requires 1833.0 ms ✓ ConcurrentUtilities 1872.9 ms ✓ PDMats 1487.2 ms ✓ WoodburyMatrices 939.2 ms ✓ Scratch 32645.9 ms ✓ Unitful 2038.2 ms ✓ SentinelArrays 1148.9 ms ✓ LoggingExtras 1520.1 ms ✓ StructUtils 1786.7 ms ✓ ProgressMeter 3294.9 ms ✓ UnicodeFun 1133.0 ms ✓ Compat 1187.0 ms ✓ Preferences 1745.4 ms ✓ ExceptionUnwrapping 4537.0 ms ✓ PkgVersion 3574.8 ms ✓ SimpleTraits 884.8 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 869.6 ms ✓ IntervalSets → IntervalSetsRandomExt 897.7 ms ✓ ConstructionBase → ConstructionBaseIntervalSetsExt 1068.2 ms ✓ CodecZlib 1589.0 ms ✓ SignedDistanceFields 1455.0 ms ✓ Statistics → SparseArraysExt 4146.6 ms ✓ FixedPointNumbers 2028.4 ms ✓ NamedDims 1485.0 ms ✓ Distances 824.1 ms ✓ IntervalSets → IntervalSetsStatisticsExt 1009.2 ms ✓ AliasTables 914.8 ms ✓ Showoff 1072.2 ms ✓ Missings 1039.5 ms ✓ PooledArrays 880.8 ms ✓ InverseFunctions → InverseFunctionsDatesExt 1856.5 ms ✓ InverseFunctions → InverseFunctionsTestExt 3683.0 ms ✓ OpenSSL 4237.1 ms ✓ AbstractFFTs → AbstractFFTsTestExt 1465.7 ms ✓ FillArrays → FillArraysSparseArraysExt 992.3 ms ✓ FillArrays → FillArraysStatisticsExt 3437.3 ms ✓ DataStructures 1478.8 ms ✓ LogExpFunctions 998.9 ms ✓ PaddedViews 824.1 ms ✓ StackViews 927.4 ms ✓ TableTraits 882.7 ms ✓ Ratios 1051.3 ms ✓ Adapt 9037.0 ms ✓ FileIO 1471.6 ms ✓ FillArrays → FillArraysPDMatsExt 1425.8 ms ✓ AxisAlgorithms 1134.8 ms ✓ RelocatableFolders 2016.9 ms ✓ Unitful → ConstructionBaseUnitfulExt 2178.6 ms ✓ Unitful → PrintfExt 1971.3 ms ✓ Unitful → InverseFunctionsUnitfulExt 2075.9 ms ✓ Unitful → NaNMathExt 928.8 ms ✓ Compat → CompatLinearAlgebraExt 1166.4 ms ✓ PrecompileTools 1456.0 ms ✓ JLLWrappers 1865.0 ms ✓ ComputePipeline 1625.2 ms ✓ AxisArrays 2718.1 ms ✓ ColorTypes 1242.0 ms ✓ NamedDims → AbstractFFTsExt 1586.5 ms ✓ Distances → DistancesSparseArraysExt 1282.7 ms ✓ SortingAlgorithms 2083.4 ms ✓ QuadGK 865.2 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 929.1 ms ✓ MosaicViews 1654.7 ms ✓ Tables 1028.2 ms ✓ Ratios → RatiosFixedPointNumbersExt 1079.6 ms ✓ Adapt → AdaptSparseArraysExt 718.5 ms ✓ OffsetArrays → OffsetArraysAdaptExt 2243.3 ms ✓ ChainRulesCore 1865.1 ms ✓ FilePathsBase 2575.2 ms ✓ StringManipulation 13089.9 ms ✓ SIMD 13393.2 ms ✓ StaticArrays 14122.3 ms ✓ Parsers 2059.8 ms ✓ Libffi_jll 1680.7 ms ✓ LZO_jll 1639.2 ms ✓ EarCut_jll 1560.1 ms ✓ Bzip2_jll 1452.3 ms ✓ OpenBLASConsistentFPCSR_jll 1664.3 ms ✓ isoband_jll 1715.8 ms ✓ XZ_jll 1505.1 ms ✓ Rmath_jll 1479.5 ms ✓ OpenSpecFun_jll 1235.1 ms ✓ Xorg_xtrans_jll 1507.8 ms ✓ Opus_jll 4900.8 ms ✓ IntelOpenMP_jll 1586.6 ms ✓ x265_jll 1468.3 ms ✓ libpng_jll 1380.2 ms ✓ CRlibm_jll 5070.9 ms ✓ oneTBB_jll 1507.6 ms ✓ Imath_jll 1951.8 ms ✓ Arpack_jll 1915.9 ms ✓ Libmount_jll 1791.4 ms ✓ libfdk_aac_jll 1938.6 ms ✓ Libuuid_jll 1995.6 ms ✓ FriBidi_jll 1699.4 ms ✓ LERC_jll 1617.7 ms ✓ Xorg_libXau_jll 1649.3 ms ✓ Ogg_jll 1697.0 ms ✓ FFTW_jll 1569.3 ms ✓ LAME_jll 1510.3 ms ✓ Graphite2_jll 1625.0 ms ✓ x264_jll 1535.5 ms ✓ LLVMOpenMP_jll 1523.8 ms ✓ Libiconv_jll 1876.2 ms ✓ MbedTLS_jll 1695.6 ms ✓ libaom_jll 1758.7 ms ✓ Xorg_libXdmcp_jll 1662.0 ms ✓ Giflib_jll 1674.7 ms ✓ Expat_jll 2032.3 ms ✓ JpegTurbo_jll 1645.5 ms ✓ ColorTypes → StyledStringsExt 7784.6 ms ✓ Colors 3608.5 ms ✓ ColorVectorSpace 4344.0 ms ✓ StatsBase 1696.2 ms ✓ StructArrays 1296.1 ms ✓ TableOperations 1499.3 ms ✓ StructUtils → StructUtilsTablesExt 1521.2 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 1284.8 ms ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 1254.6 ms ✓ NamedDims → ChainRulesCoreExt 1091.0 ms ✓ Distances → DistancesChainRulesCoreExt 3088.3 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 2730.4 ms ✓ FilePathsBase → FilePathsBaseTestExt 1068.4 ms ✓ FilePathsBase → FilePathsBaseMmapExt 1444.2 ms ✓ FilePaths 34210.2 ms ✓ PrettyTables 13285.6 ms ✓ Automa 1556.3 ms ✓ StaticArrays → StaticArraysStatisticsExt 1745.4 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1333.9 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1338.7 ms ✓ Adapt → AdaptStaticArraysExt 5863.4 ms ✓ JSON 1031.9 ms ✓ InlineStrings → ParsersExt 15449.4 ms ✓ GeometryBasics 1452.9 ms ✓ FreeType2_jll 1172.3 ms ✓ Isoband 1270.3 ms ✓ Rmath 3948.5 ms ✓ SpecialFunctions 1187.9 ms ✓ CRlibm  Downloading artifact: IntelOpenMP  Downloading artifact: oneTBB 21041.5 ms ✓ MKL_jll 1395.8 ms ✓ OpenEXR_jll 1473.6 ms ✓ Arpack 1262.8 ms ✓ libvorbis_jll 1371.3 ms ✓ Pixman_jll 1613.8 ms ✓ GettextRuntime_jll 2087.7 ms ✓ MbedTLS 1658.9 ms ✓ Xorg_libxcb_jll 1811.6 ms ✓ Libtiff_jll 1357.4 ms ✓ libsixel_jll 3970.5 ms ✓ QOI 32392.9 ms ✓ TiffImages 1219.6 ms ✓ Animations 1199.6 ms ✓ Graphics 21084.1 ms ✓ ImageCore 6476.9 ms ✓ ColorSchemes 1076.5 ms ✓ PDMats → StatsBaseExt 1002.0 ms ✓ StructArrays → StructArraysSparseArraysExt 831.0 ms ✓ StructArrays → StructArraysLinearAlgebraExt 761.1 ms ✓ StructArrays → StructArraysAdaptExt 1489.5 ms ✓ StructArrays → StructArraysStaticArraysExt 1062.4 ms ✓ FilePaths → FilePathsURIsExt 55131.2 ms ✓ DataFrames 5328.0 ms ✓ NearestNeighbors 3841.9 ms ✓ Interpolations 3320.4 ms ✓ ColorBrewer 2240.6 ms ✓ WeakRefStrings 2609.3 ms ✓ Packing 7588.3 ms ✓ GridLayoutBase 2727.9 ms ✓ ShaderAbstractions 1458.3 ms ✓ FreeType 1232.6 ms ✓ Fontconfig_jll 2839.5 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 1605.5 ms ✓ HypergeometricFunctions 981.7 ms ✓ ColorVectorSpace → SpecialFunctionsExt 3820.9 ms ✓ IntervalArithmetic 4872.7 ms ✓ FFTW 4254.4 ms ✓ OpenEXR 1567.9 ms ✓ Glib_jll 17704.6 ms ✓ HTTP 1865.0 ms ✓ Xorg_libX11_jll 3253.2 ms ✓ ImageBase 4730.1 ms ✓ PNGFiles 6163.7 ms ✓ Sixel 5169.8 ms ✓ JpegTurbo 14327.4 ms ✓ PlotUtils 3250.2 ms ✓ Interpolations → InterpolationsUnitfulExt 24714.9 ms ✓ CSV 5428.7 ms ✓ FreeTypeAbstraction 2915.2 ms ✓ StatsFuns 1679.3 ms ✓ IntervalArithmetic → IntervalArithmeticSparseArraysExt 1397.7 ms ✓ IntervalArithmetic → IntervalArithmeticLinearAlgebraExt 1106.6 ms ✓ IntervalArithmetic → IntervalArithmeticIntervalSetsExt 5411.6 ms ✓ DataDeps 5778.7 ms ✓ FileIO → HTTPExt 1250.9 ms ✓ Xorg_libXrender_jll 1427.9 ms ✓ Xorg_libXext_jll 5843.7 ms ✓ ImageAxes 24381.8 ms ✓ MathTeXEngine 3505.3 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 1051.8 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 8906.2 ms ✓ Distributions 6458.3 ms ✓ ExactPredicates 8116.6 ms ✓ Impute 2061.5 ms ✓ Cairo_jll 1922.1 ms ✓ Libglvnd_jll 3988.6 ms ✓ ImageMetadata 4299.3 ms ✓ Distributions → DistributionsTestExt 3210.8 ms ✓ Distributions → DistributionsChainRulesCoreExt 4261.8 ms ✓ MultivariateStats 10005.9 ms ✓ DelaunayTriangulation 1955.6 ms ✓ HarfBuzz_jll 2238.6 ms ✓ libwebp_jll 5262.0 ms ✓ Netpbm 4232.2 ms ✓ KernelDensity 1966.0 ms ✓ libass_jll 2039.7 ms ✓ Pango_jll 7780.6 ms ✓ WebP 1958.2 ms ✓ FFMPEG_jll 2980.5 ms ✓ Cairo 4329.1 ms ✓ ImageIO 326289.7 ms ✓ Makie 296223.1 ms ✓ CairoMakie 106616.0 ms ✓ GenomicDiversity 274 dependencies successfully precompiled in 1624 seconds. 42 already precompiled. 1 dependency had output during precompilation: ┌ MKL_jll │ Downloading artifact: IntelOpenMP │ Downloading artifact: oneTBB └ Precompilation completed after 1573.22s ################################################################################ # Testing # Testing GenomicDiversity Status `/tmp/jl_7IWxa2/Project.toml` [336ed68f] CSV v0.10.15 [13f3f980] CairoMakie v0.15.8 [a93c6f00] DataFrames v1.8.1 [8bb1440f] DelimitedFiles v1.9.1 [594eec9e] GenomicDiversity v0.2.3 ⌃ [f7bf1975] Impute v0.6.12 [6f286f6a] MultivariateStats v0.10.3 [8dfed614] Test v1.11.0 Status `/tmp/jl_7IWxa2/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [79e6a3ab] Adapt v4.4.0 [35492f91] AdaptivePredicates v1.2.0 [66dad0bd] AliasTables v1.1.3 [27a7e980] Animations v0.4.2 [7d9fca2a] Arpack v0.5.4 [67c07d97] Automa v1.1.0 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.8 [fbb218c0] BSON v0.3.9 [18cc8868] BaseDirs v1.3.2 [d1d4a3ce] BitFlags v0.1.9 [fa961155] CEnum v0.5.0 [96374032] CRlibm v1.0.2 [336ed68f] CSV v0.10.15 [159f3aea] Cairo v1.1.1 [13f3f980] CairoMakie v0.15.8 [d360d2e6] ChainRulesCore v1.26.0 [944b1d66] CodecZlib v0.7.8 [a2cac450] ColorBrewer v0.4.2 [35d6a980] ColorSchemes v3.31.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 [34da2185] Compat v4.18.1 [95dc2771] ComputePipeline v0.1.6 [f0e56b4a] ConcurrentUtilities v2.5.0 [187b0558] ConstructionBase v1.6.0 [d38c429a] Contour v0.6.3 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [124859b0] DataDeps v0.7.13 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [927a84f5] DelaunayTriangulation v1.6.6 [8bb1440f] DelimitedFiles v1.9.1 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.123 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.5 [429591f6] ExactPredicates v2.2.9 [460bff9d] ExceptionUnwrapping v0.1.11 [411431e0] Extents v0.1.6 [7a1cc6ca] FFTW v1.10.0 [5789e2e9] FileIO v1.17.1 [8fc22ac5] FilePaths v0.9.0 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.15.0 [53c48c17] FixedPointNumbers v0.8.5 [1fa38f19] Format v1.3.7 [b38be410] FreeType v4.1.1 [663a7486] FreeTypeAbstraction v0.10.8 [594eec9e] GenomicDiversity v0.2.3 [5c1252a2] GeometryBasics v0.5.10 [a2bd30eb] Graphics v1.1.3 [3955a311] GridLayoutBase v0.11.2 [42e2da0e] Grisu v1.0.2 [cd3eb016] HTTP v1.10.19 [34004b35] HypergeometricFunctions v0.3.28 [2803e5a7] ImageAxes v0.6.12 [c817782e] ImageBase v0.1.7 [a09fc81d] ImageCore v0.10.5 [82e4d734] ImageIO v0.6.9 [bc367c6b] ImageMetadata v0.9.10 ⌃ [f7bf1975] Impute v0.6.12 [9b13fd28] IndirectArrays v1.0.0 [d25df0c9] Inflate v0.1.5 [842dd82b] InlineStrings v1.4.5 [a98d9a8b] Interpolations v0.16.2 [d1acc4aa] IntervalArithmetic v1.0.2 [8197267c] IntervalSets v0.7.13 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [f1662d9f] Isoband v0.1.1 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.4.0 [b835a17e] JpegTurbo v0.1.6 [5ab0869b] KernelDensity v0.6.10 [b964fa9f] LaTeXStrings v1.4.0 [8cdb02fc] LazyModules v0.3.1 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 [1914dd2f] MacroTools v0.5.16 [ee78f7c6] Makie v0.24.8 [dbb5928d] MappedArrays v0.4.3 [0a4f8689] MathTeXEngine v0.6.7 [739be429] MbedTLS v1.1.9 [e1d29d7a] Missings v1.2.0 [e94cdb99] MosaicViews v0.3.4 [6f286f6a] MultivariateStats v0.10.3 [77ba4419] NaNMath v1.1.3 [356022a1] NamedDims v1.2.3 [b8a86587] NearestNeighbors v0.4.26 [f09324ee] Netpbm v1.1.1 [510215fc] Observables v0.5.5 [6fe1bfb0] OffsetArrays v1.17.0 [52e1d378] OpenEXR v0.3.3 [4d8831e6] OpenSSL v1.6.1 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.37 [f57f5aa1] 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JuliaSyntaxHighlighting v1.13.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.18.0+0 [e37daf67] LibGit2_jll v1.9.2+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests...  ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ======================================================================================  cmd: /opt/julia/bin/julia 1703 running 1 of 1  signal (10): User defined signal 1 #tarjan!#47 at ./../usr/share/julia/Compiler/src/ssair/tarjan.jl:122 tarjan! at ./../usr/share/julia/Compiler/src/ssair/tarjan.jl:91 [inlined] CFGReachability at ./../usr/share/julia/Compiler/src/ssair/tarjan.jl:49 get! at ./../usr/share/julia/Compiler/src/inferencestate.jl:181 [inlined] kill_edge! at ./../usr/share/julia/Compiler/src/ssair/irinterp.jl:119 [inlined] reprocess_instruction! at ./../usr/share/julia/Compiler/src/ssair/irinterp.jl:143 #220 at ./../usr/share/julia/Compiler/src/ssair/irinterp.jl:365 scan! at ./../usr/share/julia/Compiler/src/ssair/irinterp.jl:287 #ir_abstract_constant_propagation#216 at ./../usr/share/julia/Compiler/src/ssair/irinterp.jl:333 ir_abstract_constant_propagation at ./../usr/share/julia/Compiler/src/ssair/irinterp.jl:319 [inlined] semi_concrete_eval_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:1262 abstract_call_method_with_const_args at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:886 abstract_call_method_with_const_args at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:861 [inlined] handle1 at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:177 jfptr_handle1_85341.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 doworkloop at ./../usr/share/julia/Compiler/src/inferencestate.jl:1206 jfptr_doworkloop_73099.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 typeinf at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4559 typeinf_ext at ./../usr/share/julia/Compiler/src/typeinfer.jl:1532 typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1715 [inlined] typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1724 jfptr_typeinf_ext_toplevel_88941.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] jl_type_infer at /source/src/gf.c:463 jl_compile_method_internal at /source/src/gf.c:3636 _jl_invoke at /source/src/gf.c:4108 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _create_plot! at /home/pkgeval/.julia/packages/Makie/Vn16E/src/figureplotting.jl:417 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] jl_f__apply_iterate at /source/src/builtins.c:876 #mesh!#60 at /home/pkgeval/.julia/packages/Makie/Vn16E/src/recipes.jl:534 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] jl_f__apply_iterate at /source/src/builtins.c:876 mesh! at /home/pkgeval/.julia/packages/Makie/Vn16E/src/recipes.jl:532 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 plot! at /home/pkgeval/.julia/packages/Makie/Vn16E/src/basic_recipes/poly.jl:161 connect_plot! at /home/pkgeval/.julia/packages/Makie/Vn16E/src/compute-plots.jl:834 plot! at /home/pkgeval/.julia/packages/Makie/Vn16E/src/interfaces.jl:211 unknown function (ip: 0x70937295591a) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _create_plot! at /home/pkgeval/.julia/packages/Makie/Vn16E/src/figureplotting.jl:417 #poly!#73 at /home/pkgeval/.julia/packages/Makie/Vn16E/src/recipes.jl:534 [inlined] poly! at /home/pkgeval/.julia/packages/Makie/Vn16E/src/recipes.jl:532 [inlined] #initialize_block!#1745 at /home/pkgeval/.julia/packages/Makie/Vn16E/src/makielayout/blocks/axis.jl:196 initialize_block! at /home/pkgeval/.julia/packages/Makie/Vn16E/src/makielayout/blocks/axis.jl:154 unknown function (ip: 0x709373a15fa2) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] jl_f__apply_iterate at /source/src/builtins.c:876 #_block#1539 at /home/pkgeval/.julia/packages/Makie/Vn16E/src/makielayout/blocks.jl:405 _block at /home/pkgeval/.julia/packages/Makie/Vn16E/src/makielayout/blocks.jl:321 [inlined] #_block#1538 at /home/pkgeval/.julia/packages/Makie/Vn16E/src/makielayout/blocks.jl:266 [inlined] _block at /home/pkgeval/.julia/packages/Makie/Vn16E/src/makielayout/blocks.jl:265 unknown function (ip: 0x7093739fc1f3) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 #_block#1537 at /home/pkgeval/.julia/packages/Makie/Vn16E/src/makielayout/blocks.jl:260 _block at /home/pkgeval/.julia/packages/Makie/Vn16E/src/makielayout/blocks.jl:251 [inlined] #_#1536 at /home/pkgeval/.julia/packages/Makie/Vn16E/src/makielayout/blocks.jl:242 [inlined] Block at /home/pkgeval/.julia/packages/Makie/Vn16E/src/makielayout/blocks.jl:241 unknown function (ip: 0x7093739efb73) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_body at /source/src/interpreter.c:581 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:765 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:779 ijl_toplevel_eval_in at /source/src/toplevel.c:824 eval at ./boot.jl:489 include_string at ./loading.jl:3151 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _include at ./loading.jl:3211 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 unknown function (ip: 0x709384721262) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:765 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_eval_module_expr at /source/src/toplevel.c:263 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:665 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:779 ijl_toplevel_eval_in at /source/src/toplevel.c:824 eval at ./boot.jl:489 include_string at ./loading.jl:3151 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _include at ./loading.jl:3211 include at ./Base.jl:309 include_package_for_output at ./loading.jl:3309 jfptr_include_package_for_output_39840.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 ijl_eval_thunk at /source/src/toplevel.c:765 jl_toplevel_eval_flex at /source/src/toplevel.c:712 jl_eval_toplevel_stmts at /source/src/toplevel.c:602 jl_toplevel_eval_flex at /source/src/toplevel.c:684 ijl_toplevel_eval at /source/src/toplevel.c:779 ijl_toplevel_eval_in at /source/src/toplevel.c:824 eval at ./boot.jl:489 include_string at ./loading.jl:3151 include_string at ./loading.jl:3161 [inlined] exec_options at ./client.jl:342 _start at ./client.jl:585 jfptr__start_69827.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x70939a99d249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file)  #= 1430.3 ms =# precompile(Tuple{typeof(Makie.plot!), Makie.Plot{Makie.poly, Tuple{GeometryBasics.HyperRectangle{2, Int64}}}, Makie.Plot{Makie.mesh, Tuple{GeometryBasics.Mesh{2, Float64, GeometryBasics.NgonFace{3, GeometryBasics.OffsetInteger{-1, UInt32}}, (:position,), Tuple{Array{GeometryBasics.Point{2, Float64}, 1}}, Array{GeometryBasics.NgonFace{3, GeometryBasics.OffsetInteger{-1, UInt32}}, 1}}}}}) #= 33.7 ms =# precompile(Tuple{typeof(Base.setproperty!), Makie.Plot{Makie.mesh, Tuple{GeometryBasics.Mesh{2, Float64, GeometryBasics.NgonFace{3, GeometryBasics.OffsetInteger{-1, UInt32}}, (:position,), Tuple{Array{GeometryBasics.Point{2, Float64}, 1}}, Array{GeometryBasics.NgonFace{3, GeometryBasics.OffsetInteger{-1, UInt32}}, 1}}}}, Symbol, Makie.Attributes}) #= 63.3 ms =# precompile(Tuple{Type{ComputePipeline.TypedEdge{InputTuple, OutputTuple, F} where F where OutputTuple where InputTuple}, ComputePipeline.ComputeEdge{ComputePipeline.ComputeGraph}, ComputePipeline.InputFunctionWrapper{Makie.AttributeConvert{:space, :mesh}}, NamedTuple{(:space,), Tuple{Base.RefValue{Any}}}}) #= 20.9 ms =# precompile(Tuple{typeof(Base.all), Function, Tuple{Symbol}}) #= 21.6 ms =# precompile(Tuple{ComputePipeline.var"#TypedEdge##10#TypedEdge##11"{ComputePipeline.ComputeEdge{ComputePipeline.ComputeGraph}, Tuple{Symbol}}, Int64}) #= 12.1 ms =# precompile(Tuple{Type{ComputePipeline.TypedEdge{InputTuple, OutputTuple, F} where F where OutputTuple where InputTuple}, ComputePipeline.InputFunctionWrapper{Makie.AttributeConvert{:space, :mesh}}, NamedTuple{(:space,), Tuple{Base.RefValue{Any}}}, Array{Bool, 1}, Tuple{Base.RefValue{Symbol}}, Array{ComputePipeline.Computed, 1}}) #= 16.8 ms =# precompile(Tuple{typeof(Makie.is_space_compatible), Tuple{Symbol, Symbol}, Tuple{Symbol, Symbol}}) #= 16.2 ms =# precompile(Tuple{Makie.var"#handle_transformation!##0#handle_transformation!##1"{Makie.Plot{Makie.mesh, Tuple{GeometryBasics.Mesh{2, Float64, GeometryBasics.NgonFace{3, GeometryBasics.OffsetInteger{-1, UInt32}}, (:position,), Tuple{Array{GeometryBasics.Point{2, Float64}, 1}}, Array{GeometryBasics.NgonFace{3, GeometryBasics.OffsetInteger{-1, UInt32}}, 1}}}}}, StaticArraysCore.SArray{Tuple{4, 4}, Float64, 2, 16}}) #= 17.4 ms =# precompile(Tuple{Makie.var"#handle_transformation!##2#handle_transformation!##3"{Makie.Plot{Makie.mesh, Tuple{GeometryBasics.Mesh{2, Float64, GeometryBasics.NgonFace{3, GeometryBasics.OffsetInteger{-1, UInt32}}, (:position,), Tuple{Array{GeometryBasics.Point{2, Float64}, 1}}, Array{GeometryBasics.NgonFace{3, GeometryBasics.OffsetInteger{-1, UInt32}}, 1}}}}}, Function})  ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ==============================================================  ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1129 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1246 wait_forever at ./task.jl:1168 jfptr_wait_forever_36034.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] start_task at /source/src/task.c:1275 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007ada23bfc5b0 Total snapshots: 432. Utilization: 0% ╎432 @Base/task.jl:1168 wait_forever() 431╎ 432 @Base/task.jl:1246 wait() ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1246 wait_forever at ./task.jl:1168 jfptr_wait_forever_36034.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] start_task at /source/src/task.c:1275 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007d0e763d9000 Total snapshots: 474. Utilization: 0% ╎474 @Base/task.jl:1168 wait_forever() 473╎ 474 @Base/task.jl:1246 wait() [1129] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/GenomicDiversity/sognH/test/runtests.jl:1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1246 wait_forever at ./task.jl:1168 jfptr_wait_forever_36034.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] start_task at /source/src/task.c:1275 unknown function (ip: (nil)) at (unknown file) Allocations: 1740309 (Pool: 1740020; Big: 289); GC: 5 PkgEval terminated after 2742.13s: test duration exceeded the time limit