Package evaluation to test NewickTree on Julia 1.14.0-DEV.1555 (0c48c4942b*) started at 2026-01-13T18:57:01.989


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...
  Activating project at `~/.julia/environments/v1.14`

Set-up completed after 10.29s


################################################################################
# Installation
#

Installing NewickTree...
   Resolving package versions...
    Updating `~/.julia/environments/v1.14/Project.toml`
  [b0a14db8] + NewickTree v0.4.0
    Updating `~/.julia/environments/v1.14/Manifest.toml`
  [1520ce14] + AbstractTrees v0.4.5
  [b0a14db8] + NewickTree v0.4.0
  [aea7be01] + PrecompileTools v1.3.3
  [21216c6a] + Preferences v1.5.1
  [3cdcf5f2] + RecipesBase v1.3.4
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v1.0.0
  [9e88b42a] + Serialization v1.11.0
  [f489334b] + StyledStrings v1.13.0
  [fa267f1f] + TOML v1.0.3
  [8dfed614] + Test v1.11.0
  [4ec0a83e] + Unicode v1.11.0

Installation completed after 1.01s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...
Precompiling packages...
   8314.9 ms  ✓ NearestNeighbors
   4025.0 ms  ✓ Clustering
   2707.1 ms  ✓ NewickTree → ClusteringExt
  3 dependencies successfully precompiled in 16 seconds. 38 already precompiled.

Precompilation completed after 30.29s


################################################################################
# Testing
#

     Testing NewickTree
      Status `/tmp/jl_QbXWaY/Project.toml`
  [1520ce14] AbstractTrees v0.4.5
  [aaaa29a8] Clustering v0.15.8
  [b0a14db8] NewickTree v0.4.0
  [3cdcf5f2] RecipesBase v1.3.4
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_QbXWaY/Manifest.toml`
  [1520ce14] AbstractTrees v0.4.5
  [66dad0bd] AliasTables v1.1.3
  [aaaa29a8] Clustering v0.15.8
  [9a962f9c] DataAPI v1.16.0
  [864edb3b] DataStructures v0.19.3
  [b4f34e82] Distances v0.10.12
  [ffbed154] DocStringExtensions v0.9.5
  [92d709cd] IrrationalConstants v0.2.6
  [2ab3a3ac] LogExpFunctions v0.3.29
  [e1d29d7a] Missings v1.2.0
  [b8a86587] NearestNeighbors v0.4.26
  [b0a14db8] NewickTree v0.4.0
  [bac558e1] OrderedCollections v1.8.1
  [aea7be01] PrecompileTools v1.3.3
  [21216c6a] Preferences v1.5.1
  [43287f4e] PtrArrays v1.3.0
  [3cdcf5f2] RecipesBase v1.3.4
  [a2af1166] SortingAlgorithms v1.2.2
  [90137ffa] StaticArrays v1.9.16
  [1e83bf80] StaticArraysCore v1.4.4
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.8.0
  [2913bbd2] StatsBase v0.34.10
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.13.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v1.0.0
  [9e88b42a] Serialization v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [f489334b] StyledStrings v1.13.0
  [fa267f1f] TOML v1.0.3
  [8dfed614] Test v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [4536629a] OpenBLAS_jll v0.3.29+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [8e850b90] libblastrampoline_jll v5.15.0+0
     Testing Running tests...
ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("8e59a23b-d1ef-5b43-a010-76e7ae578401"), "StaticArraysStatisticsExt") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0)
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] __require_prelocked(pkg::Base.PkgId, env::Nothing)
    @ Base ./loading.jl:2873
  [3] _require_prelocked(uuidkey::Base.PkgId, env::Nothing)
    @ Base ./loading.jl:2725
  [4] _require_prelocked
    @ ./loading.jl:2719 [inlined]
  [5] run_extension_callbacks(extid::Base.ExtensionId)
    @ Base ./loading.jl:1771
  [6] run_extension_callbacks(pkgid::Base.PkgId)
    @ Base ./loading.jl:1808
  [7] run_package_callbacks(modkey::Base.PkgId)
    @ Base ./loading.jl:1624
  [8] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2733
  [9] macro expansion
    @ ./loading.jl:2653 [inlined]
 [10] macro expansion
    @ ./lock.jl:376 [inlined]
 [11] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2617
 [12] require
    @ ./loading.jl:2593 [inlined]
 [13] eval_import_path
    @ ./module.jl:36 [inlined]
 [14] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [15] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})
    @ Base ./module.jl:101
 [16] top-level scope
    @ ~/.julia/packages/NearestNeighbors/YW2TO/src/NearestNeighbors.jl:5
 [17] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [18] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3309
 [19] top-level scope
    @ stdin:5
 [20] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [21] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:3151
 [22] include_string
    @ ./loading.jl:3161 [inlined]
 [23] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:342
 [24] _start()
    @ Base ./client.jl:585
in expression starting at /home/pkgeval/.julia/packages/NearestNeighbors/YW2TO/src/NearestNeighbors.jl:1
in expression starting at stdin:5
ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("b8a86587-4115-5ab1-83bc-aa920d37bbce"), "NearestNeighbors") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0)
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2873
  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2725
  [4] macro expansion
    @ ./loading.jl:2653 [inlined]
  [5] macro expansion
    @ ./lock.jl:376 [inlined]
  [6] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2617
  [7] require
    @ ./loading.jl:2593 [inlined]
  [8] eval_import_path
    @ ./module.jl:36 [inlined]
  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [10] _eval_using
    @ ./module.jl:137 [inlined]
 [11] _eval_using(to::Module, path::Expr)
    @ Base ./module.jl:137
 [12] top-level scope
    @ ~/.julia/packages/Clustering/M6mjF/src/Clustering.jl:3
 [13] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3309
 [15] top-level scope
    @ stdin:5
 [16] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:3151
 [18] include_string
    @ ./loading.jl:3161 [inlined]
 [19] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:342
 [20] _start()
    @ Base ./client.jl:585
in expression starting at /home/pkgeval/.julia/packages/Clustering/M6mjF/src/Clustering.jl:1
in expression starting at stdin:5

  2 dependencies had output during precompilation:
┌ Clustering
│  [Output was shown above]
└  
┌ NearestNeighbors
│  ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("8e59a23b-d1ef-5b43-a010-76e7ae578401"), "StaticArraysStatisticsExt") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0)
│  Stacktrace:
│    [1] error(s::String)
│      @ Base ./error.jl:44
│    [2] __require_prelocked(pkg::Base.PkgId, env::Nothing)
│      @ Base ./loading.jl:2873
│    [3] _require_prelocked(uuidkey::Base.PkgId, env::Nothing)
│      @ Base ./loading.jl:2725
│    [4] _require_prelocked
│      @ ./loading.jl:2719 [inlined]
│    [5] run_extension_callbacks(extid::Base.ExtensionId)
│      @ Base ./loading.jl:1771
│    [6] run_extension_callbacks(pkgid::Base.PkgId)
│      @ Base ./loading.jl:1808
│    [7] run_package_callbacks(modkey::Base.PkgId)
│      @ Base ./loading.jl:1624
│    [8] _require_prelocked(uuidkey::Base.PkgId, env::String)
│      @ Base ./loading.jl:2733
│    [9] macro expansion
│      @ ./loading.jl:2653 [inlined]
│   [10] macro expansion
│      @ ./lock.jl:376 [inlined]
│   [11] __require(into::Module, mod::Symbol)
│      @ Base ./loading.jl:2617
│   [12] require
│      @ ./loading.jl:2593 [inlined]
│   [13] eval_import_path
│      @ ./module.jl:36 [inlined]
│   [14] eval_import_path_all(at::Module, path::Expr, keyword::String)
│      @ Base ./module.jl:60
│   [15] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})
│      @ Base ./module.jl:101
│   [16] top-level scope
│      @ ~/.julia/packages/NearestNeighbors/YW2TO/src/NearestNeighbors.jl:5
│   [17] include(mod::Module, _path::String)
│      @ Base ./Base.jl:309
│   [18] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
│      @ Base ./loading.jl:3309
│   [19] top-level scope
│      @ stdin:5
│   [20] eval(m::Module, e::Any)
│      @ Core ./boot.jl:489
│   [21] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
│      @ Base ./loading.jl:3151
│   [22] include_string
│      @ ./loading.jl:3161 [inlined]
│   [23] exec_options(opts::Base.JLOptions)
│      @ Base ./client.jl:342
│   [24] _start()
│      @ Base ./client.jl:585
│  in expression starting at /home/pkgeval/.julia/packages/NearestNeighbors/YW2TO/src/NearestNeighbors.jl:1
│  in expression starting at stdin:5
└  
┌ Warning: Clustering not available, skipping extension tests
└ @ Main ~/.julia/packages/NewickTree/DXhju/test/runtests.jl:70
Test Summary: | Pass  Total   Time
NewickTree    |   28     28  29.2s
     Testing NewickTree tests passed 

Testing completed after 35.24s

PkgEval succeeded after 88.82s