Package evaluation to test BioFindr on Julia 1.14.0-DEV.1555 (0c48c4942b*) started at 2026-01-14T05:50:18.589 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 11.26s ################################################################################ # Installation # Installing BioFindr... Resolving package versions... Installed ChunkCodecLibZstd ─────────── v1.0.0 Installed OpenSSH_jll ───────────────── v10.2.1+0 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed URIs ──────────────────────── v1.6.1 Installed MacroTools ────────────────── v0.5.16 Installed DataStructures ────────────── v0.19.3 Installed FillArrays ────────────────── v1.15.0 Installed JLD2 ──────────────────────── v0.6.3 Installed Adapt ─────────────────────── v4.4.0 Installed InlineStrings ─────────────── v1.4.5 Installed AbstractTrees ─────────────── v0.4.5 Installed MKL_jll ───────────────────── v2025.2.0+0 Installed HypergeometricFunctions ───── v0.3.28 Installed MetaGraphsNext ────────────── v0.7.5 Installed KernelDensity ─────────────── v0.6.10 Installed ArnoldiMethod ─────────────── v0.4.0 Installed oneTBB_jll ────────────────── v2022.0.0+1 Installed AliasTables ───────────────── v1.1.3 Installed CodecZlib ─────────────────── v0.7.8 Installed ConcurrentUtilities ───────── v2.5.0 Installed StatsBase ─────────────────── v0.34.10 Installed TranscodingStreams ────────── v0.11.3 Installed ScientificTypes ───────────── v3.1.2 Installed LiveServer ────────────────── v1.5.0 Installed ExceptionUnwrapping ───────── v0.1.11 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed HashArrayMappedTries ──────── v0.2.0 Installed Compat ────────────────────── v4.18.1 Installed OrderedCollections ────────── v1.8.1 Installed Git_LFS_jll ───────────────── v3.7.0+0 Installed DataAPI ───────────────────── v1.16.0 Installed Statistics ────────────────── v1.11.1 Installed IntelOpenMP_jll ───────────── v2025.2.0+0 Installed StatsAPI ──────────────────── v1.8.0 Installed DataValueInterfaces ───────── v1.0.0 Installed InvertedIndices ───────────── v1.3.1 Installed PrecompileTools ───────────── v1.3.3 Installed MIMEs ─────────────────────── v0.1.4 Installed MbedTLS ───────────────────── v1.1.9 Installed FileIO ────────────────────── v1.17.1 Installed OffsetArrays ──────────────── v1.17.0 Installed SentinelArrays ────────────── v1.4.9 Installed OpenSSL ───────────────────── v1.6.1 Installed MarkdownAST ───────────────── v0.1.2 Installed Expat_jll ─────────────────── v2.7.3+0 Installed StaticArraysCore ──────────── v1.4.4 Installed LoggingExtras ─────────────── v1.2.0 Installed StructUtils ───────────────── v2.6.1 Installed StaticArrays ──────────────── v1.9.16 Installed Documenter ────────────────── v1.16.1 Installed IrrationalConstants ───────── v0.2.6 Installed AbstractFFTs ──────────────── v1.5.0 Installed QuadGK ────────────────────── v2.11.2 Installed ChainRulesCore ────────────── v1.26.0 Installed LazilyInitializedFields ───── v1.3.0 Installed ColorTypes ────────────────── v0.12.1 Installed Ratios ────────────────────── v0.4.5 Installed AxisAlgorithms ────────────── v1.1.0 Installed StringManipulation ────────── v0.4.2 Installed SimpleTraits ──────────────── v0.9.5 Installed Requires ──────────────────── v1.3.1 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed HTTP ──────────────────────── v1.10.19 Installed Interpolations ────────────── v0.16.2 Installed LogExpFunctions ───────────── v0.3.29 Installed ChunkCodecLibZlib ─────────── v1.0.0 Installed Git_jll ───────────────────── v2.52.0+0 Installed BitFlags ──────────────────── v0.1.9 Installed JSON ──────────────────────── v1.3.0 Installed Parsers ───────────────────── v2.8.3 Installed PrettyTables ──────────────── v3.1.2 Installed Rmath ─────────────────────── v0.9.0 Installed ScopedValues ──────────────── v1.5.0 Installed Distributions ─────────────── v0.25.123 Installed WoodburyMatrices ──────────── v1.1.0 Installed IOCapture ─────────────────── v1.0.0 Installed StatsFuns ─────────────────── v1.5.2 Installed Tables ────────────────────── v1.12.1 Installed PtrArrays ─────────────────── v1.3.0 Installed Git ───────────────────────── v1.5.0 Installed SpecialFunctions ──────────── v2.6.1 Installed Reexport ──────────────────── v1.2.2 Installed Preferences ───────────────── v1.5.1 Installed DataFrames ────────────────── v1.8.1 Installed FixedPointNumbers ─────────── v0.8.5 Installed SimpleBufferStream ────────── v1.2.0 Installed Missings ──────────────────── v1.2.0 Installed ScientificTypesBase ───────── v3.0.0 Installed PooledArrays ──────────────── v1.4.3 Installed FFTW ──────────────────────── v1.10.0 Installed FFTW_jll ──────────────────── v3.3.11+0 Installed BioFindr ──────────────────── v1.0.5 Installed JLLWrappers ───────────────── v1.7.1 Installed RegistryInstances ─────────── v0.1.0 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed LaTeXStrings ──────────────── v1.4.0 Installed TableTraits ───────────────── v1.0.1 Installed PDMats ────────────────────── v0.11.37 Installed MbedTLS_jll ───────────────── v2.28.1010+0 Installed ChunkCodecCore ────────────── v1.0.1 Installed SortingAlgorithms ─────────── v1.2.2 Installed StatisticalTraits ─────────── v3.5.0 Installed Crayons ───────────────────── v4.1.1 Installed CategoricalArrays ─────────── v1.0.2 Installed Inflate ───────────────────── v0.1.5 Installed ANSIColoredPrinters ───────── v0.0.1 Installed DocStringExtensions ───────── v0.9.5 Installed Graphs ────────────────────── v1.13.3 Installing 9 artifacts Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact Expat 283.3 KiB Installed artifact FFTW 2.2 MiB Installed artifact MbedTLS 2.2 MiB Installed artifact Libiconv 1.9 MiB Installed artifact OpenSSH 4.3 MiB Installed artifact Git_LFS 9.6 MiB Installed artifact Git 49.3 MiB Updating `~/.julia/environments/v1.14/Project.toml` [77580646] + BioFindr v1.0.5 Updating `~/.julia/environments/v1.14/Manifest.toml` [a4c015fc] + ANSIColoredPrinters v0.0.1 [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [13072b0f] + AxisAlgorithms v1.1.0 [77580646] + BioFindr v1.0.5 [d1d4a3ce] + BitFlags v0.1.9 [324d7699] + CategoricalArrays v1.0.2 [d360d2e6] + ChainRulesCore v1.26.0 [0b6fb165] + ChunkCodecCore v1.0.1 [4c0bbee4] + ChunkCodecLibZlib v1.0.0 [55437552] + ChunkCodecLibZstd v1.0.0 [944b1d66] + CodecZlib v0.7.8 [3da002f7] + ColorTypes v0.12.1 [34da2185] + Compat v4.18.1 [f0e56b4a] + ConcurrentUtilities v2.5.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [e30172f5] + Documenter v1.16.1 [460bff9d] + ExceptionUnwrapping v0.1.11 [7a1cc6ca] + FFTW v1.10.0 [5789e2e9] + FileIO v1.17.1 [1a297f60] + FillArrays v1.15.0 [53c48c17] + FixedPointNumbers v0.8.5 [d7ba0133] + Git v1.5.0 [86223c79] + Graphs v1.13.3 [cd3eb016] + HTTP v1.10.19 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [b5f81e59] + IOCapture v1.0.0 [d25df0c9] + Inflate v0.1.5 [842dd82b] + InlineStrings v1.4.5 [a98d9a8b] + Interpolations v0.16.2 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [033835bb] + JLD2 v0.6.3 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v1.3.0 [5ab0869b] + KernelDensity v0.6.10 [b964fa9f] + LaTeXStrings v1.4.0 [0e77f7df] + LazilyInitializedFields v1.3.0 [16fef848] + LiveServer v1.5.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 ⌅ [6c6e2e6c] + MIMEs v0.1.4 [1914dd2f] + MacroTools v0.5.16 [d0879d2d] + MarkdownAST v0.1.2 [739be429] + MbedTLS v1.1.9 [fa8bd995] + MetaGraphsNext v0.7.5 [e1d29d7a] + Missings v1.2.0 [6fe1bfb0] + OffsetArrays v1.17.0 [4d8831e6] + OpenSSL v1.6.1 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 [69de0a69] + Parsers v2.8.3 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [08abe8d2] + PrettyTables v3.1.2 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [c84ed2f1] + Ratios v0.4.5 [189a3867] + Reexport v1.2.2 [2792f1a3] + RegistryInstances v0.1.0 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [321657f4] + ScientificTypes v3.1.2 [30f210dd] + ScientificTypesBase v3.0.0 [7e506255] + ScopedValues v1.5.0 [91c51154] + SentinelArrays v1.4.9 [777ac1f9] + SimpleBufferStream v1.2.0 [699a6c99] + SimpleTraits v0.9.5 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [64bff920] + StatisticalTraits v3.5.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [892a3eda] + StringManipulation v0.4.2 [ec057cc2] + StructUtils v2.6.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.6.1 [efce3f68] + WoodburyMatrices v1.1.0 [2e619515] + Expat_jll v2.7.3+0 [f5851436] + FFTW_jll v3.3.11+0 [020c3dae] + Git_LFS_jll v3.7.0+0 [f8c6e375] + Git_jll v2.52.0+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] + MKL_jll v2025.2.0+0 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [9bd350c2] + OpenSSH_jll v10.2.1+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.18.0+0 [e37daf67] + LibGit2_jll v1.9.2+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.12.2 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 15.52s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4990.4 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. Precompiling package dependencies... Precompiling packages... 4497.3 ms ✓ MacroTools 1756.3 ms ✓ InlineStrings 966.6 ms ✓ Reexport 2303.8 ms ✓ IrrationalConstants 883.6 ms ✓ DataValueInterfaces 979.0 ms ✓ StatsAPI 946.9 ms ✓ LazilyInitializedFields 1073.5 ms ✓ Inflate 1368.0 ms ✓ TranscodingStreams 910.9 ms ✓ LaTeXStrings 1010.0 ms ✓ ChunkCodecCore 1180.6 ms ✓ Statistics 1016.9 ms ✓ StaticArraysCore 887.1 ms ✓ PtrArrays 849.5 ms ✓ SimpleBufferStream 1178.3 ms ✓ ANSIColoredPrinters 967.3 ms ✓ DataAPI 1263.0 ms ✓ URIs 952.8 ms ✓ InvertedIndices 975.7 ms ✓ BitFlags 1194.3 ms ✓ AbstractTrees 1105.0 ms ✓ AbstractFFTs 2189.9 ms ✓ FillArrays 983.0 ms ✓ ScientificTypesBase 2934.5 ms ✓ MIMEs 1361.7 ms ✓ OrderedCollections 1016.8 ms ✓ HashArrayMappedTries 1147.2 ms ✓ DocStringExtensions 1707.3 ms ✓ OffsetArrays 844.2 ms ✓ IteratorInterfaceExtensions 1942.0 ms ✓ Crayons 931.8 ms ✓ IOCapture 1329.2 ms ✓ Requires 1822.0 ms ✓ ConcurrentUtilities 1922.0 ms ✓ PDMats 1478.2 ms ✓ WoodburyMatrices 2753.9 ms ✓ SentinelArrays 1494.4 ms ✓ LoggingExtras 1697.6 ms ✓ StructUtils 1251.0 ms ✓ Compat 1170.1 ms ✓ Preferences 1550.5 ms ✓ ExceptionUnwrapping 3321.7 ms ✓ SimpleTraits 5256.9 ms ✓ RegistryInstances 1006.3 ms ✓ CodecZlib 1044.0 ms ✓ ChunkCodecLibZlib 1172.2 ms ✓ ChunkCodecLibZstd 1400.5 ms ✓ Statistics → SparseArraysExt 4022.8 ms ✓ FixedPointNumbers 986.7 ms ✓ AliasTables 1034.2 ms ✓ Missings 1100.5 ms ✓ PooledArrays 4057.6 ms ✓ OpenSSL 1883.0 ms ✓ MarkdownAST 4440.5 ms ✓ AbstractFFTs → AbstractFFTsTestExt 1574.8 ms ✓ FillArrays → FillArraysSparseArraysExt 1007.4 ms ✓ FillArrays → FillArraysStatisticsExt 952.0 ms ✓ StatisticalTraits 3472.4 ms ✓ DataStructures 1025.8 ms ✓ ScopedValues 1630.1 ms ✓ LogExpFunctions 1106.4 ms ✓ TableTraits 1128.4 ms ✓ Ratios 1358.7 ms ✓ Adapt 9427.7 ms ✓ FileIO 1619.7 ms ✓ FillArrays → FillArraysPDMatsExt 1559.8 ms ✓ AxisAlgorithms 1002.0 ms ✓ Compat → CompatLinearAlgebraExt 975.2 ms ✓ PrecompileTools 1261.9 ms ✓ JLLWrappers 2831.8 ms ✓ ColorTypes 1114.0 ms ✓ SortingAlgorithms 2373.0 ms ✓ QuadGK 1791.4 ms ✓ Tables 948.7 ms ✓ Ratios → RatiosFixedPointNumbersExt 1312.4 ms ✓ Adapt → AdaptSparseArraysExt 897.2 ms ✓ OffsetArrays → OffsetArraysAdaptExt 2732.6 ms ✓ ChainRulesCore 3178.9 ms ✓ CategoricalArrays 3269.0 ms ✓ StringManipulation 13748.9 ms ✓ StaticArrays 16302.5 ms ✓ Parsers 47968.4 ms ✓ JLD2 1503.6 ms ✓ Rmath_jll 1480.0 ms ✓ OpenSpecFun_jll 5088.8 ms ✓ IntelOpenMP_jll 4963.4 ms ✓ oneTBB_jll 1587.2 ms ✓ Git_LFS_jll 1429.8 ms ✓ FFTW_jll 1447.6 ms ✓ OpenSSH_jll 1389.5 ms ✓ Libiconv_jll 1409.8 ms ✓ MbedTLS_jll 1396.4 ms ✓ Expat_jll 1292.7 ms ✓ ColorTypes → StyledStringsExt 4312.9 ms ✓ StatsBase 900.8 ms ✓ StructUtils → StructUtilsTablesExt 1308.7 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 939.3 ms ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 3480.0 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 1072.3 ms ✓ CategoricalArrays → CategoricalArraysSentinelArraysExt 37922.5 ms ✓ PrettyTables 3928.0 ms ✓ ArnoldiMethod 1483.7 ms ✓ StaticArrays → StaticArraysStatisticsExt 1551.2 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1454.8 ms ✓ Adapt → AdaptStaticArraysExt 7462.5 ms ✓ JSON 1060.2 ms ✓ InlineStrings → ParsersExt 1527.8 ms ✓ Rmath 4924.6 ms ✓ SpecialFunctions  Downloading artifact: IntelOpenMP  Downloading artifact: oneTBB 10067.4 ms ✓ MKL_jll 2311.8 ms ✓ MbedTLS 1416.6 ms ✓ Git_jll 1444.6 ms ✓ PDMats → StatsBaseExt 1586.2 ms ✓ CategoricalArrays → CategoricalArraysStatsBaseExt 82158.7 ms ✓ DataFrames 10671.5 ms ✓ Graphs 4284.8 ms ✓ Interpolations 1165.0 ms ✓ CategoricalArrays → CategoricalArraysJSONExt 4058.2 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 2264.2 ms ✓ HypergeometricFunctions 6858.1 ms ✓ FFTW 24874.8 ms ✓ HTTP 976.6 ms ✓ Git 9358.3 ms ✓ MetaGraphsNext 3376.2 ms ✓ Graphs → GraphsSharedArraysExt 2983.3 ms ✓ StatsFuns 4628.6 ms ✓ LiveServer 7022.0 ms ✓ FileIO → HTTPExt 50145.2 ms ✓ Documenter 3649.2 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 10546.6 ms ✓ Distributions 3787.2 ms ✓ Distributions → DistributionsTestExt 3191.0 ms ✓ Distributions → DistributionsChainRulesCoreExt 6166.8 ms ✓ ScientificTypes 4017.4 ms ✓ KernelDensity 19707.1 ms ✓ BioFindr 136 dependencies successfully precompiled in 598 seconds. 41 already precompiled. 1 dependency had output during precompilation: ┌ MKL_jll │ Downloading artifact: IntelOpenMP │ Downloading artifact: oneTBB └ Precompilation completed after 612.21s ################################################################################ # Testing # Testing BioFindr Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_LbdRPt/Project.toml` [77580646] + BioFindr v1.0.5 [a93c6f00] ↑ DataFrames v1.6.1 ⇒ v1.8.1 [31c24e10] ↑ Distributions v0.25.107 ⇒ v0.25.123 [5ab0869b] ↑ KernelDensity v0.6.8 ⇒ v0.6.10 [321657f4] ↑ ScientificTypes v3.0.2 ⇒ v3.1.2 [276daf66] ↑ SpecialFunctions v2.3.1 ⇒ v2.6.1 [10745b16] ↑ Statistics v1.10.0 ⇒ v1.11.1 [2913bbd2] ↑ StatsBase v0.34.2 ⇒ v0.34.10 [de0858da] ~ Printf ⇒ v1.11.0 [9a3f8284] ~ Random ⇒ v1.11.0 [8dfed614] ~ Test ⇒ v1.11.0 Updating `/tmp/jl_LbdRPt/Manifest.toml` [a4c015fc] + ANSIColoredPrinters v0.0.1 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] ↑ Adapt v4.0.1 ⇒ v4.4.0 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [77580646] + BioFindr v1.0.5 [d1d4a3ce] + BitFlags v0.1.9 [49dc2e85] - Calculus v0.5.1 [324d7699] ↑ CategoricalArrays v0.10.8 ⇒ v1.0.2 [d360d2e6] ↑ ChainRulesCore v1.20.1 ⇒ v1.26.0 [0b6fb165] + ChunkCodecCore v1.0.1 [4c0bbee4] + ChunkCodecLibZlib v1.0.0 [55437552] + ChunkCodecLibZstd v1.0.0 [944b1d66] + CodecZlib v0.7.8 [3da002f7] ↑ ColorTypes v0.11.5 ⇒ v0.12.1 [34da2185] ↑ Compat v4.12.0 ⇒ v4.18.1 [f0e56b4a] + ConcurrentUtilities v2.5.0 [a93c6f00] ↑ DataFrames v1.6.1 ⇒ v1.8.1 [864edb3b] ↑ DataStructures v0.18.16 ⇒ v0.19.3 [31c24e10] ↑ Distributions v0.25.107 ⇒ v0.25.123 [ffbed154] ↑ DocStringExtensions v0.9.3 ⇒ v0.9.5 [e30172f5] + Documenter v1.16.1 [fa6b7ba4] - DualNumbers v0.6.8 [460bff9d] + ExceptionUnwrapping v0.1.11 [7a1cc6ca] ↑ FFTW v1.8.0 ⇒ v1.10.0 [5789e2e9] + FileIO v1.17.1 [1a297f60] ↑ FillArrays v1.9.3 ⇒ v1.15.0 [d7ba0133] + Git v1.5.0 [86223c79] + Graphs v1.13.3 [cd3eb016] + HTTP v1.10.19 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] ↑ HypergeometricFunctions v0.3.23 ⇒ v0.3.28 [b5f81e59] + IOCapture v1.0.0 [d25df0c9] + Inflate v0.1.5 [842dd82b] ↑ InlineStrings v1.4.1 ⇒ v1.4.5 [a98d9a8b] ↑ Interpolations v0.15.1 ⇒ v0.16.2 [41ab1584] ↑ InvertedIndices v1.3.0 ⇒ v1.3.1 [92d709cd] ↑ IrrationalConstants v0.2.2 ⇒ v0.2.6 [033835bb] + JLD2 v0.6.3 [692b3bcd] ↑ JLLWrappers v1.5.0 ⇒ v1.7.1 [682c06a0] + JSON v1.3.0 [5ab0869b] ↑ KernelDensity v0.6.8 ⇒ v0.6.10 [b964fa9f] ↑ LaTeXStrings v1.3.1 ⇒ v1.4.0 [0e77f7df] + LazilyInitializedFields v1.3.0 [16fef848] + LiveServer v1.5.0 [2ab3a3ac] ↑ LogExpFunctions v0.3.26 ⇒ v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 ⌅ [6c6e2e6c] + MIMEs v0.1.4 [1914dd2f] + MacroTools v0.5.16 [d0879d2d] + MarkdownAST v0.1.2 [739be429] + MbedTLS v1.1.9 [fa8bd995] + MetaGraphsNext v0.7.5 [e1d29d7a] ↑ Missings v1.1.0 ⇒ v1.2.0 [77ba4419] - NaNMath v1.0.2 [6fe1bfb0] ↑ OffsetArrays v1.13.0 ⇒ v1.17.0 [4d8831e6] + OpenSSL v1.6.1 [bac558e1] ↑ OrderedCollections v1.6.3 ⇒ v1.8.1 [90014a1f] ↑ PDMats v0.11.31 ⇒ v0.11.37 [69de0a69] ↑ Parsers v2.8.1 ⇒ v2.8.3 [aea7be01] ↑ PrecompileTools v1.2.0 ⇒ v1.3.3 [21216c6a] ↑ Preferences v1.4.1 ⇒ v1.5.1 [08abe8d2] ↑ PrettyTables v2.3.2 ⇒ v3.1.2 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] ↑ QuadGK v2.9.4 ⇒ v2.11.2 [2792f1a3] + RegistryInstances v0.1.0 [ae029012] ↑ Requires v1.3.0 ⇒ v1.3.1 [79098fc4] ↑ Rmath v0.7.1 ⇒ v0.9.0 [321657f4] ↑ ScientificTypes v3.0.2 ⇒ v3.1.2 [7e506255] + ScopedValues v1.5.0 [91c51154] ↑ SentinelArrays v1.4.3 ⇒ v1.4.9 [777ac1f9] + SimpleBufferStream v1.2.0 [699a6c99] + SimpleTraits v0.9.5 [a2af1166] ↑ SortingAlgorithms v1.2.1 ⇒ v1.2.2 [276daf66] ↑ SpecialFunctions v2.3.1 ⇒ v2.6.1 [90137ffa] ↑ StaticArrays v1.9.2 ⇒ v1.9.16 [1e83bf80] ↑ StaticArraysCore v1.4.2 ⇒ v1.4.4 [64bff920] ↑ StatisticalTraits v3.4.0 ⇒ v3.5.0 [10745b16] ↑ Statistics v1.10.0 ⇒ v1.11.1 [82ae8749] ↑ StatsAPI v1.7.0 ⇒ v1.8.0 [2913bbd2] ↑ StatsBase v0.34.2 ⇒ v0.34.10 [4c63d2b9] ↑ StatsFuns v1.3.0 ⇒ v1.5.2 [892a3eda] ↑ StringManipulation v0.3.4 ⇒ v0.4.2 [ec057cc2] + StructUtils v2.6.1 [bd369af6] ↑ Tables v1.11.1 ⇒ v1.12.1 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.6.1 [efce3f68] ↑ WoodburyMatrices v1.0.0 ⇒ v1.1.0 [2e619515] + Expat_jll v2.7.3+0 [f5851436] ↑ FFTW_jll v3.3.10+0 ⇒ v3.3.11+0 [020c3dae] + Git_LFS_jll v3.7.0+0 [f8c6e375] + Git_jll v2.52.0+0 [1d5cc7b8] ↑ IntelOpenMP_jll v2024.0.2+0 ⇒ v2025.2.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] ↑ MKL_jll v2024.0.0+0 ⇒ v2025.2.0+0 [c8ffd9c3] ↑ MbedTLS_jll v2.28.2+1 ⇒ v2.28.1010+0 [9bd350c2] + OpenSSH_jll v10.2.1+0 [efe28fd5] ↑ OpenSpecFun_jll v0.5.5+0 ⇒ v0.5.6+0 [f50d1b31] ↑ Rmath_jll v0.4.0+0 ⇒ v0.5.1+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] ↑ ArgTools v1.1.1 ⇒ v1.1.2 [56f22d72] ~ Artifacts ⇒ v1.11.0 [2a0f44e3] ~ Base64 ⇒ v1.11.0 [ade2ca70] ~ Dates ⇒ v1.11.0 [8ba89e20] ~ Distributed ⇒ v1.11.0 [f43a241f] ↑ Downloads v1.6.0 ⇒ v1.7.0 [7b1f6079] ~ FileWatching ⇒ v1.11.0 [9fa8497b] ~ Future ⇒ v1.11.0 [b77e0a4c] ~ InteractiveUtils ⇒ v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] ~ LazyArtifacts ⇒ v1.11.0 [b27032c2] ↑ LibCURL v0.6.4 ⇒ v1.0.0 [76f85450] ~ LibGit2 ⇒ v1.11.0 [8f399da3] ~ Libdl ⇒ v1.11.0 [37e2e46d] ~ LinearAlgebra ⇒ v1.13.0 [56ddb016] ~ Logging ⇒ v1.11.0 [d6f4376e] ~ Markdown ⇒ v1.11.0 [a63ad114] ~ Mmap ⇒ v1.11.0 [ca575930] ↑ NetworkOptions v1.2.0 ⇒ v1.3.0 [44cfe95a] ↑ Pkg v1.10.0 ⇒ v1.14.0 [de0858da] ~ Printf ⇒ v1.11.0 [3fa0cd96] ~ REPL ⇒ v1.11.0 [9a3f8284] ~ Random ⇒ v1.11.0 [ea8e919c] ↑ SHA v0.7.0 ⇒ v1.0.0 [9e88b42a] ~ Serialization ⇒ v1.11.0 [1a1011a3] ~ SharedArrays ⇒ v1.11.0 [6462fe0b] ~ Sockets ⇒ v1.11.0 [2f01184e] ↑ SparseArrays v1.10.0 ⇒ v1.13.0 [f489334b] + StyledStrings v1.13.0 [8dfed614] ~ Test ⇒ v1.11.0 [cf7118a7] ~ UUIDs ⇒ v1.11.0 [4ec0a83e] ~ Unicode ⇒ v1.11.0 [e66e0078] ↑ CompilerSupportLibraries_jll v1.0.5+1 ⇒ v1.3.0+1 [deac9b47] ↑ LibCURL_jll v8.4.0+0 ⇒ v8.18.0+0 [e37daf67] ↑ LibGit2_jll v1.6.4+0 ⇒ v1.9.2+0 [29816b5a] ↑ LibSSH2_jll v1.11.0+1 ⇒ v1.11.3+1 [14a3606d] ↑ MozillaCACerts_jll v2023.1.10 ⇒ v2025.12.2 [4536629a] ↑ OpenBLAS_jll v0.3.23+2 ⇒ v0.3.29+0 [05823500] ↑ OpenLibm_jll v0.8.1+2 ⇒ v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] ↑ SuiteSparse_jll v7.2.1+1 ⇒ v7.10.1+0 [83775a58] ↑ Zlib_jll v1.2.13+1 ⇒ v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] ↑ libblastrampoline_jll v5.8.0+1 ⇒ v5.15.0+0 [8e850ede] ↑ nghttp2_jll v1.52.0+1 ⇒ v1.68.0+1 [3f19e933] ↑ p7zip_jll v17.4.0+2 ⇒ v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_LbdRPt/Project.toml` [77580646] BioFindr v1.0.5 [a93c6f00] DataFrames v1.8.1 [31c24e10] Distributions v0.25.123 [5ab0869b] KernelDensity v0.6.10 [321657f4] ScientificTypes v3.1.2 [276daf66] SpecialFunctions v2.6.1 [10745b16] Statistics v1.11.1 [2913bbd2] StatsBase v0.34.10 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_LbdRPt/Manifest.toml` [a4c015fc] ANSIColoredPrinters v0.0.1 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [ec485272] ArnoldiMethod v0.4.0 [13072b0f] AxisAlgorithms v1.1.0 [77580646] BioFindr v1.0.5 [d1d4a3ce] BitFlags v0.1.9 [324d7699] CategoricalArrays v1.0.2 [d360d2e6] ChainRulesCore v1.26.0 [0b6fb165] ChunkCodecCore v1.0.1 [4c0bbee4] ChunkCodecLibZlib v1.0.0 [55437552] ChunkCodecLibZstd v1.0.0 [944b1d66] CodecZlib v0.7.8 [3da002f7] ColorTypes v0.12.1 [34da2185] Compat v4.18.1 [f0e56b4a] ConcurrentUtilities v2.5.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [31c24e10] Distributions v0.25.123 [ffbed154] DocStringExtensions v0.9.5 [e30172f5] Documenter v1.16.1 [460bff9d] ExceptionUnwrapping v0.1.11 [7a1cc6ca] FFTW v1.10.0 [5789e2e9] FileIO v1.17.1 [1a297f60] FillArrays v1.15.0 [53c48c17] FixedPointNumbers v0.8.5 [d7ba0133] Git v1.5.0 [86223c79] Graphs v1.13.3 [cd3eb016] HTTP v1.10.19 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [b5f81e59] IOCapture v1.0.0 [d25df0c9] Inflate v0.1.5 [842dd82b] InlineStrings v1.4.5 [a98d9a8b] Interpolations v0.16.2 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.6.3 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.3.0 [5ab0869b] KernelDensity v0.6.10 [b964fa9f] LaTeXStrings v1.4.0 [0e77f7df] LazilyInitializedFields v1.3.0 [16fef848] LiveServer v1.5.0 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 ⌅ [6c6e2e6c] MIMEs v0.1.4 [1914dd2f] MacroTools v0.5.16 [d0879d2d] MarkdownAST v0.1.2 [739be429] MbedTLS v1.1.9 [fa8bd995] MetaGraphsNext v0.7.5 [e1d29d7a] Missings v1.2.0 [6fe1bfb0] OffsetArrays v1.17.0 [4d8831e6] OpenSSL v1.6.1 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.37 [69de0a69] Parsers v2.8.3 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.1 [08abe8d2] PrettyTables v3.1.2 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [c84ed2f1] Ratios v0.4.5 [189a3867] Reexport v1.2.2 [2792f1a3] RegistryInstances v0.1.0 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [321657f4] ScientificTypes v3.1.2 [30f210dd] ScientificTypesBase v3.0.0 [7e506255] ScopedValues v1.5.0 [91c51154] SentinelArrays v1.4.9 [777ac1f9] SimpleBufferStream v1.2.0 [699a6c99] SimpleTraits v0.9.5 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.6.1 [90137ffa] StaticArrays v1.9.16 [1e83bf80] StaticArraysCore v1.4.4 [64bff920] StatisticalTraits v3.5.0 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.10 [4c63d2b9] StatsFuns v1.5.2 [892a3eda] StringManipulation v0.4.2 [ec057cc2] StructUtils v2.6.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [3bb67fe8] TranscodingStreams v0.11.3 [5c2747f8] URIs v1.6.1 [efce3f68] WoodburyMatrices v1.1.0 [2e619515] Expat_jll v2.7.3+0 [f5851436] FFTW_jll v3.3.11+0 [020c3dae] Git_LFS_jll v3.7.0+0 [f8c6e375] Git_jll v2.52.0+0 [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0 [94ce4f54] Libiconv_jll v1.18.0+0 [856f044c] MKL_jll v2025.2.0+0 [c8ffd9c3] MbedTLS_jll v2.28.1010+0 [9bd350c2] OpenSSH_jll v10.2.1+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [1317d2d5] oneTBB_jll v2022.0.0+1 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.18.0+0 [e37daf67] LibGit2_jll v1.9.2+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Test Summary: | Pass Total Time BioFindr.jl | 145 145 1m13.7s Testing BioFindr tests passed Testing completed after 596.3s PkgEval succeeded after 1273.13s