Package evaluation to test StorageGraphs on Julia 1.14.0-DEV.1475 (42ad41c179*) started at 2026-01-04T18:50:02.383 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 10.3s ################################################################################ # Installation # Installing StorageGraphs... Resolving package versions... Installed HDF5 ─ v0.13.6 Updating `~/.julia/environments/v1.14/Project.toml` [fa9e2bbc] + StorageGraphs v0.3.2 Updating `~/.julia/environments/v1.14/Manifest.toml` ⌅ [ec485272] + ArnoldiMethod v0.1.0 ⌅ [fbb218c0] + BSON v0.2.6 [a74b3585] + Blosc v0.7.3 ⌅ [3da002f7] + ColorTypes v0.10.12 ⌅ [5ae59095] + Colors v0.12.11 ⌅ [34da2185] + Compat v2.2.1 [a81c6b42] + Compose v0.9.6 ⌅ [864edb3b] + DataStructures v0.17.20 [8bb1440f] + DelimitedFiles v1.9.1 [5789e2e9] + FileIO v1.17.1 [53c48c17] + FixedPointNumbers v0.8.5 ⌅ [a2cc645c] + GraphPlot v0.4.4 ⌅ [f67ccb44] + HDF5 v0.13.6 [d25df0c9] + Inflate v0.1.5 [c8e1da08] + IterTools v1.10.0 ⌅ [4138dd39] + JLD v0.9.2 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 ⌅ [1b4a561d] + LegacyStrings v0.4.1 [093fc24a] + LightGraphs v1.3.5 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [442fdcdd] + Measures v0.3.3 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [699a6c99] + SimpleTraits v0.9.5 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [fa9e2bbc] + StorageGraphs v0.3.2 [0b7ba130] + Blosc_jll v1.21.7+0 ⌅ [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.2+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [5ced341a] + Lz4_jll v1.10.1+0 [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.9+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [477f73a3] + libaec_jll v1.1.4+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.17.0+0 [e37daf67] + LibGit2_jll v1.9.2+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.12.2 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building HDF5 → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/0713cbabdf855852dfab3ce6447c87145f3d9ea8/build.log` Installation completed after 16.46s ################################################################################ # Precompilation # ERROR: LoadError: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Nothing) The function `setindex!` exists, but no method is defined for this combination of argument types. Stacktrace: [1] top-level scope @ /PkgEval.jl/scripts/precompile.jl:10 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [4] _start() @ Base ./client.jl:585 in expression starting at /PkgEval.jl/scripts/precompile.jl:6 caused by: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Base.DevNull) The function `setindex!` exists, but no method is defined for this combination of argument types. Stacktrace: [1] top-level scope @ /PkgEval.jl/scripts/precompile.jl:7 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [4] _start() @ Base ./client.jl:585 Precompilation failed after 14.36s ################################################################################ # Testing # Testing StorageGraphs Status `/tmp/jl_p8zK7J/Project.toml` ⌅ [fbb218c0] BSON v0.2.6 ⌅ [a2cc645c] GraphPlot v0.4.4 ⌅ [4138dd39] JLD v0.9.2 [093fc24a] LightGraphs v1.3.5 [d96e819e] Parameters v0.12.3 [fa9e2bbc] StorageGraphs v0.3.2 [8ba89e20] Distributed v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_p8zK7J/Manifest.toml` ⌅ [ec485272] ArnoldiMethod v0.1.0 ⌅ [fbb218c0] BSON v0.2.6 [a74b3585] Blosc v0.7.3 ⌅ [3da002f7] ColorTypes v0.10.12 ⌅ [5ae59095] Colors v0.12.11 ⌅ [34da2185] Compat v2.2.1 [a81c6b42] Compose v0.9.6 ⌅ [864edb3b] DataStructures v0.17.20 [8bb1440f] DelimitedFiles v1.9.1 [5789e2e9] FileIO v1.17.1 [53c48c17] FixedPointNumbers v0.8.5 ⌅ [a2cc645c] GraphPlot v0.4.4 ⌅ [f67ccb44] HDF5 v0.13.6 [d25df0c9] Inflate v0.1.5 [c8e1da08] IterTools v1.10.0 ⌅ [4138dd39] JLD v0.9.2 [692b3bcd] JLLWrappers v1.7.1 ⌅ [682c06a0] JSON v0.21.4 ⌅ [1b4a561d] LegacyStrings v0.4.1 [093fc24a] LightGraphs v1.3.5 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 [442fdcdd] Measures v0.3.3 [bac558e1] OrderedCollections v1.8.1 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.1 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [699a6c99] SimpleTraits v0.9.5 [90137ffa] StaticArrays v1.9.16 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [fa9e2bbc] StorageGraphs v0.3.2 [3a884ed6] UnPack v1.0.2 [0b7ba130] Blosc_jll v1.21.7+0 ⌅ [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.2+0 [94ce4f54] Libiconv_jll v1.18.0+0 [5ced341a] Lz4_jll v1.10.1+0 [7cb0a576] MPICH_jll v4.3.2+0 [f1f71cc9] MPItrampoline_jll v5.5.4+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.9+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [a65dc6b1] Xorg_libpciaccess_jll v0.18.1+0 [477f73a3] libaec_jll v1.1.4+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.17.0+0 [e37daf67] LibGit2_jll v1.9.2+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("1b4a561d-cfcb-5daf-8433-43fcf8b4bea3"), "LegacyStrings") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2873  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2725  [4] macro expansion  @ ./loading.jl:2653 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2617  [7] require  @ ./loading.jl:2593 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})  @ Base ./module.jl:101  [11] top-level scope  @ ~/.julia/packages/JLD/uVJmd/src/JLD.jl:13  [12] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3309  [14] top-level scope  @ stdin:5  [15] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3151  [17] include_string  @ ./loading.jl:3161 [inlined]  [18] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [19] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/JLD/uVJmd/src/JLD.jl:3 in expression starting at stdin:5 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("4138dd39-2aa7-5051-a626-17a0bb65d9c8"), "JLD") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2873  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2725  [4] macro expansion  @ ./loading.jl:2653 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2617  [7] require  @ ./loading.jl:2593 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_using  @ ./module.jl:137 [inlined]  [11] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [12] top-level scope  @ ~/.julia/packages/StorageGraphs/QDEDh/src/persistence.jl:3  [13] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:310  [14] top-level scope  @ ~/.julia/packages/StorageGraphs/QDEDh/src/StorageGraphs.jl:66  [15] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [16] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3309  [17] top-level scope  @ stdin:5  [18] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3151  [20] include_string  @ ./loading.jl:3161 [inlined]  [21] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [22] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/StorageGraphs/QDEDh/src/persistence.jl:3 in expression starting at /home/pkgeval/.julia/packages/StorageGraphs/QDEDh/src/StorageGraphs.jl:1 in expression starting at stdin:5 2 dependencies had output during precompilation: ┌ StorageGraphs │ [Output was shown above] └ ┌ JLD │ ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("1b4a561d-cfcb-5daf-8433-43fcf8b4bea3"), "LegacyStrings") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0) │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:44 │ [2] __require_prelocked(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2873 │ [3] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2725 │ [4] macro expansion │ @ ./loading.jl:2653 [inlined] │ [5] macro expansion │ @ ./lock.jl:376 [inlined] │ [6] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2617 │ [7] require │ @ ./loading.jl:2593 [inlined] │ [8] eval_import_path │ @ ./module.jl:36 [inlined] │ [9] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [10] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr}) │ @ Base ./module.jl:101 │ [11] top-level scope │ @ ~/.julia/packages/JLD/uVJmd/src/JLD.jl:13 │ [12] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base ./loading.jl:3309 │ [14] top-level scope │ @ stdin:5 │ [15] eval(m::Module, e::Any) │ @ Core ./boot.jl:489 │ [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:3151 │ [17] include_string │ @ ./loading.jl:3161 [inlined] │ [18] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:342 │ [19] _start() │ @ Base ./client.jl:585 │ in expression starting at /home/pkgeval/.julia/packages/JLD/uVJmd/src/JLD.jl:3 │ in expression starting at stdin:5 └ ERROR: LoadError: The following 2 packages failed to precompile: StorageGraphs Failed to precompile StorageGraphs [fa9e2bbc-20aa-512b-a47b-5a4d8687aaeb] to "/home/pkgeval/.julia/compiled/v1.14/StorageGraphs/jl_TYApqt" (ProcessExited(1)). JLD Failed to precompile JLD [4138dd39-2aa7-5051-a626-17a0bb65d9c8] to "/home/pkgeval/.julia/compiled/v1.14/JLD/jl_VGBGQw" (ProcessExited(1)). in expression starting at /home/pkgeval/.julia/packages/StorageGraphs/QDEDh/test/runtests.jl:1 Testing failed after 44.37s ERROR: LoadError: Package StorageGraphs errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3067 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2916 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:237 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:585 in expression starting at /PkgEval.jl/scripts/evaluate.jl:228 PkgEval failed after 108.8s: package fails to precompile