Package evaluation to test StochasticGene on Julia 1.14.0-DEV.1420 (3d611fddcf*) started at 2025-12-31T00:22:23.687 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 6.38s ################################################################################ # Installation # Installing StochasticGene... Resolving package versions... Installed FastPower ─────────────────────────── v1.3.0 Installed MKL_jll ───────────────────────────── v2025.2.0+0 Installed SIMDTypes ─────────────────────────── v0.1.0 Installed OrderedCollections ────────────────── v1.8.1 Installed InlineStrings ─────────────────────── v1.4.5 Installed MultivariateStats ─────────────────── v0.10.3 Installed CommonWorldInvalidations ──────────── v1.0.0 Installed Optim ─────────────────────────────── v1.13.3 Installed OrdinaryDiffEqRosenbrock ──────────── v1.21.0 Installed OrdinaryDiffEqExponentialRK ───────── v1.11.0 Installed EnzymeCore ────────────────────────── v0.8.17 Installed CpuId ─────────────────────────────── v0.3.1 Installed OrdinaryDiffEqFIRK ────────────────── v1.19.0 Installed PreallocationTools ────────────────── v0.4.34 Installed NonlinearSolveSpectralMethods ─────── v1.6.0 Installed SentinelArrays ────────────────────── v1.4.9 Installed Compiler ──────────────────────────── v0.1.1 Installed NaNMath ───────────────────────────── v1.1.3 Installed QuadGK ────────────────────────────── v2.11.2 Installed OpenSpecFun_jll ───────────────────── v0.5.6+0 Installed LoweredCodeUtils ──────────────────── v3.5.0 Installed OrdinaryDiffEqQPRK ────────────────── v1.7.0 Installed StaticArrayInterface ──────────────── v1.8.0 Installed NonlinearSolveBase ────────────────── v2.9.0 Installed FastBroadcast ─────────────────────── v0.3.5 Installed Tables ────────────────────────────── v1.12.1 Installed LinearSolve ───────────────────────── v3.55.0 Installed Revise ────────────────────────────── v3.12.3 Installed Arpack ────────────────────────────── v0.5.4 Installed OrdinaryDiffEqLowOrderRK ──────────── v1.9.0 Installed BracketingNonlinearSolve ──────────── v1.6.1 Installed DiffEqBase ────────────────────────── v6.194.0 Installed InverseFunctions ──────────────────── v0.1.17 Installed Jieko ─────────────────────────────── v0.2.1 Installed EnumX ─────────────────────────────── v1.0.5 Installed NLSolversBase ─────────────────────── v7.10.0 Installed NonlinearSolve ────────────────────── v4.13.0 Installed Reexport ──────────────────────────── v1.2.2 Installed Missings ──────────────────────────── v1.2.0 Installed RegistryInstances ─────────────────── v0.1.0 Installed TableTraits ───────────────────────── v1.0.1 Installed Static ────────────────────────────── v1.3.1 Installed LaTeXStrings ──────────────────────── v1.4.0 Installed Preferences ───────────────────────── v1.5.1 Installed MaybeInplace ──────────────────────── v0.1.4 Installed SortingAlgorithms ─────────────────── v1.2.2 Installed OrdinaryDiffEqNordsieck ───────────── v1.7.0 Installed OrdinaryDiffEqAdamsBashforthMoulton ─ v1.8.0 Installed OrdinaryDiffEqLinear ──────────────── v1.9.0 Installed Crayons ───────────────────────────── v4.1.1 Installed UnPack ────────────────────────────── v1.0.2 Installed ADTypes ───────────────────────────── v1.21.0 Installed RecursiveArrayTools ───────────────── v3.42.1 Installed DataStructures ────────────────────── v0.19.3 Installed MacroTools ────────────────────────── v0.5.16 Installed OpenSSH_jll ───────────────────────── v10.2.1+0 Installed DiffResults ───────────────────────── v1.1.0 Installed FillArrays ────────────────────────── v1.15.0 Installed AbstractTrees ─────────────────────── v0.4.5 Installed GenericSchur ──────────────────────── v0.5.6 Installed DelimitedFiles ────────────────────── v1.9.1 Installed SparseMatrixColorings ─────────────── v0.4.23 Installed ManualMemory ──────────────────────── v0.1.8 Installed oneTBB_jll ────────────────────────── v2022.0.0+1 Installed DataValueInterfaces ───────────────── v1.0.0 Installed SciMLJacobianOperators ────────────── v0.1.12 Installed IntelOpenMP_jll ───────────────────── v2025.2.0+0 Installed CodecZlib ─────────────────────────── v0.7.8 Installed ExprTools ─────────────────────────── v0.1.10 Installed StatsBase ─────────────────────────── v0.34.9 Installed CommonSubexpressions ──────────────── v0.3.1 Installed ArrayInterface ────────────────────── v7.22.0 Installed LoggingExtras ─────────────────────── v1.2.0 Installed Expat_jll ─────────────────────────── v2.7.3+0 Installed IrrationalConstants ───────────────── v0.2.6 Installed LayoutPointers ────────────────────── v0.1.17 Installed ConcreteStructs ───────────────────── v0.2.3 Installed TruncatedStacktraces ──────────────── v1.4.0 Installed OrdinaryDiffEqRKN ─────────────────── v1.8.0 Installed GPUArraysCore ─────────────────────── v0.2.0 Installed OrdinaryDiffEqStabilizedIRK ───────── v1.9.0 Installed IOCapture ─────────────────────────── v1.0.0 Installed OrdinaryDiffEqExtrapolation ───────── v1.12.0 Installed ArrayLayouts ──────────────────────── v1.12.2 Installed LSODA_jll ─────────────────────────── v0.1.2+0 Installed PooledArrays ──────────────────────── v1.4.3 Installed OrdinaryDiffEqPRK ─────────────────── v1.7.0 Installed NonlinearSolveQuasiNewton ─────────── v1.12.0 Installed PDMats ────────────────────────────── v0.11.37 Installed WorkerUtilities ───────────────────── v1.6.1 Installed Setfield ──────────────────────────── v1.1.2 Installed DocStringExtensions ───────────────── v0.9.5 Installed OrdinaryDiffEqHighOrderRK ─────────── v1.8.0 Installed CompositionsBase ──────────────────── v0.1.2 Installed CommonSolve ───────────────────────── v0.2.6 Installed ForwardDiff ───────────────────────── v1.3.1 Installed Moshi ─────────────────────────────── v0.3.7 Installed Rmath_jll ─────────────────────────── v0.5.1+0 Installed VersionParsing ────────────────────── v1.3.0 Installed DifferentiationInterface ──────────── v0.7.13 Installed ZMQ ───────────────────────────────── v1.5.1 Installed AliasTables ───────────────────────── v1.1.3 Installed OrdinaryDiffEqStabilizedRK ────────── v1.7.0 Installed BitTwiddlingConvenienceFunctions ──── v0.1.6 Installed LineSearch ────────────────────────── v0.1.5 Installed IteratorInterfaceExtensions ───────── v1.0.0 Installed Krylov ────────────────────────────── v0.10.3 Installed RecipesBase ───────────────────────── v1.3.4 Installed FunctionWrappersWrappers ──────────── v0.1.3 Installed OrdinaryDiffEq ────────────────────── v6.105.0 Installed Git_LFS_jll ───────────────────────── v3.7.0+0 Installed DataAPI ───────────────────────────── v1.16.0 Installed InvertedIndices ───────────────────── v1.3.1 Installed SciMLOperators ────────────────────── v1.14.1 Installed OrdinaryDiffEqBDF ─────────────────── v1.13.0 Installed OrdinaryDiffEqSymplecticRK ────────── v1.10.0 Installed Conda ─────────────────────────────── v1.10.3 Installed SciMLStructures ───────────────────── v1.9.0 Installed FastGaussQuadrature ───────────────── v1.1.0 Installed StaticArrays ──────────────────────── v1.9.16 Installed StaticArraysCore ──────────────────── v1.4.4 Installed OrdinaryDiffEqLowStorageRK ────────── v1.10.0 Installed CodeTracking ──────────────────────── v3.0.0 Installed LSODA ─────────────────────────────── v0.7.5 Installed AbstractFFTs ──────────────────────── v1.5.0 Installed SciMLPublic ───────────────────────── v1.0.1 Installed StringManipulation ────────────────── v0.4.2 Installed Requires ──────────────────────────── v1.3.1 Installed FunctionWrappers ──────────────────── v1.1.3 Installed OrdinaryDiffEqDifferentiation ─────── v1.21.0 Installed Documenter ────────────────────────── v1.16.1 Installed DiffRules ─────────────────────────── v1.15.1 Installed LogExpFunctions ───────────────────── v0.3.29 Installed CSV ───────────────────────────────── v0.10.15 Installed JuliaInterpreter ──────────────────── v0.10.9 Installed OrdinaryDiffEqNonlinearSolve ──────── v1.18.0 Installed SciMLBase ─────────────────────────── v2.131.0 Installed PrettyTables ──────────────────────── v3.1.2 Installed OrdinaryDiffEqCore ────────────────── v2.3.0 Installed Git_jll ───────────────────────────── v2.52.0+0 Installed Parsers ───────────────────────────── v2.8.3 Installed JSON ──────────────────────────────── v0.21.4 Installed Distributions ─────────────────────── v0.25.122 Installed NonlinearSolveFirstOrder ──────────── v1.11.0 Installed Rmath ─────────────────────────────── v0.9.0 Installed Arpack_jll ────────────────────────── v3.5.2+0 Installed OrdinaryDiffEqExplicitRK ──────────── v1.7.0 Installed libsodium_jll ─────────────────────── v1.0.21+0 Installed FastClosures ──────────────────────── v0.3.2 Installed CloseOpenIntervals ────────────────── v0.1.13 Installed StatsFuns ─────────────────────────── v1.5.2 Installed FiniteDiff ────────────────────────── v2.29.0 Installed Polyester ─────────────────────────── v0.7.18 Installed OrdinaryDiffEqFeagin ──────────────── v1.7.0 Installed OrdinaryDiffEqIMEXMultistep ───────── v1.10.0 Installed WeakRefStrings ────────────────────── v1.4.2 Installed JLLWrappers ───────────────────────── v1.7.1 Installed IJulia ────────────────────────────── v1.33.0 Installed ZeroMQ_jll ────────────────────────── v4.3.6+0 Installed DataFrames ────────────────────────── v1.8.1 Installed OrdinaryDiffEqPDIRK ───────────────── v1.9.0 Installed OrdinaryDiffEqSSPRK ───────────────── v1.10.0 Installed OrdinaryDiffEqSDIRK ───────────────── v1.10.0 Installed ThreadingUtilities ────────────────── v0.5.5 Installed OrdinaryDiffEqDefault ─────────────── v1.11.0 Installed FilePathsBase ─────────────────────── v0.9.24 Installed Accessors ─────────────────────────── v0.1.43 Installed OrdinaryDiffEqVerner ──────────────── v1.9.0 Installed Adapt ─────────────────────────────── v4.4.0 Installed HypergeometricFunctions ───────────── v0.3.28 Installed ExponentialUtilities ──────────────── v1.29.0 Installed ConstructionBase ──────────────────── v1.6.0 Installed RuntimeGeneratedFunctions ─────────── v0.5.16 Installed SymbolicIndexingInterface ─────────── v0.3.46 Installed Compat ────────────────────────────── v4.18.1 Installed PositiveFactorizations ────────────── v0.2.4 Installed StrideArraysCore ──────────────────── v0.5.8 Installed Statistics ────────────────────────── v1.11.1 Installed TranscodingStreams ────────────────── v0.11.3 Installed LazyArrays ────────────────────────── v2.9.4 Installed PrecompileTools ───────────────────── v1.3.3 Installed StatsAPI ──────────────────────────── v1.8.0 Installed ExproniconLite ────────────────────── v0.10.14 Installed TimerOutputs ──────────────────────── v0.5.29 Installed MarkdownAST ───────────────────────── v0.1.2 Installed CPUSummary ────────────────────────── v0.2.7 Installed ChainRulesCore ────────────────────── v1.26.0 Installed IfElse ────────────────────────────── v0.1.1 Installed Parameters ────────────────────────── v0.12.3 Installed StochasticGene ────────────────────── v1.5.10 Installed ReTestItems ───────────────────────── v1.35.0 Installed LazilyInitializedFields ───────────── v1.3.0 Installed MuladdMacro ───────────────────────── v0.2.4 Installed SciMLLogging ──────────────────────── v1.8.0 Installed PtrArrays ─────────────────────────── v1.3.0 Installed Git ───────────────────────────────── v1.5.0 Installed SimpleNonlinearSolve ──────────────── v2.10.0 Installed SpecialFunctions ──────────────────── v2.6.1 Installed FFTW ──────────────────────────────── v1.10.0 Installed Libiconv_jll ──────────────────────── v1.18.0+0 Installed FFTW_jll ──────────────────────────── v3.3.11+0 Installed OrdinaryDiffEqTsit5 ───────────────── v1.8.0 Installed OrdinaryDiffEqFunctionMap ─────────── v1.8.0 Installed LineSearches ──────────────────────── v7.5.1 Installed ANSIColoredPrinters ───────────────── v0.0.1 Installed PolyesterWeave ────────────────────── v0.2.2 Installing 12 artifacts Installed artifact OpenSpecFun 194.9 KiB Installed artifact Rmath 121.9 KiB Installed artifact LSODA 24.9 KiB Installed artifact Arpack 138.3 KiB Installed artifact ZeroMQ 316.1 KiB Installed artifact libsodium 1.6 MiB Installed artifact Expat 283.3 KiB Installed artifact OpenSSH 4.3 MiB Installed artifact FFTW 2.2 MiB Installed artifact Libiconv 1.9 MiB Installed artifact Git_LFS 9.6 MiB Installed artifact Git 49.3 MiB Updating `~/.julia/environments/v1.14/Project.toml` [a2598c62] + StochasticGene v1.5.10 Updating `~/.julia/environments/v1.14/Manifest.toml` [47edcb42] + ADTypes v1.21.0 [a4c015fc] + ANSIColoredPrinters v0.0.1 [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.43 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [7d9fca2a] + Arpack v0.5.4 [4fba245c] + ArrayInterface v7.22.0 [4c555306] + ArrayLayouts v1.12.2 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] + BracketingNonlinearSolve v1.6.1 [2a0fbf3d] + CPUSummary v0.2.7 [336ed68f] + CSV v0.10.15 [d360d2e6] + ChainRulesCore v1.26.0 [fb6a15b2] + CloseOpenIntervals v0.1.13 [da1fd8a2] + CodeTracking v3.0.0 [944b1d66] + CodecZlib v0.7.8 [38540f10] + CommonSolve v0.2.6 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [807dbc54] + Compiler v0.1.1 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [8f4d0f93] + Conda v1.10.3 [187b0558] + ConstructionBase v1.6.0 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [2b5f629d] + DiffEqBase v6.194.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.13 [31c24e10] + Distributions v0.25.122 [ffbed154] + DocStringExtensions v0.9.5 [e30172f5] + Documenter v1.16.1 [4e289a0a] + EnumX v1.0.5 [f151be2c] + EnzymeCore v0.8.17 [d4d017d3] + ExponentialUtilities v1.29.0 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [7a1cc6ca] + FFTW v1.10.0 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [442a2c76] + FastGaussQuadrature v1.1.0 [a4df4552] + FastPower v1.3.0 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.15.0 [6a86dc24] + FiniteDiff v2.29.0 [f6369f11] + ForwardDiff v1.3.1 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [46192b85] + GPUArraysCore v0.2.0 [c145ed77] + GenericSchur v0.5.6 [d7ba0133] + Git v1.5.0 [34004b35] + HypergeometricFunctions v0.3.28 [7073ff75] + IJulia v1.33.0 [b5f81e59] + IOCapture v1.0.0 [615f187c] + IfElse v0.1.1 [842dd82b] + InlineStrings v1.4.5 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [ae98c720] + Jieko v0.2.1 [aa1ae85d] + JuliaInterpreter v0.10.9 [ba0b0d4f] + Krylov v0.10.3 [7f56f5a3] + LSODA v0.7.5 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 [0e77f7df] + LazilyInitializedFields v1.3.0 [5078a376] + LazyArrays v2.9.4 [87fe0de2] + LineSearch v0.1.5 [d3d80556] + LineSearches v7.5.1 [7ed4a6bd] + LinearSolve v3.55.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [6f1432cf] + LoweredCodeUtils v3.5.0 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [d0879d2d] + MarkdownAST v0.1.2 [bb5d69b7] + MaybeInplace v0.1.4 [e1d29d7a] + Missings v1.2.0 [2e0e35c7] + Moshi v0.3.7 [46d2c3a1] + MuladdMacro v0.2.4 [6f286f6a] + MultivariateStats v0.10.3 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [8913a72c] + NonlinearSolve v4.13.0 [be0214bd] + NonlinearSolveBase v2.9.0 [5959db7a] + NonlinearSolveFirstOrder v1.11.0 [9a2c21bd] + NonlinearSolveQuasiNewton v1.12.0 [26075421] + NonlinearSolveSpectralMethods v1.6.0 [429524aa] + Optim v1.13.3 [bac558e1] + OrderedCollections v1.8.1 [1dea7af3] + OrdinaryDiffEq v6.105.0 [89bda076] + OrdinaryDiffEqAdamsBashforthMoulton v1.8.0 [6ad6398a] + OrdinaryDiffEqBDF v1.13.0 [bbf590c4] + OrdinaryDiffEqCore v2.3.0 [50262376] + OrdinaryDiffEqDefault v1.11.0 [4302a76b] + OrdinaryDiffEqDifferentiation v1.21.0 [9286f039] + OrdinaryDiffEqExplicitRK v1.7.0 [e0540318] + OrdinaryDiffEqExponentialRK v1.11.0 [becaefa8] + OrdinaryDiffEqExtrapolation v1.12.0 [5960d6e9] + OrdinaryDiffEqFIRK v1.19.0 [101fe9f7] + OrdinaryDiffEqFeagin v1.7.0 [d3585ca7] + OrdinaryDiffEqFunctionMap v1.8.0 [d28bc4f8] + OrdinaryDiffEqHighOrderRK v1.8.0 [9f002381] + OrdinaryDiffEqIMEXMultistep v1.10.0 [521117fe] + OrdinaryDiffEqLinear v1.9.0 [1344f307] + OrdinaryDiffEqLowOrderRK v1.9.0 [b0944070] + OrdinaryDiffEqLowStorageRK v1.10.0 [127b3ac7] + OrdinaryDiffEqNonlinearSolve v1.18.0 [c9986a66] + OrdinaryDiffEqNordsieck v1.7.0 [5dd0a6cf] + OrdinaryDiffEqPDIRK v1.9.0 [5b33eab2] + OrdinaryDiffEqPRK v1.7.0 [04162be5] + OrdinaryDiffEqQPRK v1.7.0 [af6ede74] + OrdinaryDiffEqRKN v1.8.0 [43230ef6] + OrdinaryDiffEqRosenbrock v1.21.0 [2d112036] + OrdinaryDiffEqSDIRK v1.10.0 [669c94d9] + OrdinaryDiffEqSSPRK v1.10.0 [e3e12d00] + OrdinaryDiffEqStabilizedIRK v1.9.0 [358294b1] + OrdinaryDiffEqStabilizedRK v1.7.0 [fa646aed] + OrdinaryDiffEqSymplecticRK v1.10.0 [b1df2697] + OrdinaryDiffEqTsit5 v1.8.0 [79d7bb75] + OrdinaryDiffEqVerner v1.9.0 [90014a1f] + PDMats v0.11.37 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [f517fe37] + Polyester v0.7.18 [1d0040c9] + PolyesterWeave v0.2.2 [2dfb63ee] + PooledArrays v1.4.3 [85a6dd25] + PositiveFactorizations v0.2.4 ⌅ [d236fae5] + PreallocationTools v0.4.34 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [08abe8d2] + PrettyTables v3.1.2 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [817f1d60] + ReTestItems v1.35.0 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.42.1 [189a3867] + Reexport v1.2.2 [2792f1a3] + RegistryInstances v0.1.0 [ae029012] + Requires v1.3.1 [295af30f] + Revise v3.12.3 [79098fc4] + Rmath v0.9.0 [7e49a35a] + RuntimeGeneratedFunctions v0.5.16 [94e857df] + SIMDTypes v0.1.0 [0bca4576] + SciMLBase v2.131.0 [19f34311] + SciMLJacobianOperators v0.1.12 [a6db7da4] + SciMLLogging v1.8.0 [c0aeaf25] + SciMLOperators v1.14.1 [431bcebd] + SciMLPublic v1.0.1 [53ae85a6] + SciMLStructures v1.9.0 [91c51154] + SentinelArrays v1.4.9 [efcf1570] + Setfield v1.1.2 [727e6d20] + SimpleNonlinearSolve v2.10.0 [a2af1166] + SortingAlgorithms v1.2.2 [0a514795] + SparseMatrixColorings v0.4.23 [276daf66] + SpecialFunctions v2.6.1 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.9 [4c63d2b9] + StatsFuns v1.5.2 [a2598c62] + StochasticGene v1.5.10 [7792a7ef] + StrideArraysCore v0.5.8 [892a3eda] + StringManipulation v0.4.2 [2efcf032] + SymbolicIndexingInterface v0.3.46 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [1e6cf692] + TestEnv v1.103.0 [8290d209] + ThreadingUtilities v0.5.5 [a759f4b9] + TimerOutputs v0.5.29 [3bb67fe8] + TranscodingStreams v0.11.3 [781d530d] + TruncatedStacktraces v1.4.0 [3a884ed6] + UnPack v1.0.2 [81def892] + VersionParsing v1.3.0 [ea10d353] + WeakRefStrings v1.4.2 [76eceee3] + WorkerUtilities v1.6.1 [c2297ded] + ZMQ v1.5.1 ⌅ [68821587] + Arpack_jll v3.5.2+0 [2e619515] + Expat_jll v2.7.3+0 [f5851436] + FFTW_jll v3.3.11+0 [020c3dae] + Git_LFS_jll v3.7.0+0 [f8c6e375] + Git_jll v2.52.0+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [aae0fff6] + LSODA_jll v0.1.2+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] + MKL_jll v2025.2.0+0 [9bd350c2] + OpenSSH_jll v10.2.1+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [8f1865be] + ZeroMQ_jll v4.3.6+0 [a9144af2] + libsodium_jll v1.0.21+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.17.0+0 [e37daf67] + LibGit2_jll v1.9.2+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.12.2 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building Conda ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/8f06b0cfa4c514c7b9546756dbae91fcfbc92dc9/build.log` Building IJulia → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/13603b5774231264b3bb795ba1eb6a519f49fc21/build.log` Installation completed after 54.92s ################################################################################ # Precompilation # ERROR: LoadError: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Nothing) The function `setindex!` exists, but no method is defined for this combination of argument types. Stacktrace: [1] top-level scope @ /PkgEval.jl/scripts/precompile.jl:10 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [4] _start() @ Base ./client.jl:585 in expression starting at /PkgEval.jl/scripts/precompile.jl:6 caused by: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Base.DevNull) The function `setindex!` exists, but no method is defined for this combination of argument types. Stacktrace: [1] top-level scope @ /PkgEval.jl/scripts/precompile.jl:7 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [4] _start() @ Base ./client.jl:585 Precompilation failed after 11.75s ################################################################################ # Testing # Testing StochasticGene Status `/tmp/jl_WqyoKU/Project.toml` [336ed68f] CSV v0.10.15 [a93c6f00] DataFrames v1.8.1 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.122 [e30172f5] Documenter v1.16.1 [7a1cc6ca] FFTW v1.10.0 [7073ff75] IJulia v1.33.0 ⌅ [682c06a0] JSON v0.21.4 [7f56f5a3] LSODA v0.7.5 [6f286f6a] MultivariateStats v0.10.3 [429524aa] Optim v1.13.3 [1dea7af3] OrdinaryDiffEq v6.105.0 [295af30f] Revise v3.12.3 [10745b16] Statistics v1.11.1 [2913bbd2] StatsBase v0.34.9 [a2598c62] StochasticGene v1.5.10 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [37e2e46d] LinearAlgebra v1.13.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_WqyoKU/Manifest.toml` [47edcb42] ADTypes v1.21.0 [a4c015fc] ANSIColoredPrinters v0.0.1 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.43 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [7d9fca2a] Arpack v0.5.4 [4fba245c] ArrayInterface v7.22.0 [4c555306] ArrayLayouts v1.12.2 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] BracketingNonlinearSolve v1.6.1 [2a0fbf3d] CPUSummary v0.2.7 [336ed68f] CSV v0.10.15 [d360d2e6] ChainRulesCore v1.26.0 [fb6a15b2] CloseOpenIntervals v0.1.13 [da1fd8a2] CodeTracking v3.0.0 [944b1d66] CodecZlib v0.7.8 [38540f10] CommonSolve v0.2.6 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [807dbc54] Compiler v0.1.1 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [8f4d0f93] Conda v1.10.3 [187b0558] ConstructionBase v1.6.0 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [2b5f629d] DiffEqBase v6.194.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.13 [31c24e10] Distributions v0.25.122 [ffbed154] DocStringExtensions v0.9.5 [e30172f5] Documenter v1.16.1 [4e289a0a] EnumX v1.0.5 [f151be2c] EnzymeCore v0.8.17 [d4d017d3] ExponentialUtilities v1.29.0 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [7a1cc6ca] FFTW v1.10.0 [7034ab61] FastBroadcast v0.3.5 [9aa1b823] FastClosures v0.3.2 [442a2c76] FastGaussQuadrature v1.1.0 [a4df4552] FastPower v1.3.0 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.15.0 [6a86dc24] FiniteDiff v2.29.0 [f6369f11] ForwardDiff v1.3.1 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 [46192b85] GPUArraysCore v0.2.0 [c145ed77] GenericSchur v0.5.6 [d7ba0133] Git v1.5.0 [34004b35] HypergeometricFunctions v0.3.28 [7073ff75] IJulia v1.33.0 [b5f81e59] IOCapture v1.0.0 [615f187c] IfElse v0.1.1 [842dd82b] InlineStrings v1.4.5 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 ⌅ [682c06a0] JSON v0.21.4 [ae98c720] Jieko v0.2.1 [aa1ae85d] JuliaInterpreter v0.10.9 [ba0b0d4f] Krylov v0.10.3 [7f56f5a3] LSODA v0.7.5 [b964fa9f] LaTeXStrings v1.4.0 [10f19ff3] LayoutPointers v0.1.17 [0e77f7df] LazilyInitializedFields v1.3.0 [5078a376] LazyArrays v2.9.4 [87fe0de2] LineSearch v0.1.5 [d3d80556] LineSearches v7.5.1 [7ed4a6bd] LinearSolve v3.55.0 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 [6f1432cf] LoweredCodeUtils v3.5.0 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [d0879d2d] MarkdownAST v0.1.2 [bb5d69b7] MaybeInplace v0.1.4 [e1d29d7a] Missings v1.2.0 [2e0e35c7] Moshi v0.3.7 [46d2c3a1] MuladdMacro v0.2.4 [6f286f6a] MultivariateStats v0.10.3 [d41bc354] NLSolversBase v7.10.0 [77ba4419] NaNMath v1.1.3 [8913a72c] NonlinearSolve v4.13.0 [be0214bd] NonlinearSolveBase v2.9.0 [5959db7a] NonlinearSolveFirstOrder v1.11.0 [9a2c21bd] NonlinearSolveQuasiNewton v1.12.0 [26075421] NonlinearSolveSpectralMethods v1.6.0 [429524aa] Optim v1.13.3 [bac558e1] OrderedCollections v1.8.1 [1dea7af3] OrdinaryDiffEq v6.105.0 [89bda076] OrdinaryDiffEqAdamsBashforthMoulton v1.8.0 [6ad6398a] OrdinaryDiffEqBDF v1.13.0 [bbf590c4] OrdinaryDiffEqCore v2.3.0 [50262376] OrdinaryDiffEqDefault v1.11.0 [4302a76b] OrdinaryDiffEqDifferentiation v1.21.0 [9286f039] OrdinaryDiffEqExplicitRK v1.7.0 [e0540318] OrdinaryDiffEqExponentialRK v1.11.0 [becaefa8] OrdinaryDiffEqExtrapolation v1.12.0 [5960d6e9] OrdinaryDiffEqFIRK v1.19.0 [101fe9f7] OrdinaryDiffEqFeagin v1.7.0 [d3585ca7] OrdinaryDiffEqFunctionMap v1.8.0 [d28bc4f8] OrdinaryDiffEqHighOrderRK v1.8.0 [9f002381] OrdinaryDiffEqIMEXMultistep v1.10.0 [521117fe] OrdinaryDiffEqLinear v1.9.0 [1344f307] OrdinaryDiffEqLowOrderRK v1.9.0 [b0944070] OrdinaryDiffEqLowStorageRK v1.10.0 [127b3ac7] OrdinaryDiffEqNonlinearSolve v1.18.0 [c9986a66] OrdinaryDiffEqNordsieck v1.7.0 [5dd0a6cf] OrdinaryDiffEqPDIRK v1.9.0 [5b33eab2] OrdinaryDiffEqPRK v1.7.0 [04162be5] OrdinaryDiffEqQPRK v1.7.0 [af6ede74] OrdinaryDiffEqRKN v1.8.0 [43230ef6] OrdinaryDiffEqRosenbrock v1.21.0 [2d112036] OrdinaryDiffEqSDIRK v1.10.0 [669c94d9] OrdinaryDiffEqSSPRK v1.10.0 [e3e12d00] OrdinaryDiffEqStabilizedIRK v1.9.0 [358294b1] OrdinaryDiffEqStabilizedRK v1.7.0 [fa646aed] OrdinaryDiffEqSymplecticRK v1.10.0 [b1df2697] OrdinaryDiffEqTsit5 v1.8.0 [79d7bb75] OrdinaryDiffEqVerner v1.9.0 [90014a1f] PDMats v0.11.37 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [f517fe37] Polyester v0.7.18 [1d0040c9] PolyesterWeave v0.2.2 [2dfb63ee] PooledArrays v1.4.3 [85a6dd25] PositiveFactorizations v0.2.4 ⌅ [d236fae5] PreallocationTools v0.4.34 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.1 [08abe8d2] PrettyTables v3.1.2 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [817f1d60] ReTestItems v1.35.0 [3cdcf5f2] RecipesBase v1.3.4 [731186ca] RecursiveArrayTools v3.42.1 [189a3867] Reexport v1.2.2 [2792f1a3] RegistryInstances v0.1.0 [ae029012] Requires v1.3.1 [295af30f] Revise v3.12.3 [79098fc4] Rmath v0.9.0 [7e49a35a] RuntimeGeneratedFunctions v0.5.16 [94e857df] SIMDTypes v0.1.0 [0bca4576] SciMLBase v2.131.0 [19f34311] SciMLJacobianOperators v0.1.12 [a6db7da4] SciMLLogging v1.8.0 [c0aeaf25] SciMLOperators v1.14.1 [431bcebd] SciMLPublic v1.0.1 [53ae85a6] SciMLStructures v1.9.0 [91c51154] SentinelArrays v1.4.9 [efcf1570] Setfield v1.1.2 [727e6d20] SimpleNonlinearSolve v2.10.0 [a2af1166] SortingAlgorithms v1.2.2 [0a514795] SparseMatrixColorings v0.4.23 [276daf66] SpecialFunctions v2.6.1 [aedffcd0] Static v1.3.1 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.16 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.9 [4c63d2b9] StatsFuns v1.5.2 [a2598c62] StochasticGene v1.5.10 [7792a7ef] StrideArraysCore v0.5.8 [892a3eda] StringManipulation v0.4.2 [2efcf032] SymbolicIndexingInterface v0.3.46 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [1e6cf692] TestEnv v1.103.0 [8290d209] ThreadingUtilities v0.5.5 [a759f4b9] TimerOutputs v0.5.29 [3bb67fe8] TranscodingStreams v0.11.3 [781d530d] TruncatedStacktraces v1.4.0 [3a884ed6] UnPack v1.0.2 [81def892] VersionParsing v1.3.0 [ea10d353] WeakRefStrings v1.4.2 [76eceee3] WorkerUtilities v1.6.1 [c2297ded] ZMQ v1.5.1 ⌅ [68821587] Arpack_jll v3.5.2+0 [2e619515] Expat_jll v2.7.3+0 [f5851436] FFTW_jll v3.3.11+0 [020c3dae] Git_LFS_jll v3.7.0+0 [f8c6e375] Git_jll v2.52.0+0 [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0 [aae0fff6] LSODA_jll v0.1.2+0 [94ce4f54] Libiconv_jll v1.18.0+0 [856f044c] MKL_jll v2025.2.0+0 [9bd350c2] OpenSSH_jll v10.2.1+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [8f1865be] ZeroMQ_jll v4.3.6+0 [a9144af2] libsodium_jll v1.0.21+0 [1317d2d5] oneTBB_jll v2022.0.0+1 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.17.0+0 [e37daf67] LibGit2_jll v1.9.2+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ┌ Warning: precompile directive │ precompile(Tuple{mbody.sig.parameters[1], Symbol, Bool, Bool, Iterators.Pairs{Symbol, Bool, Tuple{Symbol}, NamedTuple{(:skip_include,), Tuple{Bool}}}, typeof(methods_by_execution!), Compiled, MI, Module, Expr}) │ failed. Please report an issue in Revise (after checking for duplicates) or remove this directive. └ @ Revise ~/.julia/packages/Revise/KjLt4/src/precompile.jl:65  Downloading artifact: IntelOpenMP  Downloading artifact: oneTBB 2 dependencies had output during precompilation: ┌ MKL_jll │ Downloading artifact: IntelOpenMP │ Downloading artifact: oneTBB └ ┌ Revise │ ┌ Warning: precompile directive │ │ precompile(Tuple{mbody.sig.parameters[1], Symbol, Bool, Bool, Iterators.Pairs{Symbol, Bool, Tuple{Symbol}, NamedTuple{(:skip_include,), Tuple{Bool}}}, typeof(methods_by_execution!), Compiled, MI, Module, Expr}) │ │ failed. Please report an issue in Revise (after checking for duplicates) or remove this directive. │ └ @ Revise ~/.julia/packages/Revise/KjLt4/src/precompile.jl:65 └ ┌ Warning: The call to compilecache failed to create a usable precompiled cache file for StochasticGene [a2598c62-e771-4eb8-9887-959a94ab00ef] │ exception = Required dependency Base.PkgId(Base.UUID("21216c6a-2e73-6563-6e65-726566657250"), "Preferences") failed to load from a cache file. └ @ Base loading.jl:2949 ┌ Warning: The call to compilecache failed to create a usable precompiled cache file for CSV [336ed68f-0bac-5ca0-87d4-7b16caf5d00b] │ exception = Required dependency Base.PkgId(Base.UUID("21216c6a-2e73-6563-6e65-726566657250"), "Preferences") failed to load from a cache file. └ @ Base loading.jl:2949 ┌ Warning: The call to compilecache failed to create a usable precompiled cache file for Parsers [69de0a69-1ddd-5017-9359-2bf0b02dc9f0] │ exception = Required dependency Base.PkgId(Base.UUID("21216c6a-2e73-6563-6e65-726566657250"), "Preferences") failed to load from a cache file. └ @ Base loading.jl:2949 ┌ Warning: The call to compilecache failed to create a usable precompiled cache file for PrecompileTools [aea7be01-6a6a-4083-8856-8a6e6704d82a] │ exception = Required dependency Base.PkgId(Base.UUID("21216c6a-2e73-6563-6e65-726566657250"), "Preferences") failed to load from a cache file. └ @ Base loading.jl:2949 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("aea7be01-6a6a-4083-8856-8a6e6704d82a"), "PrecompileTools") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2872  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2724  [4] macro expansion  @ ./loading.jl:2652 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2616  [7] require  @ ./loading.jl:2592 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_using  @ ./module.jl:137 [inlined]  [11] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [12] top-level scope  @ ~/.julia/packages/Parsers/6Nt9C/src/precompile.jl:1  [13] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:310  [14] top-level scope  @ ~/.julia/packages/Parsers/6Nt9C/src/Parsers.jl:536  [15] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [16] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3308  [17] top-level scope  @ stdin:5  [18] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3150  [20] include_string  @ ./loading.jl:3160 [inlined]  [21] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [22] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/Parsers/6Nt9C/src/precompile.jl:1 in expression starting at /home/pkgeval/.julia/packages/Parsers/6Nt9C/src/Parsers.jl:1 in expression starting at stdin:5 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("69de0a69-1ddd-5017-9359-2bf0b02dc9f0"), "Parsers") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2872  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2724  [4] macro expansion  @ ./loading.jl:2652 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2616  [7] require  @ ./loading.jl:2592 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_using  @ ./module.jl:137 [inlined]  [11] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [12] top-level scope  @ ~/.julia/packages/InlineStrings/Una88/ext/ParsersExt.jl:2  [13] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3308  [15] top-level scope  @ stdin:5  [16] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3150  [18] include_string  @ ./loading.jl:3160 [inlined]  [19] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [20] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/InlineStrings/Una88/ext/ParsersExt.jl:1 in expression starting at stdin:5 2 dependencies had output during precompilation: ┌ Parsers │ ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("aea7be01-6a6a-4083-8856-8a6e6704d82a"), "PrecompileTools") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0) │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:44 │ [2] __require_prelocked(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2872 │ [3] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2724 │ [4] macro expansion │ @ ./loading.jl:2652 [inlined] │ [5] macro expansion │ @ ./lock.jl:376 [inlined] │ [6] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2616 │ [7] require │ @ ./loading.jl:2592 [inlined] │ [8] eval_import_path │ @ ./module.jl:36 [inlined] │ [9] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [10] _eval_using │ @ ./module.jl:137 [inlined] │ [11] _eval_using(to::Module, path::Expr) │ @ Base ./module.jl:137 │ [12] top-level scope │ @ ~/.julia/packages/Parsers/6Nt9C/src/precompile.jl:1 │ [13] include(mapexpr::Function, mod::Module, _path::String) │ @ Base ./Base.jl:310 │ [14] top-level scope │ @ ~/.julia/packages/Parsers/6Nt9C/src/Parsers.jl:536 │ [15] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [16] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base ./loading.jl:3308 │ [17] top-level scope │ @ stdin:5 │ [18] eval(m::Module, e::Any) │ @ Core ./boot.jl:489 │ [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:3150 │ [20] include_string │ @ ./loading.jl:3160 [inlined] │ [21] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:342 │ [22] _start() │ @ Base ./client.jl:585 │ in expression starting at /home/pkgeval/.julia/packages/Parsers/6Nt9C/src/precompile.jl:1 │ in expression starting at /home/pkgeval/.julia/packages/Parsers/6Nt9C/src/Parsers.jl:1 │ in expression starting at stdin:5 └ ┌ InlineStrings → ParsersExt │ [Output was shown above] └ ┌ Error: Error during loading of extension ParsersExt of InlineStrings, use `Base.retry_load_extensions()` to retry. │ exception = │ 1-element ExceptionStack: │ The following 2 packages failed to precompile: │ │ Parsers │ Failed to precompile Parsers [69de0a69-1ddd-5017-9359-2bf0b02dc9f0] to "/home/pkgeval/.julia/compiled/v1.14/Parsers/jl_qVwk5K" (ProcessExited(1)). │ │ InlineStrings → ParsersExt │ Failed to precompile ParsersExt [097d45fb-70fa-51a7-8754-18de123af20a] to "/home/pkgeval/.julia/compiled/v1.14/ParsersExt/jl_Qfjp85" (ProcessExited(1)). │ └ @ Base loading.jl:1780 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("aea7be01-6a6a-4083-8856-8a6e6704d82a"), "PrecompileTools") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2872  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2724  [4] macro expansion  @ ./loading.jl:2652 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2616  [7] require  @ ./loading.jl:2592 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_using  @ ./module.jl:137 [inlined]  [11] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [12] top-level scope  @ ~/.julia/packages/Parsers/6Nt9C/src/precompile.jl:1  [13] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:310  [14] top-level scope  @ ~/.julia/packages/Parsers/6Nt9C/src/Parsers.jl:536  [15] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [16] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3308  [17] top-level scope  @ stdin:5  [18] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3150  [20] include_string  @ ./loading.jl:3160 [inlined]  [21] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [22] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/Parsers/6Nt9C/src/precompile.jl:1 in expression starting at /home/pkgeval/.julia/packages/Parsers/6Nt9C/src/Parsers.jl:1 in expression starting at stdin:5 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("69de0a69-1ddd-5017-9359-2bf0b02dc9f0"), "Parsers") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2872  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2724  [4] macro expansion  @ ./loading.jl:2652 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2616  [7] require  @ ./loading.jl:2592 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_using  @ ./module.jl:137 [inlined]  [11] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [12] top-level scope  @ ~/.julia/packages/InlineStrings/Una88/ext/ParsersExt.jl:2  [13] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3308  [15] top-level scope  @ stdin:5  [16] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3150  [18] include_string  @ ./loading.jl:3160 [inlined]  [19] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [20] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/InlineStrings/Una88/ext/ParsersExt.jl:1 in expression starting at stdin:5 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("69de0a69-1ddd-5017-9359-2bf0b02dc9f0"), "Parsers") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2872  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2724  [4] macro expansion  @ ./loading.jl:2652 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2616  [7] require  @ ./loading.jl:2592 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_using  @ ./module.jl:137 [inlined]  [11] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [12] top-level scope  @ ~/.julia/packages/WeakRefStrings/31nkb/src/WeakRefStrings.jl:3  [13] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3308  [15] top-level scope  @ stdin:5  [16] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3150  [18] include_string  @ ./loading.jl:3160 [inlined]  [19] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [20] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/WeakRefStrings/31nkb/src/WeakRefStrings.jl:1 in expression starting at stdin:5 3 dependencies had output during precompilation: ┌ Parsers │ ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("aea7be01-6a6a-4083-8856-8a6e6704d82a"), "PrecompileTools") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0) │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:44 │ [2] __require_prelocked(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2872 │ [3] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2724 │ [4] macro expansion │ @ ./loading.jl:2652 [inlined] │ [5] macro expansion │ @ ./lock.jl:376 [inlined] │ [6] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2616 │ [7] require │ @ ./loading.jl:2592 [inlined] │ [8] eval_import_path │ @ ./module.jl:36 [inlined] │ [9] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [10] _eval_using │ @ ./module.jl:137 [inlined] │ [11] _eval_using(to::Module, path::Expr) │ @ Base ./module.jl:137 │ [12] top-level scope │ @ ~/.julia/packages/Parsers/6Nt9C/src/precompile.jl:1 │ [13] include(mapexpr::Function, mod::Module, _path::String) │ @ Base ./Base.jl:310 │ [14] top-level scope │ @ ~/.julia/packages/Parsers/6Nt9C/src/Parsers.jl:536 │ [15] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [16] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base ./loading.jl:3308 │ [17] top-level scope │ @ stdin:5 │ [18] eval(m::Module, e::Any) │ @ Core ./boot.jl:489 │ [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:3150 │ [20] include_string │ @ ./loading.jl:3160 [inlined] │ [21] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:342 │ [22] _start() │ @ Base ./client.jl:585 │ in expression starting at /home/pkgeval/.julia/packages/Parsers/6Nt9C/src/precompile.jl:1 │ in expression starting at /home/pkgeval/.julia/packages/Parsers/6Nt9C/src/Parsers.jl:1 │ in expression starting at stdin:5 └ ┌ InlineStrings → ParsersExt │ ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("69de0a69-1ddd-5017-9359-2bf0b02dc9f0"), "Parsers") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0) │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:44 │ [2] __require_prelocked(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2872 │ [3] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2724 │ [4] macro expansion │ @ ./loading.jl:2652 [inlined] │ [5] macro expansion │ @ ./lock.jl:376 [inlined] │ [6] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2616 │ [7] require │ @ ./loading.jl:2592 [inlined] │ [8] eval_import_path │ @ ./module.jl:36 [inlined] │ [9] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [10] _eval_using │ @ ./module.jl:137 [inlined] │ [11] _eval_using(to::Module, path::Expr) │ @ Base ./module.jl:137 │ [12] top-level scope │ @ ~/.julia/packages/InlineStrings/Una88/ext/ParsersExt.jl:2 │ [13] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base ./loading.jl:3308 │ [15] top-level scope │ @ stdin:5 │ [16] eval(m::Module, e::Any) │ @ Core ./boot.jl:489 │ [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:3150 │ [18] include_string │ @ ./loading.jl:3160 [inlined] │ [19] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:342 │ [20] _start() │ @ Base ./client.jl:585 │ in expression starting at /home/pkgeval/.julia/packages/InlineStrings/Una88/ext/ParsersExt.jl:1 │ in expression starting at stdin:5 └ ┌ WeakRefStrings │ [Output was shown above] └ ERROR: LoadError: The following 3 packages failed to precompile: Parsers Failed to precompile Parsers [69de0a69-1ddd-5017-9359-2bf0b02dc9f0] to "/home/pkgeval/.julia/compiled/v1.14/Parsers/jl_xjLSSa" (ProcessExited(1)). InlineStrings → ParsersExt Failed to precompile ParsersExt [097d45fb-70fa-51a7-8754-18de123af20a] to "/home/pkgeval/.julia/compiled/v1.14/ParsersExt/jl_Izqhha" (ProcessExited(1)). WeakRefStrings Failed to precompile WeakRefStrings [ea10d353-3f73-51f8-a26c-33c1cb351aa5] to "/home/pkgeval/.julia/compiled/v1.14/WeakRefStrings/jl_vKiEzW" (ProcessExited(1)). in expression starting at /home/pkgeval/.julia/packages/CSV/XLcqT/src/CSV.jl:1 in expression starting at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/StochasticGene.jl:4 in expression starting at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/test/runtests.jl:8 Testing failed after 1190.47s ERROR: LoadError: Package StochasticGene errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3067 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2916 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:237 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:585 in expression starting at /PkgEval.jl/scripts/evaluate.jl:228 PkgEval failed after 1402.0s: package fails to precompile