Package evaluation to test MicrobiomeAnalysis on Julia 1.14.0-DEV.1441 (812f3beb0a*) started at 2025-12-30T23:03:06.364


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...
  Activating project at `~/.julia/environments/v1.14`

Set-up completed after 9.02s


################################################################################
# Installation
#

Installing MicrobiomeAnalysis...
   Resolving package versions...
    Updating `~/.julia/environments/v1.14/Project.toml`
  [09137a06] + MicrobiomeAnalysis v0.4.0
    Updating `~/.julia/environments/v1.14/Manifest.toml`
  [621f4979] + AbstractFFTs v1.5.0
  [7d9fca2a] + Arpack v0.5.4
  [d1d4a3ce] + BitFlags v0.1.9
  [336ed68f] + CSV v0.10.15
  [944b1d66] + CodecZlib v0.7.8
  [35d6a980] + ColorSchemes v3.31.0
  [3da002f7] + ColorTypes v0.12.1
  [c3611d14] + ColorVectorSpace v0.11.0
  [5ae59095] + Colors v0.13.1
  [34da2185] + Compat v4.18.1
  [f0e56b4a] + ConcurrentUtilities v2.5.0
  [d38c429a] + Contour v0.6.3
  [a8cc5b0e] + Crayons v4.1.1
  [9a962f9c] + DataAPI v1.16.0
  [a93c6f00] + DataFrames v1.8.1
⌅ [864edb3b] + DataStructures v0.18.22
  [e2d170a0] + DataValueInterfaces v1.0.0
  [8bb1440f] + DelimitedFiles v1.9.1
⌅ [85a47980] + Dictionaries v0.3.29
  [b4f34e82] + Distances v0.10.12
  [ffbed154] + DocStringExtensions v0.9.5
  [a58aae7d] + EcoBase v0.1.7
  [460bff9d] + ExceptionUnwrapping v0.1.11
  [c87230d0] + FFMPEG v0.4.5
  [7a1cc6ca] + FFTW v1.10.0
  [1746e360] + FdeSolver v1.0.9
  [48062228] + FilePathsBase v0.9.24
  [53c48c17] + FixedPointNumbers v0.8.5
  [1fa38f19] + Format v1.3.7
  [28b8d3ca] + GR v0.73.19
  [42e2da0e] + Grisu v1.0.2
  [cd3eb016] + HTTP v1.10.19
  [313cdc1a] + Indexing v1.1.1
  [842dd82b] + InlineStrings v1.4.5
  [bd334432] + InlineTest v0.2.0
  [41ab1584] + InvertedIndices v1.3.1
  [92d709cd] + IrrationalConstants v0.2.6
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [1019f520] + JLFzf v0.1.11
  [692b3bcd] + JLLWrappers v1.7.1
  [682c06a0] + JSON v1.3.0
  [b964fa9f] + LaTeXStrings v1.4.0
  [23fbe1c1] + Latexify v0.16.10
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [e6f89c97] + LoggingExtras v1.2.0
  [1914dd2f] + MacroTools v0.5.16
  [739be429] + MbedTLS v1.1.9
  [442fdcdd] + Measures v0.3.3
⌅ [3bd8f0ae] + Microbiome v0.9.4
  [09137a06] + MicrobiomeAnalysis v0.4.0
  [e1d29d7a] + Missings v1.2.0
  [c9137f73] + MultiAssayExperiments v0.2.0
⌅ [6f286f6a] + MultivariateStats v0.9.1
  [77ba4419] + NaNMath v1.1.3
  [4d8831e6] + OpenSSL v1.6.1
  [bac558e1] + OrderedCollections v1.8.1
  [69de0a69] + Parsers v2.8.3
  [ccf2f8ad] + PlotThemes v3.3.0
  [995b91a9] + PlotUtils v1.4.4
  [91a5bcdd] + Plots v1.41.3
  [2dfb63ee] + PooledArrays v1.4.3
  [aea7be01] + PrecompileTools v1.3.3
  [21216c6a] + Preferences v1.5.1
  [08abe8d2] + PrettyTables v3.1.2
  [e0db7c4e] + ReTest v0.3.4
  [3cdcf5f2] + RecipesBase v1.3.4
  [01d81517] + RecipesPipeline v0.6.12
  [189a3867] + Reexport v1.2.2
  [05181044] + RelocatableFolders v1.0.1
  [ae029012] + Requires v1.3.1
  [6c6a2e73] + Scratch v1.3.0
  [91c51154] + SentinelArrays v1.4.9
  [992d4aef] + Showoff v1.0.3
  [777ac1f9] + SimpleBufferStream v1.2.0
  [a2af1166] + SortingAlgorithms v1.2.2
  [276daf66] + SpecialFunctions v2.6.1
  [860ef19b] + StableRNGs v1.0.4
  [10745b16] + Statistics v1.11.1
⌅ [82ae8749] + StatsAPI v1.2.2
⌅ [2913bbd2] + StatsBase v0.33.21
  [892a3eda] + StringManipulation v0.4.2
  [ec057cc2] + StructUtils v2.6.0
  [b04b66ec] + SummarizedExperiments v0.2.0
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.1
  [62fd8b95] + TensorCore v0.1.1
  [3bb67fe8] + TranscodingStreams v0.11.3
  [5c2747f8] + URIs v1.6.1
  [1cfade01] + UnicodeFun v0.4.1
  [41fe7b60] + Unzip v0.2.0
  [ea10d353] + WeakRefStrings v1.4.2
  [76eceee3] + WorkerUtilities v1.6.1
⌅ [68821587] + Arpack_jll v3.5.2+0
  [6e34b625] + Bzip2_jll v1.0.9+0
  [83423d85] + Cairo_jll v1.18.5+0
  [ee1fde0b] + Dbus_jll v1.16.2+0
  [2702e6a9] + EpollShim_jll v0.0.20230411+1
  [2e619515] + Expat_jll v2.7.3+0
  [b22a6f82] + FFMPEG_jll v8.0.1+0
  [f5851436] + FFTW_jll v3.3.11+0
  [a3f928ae] + Fontconfig_jll v2.17.1+0
  [d7e528f0] + FreeType2_jll v2.13.4+0
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  [0656b61e] + GLFW_jll v3.4.1+0
  [d2c73de3] + GR_jll v0.73.19+1
  [b0724c58] + GettextRuntime_jll v0.22.4+0
  [61579ee1] + Ghostscript_jll v9.55.1+0
  [7746bdde] + Glib_jll v2.86.2+0
  [3b182d85] + Graphite2_jll v1.3.15+0
  [2e76f6c2] + HarfBuzz_jll v8.5.1+0
  [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0
  [aacddb02] + JpegTurbo_jll v3.1.4+0
  [c1c5ebd0] + LAME_jll v3.100.3+0
  [88015f11] + LERC_jll v4.0.1+0
  [1d63c593] + LLVMOpenMP_jll v18.1.8+0
  [dd4b983a] + LZO_jll v2.10.3+0
⌅ [e9f186c6] + Libffi_jll v3.4.7+0
  [7e76a0d4] + Libglvnd_jll v1.7.1+1
  [94ce4f54] + Libiconv_jll v1.18.0+0
  [4b2f31a3] + Libmount_jll v2.41.2+0
  [89763e89] + Libtiff_jll v4.7.2+0
  [38a345b3] + Libuuid_jll v2.41.2+0
  [856f044c] + MKL_jll v2025.2.0+0
  [c8ffd9c3] + MbedTLS_jll v2.28.1010+0
  [e7412a2a] + Ogg_jll v1.3.6+0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [91d4177d] + Opus_jll v1.5.2+0
  [36c8627f] + Pango_jll v1.57.0+0
⌅ [30392449] + Pixman_jll v0.44.2+0
  [c0090381] + Qt6Base_jll v6.8.2+2
  [629bc702] + Qt6Declarative_jll v6.8.2+1
  [ce943373] + Qt6ShaderTools_jll v6.8.2+1
  [e99dba38] + Qt6Wayland_jll v6.8.2+2
  [a44049a8] + Vulkan_Loader_jll v1.3.243+0
  [a2964d1f] + Wayland_jll v1.24.0+0
  [ffd25f8a] + XZ_jll v5.8.2+0
  [f67eecfb] + Xorg_libICE_jll v1.1.2+0
  [c834827a] + Xorg_libSM_jll v1.2.6+0
  [4f6342f7] + Xorg_libX11_jll v1.8.12+0
  [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0
  [935fb764] + Xorg_libXcursor_jll v1.2.4+0
  [a3789734] + Xorg_libXdmcp_jll v1.1.6+0
  [1082639a] + Xorg_libXext_jll v1.3.7+0
  [d091e8ba] + Xorg_libXfixes_jll v6.0.2+0
  [a51aa0fd] + Xorg_libXi_jll v1.8.3+0
  [d1454406] + Xorg_libXinerama_jll v1.1.6+0
  [ec84b674] + Xorg_libXrandr_jll v1.5.5+0
  [ea2f1a96] + Xorg_libXrender_jll v0.9.12+0
  [c7cfdc94] + Xorg_libxcb_jll v1.17.1+0
  [cc61e674] + Xorg_libxkbfile_jll v1.1.3+0
  [e920d4aa] + Xorg_xcb_util_cursor_jll v0.1.6+0
  [12413925] + Xorg_xcb_util_image_jll v0.4.1+0
  [2def613f] + Xorg_xcb_util_jll v0.4.1+0
  [975044d2] + Xorg_xcb_util_keysyms_jll v0.4.1+0
  [0d47668e] + Xorg_xcb_util_renderutil_jll v0.3.10+0
  [c22f9ab0] + Xorg_xcb_util_wm_jll v0.4.2+0
  [35661453] + Xorg_xkbcomp_jll v1.4.7+0
  [33bec58e] + Xorg_xkeyboard_config_jll v2.44.0+0
  [c5fb5394] + Xorg_xtrans_jll v1.6.0+0
  [35ca27e7] + eudev_jll v3.2.14+0
  [214eeab7] + fzf_jll v0.61.1+0
  [a4ae2306] + libaom_jll v3.13.1+0
  [0ac62f75] + libass_jll v0.17.4+0
  [1183f4f0] + libdecor_jll v0.2.2+0
  [2db6ffa8] + libevdev_jll v1.13.4+0
  [f638f0a6] + libfdk_aac_jll v2.0.4+0
  [36db933b] + libinput_jll v1.28.1+0
  [b53b4c65] + libpng_jll v1.6.53+0
  [f27f6e37] + libvorbis_jll v1.3.8+0
  [009596ad] + mtdev_jll v1.1.7+0
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  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [9fa8497b] + Future v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0
  [4af54fe1] + LazyArtifacts v1.11.0
  [b27032c2] + LibCURL v1.0.0
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.14.0
  [de0858da] + Printf v1.11.0
  [3fa0cd96] + REPL v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v1.0.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [f489334b] + StyledStrings v1.13.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.17.0+0
  [e37daf67] + LibGit2_jll v1.9.2+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.12.2
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.7+0
  [458c3c95] + OpenSSL_jll v3.5.4+0
  [efcefdf7] + PCRE2_jll v10.47.0+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [83775a58] + Zlib_jll v1.3.1+2
  [3161d3a3] + Zstd_jll v1.5.7+1
  [8e850b90] + libblastrampoline_jll v5.15.0+0
  [8e850ede] + nghttp2_jll v1.68.0+1
  [3f19e933] + p7zip_jll v17.7.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 5.52s


################################################################################
# Precompilation
#

ERROR: LoadError: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Nothing)
The function `setindex!` exists, but no method is defined for this combination of argument types.
Stacktrace:
 [1] top-level scope
   @ /PkgEval.jl/scripts/precompile.jl:10
 [2] include(mod::Module, _path::String)
   @ Base ./Base.jl:309
 [3] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:344
 [4] _start()
   @ Base ./client.jl:585
in expression starting at /PkgEval.jl/scripts/precompile.jl:6

caused by: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Base.DevNull)
The function `setindex!` exists, but no method is defined for this combination of argument types.
Stacktrace:
 [1] top-level scope
   @ /PkgEval.jl/scripts/precompile.jl:7
 [2] include(mod::Module, _path::String)
   @ Base ./Base.jl:309
 [3] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:344
 [4] _start()
   @ Base ./client.jl:585

Precompilation failed after 12.95s



################################################################################
# Testing
#

     Testing MicrobiomeAnalysis
      Status `/tmp/jl_ijkRGl/Project.toml`
  [336ed68f] CSV v0.10.15
  [a93c6f00] DataFrames v1.8.1
⌅ [864edb3b] DataStructures v0.18.22
  [b4f34e82] Distances v0.10.12
  [1746e360] FdeSolver v1.0.9
⌅ [3bd8f0ae] Microbiome v0.9.4
  [09137a06] MicrobiomeAnalysis v0.4.0
  [c9137f73] MultiAssayExperiments v0.2.0
⌅ [6f286f6a] MultivariateStats v0.9.1
  [91a5bcdd] Plots v1.41.3
  [189a3867] Reexport v1.2.2
  [1bc83da4] SafeTestsets v0.1.0
  [10745b16] Statistics v1.11.1
  [b04b66ec] SummarizedExperiments v0.2.0
  [9a3f8284] Random v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_ijkRGl/Manifest.toml`
  [621f4979] AbstractFFTs v1.5.0
  [7d9fca2a] Arpack v0.5.4
  [d1d4a3ce] BitFlags v0.1.9
  [336ed68f] CSV v0.10.15
  [944b1d66] CodecZlib v0.7.8
  [35d6a980] ColorSchemes v3.31.0
  [3da002f7] ColorTypes v0.12.1
  [c3611d14] ColorVectorSpace v0.11.0
  [5ae59095] Colors v0.13.1
  [34da2185] Compat v4.18.1
  [f0e56b4a] ConcurrentUtilities v2.5.0
  [d38c429a] Contour v0.6.3
  [a8cc5b0e] Crayons v4.1.1
  [9a962f9c] DataAPI v1.16.0
  [a93c6f00] DataFrames v1.8.1
⌅ [864edb3b] DataStructures v0.18.22
  [e2d170a0] DataValueInterfaces v1.0.0
  [8bb1440f] DelimitedFiles v1.9.1
⌅ [85a47980] Dictionaries v0.3.29
  [b4f34e82] Distances v0.10.12
  [ffbed154] DocStringExtensions v0.9.5
  [a58aae7d] EcoBase v0.1.7
  [460bff9d] ExceptionUnwrapping v0.1.11
  [c87230d0] FFMPEG v0.4.5
  [7a1cc6ca] FFTW v1.10.0
  [1746e360] FdeSolver v1.0.9
  [48062228] FilePathsBase v0.9.24
  [53c48c17] FixedPointNumbers v0.8.5
  [1fa38f19] Format v1.3.7
  [28b8d3ca] GR v0.73.19
  [42e2da0e] Grisu v1.0.2
  [cd3eb016] HTTP v1.10.19
  [313cdc1a] Indexing v1.1.1
  [842dd82b] InlineStrings v1.4.5
  [bd334432] InlineTest v0.2.0
  [41ab1584] InvertedIndices v1.3.1
  [92d709cd] IrrationalConstants v0.2.6
  [82899510] IteratorInterfaceExtensions v1.0.0
  [1019f520] JLFzf v0.1.11
  [692b3bcd] JLLWrappers v1.7.1
  [682c06a0] JSON v1.3.0
  [b964fa9f] LaTeXStrings v1.4.0
  [23fbe1c1] Latexify v0.16.10
  [2ab3a3ac] LogExpFunctions v0.3.29
  [e6f89c97] LoggingExtras v1.2.0
  [1914dd2f] MacroTools v0.5.16
  [739be429] MbedTLS v1.1.9
  [442fdcdd] Measures v0.3.3
⌅ [3bd8f0ae] Microbiome v0.9.4
  [09137a06] MicrobiomeAnalysis v0.4.0
  [e1d29d7a] Missings v1.2.0
  [c9137f73] MultiAssayExperiments v0.2.0
⌅ [6f286f6a] MultivariateStats v0.9.1
  [77ba4419] NaNMath v1.1.3
  [4d8831e6] OpenSSL v1.6.1
  [bac558e1] OrderedCollections v1.8.1
  [69de0a69] Parsers v2.8.3
  [ccf2f8ad] PlotThemes v3.3.0
  [995b91a9] PlotUtils v1.4.4
  [91a5bcdd] Plots v1.41.3
  [2dfb63ee] PooledArrays v1.4.3
  [aea7be01] PrecompileTools v1.3.3
  [21216c6a] Preferences v1.5.1
  [08abe8d2] PrettyTables v3.1.2
  [e0db7c4e] ReTest v0.3.4
  [3cdcf5f2] RecipesBase v1.3.4
  [01d81517] RecipesPipeline v0.6.12
  [189a3867] Reexport v1.2.2
  [05181044] RelocatableFolders v1.0.1
  [ae029012] Requires v1.3.1
  [1bc83da4] SafeTestsets v0.1.0
  [6c6a2e73] Scratch v1.3.0
  [91c51154] SentinelArrays v1.4.9
  [992d4aef] Showoff v1.0.3
  [777ac1f9] SimpleBufferStream v1.2.0
  [a2af1166] SortingAlgorithms v1.2.2
  [276daf66] SpecialFunctions v2.6.1
  [860ef19b] StableRNGs v1.0.4
  [10745b16] Statistics v1.11.1
⌅ [82ae8749] StatsAPI v1.2.2
⌅ [2913bbd2] StatsBase v0.33.21
  [892a3eda] StringManipulation v0.4.2
  [ec057cc2] StructUtils v2.6.0
  [b04b66ec] SummarizedExperiments v0.2.0
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.1
  [62fd8b95] TensorCore v0.1.1
  [3bb67fe8] TranscodingStreams v0.11.3
  [5c2747f8] URIs v1.6.1
  [1cfade01] UnicodeFun v0.4.1
  [41fe7b60] Unzip v0.2.0
  [ea10d353] WeakRefStrings v1.4.2
  [76eceee3] WorkerUtilities v1.6.1
⌅ [68821587] Arpack_jll v3.5.2+0
  [6e34b625] Bzip2_jll v1.0.9+0
  [83423d85] Cairo_jll v1.18.5+0
  [ee1fde0b] Dbus_jll v1.16.2+0
  [2702e6a9] EpollShim_jll v0.0.20230411+1
  [2e619515] Expat_jll v2.7.3+0
  [b22a6f82] FFMPEG_jll v8.0.1+0
  [f5851436] FFTW_jll v3.3.11+0
  [a3f928ae] Fontconfig_jll v2.17.1+0
  [d7e528f0] FreeType2_jll v2.13.4+0
  [559328eb] FriBidi_jll v1.0.17+0
  [0656b61e] GLFW_jll v3.4.1+0
  [d2c73de3] GR_jll v0.73.19+1
  [b0724c58] GettextRuntime_jll v0.22.4+0
  [61579ee1] Ghostscript_jll v9.55.1+0
  [7746bdde] Glib_jll v2.86.2+0
  [3b182d85] Graphite2_jll v1.3.15+0
  [2e76f6c2] HarfBuzz_jll v8.5.1+0
  [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0
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⌅ [e9f186c6] Libffi_jll v3.4.7+0
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⌅ [30392449] Pixman_jll v0.44.2+0
  [c0090381] Qt6Base_jll v6.8.2+2
  [629bc702] Qt6Declarative_jll v6.8.2+1
  [ce943373] Qt6ShaderTools_jll v6.8.2+1
  [e99dba38] Qt6Wayland_jll v6.8.2+2
  [a44049a8] Vulkan_Loader_jll v1.3.243+0
  [a2964d1f] Wayland_jll v1.24.0+0
  [ffd25f8a] XZ_jll v5.8.2+0
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  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
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  [8e850b90] libblastrampoline_jll v5.15.0+0
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  [3f19e933] p7zip_jll v17.7.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
WARNING: Imported binding Test.pop_testset was undeclared at import time during import to Testset.
WARNING: Imported binding Test.push_testset was undeclared at import time during import to Testset.
┌ Error: Precompilation failed, this is the captured stdout (114 chars):
└ @ ReTest ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:36
                                   Pass  |  Time / Compile / GC |   Alloc   ΔRSS |
ReTest._ReTestPrecompileTests:

┌ Error: And this is the captured stderr (0 chars):
└ @ ReTest ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:39

ERROR: LoadError: TaskFailedException
Stacktrace:
  [1] #wait#586
    @ ./task.jl:363 [inlined]
  [2] wait
    @ ./task.jl:360 [inlined]
  [3] retest(::Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}, ::Vararg{Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}}; dry::Bool, stats::Bool, shuffle::Bool, group::Bool, verbose::Bool, recursive::Bool, id::Nothing, strict::Bool, dup::Bool, static::Nothing, load::Bool, seed::Bool, marks::Bool, tag::Vector{Symbol}, spin::Bool, clear::Bool)
    @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1186
  [4] kwcall(::@NamedTuple{recursive::Bool, stats::Bool, spin::Bool}, ::typeof(InlineTest.retest), ::Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}, ::Vararg{Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}})
    @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:750
  [5] #137
    @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:26 [inlined]
  [6] redirect_stdio(f::ReTest.var"#137#138"; stdin::Nothing, stderr::Pipe, stdout::Pipe)
    @ Base ./stream.jl:1449
  [7] kwcall(::@NamedTuple{stderr::Pipe, stdout::Pipe}, ::typeof(redirect_stdio), f::Function)
    @ Base ./stream.jl:1412
  [8] macro expansion
    @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:25 [inlined]
  [9] macro expansion
    @ ~/.julia/packages/PrecompileTools/gn08A/src/workloads.jl:73 [inlined]
 [10] macro expansion
    @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:23 [inlined]
 [11] macro expansion
    @ ~/.julia/packages/PrecompileTools/gn08A/src/workloads.jl:121 [inlined]
 [12] top-level scope
    @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:118
 [13] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:310
 [14] top-level scope
    @ ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1751
 [15] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [16] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3309
 [17] top-level scope
    @ stdin:5
 [18] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:3151
 [20] include_string
    @ ./loading.jl:3161 [inlined]
 [21] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:342
 [22] _start()
    @ Base ./client.jl:585

    nested task error: TaskFailedException
    
        nested task error: UndefVarError: `push_testset` not defined in `ReTest.Testset`
        Suggestion: this global was defined as `Test.push_testset` but not assigned a value.
        Stacktrace:
          [1] top-level scope
            @ ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:517
          [2] macro expansion
            @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:12 [inlined]
          [3] macro expansion
            @ ~/.julia/packages/ReTest/3Ikse/src/testset.jl:517 [inlined]
          [4] eval(m::Module, e::Any)
            @ Core ./boot.jl:489
          [5] (::ReTest.var"#110#111"{ReTest.Testset.Format})(mod::Module, ts::ReTest.TestsetExpr, pat::ReTest.And, chan::@NamedTuple{out::Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, compute::Channel{Nothing}, preview::Nothing})
            @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1154
          [6] #local_remotecall_thunk##0
            @ /opt/julia/share/julia/stdlib/v1.14/Distributed/src/remotecall.jl:425 [inlined]
          [7] run_work_thunk(thunk::Distributed.var"#local_remotecall_thunk##0#local_remotecall_thunk##1"{ReTest.var"#110#111"{ReTest.Testset.Format}, Tuple{Module, ReTest.TestsetExpr, ReTest.And, @NamedTuple{out::Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, compute::Channel{Nothing}, preview::Nothing}}, @Kwargs{}}, print_error::Bool)
            @ Distributed /opt/julia/share/julia/stdlib/v1.14/Distributed/src/process_messages.jl:70
          [8] remotecall_fetch(::Function, ::Distributed.LocalProcess, ::Module, ::Vararg{Any}; kwargs::@Kwargs{})
            @ Distributed /opt/julia/share/julia/stdlib/v1.14/Distributed/src/remotecall.jl:450
          [9] remotecall_fetch
            @ /opt/julia/share/julia/stdlib/v1.14/Distributed/src/remotecall.jl:449 [inlined]
         [10] remotecall_fetch
            @ /opt/julia/share/julia/stdlib/v1.14/Distributed/src/remotecall.jl:492 [inlined]
         [11] (::ReTest.var"#106#107"{Int64, ReTest.Testset.Format, Nothing, ReTest.Testset.ReTestSet, Base.Threads.Atomic{Bool}, Channel{Nothing}, Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, Vector{Any}, ReTest.And, Module})()
            @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1151
        Stacktrace:
         [1] remotecall_fetch(::Function, ::Distributed.LocalProcess, ::Module, ::Vararg{Any}; kwargs::@Kwargs{})
           @ Distributed /opt/julia/share/julia/stdlib/v1.14/Distributed/src/remotecall.jl:451
         [2] remotecall_fetch
           @ /opt/julia/share/julia/stdlib/v1.14/Distributed/src/remotecall.jl:449 [inlined]
         [3] remotecall_fetch
           @ /opt/julia/share/julia/stdlib/v1.14/Distributed/src/remotecall.jl:492 [inlined]
         [4] (::ReTest.var"#106#107"{Int64, ReTest.Testset.Format, Nothing, ReTest.Testset.ReTestSet, Base.Threads.Atomic{Bool}, Channel{Nothing}, Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, Vector{Any}, ReTest.And, Module})()
           @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1151
    Stacktrace:
     [1] sync_end(c::Channel{Any})
       @ Base ./task.jl:630
     [2] macro expansion
       @ ./task.jl:663 [inlined]
     [3] (::ReTest.var"#96#97"{Bool, ReTest.Testset.Format, Bool, Base.RefValue{Int64}, Bool, ReTest.var"#take_latest!#91", Nothing, ReentrantLock, Bool, ReTest.Testset.ReTestSet, Base.Threads.Atomic{Bool}, Base.RefValue{Exception}, Channel{Nothing}, Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, Vector{Any}, ReTest.And, Module})()
       @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1104
in expression starting at /home/pkgeval/.julia/packages/ReTest/3Ikse/src/precompile.jl:19
in expression starting at /home/pkgeval/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1
in expression starting at stdin:5
ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("a93c6f00-e57d-5684-b7b6-d8193f3e46c0"), "DataFrames") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0)
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2873
  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2725
  [4] macro expansion
    @ ./loading.jl:2653 [inlined]
  [5] macro expansion
    @ ./lock.jl:376 [inlined]
  [6] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2617
  [7] require
    @ ./loading.jl:2593 [inlined]
  [8] eval_import_path
    @ ./module.jl:36 [inlined]
  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [10] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})
    @ Base ./module.jl:101
 [11] top-level scope
    @ ~/.julia/packages/SummarizedExperiments/Nxbzn/src/SummarizedExperiments.jl:5
 [12] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3309
 [14] top-level scope
    @ stdin:5
 [15] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:3151
 [17] include_string
    @ ./loading.jl:3161 [inlined]
 [18] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:342
 [19] _start()
    @ Base ./client.jl:585
in expression starting at /home/pkgeval/.julia/packages/SummarizedExperiments/Nxbzn/src/SummarizedExperiments.jl:1
in expression starting at stdin:5
ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("b04b66ec-f619-4ebf-810e-cf5ccc546695"), "SummarizedExperiments") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0)
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2873
  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2725
  [4] macro expansion
    @ ./loading.jl:2653 [inlined]
  [5] macro expansion
    @ ./lock.jl:376 [inlined]
  [6] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2617
  [7] require
    @ ./loading.jl:2593 [inlined]
  [8] eval_import_path
    @ ./module.jl:36 [inlined]
  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [10] _eval_using
    @ ./module.jl:137 [inlined]
 [11] _eval_using(to::Module, path::Expr)
    @ Base ./module.jl:137
 [12] top-level scope
    @ ~/.julia/packages/MultiAssayExperiments/VHg1a/src/MultiAssayExperiments.jl:4
 [13] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3309
 [15] top-level scope
    @ stdin:5
 [16] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:3151
 [18] include_string
    @ ./loading.jl:3161 [inlined]
 [19] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:342
 [20] _start()
    @ Base ./client.jl:585
in expression starting at /home/pkgeval/.julia/packages/MultiAssayExperiments/VHg1a/src/MultiAssayExperiments.jl:1
in expression starting at stdin:5
ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("e0db7c4e-2690-44b9-bad6-7687da720f89"), "ReTest") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0)
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2873
  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2725
  [4] macro expansion
    @ ./loading.jl:2653 [inlined]
  [5] macro expansion
    @ ./lock.jl:376 [inlined]
  [6] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2617
  [7] require
    @ ./loading.jl:2593 [inlined]
  [8] eval_import_path
    @ ./module.jl:36 [inlined]
  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [10] _eval_using
    @ ./module.jl:137 [inlined]
 [11] _eval_using(to::Module, path::Expr)
    @ Base ./module.jl:137
 [12] top-level scope
    @ ~/.julia/packages/Microbiome/BvZqT/src/Microbiome.jl:74
 [13] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3309
 [15] top-level scope
    @ stdin:5
 [16] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:3151
 [18] include_string
    @ ./loading.jl:3161 [inlined]
 [19] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:342
 [20] _start()
    @ Base ./client.jl:585
in expression starting at /home/pkgeval/.julia/packages/Microbiome/BvZqT/src/Microbiome.jl:1
in expression starting at stdin:5
ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("3bd8f0ae-a0f2-5238-a5af-e1b399a4940c"), "Microbiome") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0)
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2873
  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2725
  [4] macro expansion
    @ ./loading.jl:2653 [inlined]
  [5] macro expansion
    @ ./lock.jl:376 [inlined]
  [6] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2617
  [7] require
    @ ./loading.jl:2593 [inlined]
  [8] eval_import_path
    @ ./module.jl:36 [inlined]
  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [10] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})
    @ Base ./module.jl:101
 [11] top-level scope
    @ ~/.julia/packages/MicrobiomeAnalysis/fZGRE/src/MicrobiomeAnalysis.jl:10
 [12] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3309
 [14] top-level scope
    @ stdin:5
 [15] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:3151
 [17] include_string
    @ ./loading.jl:3161 [inlined]
 [18] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:342
 [19] _start()
    @ Base ./client.jl:585
in expression starting at /home/pkgeval/.julia/packages/MicrobiomeAnalysis/fZGRE/src/MicrobiomeAnalysis.jl:1
in expression starting at stdin:5

  5 dependencies had output during precompilation:
┌ ReTest
│  WARNING: Imported binding Test.pop_testset was undeclared at import time during import to Testset.
│  WARNING: Imported binding Test.push_testset was undeclared at import time during import to Testset.
│  ┌ Error: Precompilation failed, this is the captured stdout (114 chars):
│  └ @ ReTest ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:36
│                                     Pass  |  Time / Compile / GC |   Alloc   ΔRSS |
│  ReTest._ReTestPrecompileTests:
│  
│  ┌ Error: And this is the captured stderr (0 chars):
│  └ @ ReTest ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:39
│  
│  ERROR: LoadError: TaskFailedException
│  Stacktrace:
│    [1] #wait#586
│      @ ./task.jl:363 [inlined]
│    [2] wait
│      @ ./task.jl:360 [inlined]
│    [3] retest(::Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}, ::Vararg{Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}}; dry::Bool, stats::Bool, shuffle::Bool, group::Bool, verbose::Bool, recursive::Bool, id::Nothing, strict::Bool, dup::Bool, static::Nothing, load::Bool, seed::Bool, marks::Bool, tag::Vector{Symbol}, spin::Bool, clear::Bool)
│      @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1186
│    [4] kwcall(::@NamedTuple{recursive::Bool, stats::Bool, spin::Bool}, ::typeof(InlineTest.retest), ::Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}, ::Vararg{Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}})
│      @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:750
│    [5] #137
│      @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:26 [inlined]
│    [6] redirect_stdio(f::ReTest.var"#137#138"; stdin::Nothing, stderr::Pipe, stdout::Pipe)
│      @ Base ./stream.jl:1449
│    [7] kwcall(::@NamedTuple{stderr::Pipe, stdout::Pipe}, ::typeof(redirect_stdio), f::Function)
│      @ Base ./stream.jl:1412
│    [8] macro expansion
│      @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:25 [inlined]
│    [9] macro expansion
│      @ ~/.julia/packages/PrecompileTools/gn08A/src/workloads.jl:73 [inlined]
│   [10] macro expansion
│      @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:23 [inlined]
│   [11] macro expansion
│      @ ~/.julia/packages/PrecompileTools/gn08A/src/workloads.jl:121 [inlined]
│   [12] top-level scope
│      @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:118
│   [13] include(mapexpr::Function, mod::Module, _path::String)
│      @ Base ./Base.jl:310
│   [14] top-level scope
│      @ ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1751
│   [15] include(mod::Module, _path::String)
│      @ Base ./Base.jl:309
│   [16] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
│      @ Base ./loading.jl:3309
│   [17] top-level scope
│      @ stdin:5
│   [18] eval(m::Module, e::Any)
│      @ Core ./boot.jl:489
│   [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
│      @ Base ./loading.jl:3151
│   [20] include_string
│      @ ./loading.jl:3161 [inlined]
│   [21] exec_options(opts::Base.JLOptions)
│      @ Base ./client.jl:342
│   [22] _start()
│      @ Base ./client.jl:585
│  
│      nested task error: TaskFailedException
│      
│          nested task error: UndefVarError: `push_testset` not defined in `ReTest.Testset`
│          Suggestion: this global was defined as `Test.push_testset` but not assigned a value.
│          Stacktrace:
│            [1] top-level scope
│              @ ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:517
│            [2] macro expansion
│              @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:12 [inlined]
│            [3] macro expansion
│              @ ~/.julia/packages/ReTest/3Ikse/src/testset.jl:517 [inlined]
│            [4] eval(m::Module, e::Any)
│              @ Core ./boot.jl:489
│            [5] (::ReTest.var"#110#111"{ReTest.Testset.Format})(mod::Module, ts::ReTest.TestsetExpr, pat::ReTest.And, chan::@NamedTuple{out::Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, compute::Channel{Nothing}, preview::Nothing})
│              @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1154
│            [6] #local_remotecall_thunk##0
│              @ /opt/julia/share/julia/stdlib/v1.14/Distributed/src/remotecall.jl:425 [inlined]
│            [7] run_work_thunk(thunk::Distributed.var"#local_remotecall_thunk##0#local_remotecall_thunk##1"{ReTest.var"#110#111"{ReTest.Testset.Format}, Tuple{Module, ReTest.TestsetExpr, ReTest.And, @NamedTuple{out::Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, compute::Channel{Nothing}, preview::Nothing}}, @Kwargs{}}, print_error::Bool)
│              @ Distributed /opt/julia/share/julia/stdlib/v1.14/Distributed/src/process_messages.jl:70
│            [8] remotecall_fetch(::Function, ::Distributed.LocalProcess, ::Module, ::Vararg{Any}; kwargs::@Kwargs{})
│              @ Distributed /opt/julia/share/julia/stdlib/v1.14/Distributed/src/remotecall.jl:450
│            [9] remotecall_fetch
│              @ /opt/julia/share/julia/stdlib/v1.14/Distributed/src/remotecall.jl:449 [inlined]
│           [10] remotecall_fetch
│              @ /opt/julia/share/julia/stdlib/v1.14/Distributed/src/remotecall.jl:492 [inlined]
│           [11] (::ReTest.var"#106#107"{Int64, ReTest.Testset.Format, Nothing, ReTest.Testset.ReTestSet, Base.Threads.Atomic{Bool}, Channel{Nothing}, Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, Vector{Any}, ReTest.And, Module})()
│              @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1151
│          Stacktrace:
│           [1] remotecall_fetch(::Function, ::Distributed.LocalProcess, ::Module, ::Vararg{Any}; kwargs::@Kwargs{})
│             @ Distributed /opt/julia/share/julia/stdlib/v1.14/Distributed/src/remotecall.jl:451
│           [2] remotecall_fetch
│             @ /opt/julia/share/julia/stdlib/v1.14/Distributed/src/remotecall.jl:449 [inlined]
│           [3] remotecall_fetch
│             @ /opt/julia/share/julia/stdlib/v1.14/Distributed/src/remotecall.jl:492 [inlined]
│           [4] (::ReTest.var"#106#107"{Int64, ReTest.Testset.Format, Nothing, ReTest.Testset.ReTestSet, Base.Threads.Atomic{Bool}, Channel{Nothing}, Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, Vector{Any}, ReTest.And, Module})()
│             @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1151
│      Stacktrace:
│       [1] sync_end(c::Channel{Any})
│         @ Base ./task.jl:630
│       [2] macro expansion
│         @ ./task.jl:663 [inlined]
│       [3] (::ReTest.var"#96#97"{Bool, ReTest.Testset.Format, Bool, Base.RefValue{Int64}, Bool, ReTest.var"#take_latest!#91", Nothing, ReentrantLock, Bool, ReTest.Testset.ReTestSet, Base.Threads.Atomic{Bool}, Base.RefValue{Exception}, Channel{Nothing}, Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, Vector{Any}, ReTest.And, Module})()
│         @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1104
│  in expression starting at /home/pkgeval/.julia/packages/ReTest/3Ikse/src/precompile.jl:19
│  in expression starting at /home/pkgeval/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1
│  in expression starting at stdin:5
└  
┌ SummarizedExperiments
│  ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("a93c6f00-e57d-5684-b7b6-d8193f3e46c0"), "DataFrames") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0)
│  Stacktrace:
│    [1] error(s::String)
│      @ Base ./error.jl:44
│    [2] __require_prelocked(pkg::Base.PkgId, env::String)
│      @ Base ./loading.jl:2873
│    [3] _require_prelocked(uuidkey::Base.PkgId, env::String)
│      @ Base ./loading.jl:2725
│    [4] macro expansion
│      @ ./loading.jl:2653 [inlined]
│    [5] macro expansion
│      @ ./lock.jl:376 [inlined]
│    [6] __require(into::Module, mod::Symbol)
│      @ Base ./loading.jl:2617
│    [7] require
│      @ ./loading.jl:2593 [inlined]
│    [8] eval_import_path
│      @ ./module.jl:36 [inlined]
│    [9] eval_import_path_all(at::Module, path::Expr, keyword::String)
│      @ Base ./module.jl:60
│   [10] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})
│      @ Base ./module.jl:101
│   [11] top-level scope
│      @ ~/.julia/packages/SummarizedExperiments/Nxbzn/src/SummarizedExperiments.jl:5
│   [12] include(mod::Module, _path::String)
│      @ Base ./Base.jl:309
│   [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
│      @ Base ./loading.jl:3309
│   [14] top-level scope
│      @ stdin:5
│   [15] eval(m::Module, e::Any)
│      @ Core ./boot.jl:489
│   [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
│      @ Base ./loading.jl:3151
│   [17] include_string
│      @ ./loading.jl:3161 [inlined]
│   [18] exec_options(opts::Base.JLOptions)
│      @ Base ./client.jl:342
│   [19] _start()
│      @ Base ./client.jl:585
│  in expression starting at /home/pkgeval/.julia/packages/SummarizedExperiments/Nxbzn/src/SummarizedExperiments.jl:1
│  in expression starting at stdin:5
└  
┌ Microbiome
│  ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("e0db7c4e-2690-44b9-bad6-7687da720f89"), "ReTest") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0)
│  Stacktrace:
│    [1] error(s::String)
│      @ Base ./error.jl:44
│    [2] __require_prelocked(pkg::Base.PkgId, env::String)
│      @ Base ./loading.jl:2873
│    [3] _require_prelocked(uuidkey::Base.PkgId, env::String)
│      @ Base ./loading.jl:2725
│    [4] macro expansion
│      @ ./loading.jl:2653 [inlined]
│    [5] macro expansion
│      @ ./lock.jl:376 [inlined]
│    [6] __require(into::Module, mod::Symbol)
│      @ Base ./loading.jl:2617
│    [7] require
│      @ ./loading.jl:2593 [inlined]
│    [8] eval_import_path
│      @ ./module.jl:36 [inlined]
│    [9] eval_import_path_all(at::Module, path::Expr, keyword::String)
│      @ Base ./module.jl:60
│   [10] _eval_using
│      @ ./module.jl:137 [inlined]
│   [11] _eval_using(to::Module, path::Expr)
│      @ Base ./module.jl:137
│   [12] top-level scope
│      @ ~/.julia/packages/Microbiome/BvZqT/src/Microbiome.jl:74
│   [13] include(mod::Module, _path::String)
│      @ Base ./Base.jl:309
│   [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
│      @ Base ./loading.jl:3309
│   [15] top-level scope
│      @ stdin:5
│   [16] eval(m::Module, e::Any)
│      @ Core ./boot.jl:489
│   [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
│      @ Base ./loading.jl:3151
│   [18] include_string
│      @ ./loading.jl:3161 [inlined]
│   [19] exec_options(opts::Base.JLOptions)
│      @ Base ./client.jl:342
│   [20] _start()
│      @ Base ./client.jl:585
│  in expression starting at /home/pkgeval/.julia/packages/Microbiome/BvZqT/src/Microbiome.jl:1
│  in expression starting at stdin:5
└  
┌ MicrobiomeAnalysis
│  [Output was shown above]
└  
┌ MultiAssayExperiments
│  ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("b04b66ec-f619-4ebf-810e-cf5ccc546695"), "SummarizedExperiments") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0)
│  Stacktrace:
│    [1] error(s::String)
│      @ Base ./error.jl:44
│    [2] __require_prelocked(pkg::Base.PkgId, env::String)
│      @ Base ./loading.jl:2873
│    [3] _require_prelocked(uuidkey::Base.PkgId, env::String)
│      @ Base ./loading.jl:2725
│    [4] macro expansion
│      @ ./loading.jl:2653 [inlined]
│    [5] macro expansion
│      @ ./lock.jl:376 [inlined]
│    [6] __require(into::Module, mod::Symbol)
│      @ Base ./loading.jl:2617
│    [7] require
│      @ ./loading.jl:2593 [inlined]
│    [8] eval_import_path
│      @ ./module.jl:36 [inlined]
│    [9] eval_import_path_all(at::Module, path::Expr, keyword::String)
│      @ Base ./module.jl:60
│   [10] _eval_using
│      @ ./module.jl:137 [inlined]
│   [11] _eval_using(to::Module, path::Expr)
│      @ Base ./module.jl:137
│   [12] top-level scope
│      @ ~/.julia/packages/MultiAssayExperiments/VHg1a/src/MultiAssayExperiments.jl:4
│   [13] include(mod::Module, _path::String)
│      @ Base ./Base.jl:309
│   [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
│      @ Base ./loading.jl:3309
│   [15] top-level scope
│      @ stdin:5
│   [16] eval(m::Module, e::Any)
│      @ Core ./boot.jl:489
│   [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
│      @ Base ./loading.jl:3151
│   [18] include_string
│      @ ./loading.jl:3161 [inlined]
│   [19] exec_options(opts::Base.JLOptions)
│      @ Base ./client.jl:342
│   [20] _start()
│      @ Base ./client.jl:585
│  in expression starting at /home/pkgeval/.julia/packages/MultiAssayExperiments/VHg1a/src/MultiAssayExperiments.jl:1
│  in expression starting at stdin:5
└  

Estimating alpha diversity: Error During Test at /home/pkgeval/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:30
  Got exception outside of a @test
  LoadError: The following 5 packages failed to precompile:
  ReTest 
  Failed to precompile ReTest [e0db7c4e-2690-44b9-bad6-7687da720f89] to "/home/pkgeval/.julia/compiled/v1.14/ReTest/jl_59CTrc" (ProcessExited(1)).
  SummarizedExperiments 
  Failed to precompile SummarizedExperiments [b04b66ec-f619-4ebf-810e-cf5ccc546695] to "/home/pkgeval/.julia/compiled/v1.14/SummarizedExperiments/jl_4441CL" (ProcessExited(1)).
  Microbiome 
  Failed to precompile Microbiome [3bd8f0ae-a0f2-5238-a5af-e1b399a4940c] to "/home/pkgeval/.julia/compiled/v1.14/Microbiome/jl_bIizlP" (ProcessExited(1)).
  MicrobiomeAnalysis 
  Failed to precompile MicrobiomeAnalysis [09137a06-29c6-4e66-9476-ab7e4b8c7492] to "/home/pkgeval/.julia/compiled/v1.14/MicrobiomeAnalysis/jl_6twXmR" (ProcessExited(1)).
  MultiAssayExperiments 
  Failed to precompile MultiAssayExperiments [c9137f73-29f3-4436-b9da-846274f1d332] to "/home/pkgeval/.julia/compiled/v1.14/MultiAssayExperiments/jl_7hHUD6" (ProcessExited(1)).
  in expression starting at /home/pkgeval/.julia/packages/MicrobiomeAnalysis/fZGRE/test/test_alpha.jl:1
Test Summary:              | Error  Total     Time
Estimating alpha diversity |     1      1  2m52.7s
RNG of the outermost testset: Random.Xoshiro(0xb623a754c3571f66, 0x6346a2ab195ea07e, 0x98d1641c98c9de79, 0x435631a81ad124c3, 0xb369df7dc71c5a92)
ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/MicrobiomeAnalysis/fZGRE/test/runtests.jl:3

Testing failed after 178.97s

ERROR: LoadError: Package MicrobiomeAnalysis errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3067
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2916 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572
  [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548
  [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172
  [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161
  [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160
  [9] test
    @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined]
 [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String)
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159
 [11] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:237
 [12] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [13] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:344
 [14] _start()
    @ Base ./client.jl:585
in expression starting at /PkgEval.jl/scripts/evaluate.jl:228

PkgEval failed after 236.97s: package fails to precompile