Package evaluation to test CellularPotts on Julia 1.14.0-DEV.1414 (f2608a495e*) started at 2025-12-28T23:30:11.520 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 10.58s ################################################################################ # Installation # Installing CellularPotts... Resolving package versions... Installed Libuuid_jll ────────────────── v2.41.2+0 Installed HarfBuzz_jll ───────────────── v8.5.1+0 Installed libass_jll ─────────────────── v0.17.4+0 Installed libaom_jll ─────────────────── v3.13.1+0 Installed Bzip2_jll ──────────────────── v1.0.9+0 Installed Libtiff_jll ────────────────── v4.7.2+0 Installed Cairo_jll ──────────────────── v1.18.5+0 Installed Qt6Base_jll ────────────────── v6.8.2+2 Installed Xorg_libXinerama_jll ───────── v1.1.6+0 Installed Graphite2_jll ──────────────── v1.3.15+0 Installed PlotThemes ─────────────────── v3.3.0 Installed fzf_jll ────────────────────── v0.61.1+0 Installed NaNMath ────────────────────── v1.1.3 Installed libinput_jll ───────────────── v1.28.1+0 Installed Fontconfig_jll ─────────────── v2.17.1+0 Installed OrderedCollections ─────────── v1.8.1 Installed Opus_jll ───────────────────── v1.5.2+0 Installed Xorg_libxcb_jll ────────────── v1.17.1+0 Installed Tables ─────────────────────── v1.12.1 Installed Ogg_jll ────────────────────── v1.3.6+0 Installed LZO_jll ────────────────────── v2.10.3+0 Installed Reexport ───────────────────── v1.2.2 Installed Unzip ──────────────────────── v0.2.0 Installed Preferences ────────────────── v1.5.1 Installed Xorg_xcb_util_wm_jll ───────── v0.4.2+0 Installed FFMPEG ─────────────────────── v0.4.5 Installed Missings ───────────────────── v1.2.0 Installed LERC_jll ───────────────────── v4.0.1+0 Installed LLVMOpenMP_jll ─────────────── v18.1.8+0 Installed RegistryInstances ──────────── v0.1.0 Installed TableTraits ────────────────── v1.0.1 Installed SortingAlgorithms ──────────── v1.2.2 Installed LaTeXStrings ───────────────── v1.4.0 Installed Xorg_libICE_jll ────────────── v1.1.2+0 Installed eudev_jll ──────────────────── v3.2.14+0 Installed Grisu ──────────────────────── v1.0.2 Installed EpollShim_jll ──────────────── v0.0.20230411+1 Installed Crayons ────────────────────── v4.1.1 Installed Format ─────────────────────── v1.3.7 Installed OpenSSH_jll ────────────────── v10.2.1+0 Installed Inflate ────────────────────── v0.1.5 Installed DelimitedFiles ─────────────── v1.9.1 Installed AbstractTrees ──────────────── v0.4.5 Installed ArnoldiMethod ──────────────── v0.4.0 Installed MacroTools ─────────────────── v0.5.16 Installed DataStructures ─────────────── v0.19.3 Installed URIs ───────────────────────── v1.6.1 Installed Xorg_xcb_util_jll ──────────── v0.4.1+0 Installed x264_jll ───────────────────── v10164.0.1+0 Installed Xorg_libXau_jll ────────────── v1.0.13+0 Installed UnicodeFun ─────────────────── v0.4.1 Installed mtdev_jll ──────────────────── v1.1.7+0 Installed Xorg_libXfixes_jll ─────────── v6.0.2+0 Installed CodecZlib ──────────────────── v0.7.8 Installed StatsBase ──────────────────── v0.34.9 Installed Libffi_jll ─────────────────── v3.4.7+0 Installed DataValueInterfaces ────────── v1.0.0 Installed CEnum ──────────────────────── v0.5.0 Installed LoggingExtras ──────────────── v1.2.0 Installed StructUtils ────────────────── v2.6.0 Installed Qt6ShaderTools_jll ─────────── v6.8.2+1 Installed Pixman_jll ─────────────────── v0.44.2+0 Installed Expat_jll ──────────────────── v2.7.3+0 Installed IrrationalConstants ────────── v0.2.6 Installed libdecor_jll ───────────────── v0.2.2+0 Installed libpng_jll ─────────────────── v1.6.53+0 Installed Xorg_libXcursor_jll ────────── v1.2.4+0 Installed Contour ────────────────────── v0.6.3 Installed HTTP ───────────────────────── v1.10.19 Installed Xorg_xcb_util_keysyms_jll ──── v0.4.1+0 Installed StableRNGs ─────────────────── v1.0.4 Installed SimpleTraits ───────────────── v0.9.5 Installed ColorVectorSpace ───────────── v0.11.0 Installed BitFlags ───────────────────── v0.1.9 Installed libfdk_aac_jll ─────────────── v2.0.4+0 Installed FFMPEG_jll ─────────────────── v8.0.1+0 Installed Scratch ────────────────────── v1.3.0 Installed IOCapture ──────────────────── v1.0.0 Installed SimpleBufferStream ─────────── v1.2.0 Installed Qt6Declarative_jll ─────────── v6.8.2+1 Installed DocStringExtensions ────────── v0.9.5 Installed Ghostscript_jll ────────────── v9.55.1+0 Installed AliasTables ────────────────── v1.1.3 Installed JLFzf ──────────────────────── v0.1.11 Installed RelocatableFolders ─────────── v1.0.1 Installed IteratorInterfaceExtensions ── v1.0.0 Installed Plots ──────────────────────── v1.41.3 Installed ConcurrentUtilities ────────── v2.5.0 Installed RecipesBase ────────────────── v1.3.4 Installed Git_LFS_jll ────────────────── v3.7.0+0 Installed Xorg_libXi_jll ─────────────── v1.8.3+0 Installed DataAPI ────────────────────── v1.16.0 Installed libevdev_jll ───────────────── v1.13.4+0 Installed Wayland_jll ────────────────── v1.24.0+0 Installed Measures ───────────────────── v0.3.3 Installed Colors ─────────────────────── v0.13.1 Installed Xorg_libxkbfile_jll ────────── v1.1.3+0 Installed Libglvnd_jll ───────────────── v1.7.1+1 Installed StaticArraysCore ───────────── v1.4.4 Installed StaticArrays ───────────────── v1.9.15 Installed Latexify ───────────────────── v0.16.10 Installed Xorg_xkbcomp_jll ───────────── v1.4.7+0 Installed StringManipulation ─────────── v0.4.2 Installed ColorTypes ─────────────────── v0.12.1 Installed Requires ───────────────────── v1.3.1 Installed Glib_jll ───────────────────── v2.86.2+0 Installed LogExpFunctions ────────────── v0.3.29 Installed Vulkan_Loader_jll ──────────── v1.3.243+0 Installed ColorSchemes ───────────────── v3.31.0 Installed Xorg_xcb_util_cursor_jll ───── v0.1.6+0 Installed JSON ───────────────────────── v1.3.0 Installed Documenter ─────────────────── v1.16.1 Installed PrettyTables ───────────────── v2.4.0 Installed Git_jll ────────────────────── v2.52.0+0 Installed Xorg_xcb_util_renderutil_jll ─ v0.3.10+0 Installed Xorg_libXdmcp_jll ──────────── v1.1.6+0 Installed Parsers ────────────────────── v2.8.3 Installed Xorg_xkeyboard_config_jll ──── v2.44.0+0 Installed Xorg_libSM_jll ─────────────── v1.2.6+0 Installed JLLWrappers ────────────────── v1.7.1 Installed XZ_jll ─────────────────────── v5.8.1+0 Installed x265_jll ───────────────────── v4.1.0+0 Installed Pango_jll ──────────────────── v1.57.0+0 Installed GR_jll ─────────────────────── v0.73.19+1 Installed Xorg_xtrans_jll ────────────── v1.6.0+0 Installed RecipesPipeline ────────────── v0.6.12 Installed JpegTurbo_jll ──────────────── v3.1.4+0 Installed Dbus_jll ───────────────────── v1.16.2+0 Installed ExceptionUnwrapping ────────── v0.1.11 Installed Graphs ─────────────────────── v1.13.2 Installed Libmount_jll ───────────────── v2.41.2+0 Installed Xorg_libX11_jll ────────────── v1.8.12+0 Installed PlotUtils ──────────────────── v1.4.4 Installed Literate ───────────────────── v2.21.0 Installed TensorCore ─────────────────── v0.1.1 Installed TranscodingStreams ─────────── v0.11.3 Installed Statistics ─────────────────── v1.11.1 Installed StatsAPI ───────────────────── v1.8.0 Installed MbedTLS ────────────────────── v1.1.9 Installed MarkdownAST ────────────────── v0.1.2 Installed OffsetArrays ───────────────── v1.17.0 Installed OpenSSL ────────────────────── v1.6.1 Installed PrecompileTools ────────────── v1.3.3 Installed Xorg_xcb_util_image_jll ────── v0.4.1+0 Installed xkbcommon_jll ──────────────── v1.13.0+0 Installed GettextRuntime_jll ─────────── v0.22.4+0 Installed FriBidi_jll ────────────────── v1.0.17+0 Installed Metis ──────────────────────── v1.5.0 Installed GLFW_jll ───────────────────── v3.4.1+0 Installed LAME_jll ───────────────────── v3.100.3+0 Installed Xorg_libXrender_jll ────────── v0.9.12+0 Installed libvorbis_jll ──────────────── v1.3.8+0 Installed PtrArrays ──────────────────── v1.3.0 Installed CellularPotts ──────────────── v0.3.6 Installed Git ────────────────────────── v1.5.0 Installed LazilyInitializedFields ────── v1.3.0 Installed FixedPointNumbers ──────────── v0.8.5 Installed FreeType2_jll ──────────────── v2.13.4+0 Installed Libiconv_jll ───────────────── v1.18.0+0 Installed MbedTLS_jll ────────────────── v2.28.1010+0 Installed Showoff ────────────────────── v1.0.3 Installed Xorg_libXext_jll ───────────── v1.3.7+0 Installed METIS_jll ──────────────────── v5.1.3+0 Installed Xorg_libXrandr_jll ─────────── v1.5.5+0 Installed Qt6Wayland_jll ─────────────── v6.8.2+2 Installed ANSIColoredPrinters ────────── v0.0.1 Installed GR ─────────────────────────── v0.73.19 Installing 79 artifacts Installed artifact libvorbis 271.0 KiB Installed artifact libass 427.8 KiB Installed artifact xkbcommon 298.7 KiB Installed artifact Ogg 250.3 KiB Installed artifact Xorg_xcb_util_keysyms 17.8 KiB Installed artifact Xorg_xtrans 48.2 KiB Installed artifact METIS 1.1 MiB Installed artifact x264 2.1 MiB Installed artifact Xorg_xcb_util_renderutil 32.1 KiB Installed artifact Fontconfig 984.8 KiB Installed artifact Pixman 372.2 KiB Installed artifact libfdk_aac 2.8 MiB Installed artifact libinput 1.0 MiB Installed artifact Xorg_libXrandr 354.5 KiB Installed artifact libpng 329.0 KiB Installed artifact Qt6Wayland 2.2 MiB Installed artifact Xorg_xcb_util 39.5 KiB Installed artifact Xorg_xkbcomp 274.8 KiB Installed artifact x265 1.4 MiB Installed artifact libevdev 117.1 KiB Installed artifact Libuuid 3.7 MiB Installed artifact HarfBuzz 1.7 MiB Installed artifact Xorg_libXi 1.6 MiB Installed artifact Opus 925.5 KiB Installed artifact OpenSSH 4.3 MiB Installed artifact Xorg_libSM 164.1 KiB Installed artifact Xorg_xcb_util_cursor 27.6 KiB Installed artifact Libiconv 1.9 MiB Installed artifact Expat 283.3 KiB Installed artifact Wayland 390.6 KiB Installed artifact Graphite2 120.2 KiB Installed artifact Libglvnd 833.5 KiB Installed artifact GR 16.3 MiB Installed artifact Pango 2.0 MiB Installed artifact MbedTLS 2.2 MiB Installed artifact Xorg_xcb_util_image 54.3 KiB Installed artifact LLVMOpenMP 661.6 KiB Installed artifact Xorg_libXau 36.6 KiB Installed artifact Xorg_libxcb 2.1 MiB Installed artifact eudev 3.9 MiB Installed artifact mtdev 79.6 KiB Installed artifact GettextRuntime 543.0 KiB Installed artifact JpegTurbo 1.4 MiB Installed artifact Xorg_libXrender 435.9 KiB Installed artifact Xorg_xkeyboard_config 537.5 KiB Installed artifact Xorg_libXinerama 50.1 KiB Installed artifact Xorg_libICE 384.9 KiB Installed artifact Bzip2 503.5 KiB Installed artifact Git_LFS 9.6 MiB Installed artifact Xorg_libXdmcp 67.7 KiB Installed artifact Xorg_libxkbfile 486.7 KiB Installed artifact LERC 272.9 KiB Installed artifact Xorg_libX11 13.9 MiB Installed artifact Xorg_libXfixes 59.0 KiB Installed artifact Libmount 6.5 MiB Installed artifact Ghostscript 31.4 MiB Installed artifact libdecor 44.1 KiB Installed artifact FreeType2 1.5 MiB Installed artifact Cairo 2.2 MiB Installed artifact FriBidi 78.9 KiB Installed artifact Vulkan_Loader 177.3 KiB Installed artifact GLFW 180.1 KiB Installed artifact Glib 7.7 MiB Installed artifact fzf 3.3 MiB Installed artifact libaom 6.4 MiB Installed artifact Xorg_libXext 699.9 KiB Installed artifact Xorg_libXcursor 227.1 KiB Installed artifact Qt6Base 20.6 MiB Installed artifact Xorg_xcb_util_wm 147.9 KiB Installed artifact LZO 208.9 KiB Installed artifact Libffi 44.2 KiB Installed artifact LAME 292.5 KiB Installed artifact Dbus 489.8 KiB Installed artifact Qt6ShaderTools 2.1 MiB Installed artifact XZ 1.5 MiB Installed artifact Libtiff 2.3 MiB Installed artifact FFMPEG 11.7 MiB Installed artifact Qt6Declarative 21.6 MiB Installed artifact Git 49.3 MiB Updating `~/.julia/environments/v1.14/Project.toml` [11b7dee7] + CellularPotts v0.3.6 Updating `~/.julia/environments/v1.14/Manifest.toml` [a4c015fc] + ANSIColoredPrinters v0.0.1 [1520ce14] + AbstractTrees v0.4.5 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [d1d4a3ce] + BitFlags v0.1.9 [fa961155] + CEnum v0.5.0 [11b7dee7] + CellularPotts v0.3.6 [944b1d66] + CodecZlib v0.7.8 [35d6a980] + ColorSchemes v3.31.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [f0e56b4a] + ConcurrentUtilities v2.5.0 [d38c429a] + Contour v0.6.3 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [ffbed154] + DocStringExtensions v0.9.5 [e30172f5] + Documenter v1.16.1 [460bff9d] + ExceptionUnwrapping v0.1.11 [c87230d0] + FFMPEG v0.4.5 [53c48c17] + FixedPointNumbers v0.8.5 [1fa38f19] + Format v1.3.7 [28b8d3ca] + GR v0.73.19 [d7ba0133] + Git v1.5.0 [86223c79] + Graphs v1.13.2 [42e2da0e] + Grisu v1.0.2 [cd3eb016] + HTTP v1.10.19 [b5f81e59] + IOCapture v1.0.0 [d25df0c9] + Inflate v0.1.5 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [1019f520] + JLFzf v0.1.11 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v1.3.0 [b964fa9f] + LaTeXStrings v1.4.0 [23fbe1c1] + Latexify v0.16.10 [0e77f7df] + LazilyInitializedFields v1.3.0 [98b081ad] + Literate v2.21.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [1914dd2f] + MacroTools v0.5.16 [d0879d2d] + MarkdownAST v0.1.2 [739be429] + MbedTLS v1.1.9 [442fdcdd] + Measures v0.3.3 [2679e427] + Metis v1.5.0 [e1d29d7a] + Missings v1.2.0 [77ba4419] + NaNMath v1.1.3 [6fe1bfb0] + OffsetArrays v1.17.0 [4d8831e6] + OpenSSL v1.6.1 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [ccf2f8ad] + PlotThemes v3.3.0 [995b91a9] + PlotUtils v1.4.4 [91a5bcdd] + Plots v1.41.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 ⌅ [08abe8d2] + PrettyTables v2.4.0 [43287f4e] + PtrArrays v1.3.0 [3cdcf5f2] + RecipesBase v1.3.4 [01d81517] + RecipesPipeline v0.6.12 [189a3867] + Reexport v1.2.2 [2792f1a3] + RegistryInstances v0.1.0 [05181044] + RelocatableFolders v1.0.1 [ae029012] + Requires v1.3.1 [6c6a2e73] + Scratch v1.3.0 [992d4aef] + Showoff v1.0.3 [777ac1f9] + SimpleBufferStream v1.2.0 [699a6c99] + SimpleTraits v0.9.5 [a2af1166] + SortingAlgorithms v1.2.2 [860ef19b] + StableRNGs v1.0.4 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.9 [892a3eda] + StringManipulation v0.4.2 [ec057cc2] + StructUtils v2.6.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [62fd8b95] + TensorCore v0.1.1 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.6.1 [1cfade01] + UnicodeFun v0.4.1 [41fe7b60] + Unzip v0.2.0 [6e34b625] + Bzip2_jll v1.0.9+0 [83423d85] + Cairo_jll v1.18.5+0 [ee1fde0b] + Dbus_jll v1.16.2+0 [2702e6a9] + EpollShim_jll v0.0.20230411+1 [2e619515] + Expat_jll v2.7.3+0 [b22a6f82] + FFMPEG_jll v8.0.1+0 [a3f928ae] + Fontconfig_jll v2.17.1+0 [d7e528f0] + FreeType2_jll v2.13.4+0 [559328eb] + FriBidi_jll v1.0.17+0 [0656b61e] + GLFW_jll v3.4.1+0 [d2c73de3] + GR_jll v0.73.19+1 [b0724c58] + GettextRuntime_jll v0.22.4+0 [61579ee1] + Ghostscript_jll v9.55.1+0 [020c3dae] + Git_LFS_jll v3.7.0+0 [f8c6e375] + Git_jll v2.52.0+0 [7746bdde] + Glib_jll v2.86.2+0 [3b182d85] + Graphite2_jll v1.3.15+0 [2e76f6c2] + HarfBuzz_jll v8.5.1+0 [aacddb02] + JpegTurbo_jll v3.1.4+0 [c1c5ebd0] + LAME_jll v3.100.3+0 [88015f11] + LERC_jll v4.0.1+0 [1d63c593] + LLVMOpenMP_jll v18.1.8+0 [dd4b983a] + LZO_jll v2.10.3+0 ⌅ [e9f186c6] + Libffi_jll v3.4.7+0 [7e76a0d4] + Libglvnd_jll v1.7.1+1 [94ce4f54] + Libiconv_jll v1.18.0+0 [4b2f31a3] + Libmount_jll v2.41.2+0 [89763e89] + Libtiff_jll v4.7.2+0 [38a345b3] + Libuuid_jll v2.41.2+0 [d00139f3] + METIS_jll v5.1.3+0 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [e7412a2a] + Ogg_jll v1.3.6+0 [9bd350c2] + OpenSSH_jll v10.2.1+0 [91d4177d] + Opus_jll v1.5.2+0 [36c8627f] + Pango_jll v1.57.0+0 ⌅ [30392449] + Pixman_jll v0.44.2+0 [c0090381] + Qt6Base_jll v6.8.2+2 [629bc702] + Qt6Declarative_jll v6.8.2+1 [ce943373] + Qt6ShaderTools_jll v6.8.2+1 [e99dba38] + Qt6Wayland_jll v6.8.2+2 [a44049a8] + Vulkan_Loader_jll v1.3.243+0 [a2964d1f] + Wayland_jll v1.24.0+0 [ffd25f8a] + XZ_jll v5.8.1+0 [f67eecfb] + Xorg_libICE_jll v1.1.2+0 [c834827a] + Xorg_libSM_jll v1.2.6+0 [4f6342f7] + Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0 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To see why use `status --outdated -m` Installation completed after 34.62s ################################################################################ # Precompilation # ERROR: LoadError: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Nothing) The function `setindex!` exists, but no method is defined for this combination of argument types. Stacktrace: [1] top-level scope @ /PkgEval.jl/scripts/precompile.jl:10 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [4] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/precompile.jl:6 caused by: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Base.DevNull) The function `setindex!` exists, but no method is defined for this combination of argument types. Stacktrace: [1] top-level scope @ /PkgEval.jl/scripts/precompile.jl:7 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [4] _start() @ Base ./client.jl:577 Precompilation failed after 12.54s ################################################################################ # Testing # Testing CellularPotts Status `/tmp/jl_dBgpoq/Project.toml` [6e4b80f9] BenchmarkTools v1.6.3 [11b7dee7] CellularPotts v0.3.6 [35d6a980] ColorSchemes v3.31.0 [5ae59095] Colors v0.13.1 [0c46a032] DifferentialEquations v7.17.0 [e30172f5] Documenter v1.16.1 [86223c79] Graphs v1.13.2 [98b081ad] Literate v2.21.0 [2679e427] Metis v1.5.0 [6fe1bfb0] OffsetArrays v1.17.0 [91a5bcdd] Plots v1.41.3 ⌅ [08abe8d2] PrettyTables v2.4.0 [10745b16] Statistics v1.11.1 [2913bbd2] StatsBase v0.34.9 [37e2e46d] LinearAlgebra v1.13.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.13.0 [8dfed614] Test v1.11.0 Status 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ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [9abbd945] Profile v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.17.0+0 [e37daf67] LibGit2_jll v1.9.2+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Test Summary: | Pass Total Time Spaces or graphs, who's to say? | 3 3 3.2s Test Summary: | Pass Total Time Periodic grids | 8 8 0.1s Test Summary: | Pass Total Time Neighborhoods | 2 2 0.0s Test Summary: | Pass Total Time Lonely cells | 2 2 5.5s Test Summary: | Pass Total Time Testing positions keyword | 2 2 1.1s Test Summary: | Pass Total Time Adding Cell Properties | 6 6 1.0s Test Summary: | Pass Total Time Add/Delete Cells | 2 2 0.3s Test Summary: | Pass Total Time Penalty tests | 1 1 0.8s Test Summary: | Pass Total Time General Fragment Test | 1 1 2.5s Test Summary: | Pass Total Time Euler Characteristic | 2 2 1.3s Test Summary: | Pass Total Time Show me the CPM | 1 1 0.4s Test Summary: | Pass Total Time Hello World | 1 1 2.2s Test Summary: | Pass Total Time Going 3D | 1 1 2.9s Test Summary: | Pass Total Time Lets Get Moving | 1 1 3.1s Test Summary: | Pass Total Time OnPatrol | 1 1 9.6s Test Summary: | Pass Total Time Over Here | 1 1 1.9s  Downloading artifact: IntelOpenMP  Downloading artifact: oneTBB 1 dependency had output during precompilation: ┌ MKL_jll │ Downloading artifact: IntelOpenMP │ Downloading artifact: oneTBB └ ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 424 running 1 of 1 signal (10): User defined signal 1 gc_mark_obj8 at /source/src/gc-stock.c:1723 gc_mark_outrefs at /source/src/gc-stock.c:2486 [inlined] gc_mark_and_steal at /source/src/gc-stock.c:2568 _jl_gc_collect at /source/src/gc-stock.c:3088 ijl_gc_collect at /source/src/gc-stock.c:3510 maybe_collect at /source/src/gc-stock.c:356 [inlined] jl_gc_small_alloc_inner at /source/src/gc-stock.c:733 jl_gc_small_alloc_noinline at /source/src/gc-stock.c:791 [inlined] jl_gc_alloc_ at /source/src/gc-stock.c:805 jl_typemap_alloc at /source/src/typemap.c:1498 jl_method_table_add at /source/src/gf.c:2702 jl_add_methods at /source/src/staticdata_utils.c:871 [inlined] jl_restore_system_image_from_stream_ at /source/src/staticdata.c:4310 jl_restore_package_image_from_stream at /source/src/staticdata.c:4384 ijl_restore_incremental at /source/src/staticdata.c:4462 #_include_from_serialized#885 at ./loading.jl:1440 _include_from_serialized at ./loading.jl:1412 [inlined] #_require_search_from_serialized#902 at ./loading.jl:2287 _require_search_from_serialized at ./loading.jl:2181 [inlined] _tryrequire_from_serialized at ./loading.jl:2124 _tryrequire_from_serialized at ./loading.jl:2168 __require_prelocked at ./loading.jl:2921 _require_prelocked at ./loading.jl:2697 macro expansion at ./loading.jl:2625 [inlined] macro expansion at ./lock.jl:376 [inlined] __require at ./loading.jl:2589 jfptr___require_58556.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] jl_f_invoke_in_world at /source/src/builtins.c:908 require at ./loading.jl:2565 [inlined] eval_import_path at ./module.jl:36 [inlined] eval_import_path_all at ./module.jl:60 _eval_using at ./module.jl:137 [inlined] _eval_using at ./module.jl:137 jfptr__eval_using_51320.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:679 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 jl_toplevel_eval_flex at /source/src/toplevel.c:757 jl_eval_toplevel_stmts at /source/src/toplevel.c:600 jl_toplevel_eval_flex at /source/src/toplevel.c:698 ijl_toplevel_eval at /source/src/toplevel.c:769 ijl_toplevel_eval_in at /source/src/toplevel.c:814 eval at ./boot.jl:489 include_string at ./loading.jl:3124 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _include at ./loading.jl:3184 include at ./Base.jl:310 IncludeInto at ./Base.jl:312 unknown function (ip: 0x7f9745101cb9) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:679 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 jl_toplevel_eval_flex at /source/src/toplevel.c:757 jl_eval_toplevel_stmts at /source/src/toplevel.c:600 jl_toplevel_eval_flex at /source/src/toplevel.c:698 ijl_toplevel_eval at /source/src/toplevel.c:769 ijl_toplevel_eval_in at /source/src/toplevel.c:814 eval at ./boot.jl:489 include_string at ./loading.jl:3124 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _include at ./loading.jl:3184 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_60564.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:679 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 jl_toplevel_eval_flex at /source/src/toplevel.c:757 jl_eval_toplevel_stmts at /source/src/toplevel.c:600 jl_toplevel_eval_flex at /source/src/toplevel.c:698 ijl_toplevel_eval at /source/src/toplevel.c:769 ijl_toplevel_eval_in at /source/src/toplevel.c:814 eval at ./boot.jl:489 exec_options at ./client.jl:310 _start at ./client.jl:577 jfptr__start_67340.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7f9767341249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1246 wait_forever at ./task.jl:1168 jfptr_wait_forever_50734.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] start_task at /source/src/task.c:1272 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x0000711297483df0 Total snapshots: 514. Utilization: 0% ╎514 @Base/task.jl:1168 wait_forever() 513╎ 514 @Base/task.jl:1246 wait() [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:228 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1246 wait_forever at ./task.jl:1168 jfptr_wait_forever_50734.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] start_task at /source/src/task.c:1272 unknown function (ip: (nil)) at (unknown file) Allocations: 29410634 (Pool: 29409084; Big: 1550); GC: 45 [424] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/CellularPotts/EuGHg/docs/src/ExampleGallery/BringingODEsToLife/BringingODEsToLife.jl:6 egal_types at /source/src/builtins.c:174 egal_types at /source/src/builtins.c:185 ijl_types_equal at /source/src/subtype.c:2326 jl_specializations_get_linfo_ at /source/src/gf.c:236 jl_restore_system_image_from_stream_ at /source/src/staticdata.c:4130 jl_restore_package_image_from_stream at /source/src/staticdata.c:4384 ijl_restore_incremental at /source/src/staticdata.c:4462 #_include_from_serialized#885 at ./loading.jl:1440 _include_from_serialized at ./loading.jl:1412 [inlined] #_require_search_from_serialized#902 at ./loading.jl:2287 _require_search_from_serialized at ./loading.jl:2181 [inlined] _tryrequire_from_serialized at ./loading.jl:2124 _tryrequire_from_serialized at ./loading.jl:2168 __require_prelocked at ./loading.jl:2921 _require_prelocked at ./loading.jl:2697 macro expansion at ./loading.jl:2625 [inlined] macro expansion at ./lock.jl:376 [inlined] __require at ./loading.jl:2589 jfptr___require_58556.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] jl_f_invoke_in_world at /source/src/builtins.c:908 require at ./loading.jl:2565 [inlined] eval_import_path at ./module.jl:36 [inlined] eval_import_path_all at ./module.jl:60 _eval_using at ./module.jl:137 [inlined] _eval_using at ./module.jl:137 jfptr__eval_using_51320.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:679 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 jl_toplevel_eval_flex at /source/src/toplevel.c:757 jl_eval_toplevel_stmts at /source/src/toplevel.c:600 jl_toplevel_eval_flex at /source/src/toplevel.c:698 ijl_toplevel_eval at /source/src/toplevel.c:769 ijl_toplevel_eval_in at /source/src/toplevel.c:814 eval at ./boot.jl:489 include_string at ./loading.jl:3124 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _include at ./loading.jl:3184 include at ./Base.jl:310 IncludeInto at ./Base.jl:312 unknown function (ip: 0x7f9745101cb9) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:679 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 jl_toplevel_eval_flex at /source/src/toplevel.c:757 jl_eval_toplevel_stmts at /source/src/toplevel.c:600 jl_toplevel_eval_flex at /source/src/toplevel.c:698 ijl_toplevel_eval at /source/src/toplevel.c:769 ijl_toplevel_eval_in at /source/src/toplevel.c:814 eval at ./boot.jl:489 include_string at ./loading.jl:3124 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _include at ./loading.jl:3184 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_60564.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:679 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 jl_toplevel_eval_flex at /source/src/toplevel.c:757 jl_eval_toplevel_stmts at /source/src/toplevel.c:600 jl_toplevel_eval_flex at /source/src/toplevel.c:698 ijl_toplevel_eval at /source/src/toplevel.c:769 ijl_toplevel_eval_in at /source/src/toplevel.c:814 eval at ./boot.jl:489 exec_options at ./client.jl:310 _start at ./client.jl:577 jfptr__start_67340.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2285 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7f9767341249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 43160067 (Pool: 43157133; Big: 2934); GC: 60 PkgEval terminated after 2724.69s: test duration exceeded the time limit