Package evaluation to test ACEfit on Julia 1.14.0-DEV.1420 (3d611fddcf*) started at 2025-12-28T20:07:48.851 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 8.5s ################################################################################ # Installation # Installing ACEfit... Resolving package versions... Installed LowRankMatrices ───────────── v1.0.2 Installed DiffResults ───────────────── v1.1.0 Installed InlineStrings ─────────────── v1.4.5 Installed Adapt ─────────────────────── v4.4.0 Installed FillArrays ────────────────── v1.15.0 Installed MacroTools ────────────────── v0.5.16 Installed DataStructures ────────────── v0.19.3 Installed ForwardDiff ───────────────── v1.3.0 Installed MKL_jll ───────────────────── v2025.2.0+0 Installed oneTBB_jll ────────────────── v2022.0.0+1 Installed ConstructionBase ──────────── v1.6.0 Installed AliasTables ───────────────── v1.1.3 Installed ExprTools ─────────────────── v0.1.10 Installed ArrayInterface ────────────── v7.22.0 Installed StatsBase ─────────────────── v0.34.9 Installed OrderedCollections ────────── v1.8.1 Installed Compat ────────────────────── v4.18.1 Installed RecipesBase ───────────────── v1.3.4 Installed DataAPI ───────────────────── v1.16.0 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed Optim ─────────────────────── v1.13.3 Installed PositiveFactorizations ────── v0.2.4 Installed Statistics ────────────────── v1.11.1 Installed IntelOpenMP_jll ───────────── v2025.2.0+0 Installed InvertedIndices ───────────── v1.3.1 Installed StatsAPI ──────────────────── v1.8.0 Installed Nullables ─────────────────── v1.0.0 Installed TimerOutputs ──────────────── v0.5.29 Installed PrecompileTools ───────────── v1.3.3 Installed DataValueInterfaces ───────── v1.0.0 Installed SentinelArrays ────────────── v1.4.9 Installed ProgressMeter ─────────────── v1.11.0 Installed IrrationalConstants ───────── v0.2.6 Installed StaticArraysCore ──────────── v1.4.4 Installed CommonSubexpressions ──────── v0.3.1 Installed LinearOperators ───────────── v2.11.0 Installed StaticArrays ──────────────── v1.9.15 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed NaNMath ───────────────────── v1.1.3 Installed Requires ──────────────────── v1.3.1 Installed AbstractFFTs ──────────────── v1.5.0 Installed StringManipulation ────────── v0.4.2 Installed LogExpFunctions ───────────── v0.3.29 Installed ActiveSetPursuit ──────────── v0.0.4 Installed DiffRules ─────────────────── v1.15.1 Installed FastClosures ──────────────── v0.3.2 Installed FiniteDiff ────────────────── v2.29.0 Installed Tables ────────────────────── v1.12.1 Installed ParallelDataTransfer ──────── v0.5.1 Installed ACEfit ────────────────────── v0.3.0 Installed PrettyTables ──────────────── v3.1.2 Installed PtrArrays ─────────────────── v1.3.0 Installed EnumX ─────────────────────── v1.0.5 Installed DataFrames ────────────────── v1.8.1 Installed Reexport ──────────────────── v1.2.2 Installed SpecialFunctions ──────────── v2.6.1 Installed Setfield ──────────────────── v1.1.2 Installed Missings ──────────────────── v1.2.0 Installed LowRankApprox ─────────────── v0.5.5 Installed NLSolversBase ─────────────── v7.10.0 Installed Preferences ───────────────── v1.5.1 Installed IterativeSolvers ──────────── v0.9.4 Installed PooledArrays ──────────────── v1.4.3 Installed FFTW_jll ──────────────────── v3.3.11+0 Installed LaTeXStrings ──────────────── v1.4.0 Installed JLLWrappers ───────────────── v1.7.1 Installed TableTraits ───────────────── v1.0.1 Installed LineSearches ──────────────── v7.5.1 Installed Crayons ───────────────────── v4.1.1 Installed SortingAlgorithms ─────────── v1.2.2 Installed ADTypes ───────────────────── v1.20.0 Installed FFTW ──────────────────────── v1.10.0 Installed DocStringExtensions ───────── v0.9.5 Installed QRupdate ──────────────────── v1.0.1 Installed DifferentiationInterface ──── v0.7.13 Installing 2 artifacts Installed artifact OpenSpecFun 194.9 KiB Installed artifact FFTW 2.2 MiB Updating `~/.julia/environments/v1.14/Project.toml` [ad31a8ef] + ACEfit v0.3.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [ad31a8ef] + ACEfit v0.3.0 [47edcb42] + ADTypes v1.20.0 [621f4979] + AbstractFFTs v1.5.0 [d86c1dc8] + ActiveSetPursuit v0.0.4 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.22.0 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.18.1 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.13 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [e2ba6199] + ExprTools v0.1.10 [7a1cc6ca] + FFTW v1.10.0 [9aa1b823] + FastClosures v0.3.2 [1a297f60] + FillArrays v1.15.0 [6a86dc24] + FiniteDiff v2.29.0 [f6369f11] + ForwardDiff v1.3.0 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [42fd0dbc] + IterativeSolvers v0.9.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [b964fa9f] + LaTeXStrings v1.4.0 [d3d80556] + LineSearches v7.5.1 [5c8ed15e] + LinearOperators v2.11.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [898213cb] + LowRankApprox v0.5.5 [e65ccdef] + LowRankMatrices v1.0.2 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [4d1e1d77] + Nullables v1.0.0 [429524aa] + Optim v1.13.3 [bac558e1] + OrderedCollections v1.8.1 [2dcacdae] + ParallelDataTransfer v0.5.1 [2dfb63ee] + PooledArrays v1.4.3 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [08abe8d2] + PrettyTables v3.1.2 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [29d2ae51] + QRupdate v1.0.1 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [91c51154] + SentinelArrays v1.4.9 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.9 [892a3eda] + StringManipulation v0.4.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [a759f4b9] + TimerOutputs v0.5.29 [f5851436] + FFTW_jll v3.3.11+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [856f044c] + MKL_jll v2025.2.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.17.0+0 [e37daf67] + LibGit2_jll v1.9.2+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.12.2 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Installation completed after 7.71s ################################################################################ # Precompilation # ERROR: LoadError: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Nothing) The function `setindex!` exists, but no method is defined for this combination of argument types. Stacktrace: [1] top-level scope @ /PkgEval.jl/scripts/precompile.jl:10 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [4] _start() @ Base ./client.jl:585 in expression starting at /PkgEval.jl/scripts/precompile.jl:6 caused by: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Base.DevNull) The function `setindex!` exists, but no method is defined for this combination of argument types. Stacktrace: [1] top-level scope @ /PkgEval.jl/scripts/precompile.jl:7 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [4] _start() @ Base ./client.jl:585 Precompilation failed after 10.75s ################################################################################ # Testing # Testing ACEfit Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Installed UnsafePointers ─────────── v1.0.0 Installed Distances ──────────────── v0.10.12 Installed UnPack ─────────────────── v1.0.2 Installed URIs ───────────────────── v1.6.1 Installed ARFFFiles ──────────────── v1.5.0 Installed QuadGK ─────────────────── v2.11.2 Installed Pidfile ────────────────── v1.3.0 Installed CondaPkg ───────────────── v0.2.33 Installed DelimitedFiles ─────────── v1.9.1 Installed micromamba_jll ─────────── v1.5.12+0 Installed CodecZlib ──────────────── v0.7.8 Installed StableRNGs ─────────────── v1.0.4 Installed LoggingExtras ──────────── v1.2.0 Installed BitFlags ───────────────── v0.1.9 Installed pixi_jll ───────────────── v0.41.3+0 Installed SimpleBufferStream ─────── v1.2.0 Installed HTTP ───────────────────── v1.10.19 Installed MLJEnsembles ───────────── v0.3.3 Installed PDMats ─────────────────── v0.11.37 Installed MLJTuning ──────────────── v0.7.4 Installed Scratch ────────────────── v1.3.0 Installed OpenML ─────────────────── v0.3.3 Installed Rmath_jll ──────────────── v0.5.1+0 Installed ConcurrentUtilities ────── v2.5.0 Installed Combinatorics ──────────── v1.1.0 Installed RelocatableFolders ─────── v1.0.1 Installed PrettyPrinting ─────────── v0.4.2 Installed ScientificTypes ────────── v3.1.1 Installed PythonCall ─────────────── v0.9.31 Installed ColorTypes ─────────────── v0.12.1 Installed JSON ───────────────────── v0.21.4 Installed EarlyStopping ──────────── v0.3.0 Installed PrettyTables ───────────── v2.4.0 Installed CategoricalDistributions ─ v0.1.15 Installed Rmath ──────────────────── v0.9.0 Installed Parsers ────────────────── v2.8.3 Installed MLJLinearModels ────────── v0.9.2 Installed LossFunctions ──────────── v0.11.2 Installed Distributions ──────────── v0.25.122 Installed MLJBase ────────────────── v0.21.14 Installed StructTypes ────────────── v1.11.0 Installed StatsFuns ──────────────── v1.5.2 Installed StatisticalTraits ──────── v3.5.0 Installed FilePathsBase ──────────── v0.9.24 Installed CategoricalArrays ──────── v0.10.8 Installed MLJModels ──────────────── v0.16.17 Installed HypergeometricFunctions ── v0.3.28 Installed ExceptionUnwrapping ────── v0.1.11 Installed MLJ ────────────────────── v0.19.5 Installed LinearMaps ─────────────── v3.11.4 Installed IterationControl ───────── v0.5.4 Installed TranscodingStreams ─────── v0.11.3 Installed MicroMamba ─────────────── v0.1.14 Installed ComputationalResources ─── v0.3.2 Installed MbedTLS ────────────────── v1.1.9 Installed JSON3 ──────────────────── v1.14.3 Installed OpenSSL ────────────────── v1.6.1 Installed MLFlowClient ───────────── v0.4.7 Installed FixedPointNumbers ──────── v0.8.5 Installed ScientificTypesBase ────── v3.0.0 Installed MLJIteration ───────────── v0.5.1 Installed MLJFlow ────────────────── v0.1.1 Installed MLJScikitLearnInterface ── v0.7.0 Installed MLJModelInterface ──────── v1.12.1 Installed Parameters ─────────────── v0.12.3 Installed ShowCases ──────────────── v0.1.0 Installed MbedTLS_jll ────────────── v2.28.1010+0 Installed LatinHypercubeSampling ─── v1.9.0 Installing 2 artifacts Installed artifact Rmath 121.9 KiB Installed artifact MbedTLS 2.2 MiB Updating `/tmp/jl_PaUQgz/Project.toml` [ad31a8ef] + ACEfit v0.3.0 ⌃ [add582a8] + MLJ v0.19.5 ⌃ [6ee0df7b] + MLJLinearModels v0.9.2 [5ae90465] + MLJScikitLearnInterface v0.7.0 [6099a3de] + PythonCall v0.9.31 [8dfed614] ~ Test ⇒ v1.11.0 Updating `/tmp/jl_PaUQgz/Manifest.toml` [ad31a8ef] + ACEfit v0.3.0 [47edcb42] + ADTypes v1.20.0 ⌃ [da404889] + ARFFFiles v1.5.0 [621f4979] + AbstractFFTs v1.5.0 [d86c1dc8] + ActiveSetPursuit v0.0.4 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.22.0 [d1d4a3ce] + BitFlags v0.1.9 ⌅ [324d7699] + CategoricalArrays v0.10.8 ⌅ [af321ab8] + CategoricalDistributions v0.1.15 [944b1d66] + CodecZlib v0.7.8 [3da002f7] + ColorTypes v0.12.1 [861a8166] + Combinatorics v1.1.0 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.18.1 [ed09eef8] + ComputationalResources v0.3.2 [f0e56b4a] + ConcurrentUtilities v2.5.0 [992eb4ea] + CondaPkg v0.2.33 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.13 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.122 [ffbed154] + DocStringExtensions v0.9.5 [792122b4] + EarlyStopping v0.3.0 [4e289a0a] + EnumX v1.0.5 [460bff9d] + ExceptionUnwrapping v0.1.11 [e2ba6199] + ExprTools v0.1.10 [7a1cc6ca] + FFTW v1.10.0 [9aa1b823] + FastClosures v0.3.2 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.15.0 [6a86dc24] + FiniteDiff v2.29.0 [53c48c17] + FixedPointNumbers v0.8.5 [f6369f11] + ForwardDiff v1.3.0 [cd3eb016] + HTTP v1.10.19 [34004b35] + HypergeometricFunctions v0.3.28 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [b3c1a2ee] + IterationControl v0.5.4 [42fd0dbc] + IterativeSolvers v0.9.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [0f8b85d8] + JSON3 v1.14.3 [b964fa9f] + LaTeXStrings v1.4.0 [a5e1c1ea] + LatinHypercubeSampling v1.9.0 [d3d80556] + LineSearches v7.5.1 [7a12625a] + LinearMaps v3.11.4 [5c8ed15e] + LinearOperators v2.11.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 ⌅ [30fc2ffe] + LossFunctions v0.11.2 [898213cb] + LowRankApprox v0.5.5 [e65ccdef] + LowRankMatrices v1.0.2 ⌅ [64a0f543] + MLFlowClient v0.4.7 ⌃ [add582a8] + MLJ v0.19.5 ⌅ [a7f614a8] + MLJBase v0.21.14 ⌅ [50ed68f4] + MLJEnsembles v0.3.3 ⌅ [7b7b8358] + MLJFlow v0.1.1 ⌅ [614be32b] + MLJIteration v0.5.1 ⌃ [6ee0df7b] + MLJLinearModels v0.9.2 [e80e1ace] + MLJModelInterface v1.12.1 ⌅ [d491faf4] + MLJModels v0.16.17 [5ae90465] + MLJScikitLearnInterface v0.7.0 ⌅ [03970b2e] + MLJTuning v0.7.4 [1914dd2f] + MacroTools v0.5.16 [739be429] + MbedTLS v1.1.9 [0b3b1443] + MicroMamba v0.1.14 [e1d29d7a] + Missings v1.2.0 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [4d1e1d77] + Nullables v1.0.0 [8b6db2d4] + OpenML v0.3.3 [4d8831e6] + OpenSSL v1.6.1 [429524aa] + Optim v1.13.3 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 [2dcacdae] + ParallelDataTransfer v0.5.1 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [fa939f87] + Pidfile v1.3.0 [2dfb63ee] + PooledArrays v1.4.3 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [54e16d92] + PrettyPrinting v0.4.2 ⌅ [08abe8d2] + PrettyTables v2.4.0 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [6099a3de] + PythonCall v0.9.31 [29d2ae51] + QRupdate v1.0.1 [1fd47b50] + QuadGK v2.11.2 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [05181044] + RelocatableFolders v1.0.1 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 ⌃ [321657f4] + ScientificTypes v3.1.1 [30f210dd] + ScientificTypesBase v3.0.0 [6c6a2e73] + Scratch v1.3.0 [91c51154] + SentinelArrays v1.4.9 [efcf1570] + Setfield v1.1.2 [605ecd9f] + ShowCases v0.1.0 [777ac1f9] + SimpleBufferStream v1.2.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [860ef19b] + StableRNGs v1.0.4 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [64bff920] + StatisticalTraits v3.5.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.9 [4c63d2b9] + StatsFuns v1.5.2 [892a3eda] + StringManipulation v0.4.2 [856f2bd8] + StructTypes v1.11.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [a759f4b9] + TimerOutputs v0.5.29 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [e17b2a0c] + UnsafePointers v1.0.0 [f5851436] + FFTW_jll v3.3.11+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 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[4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] ~ Test ⇒ v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [deac9b47] + LibCURL_jll v8.17.0+0 [e37daf67] + LibGit2_jll v1.9.2+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.12.2 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_PaUQgz/Project.toml` [ad31a8ef] ACEfit v0.3.0 ⌃ [add582a8] MLJ v0.19.5 ⌃ [6ee0df7b] MLJLinearModels v0.9.2 [5ae90465] MLJScikitLearnInterface v0.7.0 [6099a3de] PythonCall v0.9.31 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_PaUQgz/Manifest.toml` [ad31a8ef] ACEfit v0.3.0 [47edcb42] ADTypes v1.20.0 ⌃ [da404889] ARFFFiles v1.5.0 [621f4979] AbstractFFTs v1.5.0 [d86c1dc8] ActiveSetPursuit v0.0.4 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [4fba245c] ArrayInterface v7.22.0 [d1d4a3ce] BitFlags v0.1.9 ⌅ [324d7699] CategoricalArrays v0.10.8 ⌅ [af321ab8] CategoricalDistributions v0.1.15 [944b1d66] CodecZlib v0.7.8 [3da002f7] ColorTypes v0.12.1 [861a8166] Combinatorics v1.1.0 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [ed09eef8] ComputationalResources v0.3.2 [f0e56b4a] ConcurrentUtilities v2.5.0 [992eb4ea] CondaPkg v0.2.33 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Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.17.0+0 [e37daf67] LibGit2_jll v1.9.2+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests...  Downloading artifact: IntelOpenMP  Downloading artifact: oneTBB WARNING: Constructor for type "Array" was extended in `LowRankApprox` without explicit qualification or import.  NOTE: Assumed "Array" refers to `Base.Array`. This behavior is deprecated and may differ in future versions.  NOTE: This behavior may have differed in Julia versions prior to 1.12.  Hint: If you intended to create a new generic function of the same name, use `function Array end`.  Hint: To silence the warning, qualify `Array` as `Base.Array` in the method signature or explicitly `import Base: Array`. 2 dependencies had output during precompilation: ┌ LowRankApprox │ WARNING: Constructor for type "Array" was extended in `LowRankApprox` without explicit qualification or import. │ NOTE: Assumed "Array" refers to `Base.Array`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Array end`. │ Hint: To silence the warning, qualify `Array` as `Base.Array` in the method signature or explicitly `import Base: Array`. └ ┌ MKL_jll │ Downloading artifact: IntelOpenMP │ Downloading artifact: oneTBB └ [ Info: Test committee creation with bayesian_ridge_regression_svd. ┌ Warning: Why is such a large committee required? └ @ Main ~/.julia/packages/ACEfit/IRtHL/test/test_bayesianlinear.jl:8 [ Info: Entering bayesian_linear_regression_svd ┌ Info: Computing SVD of (3, 3) matrix │ BLAS.get_num_threads() = 1 │ BLAS.get_config() = │ LinearAlgebra.BLAS.LBTConfig │ Libraries: └ └ [ILP64] libopenblas64_.so [ Info: SVD completed after 0.00030629751666666667 minutes [ Info: Beginning to maximize marginal likelihood ┌ Warning: x_tol is deprecated. Use x_abstol or x_reltol instead. The provided value (1.0e-8) will be used as x_abstol. └ @ Optim ~/.julia/packages/Optim/gmigl/src/types.jl:110 ┌ Info: Optimization complete │ Results = │ * Status: success │ │ * Candidate solution │ Final objective value: 4.244509e+00 │ │ * Found with │ Algorithm: L-BFGS │ │ * Convergence measures │ |x - x'| = 2.29e-09 ≤ 1.0e-08 │ |x - x'|/|x'| = 2.42e-09 ≰ 0.0e+00 │ |f(x) - f(x')| = 0.00e+00 ≤ 0.0e+00 │ |f(x) - f(x')|/|f(x')| = 0.00e+00 ≤ 0.0e+00 │ |g(x)| = 8.72e-15 ≰ 0.0e+00 │ │ * Work counters │ Seconds run: 0 (vs limit Inf) │ Iterations: 10 │ f(x) calls: 26 │ ∇f(x) calls: 26 └ [ Info: Test error from invalid committee request.  Downloading artifact: micromamba  Downloading artifact: pixi 2 dependencies had output during precompilation: ┌ MicroMamba │ Downloading artifact: micromamba └ ┌ CondaPkg │ Downloading artifact: pixi └ Linear Solvers: Error During Test at /home/pkgeval/.julia/packages/ACEfit/IRtHL/test/runtests.jl:9 Got exception outside of a @test LoadError: InitError: UndefVarError: `manifest_uuid_path` not defined in `Base` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] getproperty(x::Module, f::Symbol) @ Base ./Base_compiler.jl:50 [2] _resolve_top_env(load_path::Any) @ CondaPkg ~/.julia/packages/CondaPkg/0UqYV/src/resolve.jl:10 [3] resolve(; force::Bool, io::IO, interactive::Bool, dry_run::Bool) @ CondaPkg ~/.julia/packages/CondaPkg/0UqYV/src/resolve.jl:823 [4] resolve() @ CondaPkg ~/.julia/packages/CondaPkg/0UqYV/src/resolve.jl:796 [5] envdir() @ CondaPkg ~/.julia/packages/CondaPkg/0UqYV/src/env.jl:70 [6] init_context() @ PythonCall.C ~/.julia/packages/PythonCall/83z4q/src/C/context.jl:135 [7] __init__() @ PythonCall.C ~/.julia/packages/PythonCall/83z4q/src/C/C.jl:26 [8] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1606 [9] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1594 [10] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}; register::Bool) @ Base ./loading.jl:1482 [11] _include_from_serialized @ ./loading.jl:1439 [inlined] [12] _tryrequire_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing) @ Base ./loading.jl:2202 [13] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2947 [14] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2724 [15] macro expansion @ ./loading.jl:2652 [inlined] [16] macro expansion @ ./lock.jl:376 [inlined] [17] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2616 [18] require @ ./loading.jl:2592 [inlined] [19] eval_import_path @ ./module.jl:36 [inlined] [20] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [21] _eval_using @ ./module.jl:137 [inlined] [22] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [23] top-level scope @ ~/.julia/packages/ACEfit/IRtHL/test/test_linearsolvers.jl:2 [24] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [25] top-level scope @ ~/.julia/packages/ACEfit/IRtHL/test/runtests.jl:5 [26] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [27] macro expansion @ ~/.julia/packages/ACEfit/IRtHL/test/runtests.jl:9 [inlined] [28] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [29] macro expansion @ ~/.julia/packages/ACEfit/IRtHL/test/runtests.jl:9 [inlined] [30] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [31] top-level scope @ none:6 [32] eval(m::Module, e::Any) @ Core ./boot.jl:489 [33] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [34] _start() @ Base ./client.jl:585 during initialization of module C in expression starting at /home/pkgeval/.julia/packages/ACEfit/IRtHL/test/test_linearsolvers.jl:2 [ Info: Test Solver on overdetermined system Test PassedTest PassedTest PassedTest PassedTest PassedTest Passedselect = :final [ Info: ASP: tsvd made improvements! [ Info: ASP (val): tsvd made improvements! select = (:byerror, 1.3) [ Info: ASP: tsvd made improvements! [ Info: ASP (val): tsvd made improvements! select = (:bysize, 73) [ Info: ASP: tsvd made improvements! [ Info: ASP (val): tsvd made improvements! select = :final [ Info: OMP: tsvd made improvements! [ Info: OMP (val): tsvd made improvements! select = (:byerror, 1.3) [ Info: OMP: tsvd made improvements! [ Info: OMP (val): tsvd made improvements! select = (:bysize, 73) ┌ Warning: OMP: tsvd did NOT make any improvements! └ @ Main ~/.julia/packages/ACEfit/IRtHL/test/test_asp.jl:115 ┌ Warning: OMP (val): tsvd did NOT make any improvements! └ @ Main ~/.julia/packages/ACEfit/IRtHL/test/test_asp.jl:121 [ Info: All tests completed for ASP and OMP solvers. ERROR: LoadError: InitError: UndefVarError: `manifest_uuid_path` not defined in `Base` Suggestion: check for spelling errors or missing imports. Stacktrace:  [1] getproperty(x::Module, f::Symbol)  @ Base ./Base_compiler.jl:50  [2] _resolve_top_env(load_path::Any)  @ CondaPkg ~/.julia/packages/CondaPkg/0UqYV/src/resolve.jl:10  [3] resolve(; force::Bool, io::IO, interactive::Bool, dry_run::Bool)  @ CondaPkg ~/.julia/packages/CondaPkg/0UqYV/src/resolve.jl:823  [4] resolve()  @ CondaPkg ~/.julia/packages/CondaPkg/0UqYV/src/resolve.jl:796  [5] envdir()  @ CondaPkg ~/.julia/packages/CondaPkg/0UqYV/src/env.jl:70  [6] init_context()  @ PythonCall.C ~/.julia/packages/PythonCall/83z4q/src/C/context.jl:135  [7] __init__()  @ PythonCall.C ~/.julia/packages/PythonCall/83z4q/src/C/C.jl:26  [8] run_module_init(mod::Module, i::Int64)  @ Base ./loading.jl:1606  [9] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String)  @ Base ./loading.jl:1594  [10] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}; register::Bool)  @ Base ./loading.jl:1482  [11] _include_from_serialized  @ ./loading.jl:1439 [inlined]  [12] _require_search_from_serialized(pkg::Base.PkgId, sourcespec::Base.PkgLoadSpec, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String})  @ Base ./loading.jl:2314  [13] _require_search_from_serialized  @ ./loading.jl:2208 [inlined]  [14] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2865  [15] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2724  [16] macro expansion  @ ./loading.jl:2652 [inlined]  [17] macro expansion  @ ./lock.jl:376 [inlined]  [18] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2616  [19] require  @ ./loading.jl:2592 [inlined]  [20] eval_import_path  @ ./module.jl:36 [inlined]  [21] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [22] _eval_using  @ ./module.jl:137 [inlined]  [23] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [24] top-level scope  @ ~/.julia/packages/MLJScikitLearnInterface/xHP4R/src/ScikitLearnAPI.jl:5  [25] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:310  [26] top-level scope  @ ~/.julia/packages/MLJScikitLearnInterface/xHP4R/src/MLJScikitLearnInterface.jl:11  [27] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [28] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3308  [29] top-level scope  @ stdin:5  [30] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [31] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3150  [32] include_string  @ ./loading.jl:3160 [inlined]  [33] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [34] _start()  @ Base ./client.jl:585 during initialization of module C in expression starting at /home/pkgeval/.julia/packages/MLJScikitLearnInterface/xHP4R/src/ScikitLearnAPI.jl:3 in expression starting at /home/pkgeval/.julia/packages/MLJScikitLearnInterface/xHP4R/src/MLJScikitLearnInterface.jl:1 in expression starting at stdin:5 1 dependency had output during precompilation: ┌ MLJScikitLearnInterface │ [Output was shown above] └ MLJ Solvers: Error During Test at /home/pkgeval/.julia/packages/ACEfit/IRtHL/test/runtests.jl:13 Got exception outside of a @test LoadError: The following 1 package failed to precompile: MLJScikitLearnInterface Failed to precompile MLJScikitLearnInterface [5ae90465-5518-4432-b9d2-8a1def2f0cab] to "/home/pkgeval/.julia/compiled/v1.14/MLJScikitLearnInterface/jl_gEUOIW" (ProcessExited(1)). in expression starting at /home/pkgeval/.julia/packages/ACEfit/IRtHL/test/test_mlj.jl:4 Test Summary: | Pass Error Total Time ACEfit.jl | 37 2 39 8m02.6s Iterate | 0 1.9s Bayesian Linear | 3 3 15.1s Linear Solvers | 1 1 1m16.5s ASP | 34 34 2m07.2s MLJ Solvers | 1 1 4m21.6s RNG of the outermost testset: Xoshiro(0x7197d3547f9f8896, 0x5f133c219c79f588, 0xdf3f9ca22acb9ca7, 0x5ae16184afb006c8, 0x67394184f8d7a7e9) ERROR: LoadError: Some tests did not pass: 37 passed, 0 failed, 2 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/ACEfit/IRtHL/test/runtests.jl:4 Testing failed after 748.07s ERROR: LoadError: Package ACEfit errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3067 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2916 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:237 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:585 in expression starting at /PkgEval.jl/scripts/evaluate.jl:228 PkgEval failed after 812.37s: package fails to precompile