Package evaluation to test SCTransform on Julia 1.14.0-DEV.1372 (893635dc59*) started at 2025-12-16T18:31:37.832 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 6.76s ################################################################################ # Installation # Installing SCTransform... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [f56ea72b] + SCTransform v0.3.1 Updating `~/.julia/environments/v1.14/Manifest.toml` [47edcb42] + ADTypes v1.20.0 [7d9f7c33] + Accessors v0.1.43 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.22.0 [944b1d66] + CodecZlib v0.7.8 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.12 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [1a297f60] + FillArrays v1.15.0 [6a86dc24] + FiniteDiff v2.29.0 [f6369f11] + ForwardDiff v1.3.0 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [49dc5b4e] + KernelDensitySJ v0.2.2 [d3d80556] + LineSearches v7.5.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [429524aa] + Optim v1.13.3 [bac558e1] + OrderedCollections v1.8.1 [85a6dd25] + PositiveFactorizations v0.2.4 [21216c6a] + Preferences v1.5.0 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [ae029012] + Requires v1.3.1 [f2b01f46] + Roots v2.2.10 [f56ea72b] + SCTransform v0.3.1 [6c6a2e73] + Scratch v1.3.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [c5dd0088] + StableHashTraits v2.0.2 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.9 [856f2bd8] + StructTypes v1.11.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [3bb67fe8] + TranscodingStreams v0.11.3 [9d95972d] + TupleTools v1.6.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [56f22d72] + Artifacts v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [9fa8497b] + Future v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 Installation completed after 3.46s ################################################################################ # Precompilation # ERROR: LoadError: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Nothing) The function `setindex!` exists, but no method is defined for this combination of argument types. Stacktrace: [1] top-level scope @ /PkgEval.jl/scripts/precompile.jl:10 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [4] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/precompile.jl:6 caused by: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Base.DevNull) The function `setindex!` exists, but no method is defined for this combination of argument types. Stacktrace: [1] top-level scope @ /PkgEval.jl/scripts/precompile.jl:7 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [4] _start() @ Base ./client.jl:577 Precompilation failed after 9.33s ################################################################################ # Testing # Testing SCTransform ┌ Warning: Ignoring incompatible compat entry `SHA = "0.7"` in "/tmp/jl_L6InoN/Project.toml". │ SHA is a non-upgradable standard library with version 1.0.0 in the current Julia version. │ Fix by setting compat to "0.7, 1" to mark support of the current version 1.0.0. └ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:517 Status `/tmp/jl_L6InoN/Project.toml` [944b1d66] CodecZlib v0.7.8 [a93c6f00] DataFrames v1.8.1 [8bb1440f] DelimitedFiles v1.9.1 [49dc5b4e] KernelDensitySJ v0.2.2 [429524aa] Optim v1.13.3 [92933f4c] ProgressMeter v1.11.0 [f56ea72b] SCTransform v0.3.1 [6c6a2e73] Scratch v1.3.0 [eddce310] SingleCell10x v0.2.2 [276daf66] SpecialFunctions v2.6.1 [c5dd0088] StableHashTraits v2.0.2 [860ef19b] StableRNGs v1.0.4 [10745b16] Statistics v1.11.1 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [2f01184e] SparseArrays v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_L6InoN/Manifest.toml` [47edcb42] ADTypes v1.20.0 [7d9f7c33] Accessors v0.1.43 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [4fba245c] ArrayInterface v7.22.0 [944b1d66] CodecZlib v0.7.8 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.12 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.5 [1a297f60] FillArrays v1.15.0 [6a86dc24] FiniteDiff v2.29.0 [f6369f11] ForwardDiff v1.3.0 [f67ccb44] HDF5 v0.17.2 [842dd82b] InlineStrings v1.4.5 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [49dc5b4e] KernelDensitySJ v0.2.2 [b964fa9f] LaTeXStrings v1.4.0 [d3d80556] LineSearches v7.5.1 [2ab3a3ac] LogExpFunctions v0.3.29 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [d41bc354] NLSolversBase v7.10.0 [77ba4419] NaNMath v1.1.3 [429524aa] Optim v1.13.3 [bac558e1] OrderedCollections v1.8.1 [2dfb63ee] PooledArrays v1.4.3 [85a6dd25] PositiveFactorizations v0.2.4 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [08abe8d2] PrettyTables v3.1.2 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.3.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [f2b01f46] Roots v2.2.10 [f56ea72b] SCTransform v0.3.1 [6c6a2e73] Scratch v1.3.0 [91c51154] SentinelArrays v1.4.8 [efcf1570] Setfield v1.1.2 [eddce310] SingleCell10x v0.2.2 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.6.1 [c5dd0088] StableHashTraits v2.0.2 [860ef19b] StableRNGs v1.0.4 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.9 [892a3eda] StringManipulation v0.4.2 [856f2bd8] StructTypes v1.11.0 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [3bb67fe8] TranscodingStreams v0.11.3 [9d95972d] TupleTools v1.6.0 ⌅ [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.2+0 [94ce4f54] Libiconv_jll v1.18.0+0 [7cb0a576] MPICH_jll v4.3.2+0 [f1f71cc9] MPItrampoline_jll v5.5.4+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.9+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [a65dc6b1] Xorg_libpciaccess_jll v0.18.1+0 [477f73a3] libaec_jll v1.1.4+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.17.0+0 [e37daf67] LibGit2_jll v1.9.2+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Estimating sc parameters: 4%|█ | ETA: 0:02:44 Estimating sc parameters: 6%|█▌ | ETA: 0:01:57 Estimating sc parameters: 100%|█████████████████████████| Time: 0:00:07 Regularized: Test Failed at /home/pkgeval/.julia/packages/SCTransform/OgRBw/test/runtests.jl:115 Expression: ≈(preg.beta0, preg_ans2.beta0, norm = maxnorm, atol = 0.2) Evaluated: [-6.006485266168333, -2.460187145139168, -5.423359150746391, -6.36333968387152, -5.4879363323633825, -5.32426920185274, -7.796807560919887, -7.823321681383696, -7.823367807779296, -5.18899211981929 … -7.834398223694111, -7.787025109073769, -6.699618709558491, -6.209113450763867, -3.897959026002585, -6.740910353727425, -5.307016057649326, -5.622193904442096, -5.611753220129013, -7.807912158853374] ≈ [-6.00236595723811, -2.59916456409024, -5.44999123708493, -6.34307096203303, -5.51105849411454, -5.35619029874176, -7.80185766677111, -7.82248269134564, -7.80898791112667, -5.22824243132873 … -7.82684216302398, -7.79210362993775, -6.6674052192929, -6.19544451929233, -3.83925428538092, -6.5523382790553, -5.33990123746732, -5.63815038576103, -5.62827471737618, -7.80747690422806] (norm=maxnorm, atol=0.2) Stacktrace: [1] top-level scope @ ~/.julia/packages/SCTransform/OgRBw/test/runtests.jl:32 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [3] macro expansion @ ~/.julia/packages/SCTransform/OgRBw/test/runtests.jl:46 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [5] macro expansion @ ~/.julia/packages/SCTransform/OgRBw/test/runtests.jl:63 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2042 [inlined] [7] macro expansion @ ~/.julia/packages/SCTransform/OgRBw/test/runtests.jl:87 [inlined] [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [9] macro expansion @ ~/.julia/packages/SCTransform/OgRBw/test/runtests.jl:115 [inlined] [10] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:753 [inlined] [ Info: Bandwidth 0.2601508521793458 Regularized: Test Failed at /home/pkgeval/.julia/packages/SCTransform/OgRBw/test/runtests.jl:126 Expression: ≈(preg2.beta0, preg_ans2.beta0, norm = maxnorm, atol = 0.2) Evaluated: [-6.006485266168333, -2.460187145139168, -5.423359150746391, -6.36333968387152, -5.4879363323633825, -5.32426920185274, -7.796807560919887, -7.823321681383696, -7.823367807779296, -5.18899211981929 … -7.834398223694111, -7.787025109073769, -6.699618709558491, -6.209113450763867, -3.897959026002585, -6.740910353727425, -5.307016057649326, -5.622193904442096, -5.611753220129013, -7.807912158853374] ≈ [-6.00236595723811, -2.59916456409024, -5.44999123708493, -6.34307096203303, -5.51105849411454, -5.35619029874176, -7.80185766677111, -7.82248269134564, -7.80898791112667, -5.22824243132873 … -7.82684216302398, -7.79210362993775, -6.6674052192929, -6.19544451929233, -3.83925428538092, -6.5523382790553, -5.33990123746732, -5.63815038576103, -5.62827471737618, -7.80747690422806] (norm=maxnorm, atol=0.2) Stacktrace: [1] top-level scope @ ~/.julia/packages/SCTransform/OgRBw/test/runtests.jl:32 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [3] macro expansion @ ~/.julia/packages/SCTransform/OgRBw/test/runtests.jl:46 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [5] macro expansion @ ~/.julia/packages/SCTransform/OgRBw/test/runtests.jl:63 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2042 [inlined] [7] macro expansion @ ~/.julia/packages/SCTransform/OgRBw/test/runtests.jl:87 [inlined] [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [9] macro expansion @ ~/.julia/packages/SCTransform/OgRBw/test/runtests.jl:126 [inlined] [10] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:753 [inlined] Regularized: Test Failed at /home/pkgeval/.julia/packages/SCTransform/OgRBw/test/runtests.jl:115 Expression: ≈(preg.beta0, preg_ans2.beta0, norm = maxnorm, atol = 0.2) Evaluated: [-6.006485266168333, -2.460187145139168, -5.423359150746391, -6.36333968387152, -5.4879363323633825, -5.32426920185274, -7.796807560919887, -7.823321681383696, -7.823367807779296, -5.18899211981929 … -7.834398223694111, -7.787025109073769, -6.699618709558491, -6.209113450763867, -3.897959026002585, -6.740910353727425, -5.307016057649326, -5.622193904442096, -5.611753220129013, -7.807912158853374] ≈ [-6.00236595723811, -2.59916456409024, -5.44999123708493, -6.34307096203303, -5.51105849411454, -5.35619029874176, -7.80185766677111, -7.82248269134564, -7.80898791112667, -5.22824243132873 … -7.82684216302398, -7.79210362993775, -6.6674052192929, -6.19544451929233, -3.83925428538092, -6.5523382790553, -5.33990123746732, -5.63815038576103, -5.62827471737618, -7.80747690422806] (norm=maxnorm, atol=0.2) Stacktrace: [1] top-level scope @ ~/.julia/packages/SCTransform/OgRBw/test/runtests.jl:32 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [3] macro expansion @ ~/.julia/packages/SCTransform/OgRBw/test/runtests.jl:46 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [5] macro expansion @ ~/.julia/packages/SCTransform/OgRBw/test/runtests.jl:63 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2042 [inlined] [7] macro expansion @ ~/.julia/packages/SCTransform/OgRBw/test/runtests.jl:87 [inlined] [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [9] macro expansion @ ~/.julia/packages/SCTransform/OgRBw/test/runtests.jl:115 [inlined] [10] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:753 [inlined] [ Info: Bandwidth 0.2601508521793458 Regularized: Test Failed at /home/pkgeval/.julia/packages/SCTransform/OgRBw/test/runtests.jl:126 Expression: ≈(preg2.beta0, preg_ans2.beta0, norm = maxnorm, atol = 0.2) Evaluated: [-6.006485266168333, -2.460187145139168, -5.423359150746391, -6.36333968387152, -5.4879363323633825, -5.32426920185274, -7.796807560919887, -7.823321681383696, -7.823367807779296, -5.18899211981929 … -7.834398223694111, -7.787025109073769, -6.699618709558491, -6.209113450763867, -3.897959026002585, -6.740910353727425, -5.307016057649326, -5.622193904442096, -5.611753220129013, -7.807912158853374] ≈ [-6.00236595723811, -2.59916456409024, -5.44999123708493, -6.34307096203303, -5.51105849411454, -5.35619029874176, -7.80185766677111, -7.82248269134564, -7.80898791112667, -5.22824243132873 … -7.82684216302398, -7.79210362993775, -6.6674052192929, -6.19544451929233, -3.83925428538092, -6.5523382790553, -5.33990123746732, -5.63815038576103, -5.62827471737618, -7.80747690422806] (norm=maxnorm, atol=0.2) Stacktrace: [1] top-level scope @ ~/.julia/packages/SCTransform/OgRBw/test/runtests.jl:32 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [3] macro expansion @ ~/.julia/packages/SCTransform/OgRBw/test/runtests.jl:46 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [5] macro expansion @ ~/.julia/packages/SCTransform/OgRBw/test/runtests.jl:63 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2042 [inlined] [7] macro expansion @ ~/.julia/packages/SCTransform/OgRBw/test/runtests.jl:87 [inlined] [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [9] macro expansion @ ~/.julia/packages/SCTransform/OgRBw/test/runtests.jl:126 [inlined] [10] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:753 [inlined] [ Info: Bandwidth 0.2601508521793458 [ Info: Bandwidth 0.2601508521793458 [ Info: Bandwidth 0.2601508521793458 Test Summary: | Pass Fail Total Time SCTransform.jl | 69 4 73 1m15.1s logcellcounts | 3 3 4.6s 500_PBMC_50genes | 66 4 70 1m10.4s TableType=NamedTuple | 28 2 30 41.2s Non-regularized | 8 8 15.4s Regularized | 20 2 22 25.8s TableType=DataFrame | 28 2 30 7.5s Non-regularized | 8 8 3.1s Regularized | 20 2 22 4.4s sctransform | 6 6 2.9s feature_mask | 4 4 0.6s RNG of the outermost testset: Xoshiro(0x8b94052037fa3afb, 0xb29284d9c5e083ff, 0x001e2671acc2cf03, 0xc53f3ad7ec2930e5, 0x089cefcd5e8a284a) ERROR: LoadError: Some tests did not pass: 69 passed, 4 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/SCTransform/OgRBw/test/runtests.jl:31 Testing failed after 156.68s ERROR: LoadError: Package SCTransform errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3067 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2916 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:237 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:228 PkgEval failed after 197.58s: package has test failures