Package evaluation to test PkgCite on Julia 1.14.0-DEV.1372 (893635dc59*) started at 2025-12-16T16:30:08.237 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 9.74s ################################################################################ # Installation # Installing PkgCite... Resolving package versions... Installed Compat ───────────── v4.18.1 Installed IniFile ──────────── v0.5.1 Installed OrderedCollections ─ v1.8.1 Installed URIs ─────────────── v1.6.1 Installed BibParser ────────── v0.2.2 Installed DataStructures ───── v0.18.22 Installed JSONSchema ───────── v1.5.0 Installed PrecompileTools ──── v1.3.3 Installed StringEncodings ──── v0.3.7 Installed BibInternal ──────── v0.3.7 Installed MbedTLS ──────────── v1.1.9 Installed Requires ─────────── v1.3.1 Installed StructUtils ──────── v2.6.0 Installed HTTP ─────────────── v0.9.17 Installed YAML ─────────────── v0.4.16 Installed Parsers ──────────── v2.8.3 Installed TestItems ────────── v1.0.0 Installed FileIO ───────────── v1.16.5 Installed JLLWrappers ──────── v1.7.1 Installed Preferences ──────── v1.5.0 Installed Bibliography ─────── v0.2.20 Installed JSON ─────────────── v1.3.0 Installed PkgCite ──────────── v0.1.3 Installed Libiconv_jll ─────── v1.18.0+0 Installed MbedTLS_jll ──────── v2.28.1010+0 Installing 2 artifacts Installed artifact Libiconv 1.9 MiB Installed artifact MbedTLS 2.2 MiB Updating `~/.julia/environments/v1.14/Project.toml` [50d0efc5] + PkgCite v0.1.3 Updating `~/.julia/environments/v1.14/Manifest.toml` [2027ae74] + BibInternal v0.3.7 [13533e5b] + BibParser v0.2.2 ⌅ [f1be7e48] + Bibliography v0.2.20 [34da2185] + Compat v4.18.1 ⌅ [864edb3b] + DataStructures v0.18.22 ⌃ [5789e2e9] + FileIO v1.16.5 ⌅ [cd3eb016] + HTTP v0.9.17 [83e8ac13] + IniFile v0.5.1 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v1.3.0 [7d188eb4] + JSONSchema v1.5.0 [739be429] + MbedTLS v1.1.9 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [50d0efc5] + PkgCite v0.1.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [ae029012] + Requires v1.3.1 [69024149] + StringEncodings v0.3.7 [ec057cc2] + StructUtils v2.6.0 [1c621080] + TestItems v1.0.0 [5c2747f8] + URIs v1.6.1 [ddb6d928] + YAML v0.4.16 [94ce4f54] + Libiconv_jll v1.18.0+0 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [6462fe0b] + Sockets v1.11.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.17.0+0 [e37daf67] + LibGit2_jll v1.9.2+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.12.2 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 7.25s ################################################################################ # Precompilation # ERROR: LoadError: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Nothing) The function `setindex!` exists, but no method is defined for this combination of argument types. Stacktrace: [1] top-level scope @ /PkgEval.jl/scripts/precompile.jl:10 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [4] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/precompile.jl:6 caused by: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Base.DevNull) The function `setindex!` exists, but no method is defined for this combination of argument types. Stacktrace: [1] top-level scope @ /PkgEval.jl/scripts/precompile.jl:7 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [4] _start() @ Base ./client.jl:577 Precompilation failed after 12.14s ################################################################################ # Testing # Testing PkgCite Status `/tmp/jl_ijAJ8p/Project.toml` [13533e5b] BibParser v0.2.2 ⌅ [f1be7e48] Bibliography v0.2.20 ⌅ [864edb3b] DataStructures v0.18.22 ⌅ [cd3eb016] HTTP v0.9.17 [50d0efc5] PkgCite v0.1.3 [b77e0a4c] InteractiveUtils v1.11.0 [44cfe95a] Pkg v1.14.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_ijAJ8p/Manifest.toml` [2027ae74] BibInternal v0.3.7 [13533e5b] BibParser v0.2.2 ⌅ [f1be7e48] Bibliography v0.2.20 [34da2185] Compat v4.18.1 ⌅ [864edb3b] DataStructures v0.18.22 ⌃ [5789e2e9] FileIO v1.16.5 ⌅ [cd3eb016] HTTP v0.9.17 [83e8ac13] IniFile v0.5.1 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.3.0 [7d188eb4] JSONSchema v1.5.0 [739be429] MbedTLS v1.1.9 [bac558e1] OrderedCollections v1.8.1 [69de0a69] Parsers v2.8.3 [50d0efc5] PkgCite v0.1.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [ae029012] Requires v1.3.1 [69024149] StringEncodings v0.3.7 [ec057cc2] StructUtils v2.6.0 [1c621080] TestItems v1.0.0 [5c2747f8] URIs v1.6.1 [ddb6d928] YAML v0.4.16 [94ce4f54] Libiconv_jll v1.18.0+0 [c8ffd9c3] MbedTLS_jll v2.28.1010+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [f489334b] StyledStrings v1.13.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.17.0+0 [e37daf67] LibGit2_jll v1.9.2+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.12.2 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Activating project at `~/.julia/packages/PkgCite/4M5Zw/test/test_env` ┌ Warning: The active manifest file is an older format with no julia version entry. Dependencies may have been resolved with a different julia version. └ @ ~/.julia/packages/PkgCite/4M5Zw/test/test_env/Manifest.toml:0 Installed CommonSolve ───────────────── v0.2.0 Installed Rmath_jll ─────────────────── v0.3.0+0 Installed EllipsisNotation ──────────── v1.1.0 Installed Formatting ────────────────── v0.4.2 Installed FillArrays ────────────────── v0.12.1 Installed AbstractTrees ─────────────── v0.3.4 Installed MacroTools ────────────────── v0.5.7 Installed DataStructures ────────────── v0.18.9 Installed ConstructionBase ──────────── v1.3.0 Installed LabelledArrays ────────────── v1.6.4 Installed RuntimeGeneratedFunctions ─── v0.5.3 Installed ExprTools ─────────────────── v0.1.6 Installed StatsBase ─────────────────── v0.33.9 Installed DynamicPolynomials ────────── v0.3.19 Installed ArrayInterface ────────────── v3.1.23 Installed OrderedCollections ────────── v1.4.1 Installed Combinatorics ─────────────── v1.0.2 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed SymbolicUtils ─────────────── v0.13.3 Installed DataValueInterfaces ───────── v1.0.0 Installed Compat ────────────────────── v3.32.0 Installed RecipesBase ───────────────── v1.1.1 Installed StatsAPI ──────────────────── v1.0.0 Installed TimerOutputs ──────────────── v0.5.12 Installed DataAPI ───────────────────── v1.7.0 Installed MultivariatePolynomials ───── v0.3.18 Installed DomainSets ────────────────── v0.5.2 Installed StaticArrays ──────────────── v1.2.12 Installed ChainRulesCore ────────────── v1.3.0 Installed QuadGK ────────────────────── v2.4.1 Installed NaNMath ───────────────────── v0.3.5 Installed OpenSpecFun_jll ───────────── v0.5.5+0 Installed Latexify ──────────────────── v0.15.6 Installed Requires ──────────────────── v1.1.3 Installed Symbolics ─────────────────── v2.1.0 Installed Rmath ─────────────────────── v0.7.0 Installed IfElse ────────────────────── v0.1.0 Installed StatsFuns ─────────────────── v0.9.8 Installed DiffRules ─────────────────── v1.2.1 Installed TreeViews ─────────────────── v0.3.0 Installed LogExpFunctions ───────────── v0.2.5 Installed SciMLBase ─────────────────── v1.18.4 Installed Tables ────────────────────── v1.5.0 Installed IntervalSets ──────────────── v0.5.3 Installed SpecialFunctions ──────────── v1.6.0 Installed Missings ──────────────────── v1.0.0 Installed Reexport ──────────────────── v1.1.0 Installed Setfield ──────────────────── v0.7.1 Installed MutableArithmetics ────────── v0.2.20 Installed Preferences ───────────────── v1.2.2 Installed SortingAlgorithms ─────────── v1.0.1 Installed LaTeXStrings ──────────────── v1.2.1 Installed TableTraits ───────────────── v1.0.1 Installed Static ────────────────────── v0.3.0 Installed JLLWrappers ───────────────── v1.3.0 Installed CompositeTypes ────────────── v0.1.2 Installed ZygoteRules ───────────────── v0.2.1 Installed Distributions ─────────────── v0.25.11 Installed PDMats ────────────────────── v0.11.1 Installed RecursiveArrayTools ───────── v2.17.0 Installed DocStringExtensions ───────── v0.8.5 Installing 2 artifacts Installed artifact Rmath 116.5 KiB Installed artifact OpenSpecFun 212.1 KiB Status `~/.julia/packages/PkgCite/4M5Zw/test/test_env/Project.toml` ⌃ [0c5d862f] Symbolics v2.1.0 Info Packages marked with ⌃ have new versions available and may be upgradable. PkgCite.jl: Error During Test at /home/pkgeval/.julia/packages/PkgCite/4M5Zw/test/runtests.jl:10 Got exception outside of a @test could not find source path for package `MbedTLS_jll [c8ffd9c3]` based on /home/pkgeval/.julia/packages/PkgCite/4M5Zw/test/test_env/Manifest.toml Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] package_info(env::Pkg.Types.EnvCache, pkg::Pkg.Types.PackageSpec, entry::Pkg.Types.PackageEntry) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:71 [3] package_info(env::Pkg.Types.EnvCache, pkg::Pkg.Types.PackageSpec) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:61 [4] #dependencies##0 @ ./none:-1 [inlined] [5] iterate @ ./generator.jl:48 [inlined] [6] Dict{Base.UUID, Pkg.API.PackageInfo}(kv::Base.Generator{Vector{Pkg.Types.PackageSpec}, Pkg.API.var"#dependencies##0#dependencies##1"{Pkg.Types.EnvCache}}) @ Base ./dict.jl:95 [7] dict_with_eltype @ ./abstractdict.jl:634 [inlined] [8] dict_with_eltype @ ./abstractdict.jl:641 [inlined] [9] Dict @ ./dict.jl:117 [inlined] [10] dependencies @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:93 [inlined] [11] dependencies @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:90 [inlined] [12] collect_citations(only_direct::Bool; badge::Bool) @ PkgCite ~/.julia/packages/PkgCite/4M5Zw/src/citations.jl:43 [13] collect_citations(only_direct::Bool) @ PkgCite ~/.julia/packages/PkgCite/4M5Zw/src/citations.jl:41 [14] top-level scope @ ~/.julia/packages/PkgCite/4M5Zw/test/runtests.jl:11 [15] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [16] macro expansion @ ~/.julia/packages/PkgCite/4M5Zw/test/runtests.jl:20 [inlined] [17] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [18] top-level scope @ none:6 [19] eval(m::Module, e::Any) @ Core ./boot.jl:489 [20] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [21] _start() @ Base ./client.jl:577 Test Summary: | Pass Error Total Time PkgCite.jl | 1 1 2 35.1s Empty env | 1 1 8.7s RNG of the outermost testset: Random.Xoshiro(0x5fcf1729ae494386, 0x02cd78b07cf83c72, 0xc0df10f6e6e27c06, 0xbcac0d6cdefe4941, 0x55473407c09265c1) ERROR: LoadError: Some tests did not pass: 1 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/PkgCite/4M5Zw/test/runtests.jl:10 Testing failed after 126.41s ERROR: LoadError: Package PkgCite errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3067 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2916 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:237 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:228 PkgEval failed after 172.43s: package tests unexpectedly errored