Package evaluation to test PDMats on Julia 1.14.0-DEV.1372 (893635dc59*) started at 2025-12-16T12:38:08.092 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 9.37s ################################################################################ # Installation # Installing PDMats... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [90014a1f] + PDMats v0.11.36 Updating `~/.julia/environments/v1.14/Manifest.toml` [90014a1f] + PDMats v0.11.36 [56f22d72] + Artifacts v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.13.0 [4607b0f0] + SuiteSparse [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Installation completed after 0.9s ################################################################################ # Precompilation # ERROR: LoadError: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Nothing) The function `setindex!` exists, but no method is defined for this combination of argument types. Stacktrace: [1] top-level scope @ /PkgEval.jl/scripts/precompile.jl:10 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [4] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/precompile.jl:6 caused by: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Base.DevNull) The function `setindex!` exists, but no method is defined for this combination of argument types. Stacktrace: [1] top-level scope @ /PkgEval.jl/scripts/precompile.jl:7 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [4] _start() @ Base ./client.jl:577 Precompilation failed after 13.34s ################################################################################ # Testing # Testing PDMats Status `/tmp/jl_wq6rYg/Project.toml` [aae01518] BandedMatrices v1.10.2 [26cc04aa] FiniteDifferences v0.12.33 [f6369f11] ForwardDiff v1.3.0 [90014a1f] PDMats v0.11.36 [90137ffa] StaticArrays v1.9.15 [2913bbd2] StatsBase v0.34.9 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.13.0 [4607b0f0] SuiteSparse [8dfed614] Test v1.11.0 Status `/tmp/jl_wq6rYg/Manifest.toml` [66dad0bd] AliasTables v1.1.3 [4c555306] ArrayLayouts v1.12.2 [aae01518] BandedMatrices v1.10.2 [d360d2e6] ChainRulesCore v1.26.0 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.3 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [ffbed154] DocStringExtensions v0.9.5 [1a297f60] FillArrays v1.15.0 [26cc04aa] FiniteDifferences v0.12.33 [f6369f11] ForwardDiff v1.3.0 [92d709cd] IrrationalConstants v0.2.6 [692b3bcd] JLLWrappers v1.7.1 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [77ba4419] NaNMath v1.1.3 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.36 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [43287f4e] PtrArrays v1.3.0 [708f8203] Richardson v1.4.2 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.6.1 [90137ffa] StaticArrays v1.9.15 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.9 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [8e850b90] libblastrampoline_jll v5.15.0+0 Testing Running tests... Running tests ... * pdmtypes Testing PDMat{Float64, Matrix{Float64}} of size (3, 3) Testing PDMat{Float64, Matrix{Float64}} of size (3, 3) Testing PDMat{Float64, Matrix{Float64}} of size (3, 3) Testing PDMat{Float64, Matrix{Float64}} of size (3, 3) Testing PDMat{Float64, Matrix{Float64}} of size (3, 3) Testing PDMat{Float64, Matrix{Float64}} of size (3, 3) Testing PDMat{Float64, Matrix{Float64}} of size (3, 3) Testing PDMat{Float64, Matrix{Float64}} of size (3, 3) Testing PDMat{Float64, Matrix{Float64}} of size (3, 3) Testing PDiagMat{Float64, Vector{Float64}} of size (3, 3) Testing ScalMat{Float64} of size (3, 3) Testing PDSparseMat{Float64, SparseMatrixCSC{Float64, Int64}} of size (3, 3) Testing PDMat{Float32, Matrix{Float32}} of size (3, 3) Testing PDMat{Float64, Matrix{Float64}} of size (3, 3) Testing PDMat{Float64, Matrix{Float64}} of size (3, 3) Testing PDMat{Float32, Matrix{Float32}} of size (3, 3) Testing PDMat{Float64, Matrix{Float64}} of size (3, 3) Testing PDMat{Float64, Matrix{Float64}} of size (3, 3) Testing PDMat{Float32, Matrix{Float32}} of size (3, 3) Testing PDMat{Float64, Matrix{Float64}} of size (3, 3) Testing PDMat{Float64, Matrix{Float64}} of size (3, 3) Testing PDiagMat{Float32, Vector{Float32}} of size (3, 3) Testing ScalMat{Float32} of size (3, 3) Testing PDSparseMat{Float32, SparseMatrixCSC{Float32, Int64}} of size (3, 3) Testing PDMat{Float64, Matrix{Float64}} of size (0, 0) .. testing dim .. testing size .. testing ndims .. testing length .. testing eltype .. testing index .. testing isposdef .. testing ishermitian .. testing AbstractPDMat .. testing Matrix .. testing full .. testing diag .. testing cholesky .. testing scale .. testing add .. testing add_scal .. testing add_scal! .. testing det .. testing logdet .. testing multiply .. testing divide .. testing quad .. testing invquad .. testing X_A_Xt .. testing Xt_A_X .. testing X_invA_Xt .. testing Xt_invA_X .. testing whiten .. testing whiten! .. testing invwhiten .. testing invwhiten! .. testing unwhiten .. testing unwhiten! .. testing invunwhiten .. testing invunwhiten! .. testing whiten-unwhiten .. testing invwhiten-invunwhiten Testing PDiagMat{Float64, Vector{Float64}} of size (0, 0) .. testing dim .. testing size .. testing ndims .. testing length .. testing eltype .. testing index .. testing isposdef .. testing ishermitian .. testing AbstractPDMat .. testing Matrix .. testing full .. testing diag .. testing cholesky .. testing scale .. testing add .. testing add_scal .. testing add_scal! .. testing det .. testing logdet .. testing multiply .. testing divide .. testing quad .. testing invquad .. testing X_A_Xt .. testing Xt_A_X .. testing X_invA_Xt .. testing Xt_invA_X .. testing whiten .. testing whiten! .. testing invwhiten .. testing invwhiten! .. testing unwhiten .. testing unwhiten! .. testing invunwhiten .. testing invunwhiten! .. testing whiten-unwhiten .. testing invwhiten-invunwhiten Test Summary: | Pass Broken Total Time pd matrix types | 3907 2 3909 2m43.2s * abstracttypes Testing Matrix{Float64} of size (3, 3) .. testing dim .. testing size .. testing ndims .. testing length .. testing eltype .. testing index .. testing isposdef .. testing ishermitian .. testing AbstractPDMat .. testing Matrix .. testing full .. testing quad .. testing invquad .. testing whiten .. testing whiten! .. testing invwhiten .. testing invwhiten! .. testing unwhiten .. testing unwhiten! .. testing invunwhiten .. testing invunwhiten! .. testing whiten-unwhiten .. testing invwhiten-invunwhiten Test Summary: | Pass Total Time AbstractMatrix fallback functionality | 73 73 7.3s * addition Testing addition with eltype = Float64 Testing addition with eltype = Float32 Test Summary: | Pass Broken Total Time addition | 284 14 298 14.5s * congruence Test Summary: | Pass Total Time Congruency transforms with PD return values | 256 256 13.6s * generics Testing scalar multiplication Test Summary: | Pass Total Time scalar multiplication | 12 12 0.8s * kron Test Summary: | Pass Total Time Kronecker product | 72 72 12.8s * chol Test Summary: | Pass Total Time chol_lower and chol_upper | 973 973 8.0s * specialarrays ┌ Warning: The call to compilecache failed to create a usable precompiled cache file for BandedMatrices [aae01518-5342-5314-be14-df237901396f] │ exception = Required dependency Base.PkgId(Base.UUID("21216c6a-2e73-6563-6e65-726566657250"), "Preferences") failed to load from a cache file. └ @ Base loading.jl:2891 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("aae01518-5342-5314-be14-df237901396f"), "BandedMatrices") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2813  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2665  [4] macro expansion  @ ./loading.jl:2593 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2557  [7] require  @ ./loading.jl:2533 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_using  @ ./module.jl:137 [inlined]  [11] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [12] top-level scope  @ ~/.julia/packages/BandedMatrices/r7Ze0/ext/BandedMatricesSparseArraysExt.jl:3  [13] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3250  [15] top-level scope  @ stdin:5  [16] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3092  [18] include_string  @ ./loading.jl:3102 [inlined]  [19] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [20] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/BandedMatrices/r7Ze0/ext/BandedMatricesSparseArraysExt.jl:1 in expression starting at stdin:5 1 dependency had output during precompilation: ┌ BandedMatrices → BandedMatricesSparseArraysExt │ [Output was shown above] └ ┌ Error: Error during loading of extension BandedMatricesSparseArraysExt of BandedMatrices, use `Base.retry_load_extensions()` to retry. │ exception = │ 1-element ExceptionStack: │ The following 1 package failed to precompile: │ │ BandedMatricesSparseArraysExt │ Failed to precompile BandedMatricesSparseArraysExt [fda1b50a-8ac0-5268-9aec-b1d147a8883f] to "/home/pkgeval/.julia/compiled/v1.14/BandedMatricesSparseArraysExt/jl_mZCzKn" (ProcessExited(1)). │ └ @ Base loading.jl:1721 Test Summary: | Pass Broken Total Time Special matrix types | 170 4 174 30.0s * sqrt Test Summary: | Pass Total Time Matrix square root | 32 32 59.4s * ad Test Summary: | Pass Total Time PDMat: (un)whiten | 6 6 26.5s * ext/statsbase Test Summary: | Pass Total Time cor2cov | 36 36 4.6s Test Summary: | Pass Total Time cov2cor | 72 72 6.8s Testing PDMats tests passed Testing completed after 519.64s PkgEval succeeded after 556.96s